BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00030065
         (699 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004246092.1| PREDICTED: putative F-box protein At3g25750-...    91   5e-16
ref|XP_006361816.1| PREDICTED: F-box protein SKIP23-like [Solanu...    87   7e-15
ref|XP_006366271.1| PREDICTED: F-box protein At2g26160-like isof...    80   8e-13
ref|XP_004253366.1| PREDICTED: putative F-box protein At3g25750-...    76   1e-11
ref|XP_006342248.1| PREDICTED: putative F-box protein At3g25750-...    69   2e-09
ref|XP_004238423.1| PREDICTED: putative F-box protein At1g65770-...    69   2e-09
ref|XP_006342124.1| PREDICTED: putative F-box protein At3g25750-...    68   2e-09
ref|XP_006342123.1| PREDICTED: F-box protein At2g17690-like [Sol...    67   4e-09
ref|XP_006344414.1| PREDICTED: putative F-box protein At5g55150-...    58   3e-06

>ref|XP_004246092.1| PREDICTED: putative F-box protein At3g25750-like [Solanum
           lycopersicum]
          Length = 372

 Score = 90.5 bits (223), Expect = 5e-16
 Identities = 46/83 (55%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
 Frame = -3

Query: 262 FYLVDVCGTLLLVSRFFDKKTI-YQTIKFKVYELDLIKGELMEEEINNLGDSTILLGFGS 86
           FYLV++   LL V RF       ++T KFKV ELDLI+GEL E+EI  LGDS   LGF +
Sbjct: 243 FYLVELSDALLFVIRFAHYSNGGHKTFKFKVVELDLIEGELKEKEIKTLGDSAFFLGFNT 302

Query: 85  ATSSVDSSKFTGVKANHIYFTDE 17
               +DSSKF+G+K NHIYFTD+
Sbjct: 303 GACCIDSSKFSGIKPNHIYFTDD 325


>ref|XP_006361816.1| PREDICTED: F-box protein SKIP23-like [Solanum tuberosum]
          Length = 614

 Score = 86.7 bits (213), Expect = 7e-15
 Identities = 50/93 (53%), Positives = 68/93 (73%), Gaps = 5/93 (5%)
 Frame = -3

Query: 274 NSN*FYLVDVCGTLLLVSRFFDKKT----IYQTIKFKVYELDLIKGELMEEEINNLGDST 107
           +S  FYLVDV   LLLV+RF  +++      +T+KF++YELD++KG +  +EINNLGDST
Sbjct: 479 HSTQFYLVDVNDALLLVARFGRRRSNASRALKTVKFELYELDVVKGNM--KEINNLGDST 536

Query: 106 ILLGFGSATSSVDSSKFTGV-KANHIYFTDELY 11
           I +G   AT S+DS+KFTGV K N IYFTD+ +
Sbjct: 537 IFVGCNGAT-SIDSTKFTGVIKPNQIYFTDDWF 568



 Score = 73.6 bits (179), Expect = 6e-11
 Identities = 49/124 (39%), Positives = 76/124 (61%), Gaps = 5/124 (4%)
 Frame = -3

Query: 373 SSITIIEGKTILRHSDKFMMSLNGSSCTVHIFLNSN*FYLVDVCGTLLLVSRF----FDK 206
           + I +++ ++  R  +  ++ LN +     +F +S  +YLV V   LL V+RF     + 
Sbjct: 214 AEIWVVDVQSRDRRVESHLIYLNDNK---DLFRHSTQYYLVVVNNALLFVARFGRNRSND 270

Query: 205 KTIYQTIKFKVYELDLIKGELMEEEINNLGDSTILLGFGSATSSVDSSKFTG-VKANHIY 29
            +  +T K +VYE+D +K +L  + I+NLGDSTI LG   A S +DS+KFTG +K NHIY
Sbjct: 271 NSAVETFKCEVYEVDEMKCKL--KRIDNLGDSTIFLGLNGAIS-IDSTKFTGAIKPNHIY 327

Query: 28  FTDE 17
           FTD+
Sbjct: 328 FTDD 331


>ref|XP_006366271.1| PREDICTED: F-box protein At2g26160-like isoform X1 [Solanum
           tuberosum] gi|565401574|ref|XP_006366272.1| PREDICTED:
           F-box protein At2g26160-like isoform X2 [Solanum
           tuberosum] gi|565401576|ref|XP_006366273.1| PREDICTED:
           F-box protein At2g26160-like isoform X3 [Solanum
           tuberosum] gi|565401578|ref|XP_006366274.1| PREDICTED:
           F-box protein At2g26160-like isoform X4 [Solanum
           tuberosum] gi|565401580|ref|XP_006366275.1| PREDICTED:
           F-box protein At2g26160-like isoform X5 [Solanum
           tuberosum]
          Length = 368

 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
 Frame = -3

Query: 262 FYLVDVCGTLLLVSRFFDKK--TIYQTIKFKVYELDLIKGELMEEEINNLGDSTILLGFG 89
           +Y V++ G LL + RF +    + Y+TIKFKV+E+D+IK +L   EIN LGDSTI LG  
Sbjct: 242 YYFVEISGALLFLIRFLNNTYTSDYETIKFKVFEIDVIKDQL--NEINTLGDSTIFLGRN 299

Query: 88  SATSSVDSSKFTGVKANHIYFTDELY 11
            AT+ V     TG+K NHIYFTD+++
Sbjct: 300 GATAMV-----TGLKPNHIYFTDDVF 320


>ref|XP_004253366.1| PREDICTED: putative F-box protein At3g25750-like [Solanum
           lycopersicum]
          Length = 378

 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 40/85 (47%), Positives = 59/85 (69%), Gaps = 3/85 (3%)
 Frame = -3

Query: 262 FYLVDVCGTLLLVSRF---FDKKTIYQTIKFKVYELDLIKGELMEEEINNLGDSTILLGF 92
           +YLV++ G L  V R+   F+    Y+T KF+V+E+DL+KGEL  E I  LG+  + LG 
Sbjct: 247 YYLVELSGALSFVIRYACQFEDHR-YKTYKFEVFEVDLVKGELKMEPIKTLGNLAVFLG- 304

Query: 91  GSATSSVDSSKFTGVKANHIYFTDE 17
            +A+ S++SSKF G+K N+IYFTD+
Sbjct: 305 SNASCSIESSKFIGIKPNYIYFTDD 329


>ref|XP_006342248.1| PREDICTED: putative F-box protein At3g25750-like [Solanum
           tuberosum]
          Length = 368

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 36/88 (40%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
 Frame = -3

Query: 277 LNSN*FYLVDVCGTLLLVSRFF---DKKTIYQTIKFKVYELDLIKGELMEEEINNLGDST 107
           ++++ ++L++V G LL V +     D    ++T KF+++++D+I+GE   +EI +LGD  
Sbjct: 235 IDASRYFLIEVSGELLFVQQLMITEDASNGWKTNKFRLFKIDVIRGEA--KEIKSLGDKA 292

Query: 106 ILLGFGSATSSVDSSKFTGVKANHIYFT 23
           I +G  +A+ ++DSSKF GVK NHIYFT
Sbjct: 293 IFVGC-NASIAIDSSKFVGVKPNHIYFT 319


>ref|XP_004238423.1| PREDICTED: putative F-box protein At1g65770-like [Solanum
           lycopersicum]
          Length = 372

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
 Frame = -3

Query: 274 NSN*FYLVDVCGTLLLVSRFF---DKKTIYQTIKFKVYELDLIKGELMEEEINNLGDSTI 104
           N +  +L++V G LL V +     D   + +T KF+++++D IKGE   EEI +LGD  I
Sbjct: 240 NQSAHFLIEVSGELLFVQQLMIVKDVANVSKTYKFRLFKIDAIKGEA--EEIKSLGDKAI 297

Query: 103 LLGFGSATSSVDSSKFTGVKANHIYFT 23
            +G  +A+ ++D SKF GVK NHIYFT
Sbjct: 298 YVGC-NASIAIDCSKFVGVKPNHIYFT 323


>ref|XP_006342124.1| PREDICTED: putative F-box protein At3g25750-like isoform X1
           [Solanum tuberosum] gi|565350334|ref|XP_006342125.1|
           PREDICTED: putative F-box protein At3g25750-like isoform
           X2 [Solanum tuberosum]
          Length = 372

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
 Frame = -3

Query: 274 NSN*FYLVDVCGTLLLVSRFF---DKKTIYQTIKFKVYELDLIKGELMEEEINNLGDSTI 104
           N    +L++V G LL V +     D   +++T KF+++++D IKGE   +EI +LGD  I
Sbjct: 240 NQRFVFLIEVAGELLFVQQLVITKDVANVWKTYKFRLFKIDAIKGEA--KEIKSLGDKAI 297

Query: 103 LLGFGSATSSVDSSKFTGVKANHIYFT 23
            +G  +A+ ++DSSK  GVK NHIYFT
Sbjct: 298 FVGC-NASIAIDSSKLVGVKPNHIYFT 323


>ref|XP_006342123.1| PREDICTED: F-box protein At2g17690-like [Solanum tuberosum]
          Length = 369

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 36/88 (40%), Positives = 61/88 (69%), Gaps = 3/88 (3%)
 Frame = -3

Query: 277 LNSN*FYLVDVCGTLLLVSRFFDKKTI---YQTIKFKVYELDLIKGELMEEEINNLGDST 107
           ++++ ++L++V G LL V +    + +   ++T KF+++++D+I+GE   +EI +LGD  
Sbjct: 236 IDASRYFLIEVSGELLFVQQLMITENVPNGWKTNKFRLFKIDVIRGEA--KEIKSLGDKA 293

Query: 106 ILLGFGSATSSVDSSKFTGVKANHIYFT 23
           I +G  +A+ SVDSSK  GVK NHIYFT
Sbjct: 294 IFVGC-NASISVDSSKLVGVKPNHIYFT 320


>ref|XP_006344414.1| PREDICTED: putative F-box protein At5g55150-like [Solanum
           tuberosum]
          Length = 393

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 32/83 (38%), Positives = 48/83 (57%)
 Frame = -3

Query: 259 YLVDVCGTLLLVSRFFDKKTIYQTIKFKVYELDLIKGELMEEEINNLGDSTILLGFGSAT 80
           YL D C  + L     ++   Y T  F+V+++DL  G++ E     LGD    +G+ +A+
Sbjct: 269 YLRDDCDRIPLTDE--EEDLTYGTTDFRVFQVDLASGKVTETR--ELGDRAFFVGY-NAS 323

Query: 79  SSVDSSKFTGVKANHIYFTDELY 11
            SV +SKF G+K NHIYFTD  +
Sbjct: 324 LSVQASKFLGIKPNHIYFTDHYF 346