BLASTX nr result
ID: Atropa21_contig00031381
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00031381
(1030 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV su... 578 e-163
ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV su... 578 e-163
ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D sub... 577 e-162
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope... 577 e-162
ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 359 9e-97
gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum ma... 348 3e-93
emb|CBI34757.3| unnamed protein product [Vitis vinifera] 342 2e-91
gb|EMJ12114.1| hypothetical protein PRUPE_ppa000278mg [Prunus pe... 341 2e-91
gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, pu... 336 8e-90
gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlise... 335 2e-89
emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera] 331 3e-88
ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D sub... 330 7e-88
ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricin... 329 1e-87
ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D sub... 326 1e-86
ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citr... 322 1e-85
ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV su... 322 2e-85
ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV su... 322 2e-85
ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Me... 319 1e-84
ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV su... 317 6e-84
gb|ESW30447.1| hypothetical protein PHAVU_002G153700g [Phaseolus... 316 1e-83
>ref|XP_006358859.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Solanum tuberosum]
Length = 1233
Score = 578 bits (1491), Expect = e-163
Identities = 291/338 (86%), Positives = 307/338 (90%), Gaps = 1/338 (0%)
Frame = +1
Query: 19 SHAIGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGEKTASLF 198
+HAIGGHPVG LDQPVSAL SSPLLNLKKIL++G GSRSGEKTAS+F
Sbjct: 657 NHAIGGHPVGSLAACAISEAAYSALDQPVSALESSPLLNLKKILESGAGSRSGEKTASMF 716
Query: 199 LSKRLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHSSPWVCHFHIDK 378
LSKRLGRWAHGFEYGALEVKGHLERLLLS+VVSTVMICFSPETRKSTH+ PWVCHFHIDK
Sbjct: 717 LSKRLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTHNCPWVCHFHIDK 776
Query: 379 ENVKTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHITCKDFSVADVRKEDSKIYITVAV 558
ENVKTRRLKLRS+LDALNMRY AA K GN+LPNLHITCKD SVA+ RKE S+I ITV+V
Sbjct: 777 ENVKTRRLKLRSILDALNMRYRAATTKGGNDLPNLHITCKDCSVAEARKEKSEICITVSV 836
Query: 559 VETSKD-SSHLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSIGELYLQ 735
VETSKD SS LDTLRD+VIPFLLETVIKGFSAFKKVDILW+ELPS SKSSRGS GELYLQ
Sbjct: 837 VETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGSTGELYLQ 896
Query: 736 VFMSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWEYFLCKLHSA 915
VFMSESCDRIKFWNALVDSCLQIRDLIDWERS+PDD+HDLTVAYGIDVAWEYFLCKLHSA
Sbjct: 897 VFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSA 956
Query: 916 VSETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
VSETGKKILPEHLVLAAD TATGEFVPLSAKGLT+QR
Sbjct: 957 VSETGKKILPEHLVLAADSLTATGEFVPLSAKGLTLQR 994
>ref|XP_006358858.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Solanum tuberosum]
Length = 1446
Score = 578 bits (1491), Expect = e-163
Identities = 291/338 (86%), Positives = 307/338 (90%), Gaps = 1/338 (0%)
Frame = +1
Query: 19 SHAIGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGEKTASLF 198
+HAIGGHPVG LDQPVSAL SSPLLNLKKIL++G GSRSGEKTAS+F
Sbjct: 870 NHAIGGHPVGSLAACAISEAAYSALDQPVSALESSPLLNLKKILESGAGSRSGEKTASMF 929
Query: 199 LSKRLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHSSPWVCHFHIDK 378
LSKRLGRWAHGFEYGALEVKGHLERLLLS+VVSTVMICFSPETRKSTH+ PWVCHFHIDK
Sbjct: 930 LSKRLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTHNCPWVCHFHIDK 989
Query: 379 ENVKTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHITCKDFSVADVRKEDSKIYITVAV 558
ENVKTRRLKLRS+LDALNMRY AA K GN+LPNLHITCKD SVA+ RKE S+I ITV+V
Sbjct: 990 ENVKTRRLKLRSILDALNMRYRAATTKGGNDLPNLHITCKDCSVAEARKEKSEICITVSV 1049
Query: 559 VETSKD-SSHLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSIGELYLQ 735
VETSKD SS LDTLRD+VIPFLLETVIKGFSAFKKVDILW+ELPS SKSSRGS GELYLQ
Sbjct: 1050 VETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGSTGELYLQ 1109
Query: 736 VFMSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWEYFLCKLHSA 915
VFMSESCDRIKFWNALVDSCLQIRDLIDWERS+PDD+HDLTVAYGIDVAWEYFLCKLHSA
Sbjct: 1110 VFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFLCKLHSA 1169
Query: 916 VSETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
VSETGKKILPEHLVLAAD TATGEFVPLSAKGLT+QR
Sbjct: 1170 VSETGKKILPEHLVLAADSLTATGEFVPLSAKGLTLQR 1207
>ref|XP_004245657.1| PREDICTED: DNA-directed RNA polymerase D subunit 1 [Solanum
lycopersicum]
Length = 1446
Score = 577 bits (1486), Expect = e-162
Identities = 292/344 (84%), Positives = 310/344 (90%), Gaps = 1/344 (0%)
Frame = +1
Query: 1 EADQIVSHAIGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGE 180
EA + +HAIGGHPVG LDQPVSAL SSPLLNLKKIL++G GSR+GE
Sbjct: 864 EALESHNHAIGGHPVGSLAACAISEAAYCALDQPVSALESSPLLNLKKILESGAGSRTGE 923
Query: 181 KTASLFLSKRLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHSSPWVC 360
KTAS+FLSKRLGRWAHGFEYGALEVKGHLERLLLS+VVSTVMICFSPETRKSTH+ PWVC
Sbjct: 924 KTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTHNCPWVC 983
Query: 361 HFHIDKENVKTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHITCKDFSVADVRKEDSKI 540
HFHIDKENVKTRRLKLRSVLDALNMRY AA KAGN+LPNLHITCKD SVA+V+KE S+I
Sbjct: 984 HFHIDKENVKTRRLKLRSVLDALNMRYRAATTKAGNDLPNLHITCKDCSVAEVQKEKSEI 1043
Query: 541 YITVAVVETSKD-SSHLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSI 717
ITV+VVETSKD SS LDTLRD+VIPFLLETVIKGFSAFKKVDILW+ELPS SKSSRG
Sbjct: 1044 CITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGPT 1103
Query: 718 GELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWEYFL 897
GELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERS+PDD+HDLTVAYGIDVAWEYFL
Sbjct: 1104 GELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFL 1163
Query: 898 CKLHSAVSETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
CKLHSAVSETGKKILPEHLVLAAD T TGEFVPLSAKGLT+QR
Sbjct: 1164 CKLHSAVSETGKKILPEHLVLAADSLTTTGEFVPLSAKGLTLQR 1207
>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
Length = 1138
Score = 577 bits (1486), Expect = e-162
Identities = 292/344 (84%), Positives = 310/344 (90%), Gaps = 1/344 (0%)
Frame = +1
Query: 1 EADQIVSHAIGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGE 180
EA + +HAIGGHPVG LDQPVSAL SSPLLNLKKIL++G GSR+GE
Sbjct: 556 EALESHNHAIGGHPVGSLAACAISEAAYCALDQPVSALESSPLLNLKKILESGAGSRTGE 615
Query: 181 KTASLFLSKRLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHSSPWVC 360
KTAS+FLSKRLGRWAHGFEYGALEVKGHLERLLLS+VVSTVMICFSPETRKSTH+ PWVC
Sbjct: 616 KTASMFLSKRLGRWAHGFEYGALEVKGHLERLLLSEVVSTVMICFSPETRKSTHNCPWVC 675
Query: 361 HFHIDKENVKTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHITCKDFSVADVRKEDSKI 540
HFHIDKENVKTRRLKLRSVLDALNMRY AA KAGN+LPNLHITCKD SVA+V+KE S+I
Sbjct: 676 HFHIDKENVKTRRLKLRSVLDALNMRYRAATTKAGNDLPNLHITCKDCSVAEVQKEKSEI 735
Query: 541 YITVAVVETSKD-SSHLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSI 717
ITV+VVETSKD SS LDTLRD+VIPFLLETVIKGFSAFKKVDILW+ELPS SKSSRG
Sbjct: 736 CITVSVVETSKDPSSLLDTLRDVVIPFLLETVIKGFSAFKKVDILWKELPSPSKSSRGPT 795
Query: 718 GELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWEYFL 897
GELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERS+PDD+HDLTVAYGIDVAWEYFL
Sbjct: 796 GELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSYPDDVHDLTVAYGIDVAWEYFL 855
Query: 898 CKLHSAVSETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
CKLHSAVSETGKKILPEHLVLAAD T TGEFVPLSAKGLT+QR
Sbjct: 856 CKLHSAVSETGKKILPEHLVLAADSLTTTGEFVPLSAKGLTLQR 899
>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
1-like [Vitis vinifera]
Length = 1560
Score = 359 bits (922), Expect = 9e-97
Identities = 182/338 (53%), Positives = 235/338 (69%), Gaps = 1/338 (0%)
Frame = +1
Query: 19 SHAIGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGEKTASLF 198
++ +GG PVG LDQP+S L SPLLNLK++L+ G+ + ++T SLF
Sbjct: 913 AYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGLRKSTADRTVSLF 972
Query: 199 LSKRLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHSSPWVCHFHIDK 378
LSK+L + HGFEYGALEVK HLE+LL SD+VSTVMI FSP+ TH SPWVCHFH+ +
Sbjct: 973 LSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSKTHFSPWVCHFHVCE 1032
Query: 379 ENVKTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHITCKDFSVADVRKEDSKIY-ITVA 555
E K R LK S++DAL M+ +A+ ++ NLP+L IT KD V D+ KEDS + ITV+
Sbjct: 1033 EIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDCFV-DMEKEDSDCFCITVS 1091
Query: 556 VVETSKDSSHLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSIGELYLQ 735
+V + K LDT+RDLVIPFLL V+KG KKVDILW + P S + S G LYL+
Sbjct: 1092 IVNSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVDILWNDNPD-SDVLKSSSGRLYLR 1150
Query: 736 VFMSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWEYFLCKLHSA 915
V++S C + FW L+D+CLQI D+IDWERSHPD+IHD+ V YGID W+YFL L SA
Sbjct: 1151 VYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWKYFLNSLKSA 1210
Query: 916 VSETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
+S+ GK +LPEHL+L A C +ATGEFV L+AKG+ Q+
Sbjct: 1211 ISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQK 1248
>gb|AAY89361.1| RNA polymerase IV largest subunit [Antirrhinum majus]
Length = 1112
Score = 348 bits (892), Expect = 3e-93
Identities = 186/343 (54%), Positives = 232/343 (67%), Gaps = 9/343 (2%)
Frame = +1
Query: 28 IGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGEKTASLFLSK 207
+GGHPVG LDQPVSAL SPL+ LKK+LD GV + +G K+ASLFLS+
Sbjct: 555 MGGHPVGSLAACAISEAAYSALDQPVSALEPSPLIALKKVLDCGVKNNTGGKSASLFLSR 614
Query: 208 RLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHSSPWVCHFHIDKENV 387
RLG+W +GFE+GALEVK H+E LL S+VVS V I FS E R T+ SPWVC+F I+KE
Sbjct: 615 RLGKWVNGFEFGALEVKDHMESLLFSEVVSEVTISFSTERR--TNISPWVCNFCINKEVF 672
Query: 388 KTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHITCKDFSVADVRKEDSKIYITVAVVET 567
R LKL SV+ L A K LPNL I KD S AD ++ S+I I+VAV +
Sbjct: 673 MKRNLKLESVVHTLRANCNATPKKMKLKLPNLLIENKDCSEADFHEDSSRICISVAVSQN 732
Query: 568 SKDSSH---------LDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSIG 720
+ H LD LR++VIP LL TV+KGF FKKVDILW++ S S+ S+ S G
Sbjct: 733 ELSNLHFGSLKEYEILDYLRNMVIPVLLRTVVKGFPEFKKVDILWKDEQSRSRFSKCSSG 792
Query: 721 ELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWEYFLC 900
E Y++VFMSE+C+R +FWN LV+ L+IR LIDW+RSHPDD+HD A+GID AW F+
Sbjct: 793 EPYVRVFMSENCERARFWNILVEKSLRIRSLIDWDRSHPDDVHDYGEAFGIDTAWMCFVN 852
Query: 901 KLHSAVSETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
L+SA+SETGK ILPEHL+ A+C + TGEFV L+AKGL QR
Sbjct: 853 SLNSAISETGKTILPEHLIATANCLSMTGEFVSLNAKGLAQQR 895
>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
Length = 1359
Score = 342 bits (876), Expect = 2e-91
Identities = 176/338 (52%), Positives = 229/338 (67%), Gaps = 1/338 (0%)
Frame = +1
Query: 19 SHAIGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGEKTASLF 198
++ +GG PVG LDQP+S L SPLLNLK++L+ G+ + ++T SLF
Sbjct: 782 AYDMGGQPVGSISACAISEAAYSALDQPISLLEPSPLLNLKRVLECGLRKSTADRTVSLF 841
Query: 199 LSKRLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHSSPWVCHFHIDK 378
LSK+L + HGFEYGALEVK HLE+LL SD+VSTVMI FSP+ TH SPWVCHFH+ +
Sbjct: 842 LSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMIVFSPQNGSKTHFSPWVCHFHVCE 901
Query: 379 ENVKTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHITCKDFSVADVRKEDSKIY-ITVA 555
E K R LK S++DAL M+ +A+ ++ NLP+L IT KD V D+ KEDS + ITV+
Sbjct: 902 EIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQITSKDCFV-DMEKEDSDCFCITVS 960
Query: 556 VVETSKDSSHLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSIGELYLQ 735
+V + K LDT+RDLVIPFLL V+KG K D+L + S G LYL+
Sbjct: 961 IVNSKKSCIQLDTVRDLVIPFLLGAVVKG-CCIKNSDVL-----------KSSSGRLYLR 1008
Query: 736 VFMSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWEYFLCKLHSA 915
V++S C + FW L+D+CLQI D+IDWERSHPD+IHD+ V YGID W+YFL L SA
Sbjct: 1009 VYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNIHDIFVVYGIDAGWKYFLNSLKSA 1068
Query: 916 VSETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
+S+ GK +LPEHL+L A C +ATGEFV L+AKG+ Q+
Sbjct: 1069 ISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQK 1106
>gb|EMJ12114.1| hypothetical protein PRUPE_ppa000278mg [Prunus persica]
Length = 1356
Score = 341 bits (875), Expect = 2e-91
Identities = 184/336 (54%), Positives = 223/336 (66%), Gaps = 2/336 (0%)
Frame = +1
Query: 28 IGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGEKTASLFLSK 207
IGG PVG LDQPVS L +SPLLNLK IL+ G S ++T SLFLSK
Sbjct: 788 IGGQPVGSLSACALSEAAYSALDQPVSLLETSPLLNLKNILECGSKKSSAKQTLSLFLSK 847
Query: 208 RLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHSSPWVCHFHIDKENV 387
+LGR HGFEYGALEVK HL L SD+VSTVMI FS ++ SPWV HFHI KE V
Sbjct: 848 KLGRRRHGFEYGALEVKNHLVGLTFSDIVSTVMIIFSSQSNSQKRFSPWVTHFHICKEIV 907
Query: 388 KTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHITCKDFSVADV-RKEDSKIYITVAVVE 564
+ RRLK+ SV+D+L R +A+ + L +L IT K S A +D ITV + E
Sbjct: 908 RKRRLKVHSVVDSLYARCNSARPELKIVLRSLLITSKGCSAAQTCNGDDDTFCITVTMPE 967
Query: 565 TSKDSSH-LDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSIGELYLQVF 741
SK+SS LD RDLVIPFLL TV+KGF KKVDILW + P SK GS GELYL+V
Sbjct: 968 NSKNSSEQLDIARDLVIPFLLGTVVKGFLEVKKVDILWNDHPRESKKIHGSSGELYLRVS 1027
Query: 742 MSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWEYFLCKLHSAVS 921
MS R + W+ L+D+CLQI DLIDW RSHPD++HD +AYGID W+YFL L +A +
Sbjct: 1028 MSGKTGRRRLWSMLMDNCLQIMDLIDWSRSHPDNVHDYCIAYGIDAGWKYFLNNLETAAN 1087
Query: 922 ETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
+ GK ILP+HL+L ADC +ATGEFV L+AKG+ Q+
Sbjct: 1088 DIGKDILPQHLILVADCLSATGEFVGLNAKGIAQQK 1123
>gb|EOY24612.1| DNA-directed RNA polymerase II subunit RPB1-B, putative [Theobroma
cacao]
Length = 1484
Score = 336 bits (862), Expect = 8e-90
Identities = 172/341 (50%), Positives = 228/341 (66%), Gaps = 3/341 (0%)
Frame = +1
Query: 16 VSHAIGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGEKTASL 195
+ IGG PVG LDQPVS L +SPLLNLK++++ G + ++T +L
Sbjct: 901 IPEGIGGQPVGSLSACAISEAAYSALDQPVSLLETSPLLNLKRVVECGSKRSNADQTMTL 960
Query: 196 FLSKRLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHSSPWVCHFHID 375
FLS +LGR HG EY ALEVK HLERL SD+V+TV I FSP+ + H +PWVCHFH+
Sbjct: 961 FLSNKLGRKRHGSEYAALEVKNHLERLTFSDIVTTVSIIFSPQMYRENHFTPWVCHFHVC 1020
Query: 376 KENVKTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHITC--KDFSVADVRKEDSKIYIT 549
K+ +K R+LK++S++D+L+M AK +LP++ IT + S D+ ED IT
Sbjct: 1021 KDTMKRRQLKVQSIIDSLHMHCTTAKTMWKISLPDMQITSNGRACSHIDMPNEDDTFCIT 1080
Query: 550 VAVVETSKDSS-HLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSIGEL 726
V +VE SK S LD +RD+VIP+LLE VIKGF KKVDILW++ SK + S GEL
Sbjct: 1081 VTIVEYSKSSHMELDVIRDMVIPYLLEAVIKGFPEIKKVDILWKDRLKVSKPHKSSCGEL 1140
Query: 727 YLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWEYFLCKL 906
YL+VF+S K W L++ CLQI D+IDW RSHPD+I+ L +AYGID W++FL L
Sbjct: 1141 YLRVFVSGDFGITKLWGVLMNDCLQIMDMIDWTRSHPDNINQLCLAYGIDAGWKFFLNNL 1200
Query: 907 HSAVSETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
SA+S+TGK IL EHL++ A+C +ATGEFV L++KGL QR
Sbjct: 1201 KSAISDTGKTILNEHLLVVANCLSATGEFVGLNSKGLRQQR 1241
>gb|EPS74753.1| hypothetical protein M569_00001, partial [Genlisea aurea]
Length = 1380
Score = 335 bits (858), Expect = 2e-89
Identities = 180/335 (53%), Positives = 230/335 (68%)
Frame = +1
Query: 25 AIGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGEKTASLFLS 204
A+GGHPVG LD P+SAL SPLL LK++L+ GV + KTASLFLS
Sbjct: 831 AMGGHPVGSLAGCAISEAAYSALDLPISALEPSPLLALKEVLECGVKRSTRCKTASLFLS 890
Query: 205 KRLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHSSPWVCHFHIDKEN 384
K L RWAHGFEYGALEVK HLERL SD+VS V IC + ST +SPW C+F+I+KE
Sbjct: 891 KGLRRWAHGFEYGALEVKNHLERLCFSDIVSDVRICPWIDDNTST-TSPWTCNFYINKEV 949
Query: 385 VKTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHITCKDFSVADVRKEDSKIYITVAVVE 564
K RLK+ S++DAL+ A K LP L I+ K S ADV++ DS I ++
Sbjct: 950 AKKMRLKMHSIVDALHRNNKLASKKLKIYLPALWISTKLCSEADVKRSDS-FCIAAKLIM 1008
Query: 565 TSKDSSHLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSIGELYLQVFM 744
+ S ++ LRD+V+P LL+TVIKGF FKKVDILW++ P+ K +R + GEL+++V M
Sbjct: 1009 KHEKFSDMEILRDMVVPVLLKTVIKGFPEFKKVDILWKDEPNHEKVARRTSGELFIRVSM 1068
Query: 745 SESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWEYFLCKLHSAVSE 924
SE CD KFW+ LVDSCL+IR+LIDWERS PDDI D + A+GI AW+ F+ LHS++ +
Sbjct: 1069 SEYCDPNKFWSNLVDSCLRIRNLIDWERSLPDDILDYSNAFGISSAWQSFVKNLHSSIID 1128
Query: 925 TGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
TGK ILPEHL++ A+C +ATGEFV L+AKGL QR
Sbjct: 1129 TGKTILPEHLIVTANCLSATGEFVALNAKGLVNQR 1163
>emb|CAN66198.1| hypothetical protein VITISV_011232 [Vitis vinifera]
Length = 1393
Score = 331 bits (848), Expect = 3e-88
Identities = 166/301 (55%), Positives = 216/301 (71%), Gaps = 1/301 (0%)
Frame = +1
Query: 130 LNLKKILDTGVGSRSGEKTASLFLSKRLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMI 309
L L+++L+ G+ + ++T SLFLSK+L + HGFEYGALEVK HLE+LL SD+VSTVMI
Sbjct: 1065 LILQRVLECGLRKSTADRTVSLFLSKKLEKRKHGFEYGALEVKNHLEKLLFSDIVSTVMI 1124
Query: 310 CFSPETRKSTHSSPWVCHFHIDKENVKTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHI 489
FSP+ TH SPWVCHFH+ +E K R LK S++DAL M+ +A+ ++ NLP+L I
Sbjct: 1125 VFSPQNGSKTHFSPWVCHFHVCEEIAKKRSLKPHSIIDALYMKCNSARAESKINLPDLQI 1184
Query: 490 TCKDFSVADVRKEDSKIY-ITVAVVETSKDSSHLDTLRDLVIPFLLETVIKGFSAFKKVD 666
T KD V D+ KEDS + ITV++V + K LDT+RDLVIPFLL V+KG KKVD
Sbjct: 1185 TSKDCFV-DMEKEDSDCFCITVSIVNSKKSCIQLDTVRDLVIPFLLGAVVKGLLDVKKVD 1243
Query: 667 ILWRELPSTSKSSRGSIGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDI 846
ILW + P S + S G LYL+V++S C + FW L+D+CLQI D+IDWERSHPD+I
Sbjct: 1244 ILWNDNPD-SDVLKSSSGRLYLRVYVSGDCGKKNFWGVLMDACLQIMDMIDWERSHPDNI 1302
Query: 847 HDLTVAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQ 1026
HD+ V YGID W+YFL L SA+S+ GK +LPEHL+L A C +ATGEFV L+AKG+ Q
Sbjct: 1303 HDIFVVYGIDAGWKYFLNSLKSAISDIGKTVLPEHLLLVASCLSATGEFVGLNAKGMARQ 1362
Query: 1027 R 1029
+
Sbjct: 1363 K 1363
>ref|XP_004511611.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X5
[Cicer arietinum]
Length = 1474
Score = 330 bits (845), Expect = 7e-88
Identities = 171/344 (49%), Positives = 225/344 (65%), Gaps = 10/344 (2%)
Frame = +1
Query: 28 IGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGEKTASLFLSK 207
IGG PVG L QP+S L +SPLLNLK +L+ G R G++T SLFLS+
Sbjct: 885 IGGEPVGTLSACAVSEAAYSALSQPISLLEASPLLNLKYVLECGSRKRGGDQTVSLFLSE 944
Query: 208 RLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHSSPWVCHFHIDKENV 387
++G+ +GFEY ALEVK +LERL+ SD+VSTVMI F+P++R SPWVCHFH+DKENV
Sbjct: 945 KIGKQRNGFEYAALEVKNYLERLMFSDIVSTVMIIFTPQSRSLEKYSPWVCHFHLDKENV 1004
Query: 388 KTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHITCKDFSVADVRKE----------DSK 537
R L++ S++D+L RY + + + LPNL I+ K SV + KE D +
Sbjct: 1005 TRRNLEVHSIIDSLYQRYDSLRKGSKVTLPNLKISTKKCSVHYMAKEGGETSVDKEIDGE 1064
Query: 538 IYITVAVVETSKDSSHLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSI 717
ITV +VE +S LD +R+++IPFLL T IKG KKVDILW++L SKS GS
Sbjct: 1065 DCITVTIVENYMNSVQLDVVRNMMIPFLLRTAIKGIFEIKKVDILWKDLSKGSKSYNGSS 1124
Query: 718 GELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWEYFL 897
GELYL+V MS DR FW AL++ C +I +IDW RSHPD+IH A+GID W++FL
Sbjct: 1125 GELYLRVTMSSDSDRGTFWGALINHCHRIMPMIDWARSHPDNIHHFCSAFGIDAGWQHFL 1184
Query: 898 CKLHSAVSETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
L SA S+TG ILP+HL L A+ +A+GEFV L++KG+ QR
Sbjct: 1185 HNLSSATSDTGTSILPKHLRLVANSLSASGEFVGLNSKGMARQR 1228
>ref|XP_002509696.1| DNA-directed RNA polymerase, putative [Ricinus communis]
gi|223549595|gb|EEF51083.1| DNA-directed RNA polymerase,
putative [Ricinus communis]
Length = 1475
Score = 329 bits (843), Expect = 1e-87
Identities = 167/336 (49%), Positives = 224/336 (66%), Gaps = 2/336 (0%)
Frame = +1
Query: 28 IGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGEKTASLFLSK 207
+ G PVG LDQP+S L SPLLNLK +L+ G+ + K+ SLFLS+
Sbjct: 885 MAGKPVGSLAACSISEAAYSALDQPISLLEKSPLLNLKNVLECGLKKSNAHKSMSLFLSE 944
Query: 208 RLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHSSPWVCHFHIDKENV 387
+LGR HGFEYGAL+V+ HLERLL SD+VS I FS ++ T SPWVCHFH+ KE +
Sbjct: 945 KLGRRRHGFEYGALKVQDHLERLLFSDIVSVSRIIFSSQSESKTCFSPWVCHFHVYKEIM 1004
Query: 388 KTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHITCKDFSVADVRKE-DSKIYITVAVVE 564
K R L + S+++ LN R K+ NLPN+ I+CK S+AD +E + + ITV +VE
Sbjct: 1005 KKRNLNVDSIINILNGR-----CKSNTNLPNVQISCKSCSIADNHREKEETLCITVTIVE 1059
Query: 565 TSKDSS-HLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSIGELYLQVF 741
SK+SS L T++DL+IPFLLETV+KG KVDILW++ P SK+ GELYL+V
Sbjct: 1060 RSKNSSTRLATIQDLMIPFLLETVLKGLMEINKVDILWKDWPRISKTHNQPYGELYLRVS 1119
Query: 742 MSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWEYFLCKLHSAVS 921
MS ++ + WN L+D CL I D+IDW S PD++ D ++AYGID W++FL +L SA+S
Sbjct: 1120 MSADSEKTRLWNLLMDYCLPIMDMIDWTCSRPDNVRDFSLAYGIDAGWKFFLQRLESAIS 1179
Query: 922 ETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
+ GK +LPEH++L A+C + TGEFV L+AKG QR
Sbjct: 1180 DVGKSVLPEHMLLVANCLSVTGEFVGLNAKGWKRQR 1215
>ref|XP_004511607.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like isoform X1
[Cicer arietinum] gi|502160026|ref|XP_004511608.1|
PREDICTED: DNA-directed RNA polymerase D subunit 1-like
isoform X2 [Cicer arietinum]
gi|502160029|ref|XP_004511609.1| PREDICTED: DNA-directed
RNA polymerase D subunit 1-like isoform X3 [Cicer
arietinum] gi|502160032|ref|XP_004511610.1| PREDICTED:
DNA-directed RNA polymerase D subunit 1-like isoform X4
[Cicer arietinum]
Length = 1475
Score = 326 bits (835), Expect = 1e-86
Identities = 170/345 (49%), Positives = 223/345 (64%), Gaps = 11/345 (3%)
Frame = +1
Query: 28 IGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGEKTASLFLSK 207
IGG PVG L QP+S L +SPLLNLK +L+ G R G++T SLFLS+
Sbjct: 885 IGGEPVGTLSACAVSEAAYSALSQPISLLEASPLLNLKYVLECGSRKRGGDQTVSLFLSE 944
Query: 208 RLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHSSPWVCHFHIDKENV 387
++G+ +GFEY ALEVK +LERL+ SD+VSTVMI F+P++R SPWVCHFH+DKENV
Sbjct: 945 KIGKQRNGFEYAALEVKNYLERLMFSDIVSTVMIIFTPQSRSLEKYSPWVCHFHLDKENV 1004
Query: 388 KTRRLKLRSVLDALNMRYIAAKMKAGNNLPNL----------HITCKDFSVADVRKE-DS 534
R L++ S++D+L RY + + + LPNL H K+ V KE D
Sbjct: 1005 TRRNLEVHSIIDSLYQRYDSLRKGSKVTLPNLKISTNRKCSVHYMAKEGGETSVDKEIDG 1064
Query: 535 KIYITVAVVETSKDSSHLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGS 714
+ ITV +VE +S LD +R+++IPFLL T IKG KKVDILW++L SKS GS
Sbjct: 1065 EDCITVTIVENYMNSVQLDVVRNMMIPFLLRTAIKGIFEIKKVDILWKDLSKGSKSYNGS 1124
Query: 715 IGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWEYF 894
GELYL+V MS DR FW AL++ C +I +IDW RSHPD+IH A+GID W++F
Sbjct: 1125 SGELYLRVTMSSDSDRGTFWGALINHCHRIMPMIDWARSHPDNIHHFCSAFGIDAGWQHF 1184
Query: 895 LCKLHSAVSETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
L L SA S+TG ILP+HL L A+ +A+GEFV L++KG+ QR
Sbjct: 1185 LHNLSSATSDTGTSILPKHLRLVANSLSASGEFVGLNSKGMARQR 1229
>ref|XP_006440521.1| hypothetical protein CICLE_v10018489mg [Citrus clementina]
gi|557542783|gb|ESR53761.1| hypothetical protein
CICLE_v10018489mg [Citrus clementina]
Length = 1443
Score = 322 bits (826), Expect = 1e-85
Identities = 167/336 (49%), Positives = 227/336 (67%), Gaps = 2/336 (0%)
Frame = +1
Query: 28 IGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGEKTASLFLSK 207
IG PVG LDQP+S L +SPLLNLK +L+ G + ++T SLFLS
Sbjct: 868 IGDQPVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSN 927
Query: 208 RLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHSSPWVCHFHIDKENV 387
+LG+ HGFEYGALEVK HLE L+LSD+VST MI +SP+T H SPW+CHFH+ KE +
Sbjct: 928 KLGKRRHGFEYGALEVKNHLECLMLSDIVSTSMIIYSPQTGSMKHFSPWICHFHVRKEIM 987
Query: 388 KTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHITCKDFSVADVRKEDSKIY-ITVAVVE 564
K LK S++D+L + AA+ + ++P++ I+ KD S +++KE + + +TV +VE
Sbjct: 988 KRTGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDAFCVTVMIVE 1047
Query: 565 TSKDSS-HLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSIGELYLQVF 741
K +S L+T++ V+PFLL+TV+KGF KKVDILW++ SKS S GELYL+V
Sbjct: 1048 NFKRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDSFGELYLRVS 1107
Query: 742 MSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWEYFLCKLHSAVS 921
MS C W+AL++ C QI D+IDW RSHPD+I +AYGID ++FL L SA+S
Sbjct: 1108 MSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFLTNLESAIS 1167
Query: 922 ETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
+TGK ILPEHL++ A+ +ATGEFV L+AKGL +QR
Sbjct: 1168 DTGKNILPEHLLIVANTLSATGEFVGLNAKGLALQR 1203
>ref|XP_006477376.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X2
[Citrus sinensis] gi|568847098|ref|XP_006477377.1|
PREDICTED: DNA-directed RNA polymerase IV subunit 1-like
isoform X3 [Citrus sinensis]
gi|568847100|ref|XP_006477378.1| PREDICTED: DNA-directed
RNA polymerase IV subunit 1-like isoform X4 [Citrus
sinensis]
Length = 1443
Score = 322 bits (825), Expect = 2e-85
Identities = 167/336 (49%), Positives = 227/336 (67%), Gaps = 2/336 (0%)
Frame = +1
Query: 28 IGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGEKTASLFLSK 207
IGG VG LDQP+S L +SPLLNLK +L+ G + ++T SLFLS
Sbjct: 868 IGGQSVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSN 927
Query: 208 RLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHSSPWVCHFHIDKENV 387
+LG+ HGFEYGALEVK HLE L+LSD+VST MI +SP+T H SPW+CHFH+ KE +
Sbjct: 928 KLGKRRHGFEYGALEVKNHLECLMLSDIVSTSMIIYSPQTGSMKHFSPWICHFHVRKEIM 987
Query: 388 KTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHITCKDFSVADVRKEDSKIY-ITVAVVE 564
K LK S++D+L + AA+ + ++P++ I+ KD S +++KE + + +TV +VE
Sbjct: 988 KRTGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDAFCVTVMIVE 1047
Query: 565 TSKDSS-HLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSIGELYLQVF 741
K +S L+T++ V+PFLL+TV+KGF KKVDILW++ SKS S GELYL+V
Sbjct: 1048 NFKRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDSFGELYLRVS 1107
Query: 742 MSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWEYFLCKLHSAVS 921
MS C W+AL++ C QI D+IDW RSHPD+I +AYGID ++FL L SA+S
Sbjct: 1108 MSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFLTNLESAIS 1167
Query: 922 ETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
+TGK ILPEHL++ A+ +ATGEFV L+AKGL +QR
Sbjct: 1168 DTGKNILPEHLLIVANTLSATGEFVGLNAKGLALQR 1203
>ref|XP_006477375.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like isoform X1
[Citrus sinensis]
Length = 1481
Score = 322 bits (825), Expect = 2e-85
Identities = 167/336 (49%), Positives = 227/336 (67%), Gaps = 2/336 (0%)
Frame = +1
Query: 28 IGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGEKTASLFLSK 207
IGG VG LDQP+S L +SPLLNLK +L+ G + ++T SLFLS
Sbjct: 906 IGGQSVGSLSACAISEAAYSALDQPISLLETSPLLNLKNVLECGSKKSNADQTMSLFLSN 965
Query: 208 RLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHSSPWVCHFHIDKENV 387
+LG+ HGFEYGALEVK HLE L+LSD+VST MI +SP+T H SPW+CHFH+ KE +
Sbjct: 966 KLGKRRHGFEYGALEVKNHLECLMLSDIVSTSMIIYSPQTGSMKHFSPWICHFHVRKEIM 1025
Query: 388 KTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHITCKDFSVADVRKEDSKIY-ITVAVVE 564
K LK S++D+L + AA+ + ++P++ I+ KD S +++KE + + +TV +VE
Sbjct: 1026 KRTGLKEHSIIDSLYRQCKAARTELKISVPDMLISNKDCSSINMQKECNDAFCVTVMIVE 1085
Query: 565 TSKDSS-HLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRGSIGELYLQVF 741
K +S L+T++ V+PFLL+TV+KGF KKVDILW++ SKS S GELYL+V
Sbjct: 1086 NFKRTSIDLETIQMWVMPFLLKTVVKGFREIKKVDILWKDKQKASKSHDDSFGELYLRVS 1145
Query: 742 MSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWEYFLCKLHSAVS 921
MS C W+AL++ C QI D+IDW RSHPD+I +AYGID ++FL L SA+S
Sbjct: 1146 MSGQCHITSLWSALMNDCHQIMDMIDWTRSHPDNIRSFCLAYGIDAGLQFFLTNLESAIS 1205
Query: 922 ETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
+TGK ILPEHL++ A+ +ATGEFV L+AKGL +QR
Sbjct: 1206 DTGKNILPEHLLIVANTLSATGEFVGLNAKGLALQR 1241
>ref|XP_003611164.1| DNA-directed RNA polymerase subunit beta [Medicago truncatula]
gi|355512499|gb|AES94122.1| DNA-directed RNA polymerase
subunit beta [Medicago truncatula]
Length = 1687
Score = 319 bits (817), Expect = 1e-84
Identities = 166/357 (46%), Positives = 228/357 (63%), Gaps = 23/357 (6%)
Frame = +1
Query: 28 IGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGEKTASLFLSK 207
IGG PVG L QP+S L +SPLLNLK +L+ G + G++T SLFLS+
Sbjct: 1045 IGGEPVGALSACAVSEAAYSALSQPISLLEASPLLNLKNVLECGSRKKGGDQTVSLFLSE 1104
Query: 208 RLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHSSPWVCHFHIDKENV 387
++G+ +GFEY ALEVK +LER + S++VSTVMI F+P+ SPWVCHFH+DKENV
Sbjct: 1105 KIGKQRNGFEYAALEVKNYLERYMFSNIVSTVMIIFTPQHCSQVKYSPWVCHFHLDKENV 1164
Query: 388 KTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHIT-----------------CKDFSVAD 516
R+L++ S++D+L +Y + + ++ LP+L I+ C+D+ +
Sbjct: 1165 TRRKLEVHSIIDSLYQQYDSFRRESKVILPSLKISSKSGREVENKEGQTCSKCQDYKANE 1224
Query: 517 V------RKEDSKIYITVAVVETSKDSSHLDTLRDLVIPFLLETVIKGFSAFKKVDILWR 678
++D + ITVAVVE SK+S LD++R +IPFLL+T IKGF KKVDILW+
Sbjct: 1225 GGETSVGNEKDGEDCITVAVVEDSKNSVQLDSVRKSLIPFLLQTAIKGFLEIKKVDILWK 1284
Query: 679 ELPSTSKSSRGSIGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLT 858
+LP +KS GS GELYL+V MS D FW L++ C +I LIDW RSHPD+IH
Sbjct: 1285 DLPKVTKSYNGSAGELYLRVTMSSGNDNGTFWGRLINHCHRIMPLIDWTRSHPDNIHHFC 1344
Query: 859 VAYGIDVAWEYFLCKLHSAVSETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
A+GID W+++ L SA S+TGK ILP+HL L A+ +A+GEFV L+AKG+ QR
Sbjct: 1345 SAFGIDAGWQHYFHNLSSATSDTGKSILPKHLRLVANSLSASGEFVGLNAKGMARQR 1401
>ref|XP_006590533.1| PREDICTED: DNA-directed RNA polymerase IV subunit 1-like [Glycine
max]
Length = 1369
Score = 317 bits (811), Expect = 6e-84
Identities = 169/347 (48%), Positives = 221/347 (63%), Gaps = 11/347 (3%)
Frame = +1
Query: 22 HAIGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGEKTASLFL 201
+AIGG PVG L QPVS L +SPLLNLK +L+ G R+G++T SLFL
Sbjct: 791 YAIGGEPVGAISACAISEAAYSALGQPVSLLETSPLLNLKNVLECGSRKRNGDQTVSLFL 850
Query: 202 SKRLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHS-SPWVCHFHIDK 378
S++LG+ HGFEY ALEVK +LERLL S++VSTVMI F+P S SPWVCHFH+DK
Sbjct: 851 SEKLGKQRHGFEYAALEVKNYLERLLFSNIVSTVMIIFTPHDGSSQEKYSPWVCHFHLDK 910
Query: 379 ENVKTRRLKLRSVLDALNMRYIAAKMKAGNNLPNLHIT----CKDFSVA------DVRKE 528
E V R+LK+ S++D+L RY + + + NL I+ C S+A + K+
Sbjct: 911 EIVTRRKLKVHSIIDSLYQRYYSQRKDSKVCFTNLKISSNRKCSADSMAKEGEDTSIDKK 970
Query: 529 DSKIYITVAVVETSKDSSHLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSR 708
+ ITV +VE SK+ LD++RDLVIPFLL T IKGF KKVD+LW S
Sbjct: 971 EGDDCITVTIVENSKNPIQLDSVRDLVIPFLLGTAIKGFLDVKKVDVLWNNQSKVKNSCN 1030
Query: 709 GSIGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWE 888
G GELYL+V +S R +FW L++ C +I +IDW RSHPD+I+ + AYGID W+
Sbjct: 1031 GFSGELYLRVTLSSEGSRGRFWGVLLNLCHKIMHIIDWTRSHPDNINHFSSAYGIDAGWQ 1090
Query: 889 YFLCKLHSAVSETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
YF L SA S+TGK ILP+HL L A+ + +GEFV L+AKG+ +QR
Sbjct: 1091 YFFNSLASATSDTGKSILPKHLCLVANSLSCSGEFVGLNAKGMALQR 1137
>gb|ESW30447.1| hypothetical protein PHAVU_002G153700g [Phaseolus vulgaris]
Length = 1463
Score = 316 bits (809), Expect = 1e-83
Identities = 167/346 (48%), Positives = 225/346 (65%), Gaps = 10/346 (2%)
Frame = +1
Query: 22 HAIGGHPVGXXXXXXXXXXXXXXLDQPVSALGSSPLLNLKKILDTGVGSRSGEKTASLFL 201
+AIGG PVG LDQPVS L +SPLLNLK +L+ G ++G+++ SLF
Sbjct: 873 YAIGGEPVGALSASAVSEAGYSALDQPVSLLEASPLLNLKNVLECGSRKKNGDQSVSLFF 932
Query: 202 SKRLGRWAHGFEYGALEVKGHLERLLLSDVVSTVMICFSPETRKSTHS-SPWVCHFHIDK 378
S+++G+ HGFEY ALEVK +LERLL S +VSTVMI F+P S SPWVCHFH+DK
Sbjct: 933 SEKVGKQRHGFEYAALEVKNYLERLLFSKIVSTVMIIFTPPDSSSLEKYSPWVCHFHLDK 992
Query: 379 ENVKTRRLKLRSVLDALNMRYIA---------AKMKAGNNLPNLHITCKDFSVADVRKED 531
E + R+LK+ S++D L RY + K+K + ++ T K+ + KED
Sbjct: 993 EILMRRKLKVHSIIDYLYQRYYSQSTEPKVGFTKLKISSKKCSVDSTAKEGEDICIDKED 1052
Query: 532 SKIYITVAVVETSKDSSHLDTLRDLVIPFLLETVIKGFSAFKKVDILWRELPSTSKSSRG 711
S ITV +VE S++ L+++RDL+IPF L T IKGF KKVDILW + S G
Sbjct: 1053 SDDCITVTIVENSENPIQLNSVRDLMIPFFLGTTIKGFMDIKKVDILWNNQSKGTNSYNG 1112
Query: 712 SIGELYLQVFMSESCDRIKFWNALVDSCLQIRDLIDWERSHPDDIHDLTVAYGIDVAWEY 891
S GELYL+V ++ S + +FW LV+ C +I +IDW RSHPD+I+ L+ AYGIDVAW+Y
Sbjct: 1113 SSGELYLRVTVASSGNTGRFWGVLVNHCHKIMQIIDWPRSHPDNINYLSSAYGIDVAWQY 1172
Query: 892 FLCKLHSAVSETGKKILPEHLVLAADCFTATGEFVPLSAKGLTMQR 1029
+ L SA+S+TGK ILP+HL L A+ +A+GEFV L+AKG+ QR
Sbjct: 1173 YYKSLASAISDTGKSILPKHLRLLANSMSASGEFVGLNAKGMAQQR 1218