BLASTX nr result

ID: Atropa21_contig00029154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00029154
         (556 letters)

Database: nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004234996.1| PREDICTED: uncharacterized protein LOC101267...    67   4e-09
gb|EMJ19504.1| hypothetical protein PRUPE_ppa010843mg [Prunus pe...    66   6e-09
ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265...    66   6e-09
emb|CBI23047.3| unnamed protein product [Vitis vinifera]               66   6e-09
ref|XP_006350504.1| PREDICTED: U1 small nuclear ribonucleoprotei...    65   1e-08
gb|AFY26894.1| RNA-binding protein with multiple splicing [Morel...    64   2e-08
ref|XP_002515833.1| nucleic acid binding protein, putative [Rici...    64   2e-08
gb|EOY23631.1| RNA-binding family protein isoform 1 [Theobroma c...    64   3e-08
ref|XP_004307948.1| PREDICTED: uncharacterized protein LOC101301...    64   3e-08
ref|XP_006374094.1| hypothetical protein POPTR_0015s01130g [Popu...    63   5e-08
ref|XP_002321981.1| hypothetical protein POPTR_0015s01130g [Popu...    63   5e-08
ref|XP_006441170.1| hypothetical protein CICLE_v10022008mg [Citr...    62   7e-08
gb|EXC21403.1| hypothetical protein L484_011845 [Morus notabilis]      62   9e-08
ref|XP_004146235.1| PREDICTED: uncharacterized protein LOC101218...    62   9e-08
ref|XP_002317797.1| hypothetical protein POPTR_0012s02630g [Popu...    62   9e-08
ref|XP_006360155.1| PREDICTED: U1 small nuclear ribonucleoprotei...    61   2e-07
ref|XP_004240963.1| PREDICTED: uncharacterized protein LOC101261...    61   2e-07
ref|XP_004502691.1| PREDICTED: uncharacterized protein LOC101494...    58   1e-06
ref|XP_006851878.1| hypothetical protein AMTR_s00041p00116460 [A...    57   2e-06
gb|AEZ00900.1| putative RNA recognition motif-containing protein...    57   2e-06

>ref|XP_004234996.1| PREDICTED: uncharacterized protein LOC101267497 [Solanum
           lycopersicum]
          Length = 231

 Score = 66.6 bits (161), Expect = 4e-09
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRGNH 102
           GYK +EHDRDS NLRLQFARRPGARSGGG+RG H
Sbjct: 198 GYKLDEHDRDSPNLRLQFARRPGARSGGGYRGKH 231


>gb|EMJ19504.1| hypothetical protein PRUPE_ppa010843mg [Prunus persica]
          Length = 233

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GYKF+EHDRDS NLRLQFAR PGARSGGGHRG
Sbjct: 200 GYKFDEHDRDSVNLRLQFARYPGARSGGGHRG 231


>ref|XP_002275189.2| PREDICTED: uncharacterized protein LOC100265772 [Vitis vinifera]
          Length = 229

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GYKF+EHDRDS NLRLQFAR PGARSGGGHRG
Sbjct: 196 GYKFDEHDRDSVNLRLQFARYPGARSGGGHRG 227


>emb|CBI23047.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 29/32 (90%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GYKF+EHDRDS NLRLQFAR PGARSGGGHRG
Sbjct: 197 GYKFDEHDRDSVNLRLQFARYPGARSGGGHRG 228


>ref|XP_006350504.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X1
           [Solanum tuberosum] gi|565367720|ref|XP_006350505.1|
           PREDICTED: U1 small nuclear ribonucleoprotein A-like
           isoform X2 [Solanum tuberosum]
          Length = 231

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 28/34 (82%), Positives = 31/34 (91%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRGNH 102
           GYK +EH+RDS NLRLQFARRPGARSGGG+RG H
Sbjct: 198 GYKLDEHERDSPNLRLQFARRPGARSGGGYRGKH 231


>gb|AFY26894.1| RNA-binding protein with multiple splicing [Morella rubra]
          Length = 233

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GYKF+EHDRDS +LRLQFAR PGARSGGGHRG
Sbjct: 200 GYKFDEHDRDSVSLRLQFARYPGARSGGGHRG 231


>ref|XP_002515833.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223545062|gb|EEF46575.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 232

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/32 (87%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GYKF+EHDRDS +LRLQFAR PGARSGGGHRG
Sbjct: 199 GYKFDEHDRDSVHLRLQFARYPGARSGGGHRG 230


>gb|EOY23631.1| RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 233

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GYKF+EHDRDS  LRLQFAR PGARSGGGHRG
Sbjct: 200 GYKFDEHDRDSVKLRLQFARYPGARSGGGHRG 231


>ref|XP_004307948.1| PREDICTED: uncharacterized protein LOC101301247 [Fragaria vesca
           subsp. vesca]
          Length = 230

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GY F+EHDRDS NLRLQFAR PGARSGGGHRG
Sbjct: 197 GYTFDEHDRDSVNLRLQFARYPGARSGGGHRG 228


>ref|XP_006374094.1| hypothetical protein POPTR_0015s01130g [Populus trichocarpa]
           gi|550321717|gb|ERP51891.1| hypothetical protein
           POPTR_0015s01130g [Populus trichocarpa]
          Length = 233

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GY+F+EHDRDS +LRLQFAR PGARSGGGHRG
Sbjct: 200 GYRFDEHDRDSVDLRLQFARYPGARSGGGHRG 231


>ref|XP_002321981.1| hypothetical protein POPTR_0015s01130g [Populus trichocarpa]
           gi|222868977|gb|EEF06108.1| hypothetical protein
           POPTR_0015s01130g [Populus trichocarpa]
          Length = 220

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GY+F+EHDRDS +LRLQFAR PGARSGGGHRG
Sbjct: 187 GYRFDEHDRDSVDLRLQFARYPGARSGGGHRG 218


>ref|XP_006441170.1| hypothetical protein CICLE_v10022008mg [Citrus clementina]
           gi|567897366|ref|XP_006441171.1| hypothetical protein
           CICLE_v10022008mg [Citrus clementina]
           gi|568877915|ref|XP_006491963.1| PREDICTED: U1 small
           nuclear ribonucleoprotein A-like isoform X1 [Citrus
           sinensis] gi|557543432|gb|ESR54410.1| hypothetical
           protein CICLE_v10022008mg [Citrus clementina]
           gi|557543433|gb|ESR54411.1| hypothetical protein
           CICLE_v10022008mg [Citrus clementina]
          Length = 232

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 27/32 (84%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GY+F+EHDRDS  LRLQFAR PGARSGGGHRG
Sbjct: 199 GYRFDEHDRDSVKLRLQFARYPGARSGGGHRG 230


>gb|EXC21403.1| hypothetical protein L484_011845 [Morus notabilis]
          Length = 239

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GYKF+EHDRDS NLRLQFAR PGARSGGG RG
Sbjct: 206 GYKFDEHDRDSVNLRLQFARYPGARSGGGPRG 237


>ref|XP_004146235.1| PREDICTED: uncharacterized protein LOC101218789 [Cucumis sativus]
           gi|449529543|ref|XP_004171759.1| PREDICTED:
           uncharacterized protein LOC101224897 [Cucumis sativus]
          Length = 232

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 28/32 (87%), Positives = 29/32 (90%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GYKF+E DRDS NLRLQFAR PGARSGGGHRG
Sbjct: 199 GYKFDEFDRDSVNLRLQFARFPGARSGGGHRG 230


>ref|XP_002317797.1| hypothetical protein POPTR_0012s02630g [Populus trichocarpa]
           gi|222858470|gb|EEE96017.1| hypothetical protein
           POPTR_0012s02630g [Populus trichocarpa]
          Length = 233

 Score = 62.0 bits (149), Expect = 9e-08
 Identities = 27/32 (84%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GY+F+EHDRDS +LRLQFAR PGARSGGGHRG
Sbjct: 200 GYRFDEHDRDSFHLRLQFARYPGARSGGGHRG 231


>ref|XP_006360155.1| PREDICTED: U1 small nuclear ribonucleoprotein A-like isoform X1
           [Solanum tuberosum]
          Length = 237

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GYKF+EH+RDS +L+LQF+R PGARSGGGHRG
Sbjct: 204 GYKFDEHERDSVSLKLQFSRNPGARSGGGHRG 235


>ref|XP_004240963.1| PREDICTED: uncharacterized protein LOC101261033 isoform 2 [Solanum
           lycopersicum]
          Length = 238

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 25/32 (78%), Positives = 30/32 (93%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GYKF+EH+RDS +L+LQF+R PGARSGGGHRG
Sbjct: 205 GYKFDEHERDSVSLKLQFSRNPGARSGGGHRG 236


>ref|XP_004502691.1| PREDICTED: uncharacterized protein LOC101494600 isoform X1 [Cicer
           arietinum] gi|502136449|ref|XP_004502692.1| PREDICTED:
           uncharacterized protein LOC101494600 isoform X2 [Cicer
           arietinum]
          Length = 229

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GYKF+E DR+S NLR QFAR PGARSGGGHRG
Sbjct: 196 GYKFDELDRNSVNLRFQFARYPGARSGGGHRG 227


>ref|XP_006851878.1| hypothetical protein AMTR_s00041p00116460 [Amborella trichopoda]
           gi|548855461|gb|ERN13345.1| hypothetical protein
           AMTR_s00041p00116460 [Amborella trichopoda]
          Length = 249

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 27/32 (84%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GYK +EHDRDS NLRLQFAR PG RSGGG RG
Sbjct: 216 GYKLDEHDRDSPNLRLQFARYPGPRSGGGPRG 247


>gb|AEZ00900.1| putative RNA recognition motif-containing protein, partial [Elaeis
           guineensis]
          Length = 294

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +1

Query: 1   GYKFNEHDRDSANLRLQFARRPGARSGGGHRG 96
           GYKF+EHDR+SANLRLQFAR PG RS GG RG
Sbjct: 247 GYKFDEHDRESANLRLQFARFPGPRSSGGPRG 278


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