BLASTX nr result
ID: Atropa21_contig00030443
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00030443
(498 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 97 9e-19
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605... 88 4e-17
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 92 5e-17
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579... 74 3e-11
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A... 69 7e-10
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601... 68 1e-09
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A... 67 2e-09
ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein A... 62 1e-07
ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein A... 61 1e-07
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A... 60 2e-07
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A... 58 1e-06
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A... 58 2e-06
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 57 2e-06
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A... 57 2e-06
ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein A... 57 3e-06
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A... 57 3e-06
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 97.1 bits (240), Expect(2) = 9e-19
Identities = 45/127 (35%), Positives = 73/127 (57%)
Frame = +1
Query: 61 FSSFEGMNMEGLPLQ*RIVKWWIAPVTRRLK*IFQEVSTIIIWKFWKRRNAIKHGEKRSI 240
F+S+ G+ + GL LQ I KWW + +L I + V +I+W+ WKRRN+ +HG++ +
Sbjct: 562 FASYAGIIINGLNLQQLIFKWWDYKASNKLSQILKAVLAVIMWELWKRRNSYRHGKETTY 621
Query: 241 ERVIYQVYITIQRLVTTRNLSIKQVPHRWDHMIQMLKGGTTHLRITKDIWQFPPTGWLMC 420
+ YQ + + +LVT + IK + + W ++ ML+ L W+ P GW+ C
Sbjct: 622 NNMYYQCQLILYQLVTIKFPWIKGLTYHWPQVVGMLQNYKPPLHYKVVRWRKPSEGWVTC 681
Query: 421 NTDGASR 441
NTDGAS+
Sbjct: 682 NTDGASK 688
Score = 21.9 bits (45), Expect(2) = 9e-19
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 438 KRNSDRSFYGFCLRNSDDNL 497
K N S YG+C+R+ + +L
Sbjct: 688 KGNPRMSSYGYCIRDKNGDL 707
>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
Length = 333
Score = 88.2 bits (217), Expect(2) = 4e-17
Identities = 44/127 (34%), Positives = 69/127 (54%)
Frame = +1
Query: 61 FSSFEGMNMEGLPLQ*RIVKWWIAPVTRRLK*IFQEVSTIIIWKFWKRRNAIKHGEKRSI 240
F++ G+++EGL L ++KWW + LK + + V T++IW WKRRN +KHG S
Sbjct: 51 FANVAGISLEGLQLSQVVIKWWTSDSCPILKPLMRVVPTVVIWNLWKRRNNLKHGRPSSY 110
Query: 241 ERVIYQVYITIQRLVTTRNLSIKQVPHRWDHMIQMLKGGTTHLRITKDIWQFPPTGWLMC 420
++Y+V + +L T ++ P +W ++ L+ L W+ PP G L C
Sbjct: 111 NNLVYRVNSDLWKLGRTIYPKLQDFPTKWSDIVACLEKHKPKLYYLPVCWK-PPEGILTC 169
Query: 421 NTDGASR 441
NTD ASR
Sbjct: 170 NTDVASR 176
Score = 25.4 bits (54), Expect(2) = 4e-17
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3
Query: 444 NSDRSFYGFCLRNSDDNL 497
N + S YGFCLRNS +L
Sbjct: 178 NPEISSYGFCLRNSVGDL 195
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 92.4 bits (228), Expect = 5e-17
Identities = 44/128 (34%), Positives = 73/128 (57%)
Frame = +1
Query: 58 YFSSFEGMNMEGLPLQ*RIVKWWIAPVTRRLK*IFQEVSTIIIWKFWKRRNAIKHGEKRS 237
YF+ F G+N++G+ LQ I+ WW T +L+ I++ + II+W WKRRNA+KH S
Sbjct: 590 YFAHFAGINIDGMHLQQLIISWWKHEATPKLQGIYKAIPAIIMWTLWKRRNALKHDSSIS 649
Query: 238 IERVIYQVYITIQRLVTTRNLSIKQVPHRWDHMIQMLKGGTTHLRITKDIWQFPPTGWLM 417
ER++ V ++++V ++ IK + W +IQ L + + + W+ P ++
Sbjct: 650 WERMVEMVIEVVRKMVKSQFPWIKNMRWTWQAIIQRLNQYKRKIHVLRVTWKPPDDHYVK 709
Query: 418 CNTDGASR 441
NTDGA R
Sbjct: 710 SNTDGACR 717
>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
Length = 778
Score = 73.6 bits (179), Expect = 3e-11
Identities = 41/137 (29%), Positives = 66/137 (48%)
Frame = +1
Query: 31 YLFQLTGRAYFSSFEGMNMEGLPLQ*RIVKWWIAPVTRRLK*IFQEVSTIIIWKFWKRRN 210
+L+ + GRA G+ L L+ I KWW A + +L+ +F + I+W+ WK RN
Sbjct: 17 FLWNMVGRA-----AGIEGPFLQLKDTIFKWWNANCSAKLRPLFNAIPGFILWESWKGRN 71
Query: 211 AIKHGEKRSIERVIYQVYITIQRLVTTRNLSIKQVPHRWDHMIQMLKGGTTHLRITKDIW 390
+KHG K S ++ ++ I L R ++ +P W M++ + + L W
Sbjct: 72 TVKHGGKISRYNMLAEITRNIHNLAMVRYPWLRNIPKDWSMMVKFFENYISVLATKVIYW 131
Query: 391 QFPPTGWLMCNTDGASR 441
P G CNTD AS+
Sbjct: 132 VPPNMGVYKCNTDCASK 148
>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 316
Score = 68.9 bits (167), Expect = 7e-10
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
Frame = +1
Query: 40 QLTGR--AYFSSFEGMNMEGLPLQ*RIVKWWIAPVTRR-LK*IFQEVSTIIIWKFWKRRN 210
Q GR ++FS+ G+ E LQ R+ +WW A T + + Q T + W WK R
Sbjct: 20 QFAGRVWSFFSASAGLKEEQPSLQARLRQWWSATATNAGHQLLLQATPTFVCWNLWKNRC 79
Query: 211 AIKHGEKRS-IERVIYQVYITIQRLVTTRNLSIKQVPHRWDHMIQMLKGGTTHLRITKDI 387
A K+G K + I RV Y +Y +++ IK P W + Q + +++ K
Sbjct: 80 ACKYGGKATNISRVKYAIYKDTFKMLQNTFPHIKW-PSNWTALYQTSEKCKHDIKVCKVA 138
Query: 388 WQFPPTGWLMCNTDGAS 438
W PP W+ NTDG++
Sbjct: 139 WNRPPEEWIKINTDGSA 155
>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
Length = 2019
Score = 68.2 bits (165), Expect = 1e-09
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Frame = +1
Query: 58 YFSSFEGMNMEGLPLQ*RIVKWWIAPVTRRL-K*IFQEVSTIIIWKFWKRRNAIKHGEKR 234
YF+ G+ + LPL+ I++WW AP K I I W WK R A+K+G K+
Sbjct: 959 YFAISLGIRTDFLPLRNMIMRWWSAPHNNEAHKLILHSTPIFICWNLWKNRCAVKYGGKQ 1018
Query: 235 S-IERVIYQVYITIQRLVTTRNLSIKQVPHRWDHMIQMLKGGTTHLRITKDIWQFPPTGW 411
S I RV + V + +L+ T I P RW+ +++ + ++T W PP W
Sbjct: 1019 SNIARVKHLVILDNFKLLHTVFPYISW-PLRWNKFCNVIENCSQDTKVTAVQWTKPPYRW 1077
Query: 412 LMCNTDGAS 438
+ NTDG++
Sbjct: 1078 VKLNTDGSA 1086
Score = 59.3 bits (142), Expect = 5e-07
Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 2/111 (1%)
Frame = +1
Query: 112 IVKWWIAPVTRRL-K*IFQEVSTIIIWKFWKRRNAIKHGEKRS-IERVIYQVYITIQRLV 285
I++WW + I Q I W WK R A K+G K+S I RV Y +Y +L+
Sbjct: 681 IMQWWSTKHNNAAYRLILQATPIFICWNLWKNRCASKYGGKQSNISRVKYAIYKDNYKLM 740
Query: 286 TTRNLSIKQVPHRWDHMIQMLKGGTTHLRITKDIWQFPPTGWLMCNTDGAS 438
TT IK P W ++Q+ + T ++T W P W+ NTDG++
Sbjct: 741 TTTFPQIKW-PSNWMELLQLGERCTHDTKVTMVKWIKPKKQWVKINTDGSA 790
>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 308
Score = 67.0 bits (162), Expect = 2e-09
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Frame = +1
Query: 58 YFSSFEGMNMEGLPLQ*RIVKWWIA-PVTRRLK*IFQEVSTIIIWKFWKRRNAIKHGEKR 234
+F++ G+ + LQ R+ +WW A P + + Q T I W WK R A K+G K
Sbjct: 20 FFAASAGLQADHSSLQARVQQWWTARPQNEGHQLLLQATPTFICWNLWKNRCACKYGAKA 79
Query: 235 S-IERVIYQVYITIQRLVTTRNLSIKQVPHRWDHMIQMLKGGTTHLRITKDIWQFPPTGW 411
+ I RV Y VY +++ IK P W +IQ + +++ W PP W
Sbjct: 80 TNISRVKYAVYKDTFKMLKIAFPHIKW-PASWTALIQTSEKCKHEIKVCMVAWNRPPEQW 138
Query: 412 LMCNTDGAS 438
+ NTDG++
Sbjct: 139 IKINTDGSA 147
>ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 375
Score = 61.6 bits (148), Expect = 1e-07
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Frame = +1
Query: 61 FSSFEGMNMEGLPLQ*RIVKWWIA-PVTRRLK*IFQEVSTIIIWKFWKRRNAIKHGEKRS 237
F++ G+ + +Q R+ +WW A P + + Q + I+W WK R A K+G K +
Sbjct: 113 FTTTAGLQEDQSSVQARLRQWWTARPRNASHQLLLQAMPIFIVWNLWKNRCACKYGGKST 172
Query: 238 -IERVIYQVYITIQRLVTTRNLSIKQV--PHRWDHMIQMLKGGTTHLRITKDIWQFPPTG 408
I RV Y VY +++ ++ +V P W +IQ + +++ W PP
Sbjct: 173 NISRVKYAVYKDTFKML---KIAFPRVNWPGNWAALIQTAERCKHEIKVCMTTWNRPPEQ 229
Query: 409 WLMCNTDGAS 438
W+ NTDG++
Sbjct: 230 WIKINTDGSA 239
>ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 308
Score = 61.2 bits (147), Expect = 1e-07
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Frame = +1
Query: 61 FSSFEGMNMEGLPLQ*RIVKWWIA-PVTRRLK*IFQEVSTIIIWKFWKRRNAIKHGEKRS 237
F++ G+ + LQ R+ KWW A P + + Q I W WK R A K+G K +
Sbjct: 21 FAASAGLQHDQTTLQARLEKWWTANPRNEGHQLLLQATPIFICWNLWKNRCASKYGGKAT 80
Query: 238 -IERVIYQVYITIQRLVTTRNLSIKQVPHRWDHMIQMLKGGTTHLRITKDIWQFPPTGWL 414
I RV Y +Y +++ I H W +I + +++ K W PP W+
Sbjct: 81 YISRVKYAIYKDNFKMMKNAFPHINWPAH-WTALITTSERCKHEIKVCKVTWNRPPEEWI 139
Query: 415 MCNTDGAS 438
NTDG++
Sbjct: 140 KINTDGSA 147
>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 668
Score = 60.5 bits (145), Expect = 2e-07
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 2/128 (1%)
Frame = +1
Query: 61 FSSFEGMNMEGLPLQ*RIVKWWIAPVTRRL-K*IFQEVSTIIIWKFWKRRNAIKHGEKRS 237
F++ G+ + +Q R+ +WW A + + + Q + I+W WK R A K+G K +
Sbjct: 384 FTTTAGLQEDQSSVQARLRQWWTARLRNASHQLLLQAMPIFIVWNLWKNRCACKYGGKST 443
Query: 238 -IERVIYQVYITIQRLVTTRNLSIKQVPHRWDHMIQMLKGGTTHLRITKDIWQFPPTGWL 414
I RV Y +Y +++ + I P W +IQ + +++ W PP W+
Sbjct: 444 NISRVKYAIYKDTFKMLKSAFPCINW-PGNWAALIQTAERCKHEIKVCMTTWNRPPEQWI 502
Query: 415 MCNTDGAS 438
NTDG++
Sbjct: 503 KINTDGSA 510
>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 58.2 bits (139), Expect = 1e-06
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Frame = +1
Query: 61 FSSFEGMNMEGLPLQ*RIVKWWIAPVTRRLK*IFQEVSTIII-WKFWKRRNAIKHGEKRS 237
F++ G+ + LQ R+ +WW A + + + I I W WK R A K+G K +
Sbjct: 488 FAAGAGLQQDQQTLQARLKQWWTAKSCNAGHQLLLQATPIFICWNLWKNRCACKYGGKAT 547
Query: 238 -IERVIYQVYITIQRLVTTRNLSIKQVPHRWDHMIQMLKGGTTHLRITKDIWQFPPTGWL 414
I RV Y VY +++ I Q P W +I + ++ + +W PP W+
Sbjct: 548 NISRVKYAVYKDNFKMMKNAFPHI-QWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWI 606
Query: 415 MCNTDGAS 438
NTDG++
Sbjct: 607 KINTDGSA 614
>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 468
Score = 57.8 bits (138), Expect = 2e-06
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Frame = +1
Query: 58 YFSSFEGMNMEGLPLQ*RIVKWWIA-PVTRRLK*IFQEVSTIIIWKFWKRRNAIKHGEK- 231
+F++ G+ + L I +WW P K + Q I W WK R A K+G K
Sbjct: 180 FFAATAGIQADHSTLPALIKQWWTTKPNNAGHKLLLQATPIFICWNLWKNRCACKYGGKG 239
Query: 232 RSIERVIYQVYITIQRLVTTRNLSIKQVPHRWDHMIQMLKGGTTHLRITKDIWQFPPTGW 411
+I RV Y +Y +++ SI P W +I + ++++ K W PP W
Sbjct: 240 TNISRVKYAIYKDTFKMLKNSFPSINW-PANWTTLILTSEKCVHNIKVYKVTWFKPPDQW 298
Query: 412 LMCNTDGAS 438
+ NTDG++
Sbjct: 299 IKINTDGSA 307
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 57.4 bits (137), Expect = 2e-06
Identities = 26/67 (38%), Positives = 38/67 (56%)
Frame = +1
Query: 61 FSSFEGMNMEGLPLQ*RIVKWWIAPVTRRLK*IFQEVSTIIIWKFWKRRNAIKHGEKRSI 240
FS+F G+ +E + LQ I+ WW +LK + + + TII+W WKRRN KH +
Sbjct: 968 FSNFAGIQIESMHLQQLIINWWKHSDNAKLKVVMRAMPTIIMWTLWKRRNNFKHRGTTTY 1027
Query: 241 ERVIYQV 261
V+ QV
Sbjct: 1028 SEVVMQV 1034
>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 1010
Score = 57.4 bits (137), Expect = 2e-06
Identities = 34/123 (27%), Positives = 64/123 (52%), Gaps = 2/123 (1%)
Frame = +1
Query: 76 GMNMEGLPLQ*RIVKWWIAPVTRRL-K*IFQEVSTIIIWKFWKRRNAIKHGEKR-SIERV 249
G++ + L+ ++ W PV ++ K ++Q + I W WK R A+KHG K+ S +RV
Sbjct: 728 GVHQDHANLRSLLLHWRNIPVHNQVQKLLYQILPNFICWNLWKNRCAVKHGSKQCSTQRV 787
Query: 250 IYQVYITIQRLVTTRNLSIKQVPHRWDHMIQMLKGGTTHLRITKDIWQFPPTGWLMCNTD 429
Y ++ + V +I + + D +I + + +++TK +W+ P G NTD
Sbjct: 788 QYAIFKDTMQAVMVAFPNISR-QNNLDMLINLAENCQQQVKVTKVMWEKPSLGIFKLNTD 846
Query: 430 GAS 438
G++
Sbjct: 847 GSA 849
>ref|XP_004253445.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 338
Score = 57.0 bits (136), Expect = 3e-06
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Frame = +1
Query: 61 FSSFEGMNMEGLPLQ*RIVKWWIA-PVTRRLK*IFQEVSTIIIWKFWKRRNAIKHG-EKR 234
F++ G+ + PLQ ++ +WW A P + + Q I+W WK A K+G
Sbjct: 51 FTAGAGLQADRTPLQAKLRQWWTARPRNEGHQLLLQATPVFIVWNLWKNICACKYGGTST 110
Query: 235 SIERVIYQVYITIQRLVTTRNLSIKQVPHRWDHMIQMLKGGTTHLRITKDIWQFPPTGWL 414
+I RV Y VY +++ I P W ++Q + ++++ W P W+
Sbjct: 111 NISRVKYAVYKDTFKMLKMAFPHINW-PGSWAALVQKAENCKHEIQVSMVTWNRPSEQWI 169
Query: 415 MCNTDGAS 438
NTDG++
Sbjct: 170 KINTDGSA 177
>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 57.0 bits (136), Expect = 3e-06
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Frame = +1
Query: 61 FSSFEGMNMEGLPLQ*RIVKWWIAPVTRRLK*IFQEVSTIII-WKFWKRRNAIKHGEKRS 237
F++ G+ + LQ R+ +WW A + + + I I W WK R A K+G K +
Sbjct: 488 FAAGAGLQEDQQTLQARLKQWWTAKSCNAGHQLLLQATPIFICWNLWKNRCACKYGGKAT 547
Query: 238 -IERVIYQVYITIQRLVTTRNLSIKQVPHRWDHMIQMLKGGTTHLRITKDIWQFPPTGWL 414
I RV Y VY +++ I Q P W +I + ++ + +W PP W+
Sbjct: 548 NISRVKYVVYKDNFKMMKNAFPHI-QWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWI 606
Query: 415 MCNTDGAS 438
NTDG++
Sbjct: 607 KINTDGSA 614