BLASTX nr result
ID: Atropa21_contig00030013
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00030013
(639 letters)
Database: nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006357217.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 78 2e-12
ref|XP_004238735.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 76 7e-12
gb|EMJ28235.1| hypothetical protein PRUPE_ppa000444mg [Prunus pe... 75 2e-11
gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth... 75 2e-11
gb|EXB74741.1| DEAD-box ATP-dependent RNA helicase ISE2 [Morus n... 74 3e-11
ref|XP_004298595.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 74 4e-11
ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 74 4e-11
emb|CBI32069.3| unnamed protein product [Vitis vinifera] 74 4e-11
emb|CAN76232.1| hypothetical protein VITISV_039406 [Vitis vinifera] 74 4e-11
ref|XP_004517036.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 73 6e-11
gb|EOY00292.1| DEAD/DEAH box helicase, putative isoform 3 [Theob... 72 1e-10
gb|EOY00291.1| DEAD/DEAH box helicase, putative isoform 2 [Theob... 72 1e-10
gb|EOY00290.1| DEAD/DEAH box helicase, putative isoform 1 [Theob... 72 1e-10
ref|XP_002315703.2| hypothetical protein POPTR_0010s04800g [Popu... 71 2e-10
ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago tr... 70 4e-10
gb|ESW29525.1| hypothetical protein PHAVU_002G077700g [Phaseolus... 69 9e-10
ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 69 9e-10
ref|XP_002520197.1| helicase, putative [Ricinus communis] gi|223... 69 1e-09
ref|XP_006300303.1| hypothetical protein CARUB_v10019751mg [Caps... 68 2e-09
ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 68 2e-09
>ref|XP_006357217.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like isoform X1 [Solanum tuberosum]
Length = 1156
Score = 77.8 bits (190), Expect = 2e-12
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTIDLLAQVPKLPDIDPLLQ NAKSA+NVMDRPPISELAG
Sbjct: 1117 RTIDLLAQVPKLPDIDPLLQINAKSASNVMDRPPISELAG 1156
>ref|XP_004238735.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Solanum lycopersicum]
Length = 1154
Score = 76.3 bits (186), Expect = 7e-12
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTIDLLAQVPKLPDIDPLLQ NAKSA+N MDRPPISELAG
Sbjct: 1115 RTIDLLAQVPKLPDIDPLLQINAKSASNAMDRPPISELAG 1154
>gb|EMJ28235.1| hypothetical protein PRUPE_ppa000444mg [Prunus persica]
Length = 1178
Score = 75.1 bits (183), Expect = 2e-11
Identities = 34/40 (85%), Positives = 39/40 (97%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTIDLL Q+PKLPDIDPLLQ+NAK+A+N+MDRPPISELAG
Sbjct: 1139 RTIDLLVQIPKLPDIDPLLQSNAKTASNIMDRPPISELAG 1178
>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
Length = 1159
Score = 74.7 bits (182), Expect = 2e-11
Identities = 35/40 (87%), Positives = 39/40 (97%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTIDLLAQ+PKLPDIDPLLQ+NAK A++VMDRPPISELAG
Sbjct: 1120 RTIDLLAQIPKLPDIDPLLQSNAKGASSVMDRPPISELAG 1159
>gb|EXB74741.1| DEAD-box ATP-dependent RNA helicase ISE2 [Morus notabilis]
Length = 1123
Score = 74.3 bits (181), Expect = 3e-11
Identities = 35/40 (87%), Positives = 40/40 (100%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTIDLLAQVPKLPDIDP+LQ+NA+SA++VMDRPPISELAG
Sbjct: 1084 RTIDLLAQVPKLPDIDPVLQSNARSASDVMDRPPISELAG 1123
>ref|XP_004298595.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 1176
Score = 73.9 bits (180), Expect = 4e-11
Identities = 33/40 (82%), Positives = 39/40 (97%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTIDLL Q+PKLPDIDP+LQ+NAK+A+N+MDRPPISELAG
Sbjct: 1137 RTIDLLVQIPKLPDIDPVLQSNAKTASNIMDRPPISELAG 1176
>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Vitis vinifera]
Length = 1174
Score = 73.9 bits (180), Expect = 4e-11
Identities = 34/40 (85%), Positives = 39/40 (97%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTID+LAQ+PKLPDIDPLLQ+NA +A+NVMDRPPISELAG
Sbjct: 1135 RTIDILAQIPKLPDIDPLLQSNAMTASNVMDRPPISELAG 1174
>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
Length = 1064
Score = 73.9 bits (180), Expect = 4e-11
Identities = 34/40 (85%), Positives = 39/40 (97%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTID+LAQ+PKLPDIDPLLQ+NA +A+NVMDRPPISELAG
Sbjct: 1025 RTIDILAQIPKLPDIDPLLQSNAMTASNVMDRPPISELAG 1064
>emb|CAN76232.1| hypothetical protein VITISV_039406 [Vitis vinifera]
Length = 239
Score = 73.9 bits (180), Expect = 4e-11
Identities = 34/40 (85%), Positives = 39/40 (97%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTID+LAQ+PKLPDIDPLLQ+NA +A+NVMDRPPISELAG
Sbjct: 200 RTIDILAQIPKLPDIDPLLQSNAMTASNVMDRPPISELAG 239
>ref|XP_004517036.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Cicer arietinum]
Length = 1165
Score = 73.2 bits (178), Expect = 6e-11
Identities = 34/40 (85%), Positives = 39/40 (97%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTIDLLAQ+PKLPDIDPLLQ NA++A++VMDRPPISELAG
Sbjct: 1126 RTIDLLAQIPKLPDIDPLLQRNARAASDVMDRPPISELAG 1165
>gb|EOY00292.1| DEAD/DEAH box helicase, putative isoform 3 [Theobroma cacao]
Length = 813
Score = 72.0 bits (175), Expect = 1e-10
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTIDLLAQ+PKLPDIDPLLQ NA +A++VMDRPPISELAG
Sbjct: 774 RTIDLLAQIPKLPDIDPLLQKNATAASDVMDRPPISELAG 813
>gb|EOY00291.1| DEAD/DEAH box helicase, putative isoform 2 [Theobroma cacao]
Length = 1031
Score = 72.0 bits (175), Expect = 1e-10
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTIDLLAQ+PKLPDIDPLLQ NA +A++VMDRPPISELAG
Sbjct: 992 RTIDLLAQIPKLPDIDPLLQKNATAASDVMDRPPISELAG 1031
>gb|EOY00290.1| DEAD/DEAH box helicase, putative isoform 1 [Theobroma cacao]
Length = 1167
Score = 72.0 bits (175), Expect = 1e-10
Identities = 34/40 (85%), Positives = 38/40 (95%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTIDLLAQ+PKLPDIDPLLQ NA +A++VMDRPPISELAG
Sbjct: 1128 RTIDLLAQIPKLPDIDPLLQKNATAASDVMDRPPISELAG 1167
>ref|XP_002315703.2| hypothetical protein POPTR_0010s04800g [Populus trichocarpa]
gi|550329078|gb|EEF01874.2| hypothetical protein
POPTR_0010s04800g [Populus trichocarpa]
Length = 1180
Score = 71.2 bits (173), Expect = 2e-10
Identities = 31/40 (77%), Positives = 39/40 (97%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTID+LAQ+PKLPDIDP+LQ+NAK+A+++MDRPPISEL G
Sbjct: 1141 RTIDILAQIPKLPDIDPVLQSNAKTASSIMDRPPISELTG 1180
>ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula]
gi|355514772|gb|AES96395.1| ATP-dependent RNA helicase
DOB1 [Medicago truncatula]
Length = 1201
Score = 70.5 bits (171), Expect = 4e-10
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTIDLLAQ+P LPDIDPLLQ NA++A +VMDRPPISELAG
Sbjct: 1150 RTIDLLAQIPNLPDIDPLLQKNARAACDVMDRPPISELAG 1189
>gb|ESW29525.1| hypothetical protein PHAVU_002G077700g [Phaseolus vulgaris]
Length = 1165
Score = 69.3 bits (168), Expect = 9e-10
Identities = 32/40 (80%), Positives = 36/40 (90%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTID+L Q+PKLPDIDPLLQ NAK+A+ VMDRPPISEL G
Sbjct: 1126 RTIDILVQIPKLPDIDPLLQRNAKAASAVMDRPPISELVG 1165
>ref|XP_003517748.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Glycine max]
Length = 1162
Score = 69.3 bits (168), Expect = 9e-10
Identities = 32/40 (80%), Positives = 37/40 (92%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTIDLL Q+PKLPDIDPLL+ NAK+A++VMDRPPISEL G
Sbjct: 1123 RTIDLLVQIPKLPDIDPLLKHNAKAASSVMDRPPISELVG 1162
>ref|XP_002520197.1| helicase, putative [Ricinus communis] gi|223540689|gb|EEF42252.1|
helicase, putative [Ricinus communis]
Length = 1161
Score = 68.9 bits (167), Expect = 1e-09
Identities = 31/40 (77%), Positives = 38/40 (95%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
+TIDLLAQ+PKLPDIDP LQ+NAK+A ++MDRPPISEL+G
Sbjct: 1122 QTIDLLAQIPKLPDIDPALQSNAKTAYDIMDRPPISELSG 1161
>ref|XP_006300303.1| hypothetical protein CARUB_v10019751mg [Capsella rubella]
gi|482569013|gb|EOA33201.1| hypothetical protein
CARUB_v10019751mg [Capsella rubella]
Length = 913
Score = 68.2 bits (165), Expect = 2e-09
Identities = 31/40 (77%), Positives = 37/40 (92%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTIDLLAQ+PKLPDIDP+LQ +A +A ++MDRPPISELAG
Sbjct: 874 RTIDLLAQIPKLPDIDPVLQRSAAAAADIMDRPPISELAG 913
>ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
chloroplastic-like [Cucumis sativus]
Length = 1168
Score = 68.2 bits (165), Expect = 2e-09
Identities = 32/40 (80%), Positives = 37/40 (92%)
Frame = +3
Query: 3 RTIDLLAQVPKLPDIDPLLQTNAKSATNVMDRPPISELAG 122
RTIDLLAQ+PKLPDIDP LQ NA +A++VM+RPPISELAG
Sbjct: 1129 RTIDLLAQIPKLPDIDPSLQRNASTASDVMNRPPISELAG 1168