BLASTX nr result
ID: Atropa21_contig00030250
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00030250 (576 letters) Database: nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006356417.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 95 1e-17 ref|XP_004239401.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g... 70 5e-10 >ref|XP_006356417.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Solanum tuberosum] Length = 426 Score = 94.7 bits (234), Expect = 1e-17 Identities = 49/74 (66%), Positives = 56/74 (75%) Frame = +2 Query: 5 MEVDVNYFEGPGYGTQRLNNFQTLQMNRFYGSRAELLFIRFILASAPLLRKAILLVDTSV 184 ME DVN+F+GP YGTQ N Q L++ F G + ELLF+RFIL SAPLL K ILLVD SV Sbjct: 331 MEEDVNHFKGPAYGTQEFNKLQKLKIAAFRGLKPELLFVRFILRSAPLLLKTILLVDESV 390 Query: 185 NESQSLKISKELCG 226 NESQ LKIS+EL G Sbjct: 391 NESQYLKISEELRG 404 >ref|XP_004239401.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Solanum lycopersicum] Length = 443 Score = 69.7 bits (169), Expect = 5e-10 Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 2/90 (2%) Frame = +2 Query: 17 VNYFEGPGYGTQR-LNNFQTLQMNRFYGSRAELLFIRFILASAPLLRKAILLVDT-SVNE 190 VN+FEGP Y T L+ Q L +N F+GS+ E+ F++FI ASAP+L I+ D SV+E Sbjct: 341 VNHFEGPAYRTLGVLHKLQRLMINHFHGSKIEMFFVKFIFASAPVLLNTIIHEDVGSVDE 400 Query: 191 SQSLKISKELCGSLRHLRNQK*YSNLSSTK 280 SQSLKIS+EL R K + N S + Sbjct: 401 SQSLKISQELMSFPRASPKLKIHVNRRSNR 430