BLASTX nr result

ID: Atropa21_contig00030271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00030271
         (803 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004247466.1| PREDICTED: classical arabinogalactan protein...   120   7e-25
ref|XP_006359439.1| PREDICTED: classical arabinogalactan protein...   113   7e-23
ref|XP_006352805.1| PREDICTED: classical arabinogalactan protein...    77   9e-12
ref|XP_006389666.1| hydroxyproline-rich glycoprotein [Populus tr...    57   6e-06
ref|XP_002334007.1| predicted protein [Populus trichocarpa] gi|2...    57   6e-06

>ref|XP_004247466.1| PREDICTED: classical arabinogalactan protein 26-like [Solanum
           lycopersicum]
          Length = 177

 Score =  120 bits (300), Expect = 7e-25
 Identities = 76/155 (49%), Positives = 86/155 (55%)
 Frame = -3

Query: 756 SFHSKIVIALMASTSISTRLFLMQFVIFLVCHDFXXXXXXXXXXXLNVXXXXXXXXXXXX 577
           SF  K+ + LMASTSISTR FL+  VI                   ++            
Sbjct: 36  SFIPKLSLTLMASTSISTRFFLICVVI----------------NFFSLSLALHISPSSSI 79

Query: 576 XXXXXXXXXXXXXXPDISPLFPSPGGSELAPTDXXXXXXXXXXXXPNPDAMIAPGPIYMP 397
                         PDISPLFPSPGGSELAPTD            PNPDAMIAPGP+YMP
Sbjct: 80  SAAPALLPNPPALSPDISPLFPSPGGSELAPTDSSLPLIPSTPSPPNPDAMIAPGPLYMP 139

Query: 396 FSPTESLPVSSAVHLLSSLCTMLVLGLISFLFTQV 292
           FSPT+SLPVSSAV L SSLCTM+VL L+S  FTQ+
Sbjct: 140 FSPTQSLPVSSAVALFSSLCTMVVLSLMSTWFTQL 174


>ref|XP_006359439.1| PREDICTED: classical arabinogalactan protein 26-like [Solanum
           tuberosum]
          Length = 138

 Score =  113 bits (283), Expect = 7e-23
 Identities = 59/83 (71%), Positives = 63/83 (75%)
 Frame = -3

Query: 531 DISPLFPSPGGSELAPTDXXXXXXXXXXXXPNPDAMIAPGPIYMPFSPTESLPVSSAVHL 352
           DISPLFPSPGGSELAPTD            PNPDAMIAPGP+YMPFSPT+SLPVSSAV L
Sbjct: 56  DISPLFPSPGGSELAPTDSSLPLIPSSPSPPNPDAMIAPGPVYMPFSPTQSLPVSSAVPL 115

Query: 351 LSSLCTMLVLGLISFLFTQVHSV 283
            SSLCTM+VL LI   FTQ+  V
Sbjct: 116 FSSLCTMVVLSLILTWFTQLPGV 138


>ref|XP_006352805.1| PREDICTED: classical arabinogalactan protein 26-like [Solanum
           tuberosum]
          Length = 122

 Score = 76.6 bits (187), Expect = 9e-12
 Identities = 52/137 (37%), Positives = 65/137 (47%)
 Frame = -3

Query: 726 MASTSISTRLFLMQFVIFLVCHDFXXXXXXXXXXXLNVXXXXXXXXXXXXXXXXXXXXXX 547
           MASTS  T+ FL+  +IFL+C  F           ++                       
Sbjct: 1   MASTS--TKPFLIPLMIFLICQSFYSSVASMPASTISAAPALPPISSSPSLSP------- 51

Query: 546 XXXXPDISPLFPSPGGSELAPTDXXXXXXXXXXXXPNPDAMIAPGPIYMPFSPTESLPVS 367
                DI+PLFPSPGGSELAP+D            PNPDAM+APGP +MPF P+ S    
Sbjct: 52  -----DITPLFPSPGGSELAPSDSSLPTIPSTLSPPNPDAMVAPGP-FMPFQPSASFSFH 105

Query: 366 SAVHLLSSLCTMLVLGL 316
           SA+ L S    +LV GL
Sbjct: 106 SAIPLASVFSAILVFGL 122


>ref|XP_006389666.1| hydroxyproline-rich glycoprotein [Populus trichocarpa]
           gi|550312548|gb|ERP48580.1| hydroxyproline-rich
           glycoprotein [Populus trichocarpa]
          Length = 141

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 35/81 (43%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
 Frame = -3

Query: 531 DISPLFPSPGGSELAPTDXXXXXXXXXXXXPNPDAMIAPGPIYMPFSPTESLPVSSAVHL 352
           DI PLFP+PG    +PT+            PNPD M+APGP     SP+ SLP  S+V L
Sbjct: 56  DIEPLFPTPGVGAPSPTESSIPTIPSNPSPPNPDDMLAPGPAGSSISPSGSLPAYSSVSL 115

Query: 351 LSS--LCTMLVLGLISFLFTQ 295
            SS  L   + LGL+ F   Q
Sbjct: 116 TSSGPLNLAVFLGLLVFCLVQ 136


>ref|XP_002334007.1| predicted protein [Populus trichocarpa]
           gi|224132428|ref|XP_002321337.1| predicted protein
           [Populus trichocarpa]
          Length = 141

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 35/81 (43%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
 Frame = -3

Query: 531 DISPLFPSPGGSELAPTDXXXXXXXXXXXXPNPDAMIAPGPIYMPFSPTESLPVSSAVHL 352
           DI PLFP+PG    +PT+            PNPD M+APGP     SP+ SLP  S+V L
Sbjct: 56  DIEPLFPTPGVGAPSPTESSIPTIPSNPSPPNPDDMLAPGPAGSSISPSGSLPAYSSVSL 115

Query: 351 LSS--LCTMLVLGLISFLFTQ 295
            SS  L   + LGL+ F   Q
Sbjct: 116 TSSGPLNLAVFLGLLVFCLVQ 136


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