BLASTX nr result
ID: Atropa21_contig00031116
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00031116
(545 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006354957.1| PREDICTED: polyadenylate-binding protein RBP... 109 5e-22
ref|XP_004238180.1| PREDICTED: polyadenylate-binding protein RBP... 104 2e-20
emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum] 97 3e-18
gb|EOY14556.1| RNA-binding protein 47C isoform 3 [Theobroma cacao] 95 1e-17
gb|EOY14554.1| RNA-binding protein 47C isoform 1 [Theobroma cacao] 95 1e-17
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote... 94 2e-17
emb|CBI19566.3| unnamed protein product [Vitis vinifera] 94 2e-17
ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote... 94 2e-17
gb|EXB75612.1| Polyadenylate-binding protein RBP47C [Morus notab... 94 3e-17
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici... 92 1e-16
gb|EMJ23485.1| hypothetical protein PRUPE_ppa005903mg [Prunus pe... 88 1e-15
ref|XP_004501589.1| PREDICTED: polyadenylate-binding protein RBP... 88 2e-15
gb|ESW08657.1| hypothetical protein PHAVU_009G063200g [Phaseolus... 87 2e-15
ref|XP_004291135.1| PREDICTED: polyadenylate-binding protein RBP... 87 2e-15
emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera] 87 2e-15
gb|ESW32817.1| hypothetical protein PHAVU_001G019600g [Phaseolus... 87 3e-15
gb|AGV54251.1| RNA binding post-transcriptional regulator csx1 l... 87 3e-15
ref|XP_003528246.1| PREDICTED: polyadenylate-binding protein RBP... 87 3e-15
ref|XP_006473363.1| PREDICTED: polyadenylate-binding protein RBP... 86 6e-15
ref|XP_006434827.1| hypothetical protein CICLE_v10001214mg [Citr... 86 6e-15
>ref|XP_006354957.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Solanum
tuberosum]
Length = 438
Score = 109 bits (272), Expect = 5e-22
Identities = 52/66 (78%), Positives = 53/66 (80%)
Frame = -1
Query: 545 VRLSWGRSPANKQSRSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMYAATYGAYPVYG 366
VRLSWGR+PANKQSRSDFGNQWTG P YAFPPPHDPGMYAA YGAYPVYG
Sbjct: 373 VRLSWGRNPANKQSRSDFGNQWTG-PYYGGHFYDGYGYAFPPPHDPGMYAAAYGAYPVYG 431
Query: 365 THQQQV 348
THQQQV
Sbjct: 432 THQQQV 437
>ref|XP_004238180.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Solanum
lycopersicum]
Length = 451
Score = 104 bits (259), Expect = 2e-20
Identities = 50/66 (75%), Positives = 51/66 (77%)
Frame = -1
Query: 545 VRLSWGRSPANKQSRSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMYAATYGAYPVYG 366
VRLSWGR+PANKQ RSDFGNQWTG P YAFP PHDPGMYAA YGAYPVYG
Sbjct: 386 VRLSWGRNPANKQPRSDFGNQWTG-PYYGGHFYDGYGYAFPQPHDPGMYAAAYGAYPVYG 444
Query: 365 THQQQV 348
THQQQV
Sbjct: 445 THQQQV 450
>emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
Length = 456
Score = 96.7 bits (239), Expect = 3e-18
Identities = 48/69 (69%), Positives = 50/69 (72%), Gaps = 3/69 (4%)
Frame = -1
Query: 545 VRLSWGRSPANKQSRSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMY---AATYGAYP 375
VRL WGR+PANKQSR DFGNQWTG P YAFPP HDPGMY AA YGAYP
Sbjct: 388 VRLFWGRNPANKQSRGDFGNQWTG-PYYGGHFYDGYGYAFPPQHDPGMYAAAAAAYGAYP 446
Query: 374 VYGTHQQQV 348
+YGTHQQQV
Sbjct: 447 IYGTHQQQV 455
>gb|EOY14556.1| RNA-binding protein 47C isoform 3 [Theobroma cacao]
Length = 436
Score = 94.7 bits (234), Expect = 1e-17
Identities = 46/69 (66%), Positives = 52/69 (75%), Gaps = 3/69 (4%)
Frame = -1
Query: 545 VRLSWGRSPANKQSRSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMY---AATYGAYP 375
VRLSWGR+PANKQ R+D+GNQW+G YAFPPPHDPGMY AATYGAYP
Sbjct: 368 VRLSWGRNPANKQFRADYGNQWSG-AYYGGQVYDGYGYAFPPPHDPGMYAAAAATYGAYP 426
Query: 374 VYGTHQQQV 348
+YG+HQQQV
Sbjct: 427 IYGSHQQQV 435
>gb|EOY14554.1| RNA-binding protein 47C isoform 1 [Theobroma cacao]
Length = 435
Score = 94.7 bits (234), Expect = 1e-17
Identities = 46/69 (66%), Positives = 52/69 (75%), Gaps = 3/69 (4%)
Frame = -1
Query: 545 VRLSWGRSPANKQSRSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMY---AATYGAYP 375
VRLSWGR+PANKQ R+D+GNQW+G YAFPPPHDPGMY AATYGAYP
Sbjct: 367 VRLSWGRNPANKQFRADYGNQWSG-AYYGGQVYDGYGYAFPPPHDPGMYAAAAATYGAYP 425
Query: 374 VYGTHQQQV 348
+YG+HQQQV
Sbjct: 426 IYGSHQQQV 434
>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 409
Score = 94.4 bits (233), Expect = 2e-17
Identities = 45/66 (68%), Positives = 48/66 (72%)
Frame = -1
Query: 545 VRLSWGRSPANKQSRSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMYAATYGAYPVYG 366
VRLSWGR+PANKQ R+DFGNQW+G YA PPPHDP MYAA YGAYPVYG
Sbjct: 344 VRLSWGRNPANKQMRADFGNQWSG-AYYGGQVYDGYGYALPPPHDPTMYAAAYGAYPVYG 402
Query: 365 THQQQV 348
HQQQV
Sbjct: 403 NHQQQV 408
>emb|CBI19566.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 94.4 bits (233), Expect = 2e-17
Identities = 45/66 (68%), Positives = 48/66 (72%)
Frame = -1
Query: 545 VRLSWGRSPANKQSRSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMYAATYGAYPVYG 366
VRLSWGR+PANKQ R+DFGNQW+G YA PPPHDP MYAA YGAYPVYG
Sbjct: 259 VRLSWGRNPANKQMRADFGNQWSG-AYYGGQVYDGYGYALPPPHDPTMYAAAYGAYPVYG 317
Query: 365 THQQQV 348
HQQQV
Sbjct: 318 NHQQQV 323
>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 418
Score = 94.4 bits (233), Expect = 2e-17
Identities = 45/66 (68%), Positives = 48/66 (72%)
Frame = -1
Query: 545 VRLSWGRSPANKQSRSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMYAATYGAYPVYG 366
VRLSWGR+PANKQ R+DFGNQW+G YA PPPHDP MYAA YGAYPVYG
Sbjct: 353 VRLSWGRNPANKQMRADFGNQWSG-AYYGGQVYDGYGYALPPPHDPTMYAAAYGAYPVYG 411
Query: 365 THQQQV 348
HQQQV
Sbjct: 412 NHQQQV 417
>gb|EXB75612.1| Polyadenylate-binding protein RBP47C [Morus notabilis]
Length = 423
Score = 93.6 bits (231), Expect = 3e-17
Identities = 44/66 (66%), Positives = 48/66 (72%)
Frame = -1
Query: 545 VRLSWGRSPANKQSRSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMYAATYGAYPVYG 366
VRLSWGR+PANKQ R DFGNQW G YA PPPHDP MYAA+YGAYP+YG
Sbjct: 358 VRLSWGRNPANKQYRGDFGNQW-GGAYYGGQVYDGYGYALPPPHDPSMYAASYGAYPLYG 416
Query: 365 THQQQV 348
+HQQQV
Sbjct: 417 SHQQQV 422
>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223550967|gb|EEF52453.1| nuclear acid binding
protein, putative [Ricinus communis]
Length = 443
Score = 91.7 bits (226), Expect = 1e-16
Identities = 46/67 (68%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Frame = -1
Query: 545 VRLSWGRSPANKQS-RSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMYAATYGAYPVY 369
VRLSWGR+PANKQ RSDFGNQW G YA PPPHDP MYAA YGAYPVY
Sbjct: 377 VRLSWGRNPANKQQLRSDFGNQW-GGAYYGGQIYDGYGYALPPPHDPSMYAAPYGAYPVY 435
Query: 368 GTHQQQV 348
G+HQQQV
Sbjct: 436 GSHQQQV 442
>gb|EMJ23485.1| hypothetical protein PRUPE_ppa005903mg [Prunus persica]
Length = 438
Score = 88.2 bits (217), Expect = 1e-15
Identities = 45/67 (67%), Positives = 47/67 (70%), Gaps = 1/67 (1%)
Frame = -1
Query: 545 VRLSWGRSPANKQSRSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMY-AATYGAYPVY 369
VRLSWGR+PANKQ R+DFGNQW G YA PP HDP MY AA YGAYPVY
Sbjct: 372 VRLSWGRNPANKQFRTDFGNQWAG-AYYGGPVYDGYGYALPPHHDPSMYAAAAYGAYPVY 430
Query: 368 GTHQQQV 348
GTHQQQV
Sbjct: 431 GTHQQQV 437
>ref|XP_004501589.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cicer
arietinum]
Length = 413
Score = 87.8 bits (216), Expect = 2e-15
Identities = 40/66 (60%), Positives = 43/66 (65%)
Frame = -1
Query: 545 VRLSWGRSPANKQSRSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMYAATYGAYPVYG 366
VRLSWGR+PANKQ R DFG+ W G A P PHDP MYAA YGAYP+YG
Sbjct: 347 VRLSWGRNPANKQFRMDFGSPWNGAYYGGPVYDGYGYAALPHPHDPSMYAAAYGAYPIYG 406
Query: 365 THQQQV 348
HQQQV
Sbjct: 407 GHQQQV 412
>gb|ESW08657.1| hypothetical protein PHAVU_009G063200g [Phaseolus vulgaris]
Length = 420
Score = 87.4 bits (215), Expect = 2e-15
Identities = 41/66 (62%), Positives = 46/66 (69%)
Frame = -1
Query: 545 VRLSWGRSPANKQSRSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMYAATYGAYPVYG 366
VRLSWGR+PANKQ R DFG+ W+G YA PPPHDP +YAA YGAYP+YG
Sbjct: 355 VRLSWGRNPANKQFRGDFGSPWSG-AYYGGPVYDGYGYALPPPHDPSIYAAAYGAYPIYG 413
Query: 365 THQQQV 348
HQQQV
Sbjct: 414 GHQQQV 419
>ref|XP_004291135.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Fragaria
vesca subsp. vesca]
Length = 444
Score = 87.4 bits (215), Expect = 2e-15
Identities = 45/69 (65%), Positives = 46/69 (66%), Gaps = 3/69 (4%)
Frame = -1
Query: 545 VRLSWGRSPANKQS-RSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMY--AATYGAYP 375
VRLSWGR+PANKQ R DFGNQW G YA PP HDP MY AA YGAYP
Sbjct: 375 VRLSWGRNPANKQQFRMDFGNQWAGAAYYGGPVYDGYGYALPPQHDPSMYAAAAAYGAYP 434
Query: 374 VYGTHQQQV 348
VYGTHQQQV
Sbjct: 435 VYGTHQQQV 443
>emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera]
Length = 536
Score = 87.4 bits (215), Expect = 2e-15
Identities = 44/70 (62%), Positives = 48/70 (68%), Gaps = 5/70 (7%)
Frame = -1
Query: 545 VRLSWGRSPANKQS-----RSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMYAATYGA 381
VRLSWGR+PANKQ+ R+DFGNQW+G YA PPPHDP MYAA YGA
Sbjct: 241 VRLSWGRNPANKQANSLFMRADFGNQWSG-AYYGGQVYDGYGYALPPPHDPTMYAAAYGA 299
Query: 380 YPVYGTHQQQ 351
YPVYG HQQQ
Sbjct: 300 YPVYGNHQQQ 309
>gb|ESW32817.1| hypothetical protein PHAVU_001G019600g [Phaseolus vulgaris]
Length = 415
Score = 87.0 bits (214), Expect = 3e-15
Identities = 42/66 (63%), Positives = 45/66 (68%)
Frame = -1
Query: 545 VRLSWGRSPANKQSRSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMYAATYGAYPVYG 366
VRLSWGR+PANKQ R DFGN WTG YA PP HDP +YAA YGAYP+YG
Sbjct: 350 VRLSWGRNPANKQFRMDFGNPWTG-AYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYG 408
Query: 365 THQQQV 348
HQQQV
Sbjct: 409 AHQQQV 414
>gb|AGV54251.1| RNA binding post-transcriptional regulator csx1 like protein
[Phaseolus vulgaris]
Length = 416
Score = 87.0 bits (214), Expect = 3e-15
Identities = 42/66 (63%), Positives = 45/66 (68%)
Frame = -1
Query: 545 VRLSWGRSPANKQSRSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMYAATYGAYPVYG 366
VRLSWGR+PANKQ R DFGN WTG YA PP HDP +YAA YGAYP+YG
Sbjct: 351 VRLSWGRNPANKQFRMDFGNPWTG-AYYGAPIYDGYGYALPPRHDPSIYAAAYGAYPLYG 409
Query: 365 THQQQV 348
HQQQV
Sbjct: 410 AHQQQV 415
>ref|XP_003528246.1| PREDICTED: polyadenylate-binding protein RBP47C'-like [Glycine max]
Length = 410
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/66 (62%), Positives = 46/66 (69%)
Frame = -1
Query: 545 VRLSWGRSPANKQSRSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMYAATYGAYPVYG 366
VRLSWGR+PANKQ R+DFGN W+G YA PP HDP +YAA YGAYP+YG
Sbjct: 345 VRLSWGRNPANKQFRADFGNAWSG-AYYGGPVYDGYGYALPPSHDPSIYAAAYGAYPIYG 403
Query: 365 THQQQV 348
HQQQV
Sbjct: 404 GHQQQV 409
>ref|XP_006473363.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Citrus
sinensis]
Length = 433
Score = 85.9 bits (211), Expect = 6e-15
Identities = 43/69 (62%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Frame = -1
Query: 545 VRLSWGRSPANKQSRSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMY---AATYGAYP 375
VRLSWGR+PANKQ R+D+GNQW+G YA PPP+DP MY AA YGAYP
Sbjct: 365 VRLSWGRNPANKQFRADYGNQWSG-AYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 423
Query: 374 VYGTHQQQV 348
VYG+HQQQV
Sbjct: 424 VYGSHQQQV 432
>ref|XP_006434827.1| hypothetical protein CICLE_v10001214mg [Citrus clementina]
gi|557536949|gb|ESR48067.1| hypothetical protein
CICLE_v10001214mg [Citrus clementina]
Length = 432
Score = 85.9 bits (211), Expect = 6e-15
Identities = 43/69 (62%), Positives = 49/69 (71%), Gaps = 3/69 (4%)
Frame = -1
Query: 545 VRLSWGRSPANKQSRSDFGNQWTGNPXXXXXXXXXXXYAFPPPHDPGMY---AATYGAYP 375
VRLSWGR+PANKQ R+D+GNQW+G YA PPP+DP MY AA YGAYP
Sbjct: 364 VRLSWGRNPANKQFRADYGNQWSG-AYYGGQVYDGYGYAIPPPNDPSMYAAAAAAYGAYP 422
Query: 374 VYGTHQQQV 348
VYG+HQQQV
Sbjct: 423 VYGSHQQQV 431