BLASTX nr result

ID: Atropa21_contig00030250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00030250
         (576 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356417.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    95   1e-17
ref|XP_004239401.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    70   5e-10

>ref|XP_006356417.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Solanum
           tuberosum]
          Length = 426

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 49/74 (66%), Positives = 56/74 (75%)
 Frame = +2

Query: 5   MEVDVNYFEGPGYGTQRLNNFQTLQMNRFYGSRAELLFIRFILASAPLLRKAILLVDTSV 184
           ME DVN+F+GP YGTQ  N  Q L++  F G + ELLF+RFIL SAPLL K ILLVD SV
Sbjct: 331 MEEDVNHFKGPAYGTQEFNKLQKLKIAAFRGLKPELLFVRFILRSAPLLLKTILLVDESV 390

Query: 185 NESQSLKISKELCG 226
           NESQ LKIS+EL G
Sbjct: 391 NESQYLKISEELRG 404


>ref|XP_004239401.1| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Solanum
           lycopersicum]
          Length = 443

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
 Frame = +2

Query: 17  VNYFEGPGYGTQR-LNNFQTLQMNRFYGSRAELLFIRFILASAPLLRKAILLVDT-SVNE 190
           VN+FEGP Y T   L+  Q L +N F+GS+ E+ F++FI ASAP+L   I+  D  SV+E
Sbjct: 341 VNHFEGPAYRTLGVLHKLQRLMINHFHGSKIEMFFVKFIFASAPVLLNTIIHEDVGSVDE 400

Query: 191 SQSLKISKELCGSLRHLRNQK*YSNLSSTK 280
           SQSLKIS+EL    R     K + N  S +
Sbjct: 401 SQSLKISQELMSFPRASPKLKIHVNRRSNR 430


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