BLASTX nr result
ID: Atropa21_contig00030104
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00030104
(654 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004241800.1| PREDICTED: transcription initiation factor T... 123 4e-26
ref|XP_006353658.1| PREDICTED: transcription initiation factor T... 117 3e-24
ref|XP_003631761.1| PREDICTED: transcription initiation factor T... 104 3e-20
ref|XP_002324907.2| hypothetical protein POPTR_0018s02430g [Popu... 101 2e-19
ref|XP_004145505.1| PREDICTED: transcription initiation factor T... 101 2e-19
emb|CAN63613.1| hypothetical protein VITISV_005881 [Vitis vinifera] 101 2e-19
gb|EMJ26351.1| hypothetical protein PRUPE_ppa002437mg [Prunus pe... 99 1e-18
ref|XP_002515435.1| protein with unknown function [Ricinus commu... 98 2e-18
gb|EOY29350.1| TBP-associated factor 5 isoform 2 [Theobroma cacao] 97 3e-18
gb|EOY29349.1| TBP-associated factor 5 isoform 1 [Theobroma cacao] 97 3e-18
ref|XP_002285276.2| PREDICTED: transcription initiation factor T... 96 9e-18
ref|XP_004291953.1| PREDICTED: transcription initiation factor T... 94 4e-17
ref|XP_003526182.1| PREDICTED: transcription initiation factor T... 93 8e-17
gb|ESW08944.1| hypothetical protein PHAVU_009G087600g [Phaseolus... 92 1e-16
ref|XP_006483465.1| PREDICTED: transcription initiation factor T... 92 2e-16
ref|XP_006483464.1| PREDICTED: transcription initiation factor T... 92 2e-16
ref|XP_006450297.1| hypothetical protein CICLE_v100076131mg, par... 92 2e-16
ref|XP_002309672.1| hypothetical protein POPTR_0006s27930g [Popu... 91 2e-16
ref|XP_006286673.1| hypothetical protein CARUB_v10002639mg [Caps... 91 3e-16
ref|XP_006394764.1| hypothetical protein EUTSA_v10003767mg [Eutr... 90 5e-16
>ref|XP_004241800.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
[Solanum lycopersicum]
Length = 685
Score = 123 bits (309), Expect = 4e-26
Identities = 60/69 (86%), Positives = 64/69 (92%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDVTTST+APLKEENKSG NNRLR LKTLPTKATP+YAL FSRRNLLFAAGAFSKS
Sbjct: 617 TVKLWDVTTSTRAPLKEENKSGGNNRLRLLKTLPTKATPIYALHFSRRNLLFAAGAFSKS 676
Query: 182 A*IPCLEVS 208
A +PC +VS
Sbjct: 677 ARVPCFKVS 685
>ref|XP_006353658.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
[Solanum tuberosum]
Length = 677
Score = 117 bits (293), Expect = 3e-24
Identities = 59/61 (96%), Positives = 59/61 (96%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDVTTSTKAPLKEENKSGSNNRLR LKTLPTKATPVYAL FSRRNLLFAAGAFSKS
Sbjct: 617 TVKLWDVTTSTKAPLKEENKSGSNNRLRLLKTLPTKATPVYALHFSRRNLLFAAGAFSKS 676
Query: 182 A 184
A
Sbjct: 677 A 677
>ref|XP_003631761.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
isoform 2 [Vitis vinifera] gi|296082065|emb|CBI21070.3|
unnamed protein product [Vitis vinifera]
Length = 676
Score = 104 bits (259), Expect = 3e-20
Identities = 51/60 (85%), Positives = 55/60 (91%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDVTTSTK P EENKSG+ +RLRSLKTLPTK+TPVY+LRFSRRNLLFAAGA SKS
Sbjct: 616 TVKLWDVTTSTKVPRSEENKSGNTSRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGALSKS 675
>ref|XP_002324907.2| hypothetical protein POPTR_0018s02430g [Populus trichocarpa]
gi|550317872|gb|EEF03472.2| hypothetical protein
POPTR_0018s02430g [Populus trichocarpa]
Length = 675
Score = 101 bits (252), Expect = 2e-19
Identities = 50/60 (83%), Positives = 54/60 (90%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDVTTSTKAP EE+KSG+ NRLR LKTLPTK+TPVY LRFSRRNLLFAAGA +KS
Sbjct: 615 TVKLWDVTTSTKAPRTEESKSGNTNRLRLLKTLPTKSTPVYTLRFSRRNLLFAAGALAKS 674
>ref|XP_004145505.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
[Cucumis sativus] gi|449485181|ref|XP_004157092.1|
PREDICTED: transcription initiation factor TFIID subunit
5-like [Cucumis sativus]
Length = 674
Score = 101 bits (251), Expect = 2e-19
Identities = 49/61 (80%), Positives = 56/61 (91%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDVT+STK P +ENK+G+ NRLRSLKTLPTK+TPVY+LRFSRRNLLFAAGA SK+
Sbjct: 611 TVKLWDVTSSTKPPRTDENKTGTPNRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGALSKN 670
Query: 182 A 184
A
Sbjct: 671 A 671
>emb|CAN63613.1| hypothetical protein VITISV_005881 [Vitis vinifera]
Length = 118
Score = 101 bits (251), Expect = 2e-19
Identities = 50/60 (83%), Positives = 54/60 (90%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDVTTSTK P EENKSG+ +RLRSLKTL TK+TPVY+LRFSRRNLLFAAGA SKS
Sbjct: 58 TVKLWDVTTSTKVPRSEENKSGNTSRLRSLKTLXTKSTPVYSLRFSRRNLLFAAGALSKS 117
>gb|EMJ26351.1| hypothetical protein PRUPE_ppa002437mg [Prunus persica]
Length = 673
Score = 98.6 bits (244), Expect = 1e-18
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDVT STK P EENKSG+ +RLRSLKTLPTK TPVY+LRFSRRNLLFAAG SK+
Sbjct: 613 TVKLWDVTASTKLPKTEENKSGNTSRLRSLKTLPTKCTPVYSLRFSRRNLLFAAGVLSKT 672
>ref|XP_002515435.1| protein with unknown function [Ricinus communis]
gi|223545379|gb|EEF46884.1| protein with unknown
function [Ricinus communis]
Length = 670
Score = 98.2 bits (243), Expect = 2e-18
Identities = 49/60 (81%), Positives = 53/60 (88%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDVT+STK EE+KSGS NRLRSLKTLPTK+TPVY+LRFSRRNLLFAAG SKS
Sbjct: 610 TVKLWDVTSSTKVTKAEESKSGSANRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGVLSKS 669
>gb|EOY29350.1| TBP-associated factor 5 isoform 2 [Theobroma cacao]
Length = 571
Score = 97.4 bits (241), Expect = 3e-18
Identities = 50/60 (83%), Positives = 53/60 (88%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDVTTSTK P K E KSG+ NRLRSLKTLPTK TPVY+LRFSRRNLLFAAGA SK+
Sbjct: 512 TVKLWDVTTSTKVP-KNEEKSGNPNRLRSLKTLPTKLTPVYSLRFSRRNLLFAAGALSKN 570
>gb|EOY29349.1| TBP-associated factor 5 isoform 1 [Theobroma cacao]
Length = 701
Score = 97.4 bits (241), Expect = 3e-18
Identities = 50/60 (83%), Positives = 53/60 (88%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDVTTSTK P K E KSG+ NRLRSLKTLPTK TPVY+LRFSRRNLLFAAGA SK+
Sbjct: 642 TVKLWDVTTSTKVP-KNEEKSGNPNRLRSLKTLPTKLTPVYSLRFSRRNLLFAAGALSKN 700
>ref|XP_002285276.2| PREDICTED: transcription initiation factor TFIID subunit 5-like
isoform 1 [Vitis vinifera]
Length = 667
Score = 95.9 bits (237), Expect = 9e-18
Identities = 49/60 (81%), Positives = 53/60 (88%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDVTTSTK P EEN G+ +RLRSLKTLPTK+TPVY+LRFSRRNLLFAAGA SKS
Sbjct: 609 TVKLWDVTTSTKVPRSEEN--GNTSRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGALSKS 666
>ref|XP_004291953.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
[Fragaria vesca subsp. vesca]
Length = 666
Score = 94.0 bits (232), Expect = 4e-17
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWD+T STK P K E KSGS +RLRSLKTLPTK+TPVY+LRFSRRNLLFAAG SKS
Sbjct: 607 TVKLWDITASTKLP-KAEEKSGSASRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGVLSKS 665
>ref|XP_003526182.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
[Glycine max]
Length = 663
Score = 92.8 bits (229), Expect = 8e-17
Identities = 49/60 (81%), Positives = 51/60 (85%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDV TSTK EE K GS NRLRSLKTLPTK+TPVY+LRFSRRNLLFAAGA SKS
Sbjct: 604 TVKLWDVNTSTKVSRAEE-KGGSANRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGALSKS 662
>gb|ESW08944.1| hypothetical protein PHAVU_009G087600g [Phaseolus vulgaris]
Length = 672
Score = 92.0 bits (227), Expect = 1e-16
Identities = 48/60 (80%), Positives = 52/60 (86%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDV TSTK EE KSG+ NRLRSLKTLPTK+TPVY+LRFSRRNLLFAAGA +KS
Sbjct: 613 TVKLWDVNTSTKVSRAEE-KSGNANRLRSLKTLPTKSTPVYSLRFSRRNLLFAAGALAKS 671
>ref|XP_006483465.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
isoform X2 [Citrus sinensis]
Length = 670
Score = 91.7 bits (226), Expect = 2e-16
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDVTTSTK LK E KSG+N RLRSLKTLPTK+TPVY+L+FSRRNLLFAAGA SK+
Sbjct: 612 TVKLWDVTTSTKV-LKTEEKSGTN-RLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 669
Query: 182 A 184
+
Sbjct: 670 S 670
>ref|XP_006483464.1| PREDICTED: transcription initiation factor TFIID subunit 5-like
isoform X1 [Citrus sinensis]
Length = 698
Score = 91.7 bits (226), Expect = 2e-16
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDVTTSTK LK E KSG+N RLRSLKTLPTK+TPVY+L+FSRRNLLFAAGA SK+
Sbjct: 640 TVKLWDVTTSTKV-LKTEEKSGTN-RLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 697
Query: 182 A 184
+
Sbjct: 698 S 698
>ref|XP_006450297.1| hypothetical protein CICLE_v100076131mg, partial [Citrus
clementina] gi|557553523|gb|ESR63537.1| hypothetical
protein CICLE_v100076131mg, partial [Citrus clementina]
Length = 611
Score = 91.7 bits (226), Expect = 2e-16
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDVTTSTK LK E KSG+N RLRSLKTLPTK+TPVY+L+FSRRNLLFAAGA SK+
Sbjct: 553 TVKLWDVTTSTKV-LKTEEKSGTN-RLRSLKTLPTKSTPVYSLQFSRRNLLFAAGALSKT 610
Query: 182 A 184
+
Sbjct: 611 S 611
>ref|XP_002309672.1| hypothetical protein POPTR_0006s27930g [Populus trichocarpa]
gi|222855648|gb|EEE93195.1| hypothetical protein
POPTR_0006s27930g [Populus trichocarpa]
Length = 675
Score = 91.3 bits (225), Expect = 2e-16
Identities = 46/60 (76%), Positives = 51/60 (85%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDVTTSTK EE+KSG+ +RLR LKTLPTK+TPV LRFSRRNLLFAAGA S+S
Sbjct: 615 TVKLWDVTTSTKPAKTEESKSGNTHRLRFLKTLPTKSTPVSTLRFSRRNLLFAAGALSRS 674
>ref|XP_006286673.1| hypothetical protein CARUB_v10002639mg [Capsella rubella]
gi|482555379|gb|EOA19571.1| hypothetical protein
CARUB_v10002639mg [Capsella rubella]
Length = 668
Score = 90.9 bits (224), Expect = 3e-16
Identities = 46/61 (75%), Positives = 54/61 (88%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDVT+STK+ K E K+G++NRLRSL+T PTK+TPV+ALRFSRRNLLFAAGA SK
Sbjct: 608 TVKLWDVTSSTKST-KAEEKNGNSNRLRSLRTFPTKSTPVHALRFSRRNLLFAAGALSKP 666
Query: 182 A 184
A
Sbjct: 667 A 667
>ref|XP_006394764.1| hypothetical protein EUTSA_v10003767mg [Eutrema salsugineum]
gi|557091403|gb|ESQ32050.1| hypothetical protein
EUTSA_v10003767mg [Eutrema salsugineum]
Length = 669
Score = 90.1 bits (222), Expect = 5e-16
Identities = 46/61 (75%), Positives = 53/61 (86%)
Frame = +2
Query: 2 TVKLWDVTTSTKAPLKEENKSGSNNRLRSLKTLPTKATPVYALRFSRRNLLFAAGAFSKS 181
TVKLWDVT+STK K E K+G++NRLRSL+T PTK+TPV+ALRFSRRNLLFAAGA SK
Sbjct: 609 TVKLWDVTSSTKLT-KAEEKNGNSNRLRSLRTFPTKSTPVHALRFSRRNLLFAAGALSKP 667
Query: 182 A 184
A
Sbjct: 668 A 668