BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00028904
         (674 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...    99   1e-18
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595...    93   4e-17
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A...    88   3e-15
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A...    77   8e-14
ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253...    79   2e-12
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579...    77   4e-12
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A...    75   2e-11
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601...    69   1e-09
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605...    69   2e-09
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A...    61   3e-07
ref|XP_006344597.1| PREDICTED: uncharacterized protein LOC102605...    55   9e-07
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596...    59   2e-06
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A...    56   9e-06

>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 45/124 (36%), Positives = 76/124 (61%)
 Frame = +1

Query: 70   IQKLVKFRNPSIQIIPNRWGNLIQLIEGYKRWVKITRVTWYPPPRD*ILCNTYGTSKGKP 249
            ++K+VK + P I+ +   W  +IQ +  YKR + + RVTW PP    +  NT G  +G P
Sbjct: 661  VRKMVKSQFPWIKNMRWTWQAIIQRLNQYKRKIHVLRVTWKPPDDHYVKSNTDGACRGNP 720

Query: 250  GRKVYGFCVTNENGEIINVQGDEIGILTNTKVEIIVLLAAIKWCDHIKMDKIIFQTDSMM 429
            G   +GFC+ ++ G++I  +   IGI TN + E + +L A++ C + KM K+I +TDS+ 
Sbjct: 721  GLSSFGFCIRDDKGDLIYAKAKGIGIATNMEAETVAILTALRECSNRKMQKVIIETDSLS 780

Query: 430  VQRI 441
            +++I
Sbjct: 781  LKKI 784


>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
          Length = 866

 Score = 93.2 bits (230), Expect(2) = 4e-17
 Identities = 41/147 (27%), Positives = 77/147 (52%)
 Frame = +1

Query: 1    KKKCLQVWR*KSIGRCIF*MFATIQKLVKFRNPSIQIIPNRWGNLIQLIEGYKRWVKITR 180
            KKK  Q W   +  + ++ +   + +  +   PS++  P  W ++++ +E YK  +   +
Sbjct: 672  KKKYHQTWGNMTYNKLVYQVTLNVWQFARSSFPSMKQFPTNWSDMVKFLENYKPRIYYKK 731

Query: 181  VTWYPPPRD*ILCNTYGTSKGKPGRKVYGFCVTNENGEIINVQGDEIGILTNTKVEIIVL 360
            + W PP  +   CNT G SKG PG+  Y +C+ ++ G +I  Q +EI   TN + E + +
Sbjct: 732  IIWMPPNSNTRKCNTDGASKGNPGKSSYAYCLRDQEGNLIYAQAEEIPETTNVEAEAVAI 791

Query: 361  LAAIKWCDHIKMDKIIFQTDSMMVQRI 441
              AI  C      ++  +TDS++++ I
Sbjct: 792  KEAIYHCTTRGFSRVTIETDSLLLKNI 818



 Score = 21.2 bits (43), Expect(2) = 4e-17
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +3

Query: 441 LTDDWKPPWNILLSVK 488
           L  +W+ PWNI + V+
Sbjct: 819 LQGNWEIPWNIRIIVE 834


>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 198

 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 40/87 (45%), Positives = 58/87 (66%)
 Frame = +1

Query: 181 VTWYPPPRD*ILCNTYGTSKGKPGRKVYGFCVTNENGEIINVQGDEIGILTNTKVEIIVL 360
           V W  P  D I CNT G SKG PG   YG+C+ N NG++I+V  + IGI TN + E+  +
Sbjct: 17  VRWDAPHEDVIKCNTDGASKGNPGISAYGYCLRNSNGDLIHVTAENIGITTNVEAEMRAI 76

Query: 361 LAAIKWCDHIKMDKIIFQTDSMMVQRI 441
           L AI++C + KM KII ++DS+++ +I
Sbjct: 77  LEAIRYCVNKKMRKIILESDSLLMVKI 103


>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 1035

 Score = 76.6 bits (187), Expect(2) = 8e-14
 Identities = 35/124 (28%), Positives = 66/124 (53%)
 Frame = +1

Query: 70   IQKLVKFRNPSIQIIPNRWGNLIQLIEGYKRWVKITRVTWYPPPRD*ILCNTYGTSKGKP 249
            + +LV  + P I+ +   W  ++ +++ YK  +    V W  P    + CNT G SKG P
Sbjct: 632  LYQLVTIKFPWIKGLTYHWPQVVGMLQNYKPPLHYKVVRWRKPSEGWVTCNTDGASKGNP 691

Query: 250  GRKVYGFCVTNENGEIINVQGDEIGILTNTKVEIIVLLAAIKWCDHIKMDKIIFQTDSMM 429
                YG+C+ ++NG+++  +   IG  TN + E   +  A+++C    + K+  +TDS+ 
Sbjct: 692  RMSSYGYCIRDKNGDLLYAEAHNIGETTNMEAEATTVWKALQFCYENGLRKVRLETDSLA 751

Query: 430  VQRI 441
            +Q +
Sbjct: 752  LQNM 755



 Score = 26.6 bits (57), Expect(2) = 8e-14
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +2

Query: 2   RRNAYKYGDKNQLEGVYFRCLLL 70
           RRN+Y++G +     +Y++C L+
Sbjct: 609 RRNSYRHGKETTYNNMYYQCQLI 631


>ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253557 [Solanum
            lycopersicum]
          Length = 13995

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 2/138 (1%)
 Frame = +1

Query: 34   SIGRCIF*MFATIQKLVKFRNPSIQIIPNRWGNLIQLIEGYKRWVKITRVTWYPPPRD*I 213
            S  R IF + A    L+K R  S + +P  W  +++ +  Y    K+T+V W  P    I
Sbjct: 3122 SSSRLIFQIIAYSGLLIKTRRRSRKHVPYNWRIVVEALNNYNLKAKVTKVIWKAPDTGQI 3181

Query: 214  LCNTYGTSKGKPGRKVYGFCVTNENGEIINVQGDEIGIL--TNTKVEIIVLLAAIKWCDH 387
               T       P R  + FCV +E G+I+  Q  EIG L  TNT+ E + +L A+K+ + 
Sbjct: 3182 KIKT------DPRRSSWVFCVRDEQGDILQAQAQEIGELACTNTQAEAMAILQALKFIEA 3235

Query: 388  IKMDKIIFQTDSMMVQRI 441
             +MD+++ +TDS++   I
Sbjct: 3236 TQMDRVVIKTDSLLTNNI 3253


>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
          Length = 778

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 39/124 (31%), Positives = 60/124 (48%)
 Frame = +1

Query: 70  IQKLVKFRNPSIQIIPNRWGNLIQLIEGYKRWVKITRVTWYPPPRD*ILCNTYGTSKGKP 249
           I  L   R P ++ IP  W  +++  E Y   +    + W PP      CNT   SKG P
Sbjct: 92  IHNLAMVRYPWLRNIPKDWSMMVKFFENYISVLATKVIYWVPPNMGVYKCNTDCASKGNP 151

Query: 250 GRKVYGFCVTNENGEIINVQGDEIGILTNTKVEIIVLLAAIKWCDHIKMDKIIFQTDSMM 429
                GFC+ N NGE I     E+G  T+ + E+I     +++C    +  +I +TDS++
Sbjct: 152 RPSAGGFCIRNWNGEFIYTTSQELGFKTSLEAEVIAFERGLQFCMSHNLLPVILETDSLI 211

Query: 430 VQRI 441
           V +I
Sbjct: 212 VSKI 215


>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 143

 Score = 74.7 bits (182), Expect(2) = 2e-11
 Identities = 34/103 (33%), Positives = 56/103 (54%)
 Frame = +1

Query: 133 LIQLIEGYKRWVKITRVTWYPPPRD*ILCNTYGTSKGKPGRKVYGFCVTNENGEIINVQG 312
           ++ L++ YK  +    V W PP    I CNT G SKG P +  YGFC+ N  GE++  + 
Sbjct: 1   MVALLQSYKPTLYYHVVNWKPPEIGWIKCNTDGASKGNPDQSSYGFCIRNHTGELLYAEV 60

Query: 313 DEIGILTNTKVEIIVLLAAIKWCDHIKMDKIIFQTDSMMVQRI 441
             IG+ TN   E + +  A+++C      ++  +TDS+ ++ I
Sbjct: 61  QSIGVTTNMDAESMAIWKALQYCLSQGFQQVSLETDSLTLKNI 103



 Score = 20.8 bits (42), Expect(2) = 2e-11
 Identities = 6/18 (33%), Positives = 11/18 (61%)
 Frame = +3

Query: 441 LTDDWKPPWNILLSVKSL 494
           L  +WK PW ++  V+ +
Sbjct: 104 LVRNWKTPWELVERVEDI 121


>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
          Length = 2019

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 34/106 (32%), Positives = 52/106 (49%)
 Frame = +1

Query: 115  PNRWGNLIQLIEGYKRWVKITRVTWYPPPRD*ILCNTYGTSKGKPGRKVYGFCVTNENGE 294
            P RW     +IE   +  K+T V W  PP   +  NT G++   PG    G  + N  GE
Sbjct: 1046 PLRWNKFCNVIENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIGAGDVIRNHLGE 1105

Query: 295  IINVQGDEIGILTNTKVEIIVLLAAIKWCDHIKMDKIIFQTDSMMV 432
            II      +G  TN + E+   +  I WC H+K +++I + DS ++
Sbjct: 1106 IILAYSTPLGTGTNNQAEVEAAIFGIAWCIHMKYNQVILEVDSQLL 1151


>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
          Length = 333

 Score = 68.6 bits (166), Expect = 2e-09
 Identities = 41/147 (27%), Positives = 73/147 (49%)
 Frame = +1

Query: 1   KKKCLQVWR*KSIGRCIF*MFATIQKLVKFRNPSIQIIPNRWGNLIQLIEGYKRWVKITR 180
           ++  L+  R  S    ++ + + + KL +   P +Q  P +W +++  +E +K  +    
Sbjct: 98  RRNNLKHGRPSSYNNLVYRVNSDLWKLGRTIYPKLQDFPTKWSDIVACLEKHKPKLYYLP 157

Query: 181 VTWYPPPRD*ILCNTYGTSKGKPGRKVYGFCVTNENGEIINVQGDEIGILTNTKVEIIVL 360
           V W  PP   + CNT   S+  P    YGFC+ N  G+++ VQG EI   TN +VE + +
Sbjct: 158 VCW-KPPEGILTCNTDVASRCNPEISSYGFCLRNSVGDLVYVQGKEIQEGTNLEVEAVAI 216

Query: 361 LAAIKWCDHIKMDKIIFQTDSMMVQRI 441
              +  C    + K   +TDS ++ +I
Sbjct: 217 REDLAHCVTKGVMKACLETDSQVLIKI 243


>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 389

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 36/127 (28%), Positives = 62/127 (48%)
 Frame = +1

Query: 58  MFATIQKLVKFRNPSIQIIPNRWGNLIQLIEGYKRWVKITRVTWYPPPRD*ILCNTYGTS 237
           +F  I +++K   P+I    + W  L  L+E  ++ +K+T V W  PP      NT G++
Sbjct: 170 IFKDIMQIIKAVYPNIPW-QSSWERLFNLVEQCQQHLKVTMVNWERPPEGIHKLNTDGSA 228

Query: 238 KGKPGRKVYGFCVTNENGEIINVQGDEIGILTNTKVEIIVLLAAIKWCDHIKMDKIIFQT 417
           K   G+   G  + +  G++I      +G  TN   EI   L  ++WC     +KII + 
Sbjct: 229 KHNTGKIGGGGILRDHQGKLIYAFAIPLGFGTNNFAEIQAALHGLQWCQQHGFEKIILEV 288

Query: 418 DSMMVQR 438
           DS ++ +
Sbjct: 289 DSELLHK 295


>ref|XP_006344597.1| PREDICTED: uncharacterized protein LOC102605041 [Solanum tuberosum]
          Length = 220

 Score = 55.1 bits (131), Expect(2) = 9e-07
 Identities = 27/82 (32%), Positives = 40/82 (48%)
 Frame = +1

Query: 181 VTWYPPPRD*ILCNTYGTSKGKPGRKVYGFCVTNENGEIINVQGDEIGILTNTKVEIIVL 360
           V W PPP     CNT G S+G  G     FCV + +G+++  +G  I   TN   E + L
Sbjct: 76  VRWSPPPLGWWKCNTDGASRGNSGPSTIAFCVRDSSGDLVGAKGLRIQDTTNITAEAMAL 135

Query: 361 LAAIKWCDHIKMDKIIFQTDSM 426
               K+C       +I ++DS+
Sbjct: 136 KEGRKYCLENGFSLVIMESDSL 157



 Score = 24.3 bits (51), Expect(2) = 9e-07
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 441 LTDDWKPPWNILLSVKSLS 497
           L  DW  PW++ L V S++
Sbjct: 163 LNGDWIVPWSVTLEVNSIN 181


>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
          Length = 1135

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 27/82 (32%), Positives = 48/82 (58%)
 Frame = +1

Query: 196  PPRD*ILCNTYGTSKGKPGRKVYGFCVTNENGEIINVQGDEIGILTNTKVEIIVLLAAIK 375
            P R+ + CNT G ++G  G     F V +E G++I  +   IGI TN + E + LL A+ 
Sbjct: 1039 PGRNKVKCNTDGAARGNSGASSTSFVVRDEEGDLIYARAKGIGIATNMEAEALALLEAVW 1098

Query: 376  WCDHIKMDKIIFQTDSMMVQRI 441
            +C    + + I +TDS++++++
Sbjct: 1099 YCQEKDLKEPIIETDSLVLKKM 1120


>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 668

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 2/146 (1%)
 Frame = +1

Query: 1   KKKCLQVWR*KS--IGRCIF*MFATIQKLVKFRNPSIQIIPNRWGNLIQLIEGYKRWVKI 174
           K +C   +  KS  I R  + ++    K++K   P I   P  W  LIQ  E  K  +K+
Sbjct: 431 KNRCACKYGGKSTNISRVKYAIYKDTFKMLKSAFPCINW-PGNWAALIQTAERCKHEIKV 489

Query: 175 TRVTWYPPPRD*ILCNTYGTSKGKPGRKVYGFCVTNENGEIINVQGDEIGILTNTKVEII 354
              TW  PP   I  NT G++    G    G  + ++ G+I+      +G  TN K E  
Sbjct: 490 CMTTWNRPPEQWIKINTDGSALINTGHCGAGGIIRDKEGKIVLAFATPLGDGTNNKAEAE 549

Query: 355 VLLAAIKWCDHIKMDKIIFQTDSMMV 432
             L  + W   +    I+ + DS +V
Sbjct: 550 AALFGLSWALELGHRNILIELDSQLV 575