BLASTX nr result
ID: Atropa21_contig00031348
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00031348
(853 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006341489.1| PREDICTED: DNA-directed RNA polymerase V sub... 342 1e-91
ref|XP_006365562.1| PREDICTED: DNA-directed RNA polymerase V sub... 340 3e-91
ref|XP_004235838.1| PREDICTED: DNA-directed RNA polymerase II su... 337 4e-90
ref|XP_006358119.1| PREDICTED: DNA-directed RNA polymerase V sub... 333 5e-89
ref|XP_006357319.1| PREDICTED: DNA-directed RNA polymerase V sub... 308 1e-81
ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypep... 276 5e-72
gb|EOY19674.1| RNA polymerase Rpb7-like, N-terminal domain [Theo... 276 9e-72
emb|CBI26363.3| unnamed protein product [Vitis vinifera] 275 2e-71
gb|EOY19671.1| RNA polymerase Rpb7-like, N-terminal domain isofo... 275 2e-71
ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II su... 274 3e-71
ref|XP_002314654.1| predicted protein [Populus trichocarpa] 274 3e-71
ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II su... 273 6e-71
gb|ABK95475.1| unknown [Populus trichocarpa] 271 2e-70
ref|XP_002312568.1| RNA polymerase Rpb7 N-terminal domain-contai... 270 4e-70
ref|NP_193202.2| DNA-directed RNA polymerase V subunit NRPE7 [Ar... 267 3e-69
ref|XP_002868270.1| RNA polymerase Rpb7 N-terminal domain-contai... 266 5e-69
gb|EOY19676.1| RNA polymerase Rpb7-like, N-terminal domain [Theo... 266 7e-69
ref|XP_006284628.1| hypothetical protein CARUB_v10005859mg [Caps... 265 1e-68
ref|XP_006605319.1| PREDICTED: uncharacterized protein LOC100527... 265 2e-68
ref|XP_006605321.1| PREDICTED: uncharacterized protein LOC100527... 264 3e-68
>ref|XP_006341489.1| PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Solanum
tuberosum]
Length = 180
Score = 342 bits (876), Expect = 1e-91
Identities = 167/180 (92%), Positives = 179/180 (99%)
Frame = -1
Query: 721 MYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERIGE 542
MYLKSQLSWNVIIPAENLDV+GLMLQKAIV+ LL+DFASKKASKNLGYFMA+TTLERIGE
Sbjct: 1 MYLKSQLSWNVIIPAENLDVEGLMLQKAIVIRLLDDFASKKASKNLGYFMALTTLERIGE 60
Query: 541 GKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYLSHQKMSD 362
GKVREHTGDVLFPVEFSC+TFK+FRGEILEGVVDKILKHGVF+RCGPTDK+YLSHQKM+D
Sbjct: 61 GKVREHTGDVLFPVEFSCITFKIFRGEILEGVVDKILKHGVFLRCGPTDKVYLSHQKMAD 120
Query: 361 YKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPISQSSV 182
YKYVPGENPIFMNEKMSRIEK+TVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPISQ++V
Sbjct: 121 YKYVPGENPIFMNEKMSRIEKDTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPISQNAV 180
>ref|XP_006365562.1| PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Solanum
tuberosum]
Length = 180
Score = 340 bits (873), Expect = 3e-91
Identities = 166/180 (92%), Positives = 179/180 (99%)
Frame = -1
Query: 721 MYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERIGE 542
MYLKSQLSWNVIIPAENLDV+GLMLQKAIV+ L++DFA+KKASKNLGYFMA+TTLERIGE
Sbjct: 1 MYLKSQLSWNVIIPAENLDVEGLMLQKAIVIRLMDDFAAKKASKNLGYFMALTTLERIGE 60
Query: 541 GKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYLSHQKMSD 362
GKVREHTGDVLFPVEFSC+TFK+FRGEILEGVVDKILKHGVF+RCGPTDK+YLSHQKM+D
Sbjct: 61 GKVREHTGDVLFPVEFSCVTFKIFRGEILEGVVDKILKHGVFLRCGPTDKVYLSHQKMAD 120
Query: 361 YKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPISQSSV 182
YKYVPGENPIFMNEKMSRIEK+TVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPISQ+SV
Sbjct: 121 YKYVPGENPIFMNEKMSRIEKDTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPISQNSV 180
>ref|XP_004235838.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Solanum lycopersicum]
Length = 180
Score = 337 bits (863), Expect = 4e-90
Identities = 164/180 (91%), Positives = 179/180 (99%)
Frame = -1
Query: 721 MYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERIGE 542
M+LKSQLSWNVIIPAENLDV+GLMLQKAIV+ LL+DFASKKASK+LGYFMAVTTLERIGE
Sbjct: 1 MFLKSQLSWNVIIPAENLDVEGLMLQKAIVIRLLDDFASKKASKSLGYFMAVTTLERIGE 60
Query: 541 GKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYLSHQKMSD 362
GKVREHTGDVLFPVEFSC+TFK+FRGEIL+GVV+KILKHGVF+RCGPTDK+YLSHQKM+D
Sbjct: 61 GKVREHTGDVLFPVEFSCITFKIFRGEILDGVVEKILKHGVFLRCGPTDKVYLSHQKMAD 120
Query: 361 YKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPISQSSV 182
YKYVPGENPIFMNEKMSRIEK+TVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPISQ++V
Sbjct: 121 YKYVPGENPIFMNEKMSRIEKDTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPISQNAV 180
>ref|XP_006358119.1| PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Solanum
tuberosum]
Length = 180
Score = 333 bits (854), Expect = 5e-89
Identities = 162/180 (90%), Positives = 177/180 (98%)
Frame = -1
Query: 721 MYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERIGE 542
MY+KSQLSWNVIIPAENLDV+GLMLQKAIV+ L++DFASKKASKNLGYFMA+T+LERIGE
Sbjct: 1 MYVKSQLSWNVIIPAENLDVEGLMLQKAIVIRLMDDFASKKASKNLGYFMALTSLERIGE 60
Query: 541 GKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYLSHQKMSD 362
GKVR+HTGDVLFPVEFSCLTFK+FRGEILEGVVDKILKHGVF+RCGPT+K+YLSHQKM+D
Sbjct: 61 GKVRDHTGDVLFPVEFSCLTFKLFRGEILEGVVDKILKHGVFLRCGPTNKVYLSHQKMAD 120
Query: 361 YKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPISQSSV 182
YKYVPGENPIFMNEKMSRIEK+TVVRFIV GARYVEAEKEFQAVVSLEGDYLGPISQ+ V
Sbjct: 121 YKYVPGENPIFMNEKMSRIEKHTVVRFIVFGARYVEAEKEFQAVVSLEGDYLGPISQTVV 180
>ref|XP_006357319.1| PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Solanum
tuberosum]
Length = 213
Score = 308 bits (790), Expect = 1e-81
Identities = 154/182 (84%), Positives = 171/182 (93%), Gaps = 1/182 (0%)
Frame = -1
Query: 724 KMYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERIG 545
++YLKSQLSWNVII A LDV+G+ML KAIV L++DFA+KKASKNLGYFM++TTLERIG
Sbjct: 32 EIYLKSQLSWNVIIHAGILDVEGVMLPKAIVSRLMDDFAAKKASKNLGYFMSLTTLERIG 91
Query: 544 EGKVREHTGDVLFPVEFSCLTFKMFRGEILEG-VVDKILKHGVFMRCGPTDKIYLSHQKM 368
EGKV+EHT DVLFPVEFSC+TFKMFRGEILEG VVD I KHGVF+RCGPTDK+YLSHQKM
Sbjct: 92 EGKVQEHTDDVLFPVEFSCVTFKMFRGEILEGRVVDNIFKHGVFLRCGPTDKVYLSHQKM 151
Query: 367 SDYKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPISQS 188
+DYKYVPGENPIFMNEKMSRIEK+TVVRFIVVGARYVEAEKEFQAV SLEGDYLGPISQ+
Sbjct: 152 ADYKYVPGENPIFMNEKMSRIEKDTVVRFIVVGARYVEAEKEFQAVGSLEGDYLGPISQN 211
Query: 187 SV 182
+V
Sbjct: 212 AV 213
>ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
[Ricinus communis] gi|223538083|gb|EEF39694.1|
DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
putative [Ricinus communis]
Length = 176
Score = 276 bits (707), Expect = 5e-72
Identities = 131/176 (74%), Positives = 158/176 (89%)
Frame = -1
Query: 721 MYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERIGE 542
MYLK QL WNVII AE+LD KGLMLQ++I++ LLEDFASKKA+K+LGY++AVTTLE IGE
Sbjct: 1 MYLKVQLPWNVIISAEHLDAKGLMLQRSIIIRLLEDFASKKATKDLGYYLAVTTLESIGE 60
Query: 541 GKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYLSHQKMSD 362
GKVREHTGDVLFPV F+ +TFK+FRGEILEGVV K+LKHGVF+RCGP + IYLS KM D
Sbjct: 61 GKVREHTGDVLFPVVFNGITFKIFRGEILEGVVHKVLKHGVFIRCGPIENIYLSCMKMPD 120
Query: 361 YKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPIS 194
Y YVPGENP+F+N+K S+IEK+ VVRFIV+G +++EAE+EFQA+VSLEGDYLGP+S
Sbjct: 121 YHYVPGENPVFLNDKTSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS 176
>gb|EOY19674.1| RNA polymerase Rpb7-like, N-terminal domain [Theobroma cacao]
Length = 176
Score = 276 bits (705), Expect = 9e-72
Identities = 135/176 (76%), Positives = 156/176 (88%)
Frame = -1
Query: 721 MYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERIGE 542
M+LK QL WNVIIPA++L KGLMLQKAIVV LL+DFA KKA+K+LGYF+AVTTLE IG+
Sbjct: 1 MFLKVQLPWNVIIPADSLGAKGLMLQKAIVVRLLDDFACKKATKDLGYFIAVTTLESIGD 60
Query: 541 GKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYLSHQKMSD 362
GKVR++TGDVLFPV FS +TFKMFRGEILEGVV KILKHGVF+RCGP IYLSH KM D
Sbjct: 61 GKVRQNTGDVLFPVVFSGITFKMFRGEILEGVVHKILKHGVFLRCGPVQNIYLSHLKMPD 120
Query: 361 YKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPIS 194
Y YVPGEN IFMNEK S+IEK+ VVRFIV+G +++EAE+EFQA+VSLEGDYLGP+S
Sbjct: 121 YHYVPGENAIFMNEKHSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS 176
>emb|CBI26363.3| unnamed protein product [Vitis vinifera]
Length = 242
Score = 275 bits (703), Expect = 2e-71
Identities = 127/178 (71%), Positives = 161/178 (90%)
Frame = -1
Query: 727 SKMYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERI 548
++M+LK QL WNVIIPAE LD KGLMLQ++I++ LL+ F++KKA++ LGYF+AVTTLE I
Sbjct: 64 TEMFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENI 123
Query: 547 GEGKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYLSHQKM 368
GEGKVR+H+GDVLFPV FSC+TFK+FRGEIL+GVV K+LKHGV +RCGP + IYLS QKM
Sbjct: 124 GEGKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKM 183
Query: 367 SDYKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPIS 194
DY+YVPGENP+F+NEK+S+IEK+ VVRFIV+G +++EAE+EFQA+VSLEGDYLGP+S
Sbjct: 184 PDYRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAEREFQALVSLEGDYLGPLS 241
>gb|EOY19671.1| RNA polymerase Rpb7-like, N-terminal domain isoform 1 [Theobroma
cacao] gi|508727775|gb|EOY19672.1| RNA polymerase
Rpb7-like, N-terminal domain isoform 2, partial
[Theobroma cacao]
Length = 176
Score = 275 bits (702), Expect = 2e-71
Identities = 134/176 (76%), Positives = 156/176 (88%)
Frame = -1
Query: 721 MYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERIGE 542
M+LK QL WNVIIPA++L KGLMLQKAIVV LL+DFA KKA+K+LGYF+AVTTLE IG+
Sbjct: 1 MFLKVQLPWNVIIPADSLGAKGLMLQKAIVVHLLDDFACKKATKDLGYFIAVTTLESIGD 60
Query: 541 GKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYLSHQKMSD 362
GKVR++TGDVLFPV FS +TFKMFRGEILEGVV KILKHGVF+RCGP IYLSH KM D
Sbjct: 61 GKVRQNTGDVLFPVVFSGITFKMFRGEILEGVVHKILKHGVFLRCGPVQNIYLSHLKMPD 120
Query: 361 YKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPIS 194
Y YVPGEN IFMN+K S+IEK+ VVRFIV+G +++EAE+EFQA+VSLEGDYLGP+S
Sbjct: 121 YHYVPGENAIFMNDKHSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS 176
>ref|XP_002284221.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Vitis
vinifera] gi|147822056|emb|CAN61549.1| hypothetical
protein VITISV_043525 [Vitis vinifera]
Length = 177
Score = 274 bits (701), Expect = 3e-71
Identities = 127/176 (72%), Positives = 159/176 (90%)
Frame = -1
Query: 721 MYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERIGE 542
M+LK QL WNVIIPAE LD KGLMLQ++I++ LL+ F++KKA++ LGYF+AVTTLE IGE
Sbjct: 1 MFLKVQLPWNVIIPAECLDAKGLMLQRSIIIRLLDAFSNKKATQELGYFLAVTTLENIGE 60
Query: 541 GKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYLSHQKMSD 362
GKVR+H+GDVLFPV FSC+TFK+FRGEIL+GVV K+LKHGV +RCGP + IYLS QKM D
Sbjct: 61 GKVRQHSGDVLFPVVFSCVTFKLFRGEILDGVVHKVLKHGVILRCGPVENIYLSCQKMPD 120
Query: 361 YKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPIS 194
Y+YVPGENP+F+NEK+S+IEK+ VVRFIV+G +++EAE+EFQA+VSLEGDYLGP+S
Sbjct: 121 YRYVPGENPVFLNEKLSKIEKDVVVRFIVMGTKWLEAEREFQALVSLEGDYLGPLS 176
>ref|XP_002314654.1| predicted protein [Populus trichocarpa]
Length = 193
Score = 274 bits (700), Expect = 3e-71
Identities = 129/191 (67%), Positives = 162/191 (84%)
Frame = -1
Query: 766 NFSDLFSGNSKLSSKMYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKN 587
N+ + + KM+LK QL WNVIIPAENLD KGLMLQ++IVV LL DFA K+A+K+
Sbjct: 3 NYPQIVVKKVEKGKKMFLKVQLPWNVIIPAENLDAKGLMLQRSIVVCLLADFAKKRATKD 62
Query: 586 LGYFMAVTTLERIGEGKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRC 407
LGY++AV+TLE IGEGKVR+HTGDVLFPV FS +TFK+F+GEILEGVV K+LKHGV +RC
Sbjct: 63 LGYYLAVSTLESIGEGKVRQHTGDVLFPVVFSGITFKIFKGEILEGVVHKVLKHGVLLRC 122
Query: 406 GPTDKIYLSHQKMSDYKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVV 227
GP + IYLS KM DY+YVPGENP+F+N+K S+IEK+ VVRF+V+G +++EAE+EFQA+V
Sbjct: 123 GPIENIYLSSMKMLDYRYVPGENPVFLNDKTSKIEKDVVVRFVVLGTKWLEAEREFQALV 182
Query: 226 SLEGDYLGPIS 194
SLEGDYLGP+S
Sbjct: 183 SLEGDYLGPVS 193
>ref|XP_004150402.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB7-like
[Cucumis sativus] gi|449522228|ref|XP_004168129.1|
PREDICTED: DNA-directed RNA polymerase II subunit
RPB7-like [Cucumis sativus]
Length = 175
Score = 273 bits (698), Expect = 6e-71
Identities = 128/176 (72%), Positives = 161/176 (91%)
Frame = -1
Query: 721 MYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERIGE 542
M+LK QL WNVIIPAENLD KGLMLQ++I++ LL++FA+KKA+K+LGYF+AVTTLE IGE
Sbjct: 1 MFLKVQLPWNVIIPAENLDAKGLMLQRSIIIRLLDEFATKKATKDLGYFLAVTTLENIGE 60
Query: 541 GKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYLSHQKMSD 362
GKVR+ TGDVLFPV FS +TFK++RGEILEGVV K+LKHGVF+RCGP + IYLS+ KM D
Sbjct: 61 GKVRQ-TGDVLFPVIFSGITFKLYRGEILEGVVHKVLKHGVFLRCGPVENIYLSYLKMPD 119
Query: 361 YKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPIS 194
Y+YVPGENP+F+N+K+S+IEK+ VVRFIV+G +++EAE+EFQA+VSLEGDYLGP+S
Sbjct: 120 YRYVPGENPVFLNDKLSKIEKDVVVRFIVIGTKWLEAEREFQALVSLEGDYLGPVS 175
>gb|ABK95475.1| unknown [Populus trichocarpa]
Length = 176
Score = 271 bits (693), Expect = 2e-70
Identities = 127/176 (72%), Positives = 157/176 (89%)
Frame = -1
Query: 721 MYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERIGE 542
M+LK QL WNVIIPAENLD KGLMLQ++IVV LL DFA K+A+K+LGY++AV+TLE IGE
Sbjct: 1 MFLKVQLPWNVIIPAENLDAKGLMLQRSIVVCLLADFAKKRATKDLGYYLAVSTLESIGE 60
Query: 541 GKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYLSHQKMSD 362
GKVR+HTGDVLFPV FS +TFK+F+GEILEGVV K+LKHGV +RCGP + IYLS KM D
Sbjct: 61 GKVRQHTGDVLFPVVFSGITFKIFKGEILEGVVHKVLKHGVLLRCGPIENIYLSSMKMLD 120
Query: 361 YKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPIS 194
Y+YVPGENP+F+N+K S+IEK+ VVRF+V+G +++EAE+EFQA+VSLEGDYLGP+S
Sbjct: 121 YRYVPGENPVFLNDKTSKIEKDVVVRFVVLGTKWLEAEREFQALVSLEGDYLGPVS 176
>ref|XP_002312568.1| RNA polymerase Rpb7 N-terminal domain-containing family protein
[Populus trichocarpa] gi|222852388|gb|EEE89935.1| RNA
polymerase Rpb7 N-terminal domain-containing family
protein [Populus trichocarpa]
Length = 176
Score = 270 bits (691), Expect = 4e-70
Identities = 126/176 (71%), Positives = 157/176 (89%)
Frame = -1
Query: 721 MYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERIGE 542
M+LK QL WNVIIPAENLD KGLMLQ++IVV LL+DFA K A+K+LGY++AV+TLE IGE
Sbjct: 1 MFLKVQLPWNVIIPAENLDAKGLMLQRSIVVRLLDDFAKKGATKDLGYYLAVSTLESIGE 60
Query: 541 GKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYLSHQKMSD 362
GKVR+HTGDVLFPV FS +TFK+FRGEIL+G+V K+LKHGV +RCGP + IYLS KM D
Sbjct: 61 GKVRQHTGDVLFPVVFSGITFKIFRGEILDGIVHKVLKHGVLLRCGPIENIYLSCMKMPD 120
Query: 361 YKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPIS 194
Y+YVPGENP+F+N+K S+IEK+ VVRF+V+G +++EAE+EFQA+VSLEGDYLGP+S
Sbjct: 121 YRYVPGENPVFLNDKTSKIEKDVVVRFVVLGTKWLEAEREFQALVSLEGDYLGPVS 176
>ref|NP_193202.2| DNA-directed RNA polymerase V subunit NRPE7 [Arabidopsis thaliana]
gi|544604203|sp|A6QRA1.1|NRPE7_ARATH RecName:
Full=DNA-directed RNA polymerase V subunit 7
gi|149944323|gb|ABR46204.1| At4g14660 [Arabidopsis
thaliana] gi|332658072|gb|AEE83472.1| DNA-directed RNA
polymerase V subunit NRPE7 [Arabidopsis thaliana]
Length = 178
Score = 267 bits (683), Expect = 3e-69
Identities = 123/177 (69%), Positives = 155/177 (87%)
Frame = -1
Query: 721 MYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERIGE 542
M+LK QL WNV+IPAEN+D KGLML++AI+V LLE FASKKA+K LGY++AVTTL++IGE
Sbjct: 1 MFLKVQLPWNVMIPAENMDAKGLMLKRAILVELLEAFASKKATKELGYYVAVTTLDKIGE 60
Query: 541 GKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYLSHQKMSD 362
GK+REHTG+VLFPV FS +TFK+F+GEI+ GVV K+LKHGVFMRCGP + +YLS+ KM D
Sbjct: 61 GKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCGPIENVYLSYTKMPD 120
Query: 361 YKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPISQ 191
YKY+PGENPIFMNEK SRI+ T VR +V+G +++E E+EFQA+ SLEGDYLGP+S+
Sbjct: 121 YKYIPGENPIFMNEKTSRIQVETTVRVVVIGIKWMEVEREFQALASLEGDYLGPLSE 177
>ref|XP_002868270.1| RNA polymerase Rpb7 N-terminal domain-containing protein
[Arabidopsis lyrata subsp. lyrata]
gi|297314106|gb|EFH44529.1| RNA polymerase Rpb7
N-terminal domain-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 178
Score = 266 bits (681), Expect = 5e-69
Identities = 123/177 (69%), Positives = 156/177 (88%)
Frame = -1
Query: 721 MYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERIGE 542
M+LK QL WNV+IPAEN+D KGL+L++AI+V LL+ FASKKA+K LGY++AVTTL++IGE
Sbjct: 1 MFLKVQLPWNVMIPAENMDAKGLILKRAILVELLDAFASKKATKELGYYVAVTTLDKIGE 60
Query: 541 GKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYLSHQKMSD 362
GK+REHTG+VLFPV FS +TFK+F+GEI+ GVV K+LKHGVFMRCGP + +YLS+ KM D
Sbjct: 61 GKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCGPIENVYLSYTKMPD 120
Query: 361 YKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPISQ 191
YKYVPGENPIFMNEK SRI+ T VR +V+G +++EAE+EFQA+ SLEGDYLGP+S+
Sbjct: 121 YKYVPGENPIFMNEKTSRIQVETTVRVVVIGIKWMEAEREFQALASLEGDYLGPLSE 177
>gb|EOY19676.1| RNA polymerase Rpb7-like, N-terminal domain [Theobroma cacao]
Length = 176
Score = 266 bits (680), Expect = 7e-69
Identities = 130/176 (73%), Positives = 153/176 (86%)
Frame = -1
Query: 721 MYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERIGE 542
M+LK QL WNVIIPA++L +GLMLQKAIVV L +DFA KKA+K+LGYF+AVTTLE IG+
Sbjct: 1 MFLKVQLPWNVIIPADSLGAEGLMLQKAIVVRLWDDFACKKATKDLGYFIAVTTLESIGD 60
Query: 541 GKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYLSHQKMSD 362
GKVR++TGDV FPV FS +TFKMFRGEILEGVV KILKHGVF+RCGP IYLSH KM D
Sbjct: 61 GKVRQNTGDVPFPVVFSGITFKMFRGEILEGVVHKILKHGVFLRCGPVQNIYLSHLKMPD 120
Query: 361 YKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPIS 194
Y YVPGEN IFMN+K S+IEK+ VVRFIV+G +++EAE+EFQA+ SLEGDYLGP+S
Sbjct: 121 YHYVPGENAIFMNDKHSKIEKDVVVRFIVIGTKWLEAEREFQALFSLEGDYLGPVS 176
>ref|XP_006284628.1| hypothetical protein CARUB_v10005859mg [Capsella rubella]
gi|482553333|gb|EOA17526.1| hypothetical protein
CARUB_v10005859mg [Capsella rubella]
Length = 178
Score = 265 bits (678), Expect = 1e-68
Identities = 122/177 (68%), Positives = 155/177 (87%)
Frame = -1
Query: 721 MYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERIGE 542
M+LK +L WNV+IPAEN+D KGLML++AI+V LL FASKKA+K LGY++AVTTL++IGE
Sbjct: 1 MFLKVKLPWNVMIPAENMDAKGLMLKRAILVELLNAFASKKATKELGYYVAVTTLDKIGE 60
Query: 541 GKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYLSHQKMSD 362
GK+REHTG+VLFPV FS +TFK+F+GEI+ GVV K+LKHGVFMRCGP + +YLS+ KM D
Sbjct: 61 GKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCGPIENVYLSYMKMPD 120
Query: 361 YKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPISQ 191
YKY+PGENPIFMN+KMSRI+ VR +V+G +++EAE+EFQA+ SLEGDYLGPIS+
Sbjct: 121 YKYIPGENPIFMNDKMSRIQVEATVRVVVLGTKWMEAEREFQALASLEGDYLGPISE 177
>ref|XP_006605319.1| PREDICTED: uncharacterized protein LOC100527862 isoform X1 [Glycine
max] gi|571562465|ref|XP_006605320.1| PREDICTED:
uncharacterized protein LOC100527862 isoform X2 [Glycine
max]
Length = 198
Score = 265 bits (676), Expect = 2e-68
Identities = 126/187 (67%), Positives = 156/187 (83%)
Frame = -1
Query: 742 NSKLSSKMYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVT 563
+++ M+LK QL WNVII AENL +GLML +AI+V LL DFA KKA+K+LGYF+AVT
Sbjct: 12 STRKKQTMFLKVQLHWNVIIAAENLQPEGLMLHRAIIVRLLSDFAVKKATKDLGYFLAVT 71
Query: 562 TLERIGEGKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYL 383
TLE+IGEGKVR+HTGDVLFPV F+ +TFK F+GEILEGVV K+LKHGVFMRCGP + +YL
Sbjct: 72 TLEKIGEGKVRQHTGDVLFPVVFNVITFKFFKGEILEGVVHKVLKHGVFMRCGPIENVYL 131
Query: 382 SHQKMSDYKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLG 203
S+ KM DY+YVPGEN FMN+KMS+I K+ VRF V+G +++EAE+EFQA+VSLEGDYLG
Sbjct: 132 SNLKMPDYRYVPGENACFMNDKMSKIGKDVTVRFSVIGTKWMEAEREFQALVSLEGDYLG 191
Query: 202 PISQSSV 182
PIS +
Sbjct: 192 PISTPDI 198
>ref|XP_006605321.1| PREDICTED: uncharacterized protein LOC100527862 isoform X3 [Glycine
max]
Length = 197
Score = 264 bits (675), Expect = 3e-68
Identities = 126/180 (70%), Positives = 153/180 (85%)
Frame = -1
Query: 721 MYLKSQLSWNVIIPAENLDVKGLMLQKAIVVGLLEDFASKKASKNLGYFMAVTTLERIGE 542
M+LK QL WNVII AENL +GLML +AI+V LL DFA KKA+K+LGYF+AVTTLE+IGE
Sbjct: 18 MFLKVQLHWNVIIAAENLQPEGLMLHRAIIVRLLSDFAVKKATKDLGYFLAVTTLEKIGE 77
Query: 541 GKVREHTGDVLFPVEFSCLTFKMFRGEILEGVVDKILKHGVFMRCGPTDKIYLSHQKMSD 362
GKVR+HTGDVLFPV F+ +TFK F+GEILEGVV K+LKHGVFMRCGP + +YLS+ KM D
Sbjct: 78 GKVRQHTGDVLFPVVFNVITFKFFKGEILEGVVHKVLKHGVFMRCGPIENVYLSNLKMPD 137
Query: 361 YKYVPGENPIFMNEKMSRIEKNTVVRFIVVGARYVEAEKEFQAVVSLEGDYLGPISQSSV 182
Y+YVPGEN FMN+KMS+I K+ VRF V+G +++EAE+EFQA+VSLEGDYLGPIS +
Sbjct: 138 YRYVPGENACFMNDKMSKIGKDVTVRFSVIGTKWMEAEREFQALVSLEGDYLGPISTPDI 197