BLASTX nr result
ID: Atropa21_contig00030339
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00030339
(662 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A... 95 2e-20
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A... 87 2e-19
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 85 2e-15
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595... 68 3e-09
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A... 52 3e-08
ref|XP_004253277.1| PREDICTED: uncharacterized protein LOC101244... 51 2e-06
ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262... 49 5e-06
>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 885
Score = 94.7 bits (234), Expect(3) = 2e-20
Identities = 45/94 (47%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Frame = -3
Query: 552 MGFRGLQDISKALFAKL**NLRIK-ELL*RCYMSENYLKRNYIVIAQTKTNIYI*KKMLK 376
MG+R L DISKALFAKL N R L +M Y K+++ +IAQ + ++ ++M+
Sbjct: 347 MGWRSLHDISKALFAKLWWNFRTSTNTLWASFMWNKYCKKHHPIIAQGYGSSHVWRRMIS 406
Query: 375 FRDELEHDIWWMVK*GNSYFWWNNWTGLGALYHV 274
R+E+EH+IWW +K GNS FW++NWT GALYH+
Sbjct: 407 IREEVEHEIWWQIKAGNSSFWFDNWTKQGALYHI 440
Score = 26.9 bits (58), Expect(3) = 2e-20
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -1
Query: 662 LAQLHKIFAKFFLSNLISNSSRY 594
+ QLH+IFAKFF +N +++
Sbjct: 309 ITQLHRIFAKFFWANTAGAKNKH 331
Score = 23.9 bits (50), Expect(3) = 2e-20
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -2
Query: 235 VKEVAEGGQWNE*ALRELLPQDLVEHILHHIT 140
VKE G W++ L + L ++ +HI+ +I+
Sbjct: 451 VKEFCTGEGWDKEKLLQNLSLEMTDHIMENIS 482
>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 1035
Score = 86.7 bits (213), Expect(3) = 2e-19
Identities = 43/93 (46%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Frame = -3
Query: 552 MGFRGLQDISKALFAKL**NLRIKEL-L*RCYMSENYLKRNYIVIAQTKTNIYI*KKMLK 376
+GFR L +++KALFAKL N R+ L YM Y K+ + V+A + + +KM+
Sbjct: 317 LGFRSLHNMNKALFAKLWWNFRVSTTSLWVKYMWNKYCKKLHPVVATSLGASQVWRKMIS 376
Query: 375 FRDELEHDIWWMVK*GNSYFWWNNWTGLGALYH 277
R+E+EHDIWW +K GNS FW++NWT GALY+
Sbjct: 377 IREEVEHDIWWQIKAGNSSFWFDNWTRQGALYY 409
Score = 28.9 bits (63), Expect(3) = 2e-19
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = -2
Query: 208 WNE*ALRELLPQDLVEHILHHITLSTETE 122
W+E L++LL +++VEHI+ +I T E
Sbjct: 431 WDETKLKDLLSEEMVEHIILNIRPKTSEE 459
Score = 26.6 bits (57), Expect(3) = 2e-19
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -1
Query: 662 LAQLHKIFAKFFLSNL 615
L Q+H+IFAKFF NL
Sbjct: 279 LDQIHQIFAKFFWGNL 294
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 84.7 bits (208), Expect(2) = 2e-15
Identities = 41/94 (43%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
Frame = -3
Query: 552 MGFRGLQDISKALFAKL**NLRIK-ELL*RCYMSENYLKRNYIVIAQTKTNIYI*KKMLK 376
+GFR L D+SKA FAKL N R L +M Y K+ + +A+ + ++ +KM+
Sbjct: 723 LGFRSLHDVSKAFFAKLWWNFRTDTSSLWASFMWNKYCKKMHPTVARGQGASHVWRKMIT 782
Query: 375 FRDELEHDIWWMVK*GNSYFWWNNWTGLGALYHV 274
R+E+EH+IWW +K GNS FW++NWT GAL++V
Sbjct: 783 VREEVEHNIWWQIKAGNSSFWFDNWTKQGALWYV 816
Score = 24.3 bits (51), Expect(2) = 2e-15
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -1
Query: 656 QLHKIFAKFFLSN 618
QLHK+FA FF SN
Sbjct: 687 QLHKLFAIFFWSN 699
>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
Length = 866
Score = 67.8 bits (164), Expect = 3e-09
Identities = 49/126 (38%), Positives = 64/126 (50%), Gaps = 12/126 (9%)
Frame = -3
Query: 552 MGFRGLQDISKALFAKL**NLRIKELL*RCYMSENYLKRNYIVIAQTKTNIYI*KKMLKF 373
+GFR L DISKALF L R K L YM Y K+ + VIAQ+K + M+K
Sbjct: 465 VGFRSLADISKALFCILWWIFRTKTTLWSSYMGNKYCKKLHPVIAQSKGASATLRTMIKI 524
Query: 372 RDELEHDIWWMVK*GNSYFWWNNWTGLGALY---HVTSLDFECDHK*Y*S---------K 229
R+ +EH IWW +K G+S T GALY H TS + E + K + + +
Sbjct: 525 RELIEHQIWWQIKGGDSS------TTQGALYYFSHETSQEEEIEVKEFANQQGWKVDKLR 578
Query: 228 RWQRED 211
RW ED
Sbjct: 579 RWLSED 584
>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 1010
Score = 52.0 bits (123), Expect(2) = 3e-08
Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = -3
Query: 552 MGFRGLQDISKALFAKL**NLRIKELL*RCYMSENYLKRNYIVIAQTKTNIYI*KKML-K 376
+G R L D+ ++ K R K+ L ++ Y +R+ IV + T Y+ + L +
Sbjct: 480 IGVRLLDDVCRSFQYKHWWEFRTKDTLWSKFLKAKYCQRSNIVAKKFDTGDYVVWRYLTR 539
Query: 375 FRDELEHDIWWMVK*GNSYFWWNNWTGLGAL 283
R E+E I W + GN FWW+NW G GA+
Sbjct: 540 IRQEVEKYIKWNIHTGNCSFWWDNWIGDGAV 570
Score = 32.3 bits (72), Expect(2) = 3e-08
Identities = 16/52 (30%), Positives = 29/52 (55%)
Frame = -2
Query: 241 ILVKEVAEGGQWNE*ALRELLPQDLVEHILHHITLSTETEEMYIPIWRNESR 86
+ + E+ E G+W E +R+L+P LV +IL + + + E+ IW E +
Sbjct: 583 VKIAELTENGKWKERQVRQLVPPLLVPNILDTV-IQAKNEKSDYAIWTLEDK 633
>ref|XP_004253277.1| PREDICTED: uncharacterized protein LOC101244169 [Solanum
lycopersicum]
Length = 764
Score = 50.8 bits (120), Expect(2) = 2e-06
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Frame = -3
Query: 552 MGFRGLQDISKALFAKL**NLRIKELL*RCYMSENYLKRNYIVIAQTKT-NIYI*KKMLK 376
+G R L DI KA K + R K L ++ Y +R + V + T + + + + +
Sbjct: 412 IGVRLLDDICKAFQYKHWWDFRTKNSLWSNFLKSKYCQRAHPVAKKYNTGDSLMWRYLTR 471
Query: 375 FRDELEHDIWWMVK*GNSYFWWNNWTGLGALY----HVTSLD 262
R E+E I W ++ G S WW+NWTG GA+ HV+SL+
Sbjct: 472 NRIEVEVQIRWQIQSGTSNLWWDNWTGNGAIANYCDHVSSLN 513
Score = 27.3 bits (59), Expect(2) = 2e-06
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 241 ILVKEVAEGGQWNE*ALRELLPQDLVEHIL 152
+++ E G+WNE +R+ +P L+ HIL
Sbjct: 515 MVLAECLTNGKWNERFIRQHVPAILIPHIL 544
>ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262707 [Solanum
lycopersicum]
Length = 764
Score = 49.3 bits (116), Expect(2) = 5e-06
Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Frame = -3
Query: 552 MGFRGLQDISKALFAKL**NLRIKELL*RCYMSENYLKRNYIVIAQTKT-NIYI*KKMLK 376
+G R L DI KA K + R K L ++ Y +R + V + T + + + + +
Sbjct: 412 IGVRLLDDICKAFQYKHWWDFRTKHSLWSNFLMSKYCQRAHPVAKKYNTGDSLMWRYLTR 471
Query: 375 FRDELEHDIWWMVK*GNSYFWWNNWTGLGALY----HVTSLD 262
R E+E I W ++ G S WW+NWTG GA+ HV+SL+
Sbjct: 472 NRIEVEVHIRWHIQSGTSSLWWDNWTGNGAIANYCDHVSSLN 513
Score = 27.3 bits (59), Expect(2) = 5e-06
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = -2
Query: 241 ILVKEVAEGGQWNE*ALRELLPQDLVEHIL 152
+++ E G+WNE +R+ +P L+ HIL
Sbjct: 515 MVLAECLTNGKWNERFIRQHVPAILIPHIL 544