BLASTX nr result
ID: Atropa21_contig00028893
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00028893
(680 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006345891.1| PREDICTED: RNA-binding protein 42-like isofo... 65 3e-08
emb|CBI25267.3| unnamed protein product [Vitis vinifera] 65 3e-08
ref|XP_002272469.1| PREDICTED: CUGBP Elav-like family member 5 [... 65 3e-08
emb|CAN63219.1| hypothetical protein VITISV_033169 [Vitis vinifera] 65 3e-08
gb|ESW16010.1| hypothetical protein PHAVU_007G122100g [Phaseolus... 64 6e-08
gb|EOY10914.1| RNA-binding family protein [Theobroma cacao] 64 6e-08
ref|XP_003556455.1| PREDICTED: RNA-binding protein 42-like isofo... 64 6e-08
emb|CDK13061.1| putative predicted protein [Malus domestica] 63 7e-08
ref|XP_006345892.1| PREDICTED: RNA-binding protein 42-like isofo... 63 7e-08
ref|XP_006298367.1| hypothetical protein CARUB_v10014437mg, part... 63 7e-08
gb|EMJ06977.1| hypothetical protein PRUPE_ppa010477mg [Prunus pe... 63 7e-08
ref|XP_004239744.1| PREDICTED: RNA-binding protein 42-like isofo... 63 7e-08
ref|XP_002884448.1| hypothetical protein ARALYDRAFT_477706 [Arab... 63 7e-08
ref|XP_006659720.1| PREDICTED: RNA-binding protein 42-like [Oryz... 63 1e-07
ref|XP_004972724.1| PREDICTED: RNA-binding protein 42-like [Seta... 63 1e-07
ref|XP_004958216.1| PREDICTED: RNA-binding protein 42-like [Seta... 63 1e-07
ref|XP_003573237.1| PREDICTED: uncharacterized protein LOC100845... 63 1e-07
dbj|BAJ94672.1| predicted protein [Hordeum vulgare subsp. vulgare] 63 1e-07
ref|XP_002521977.1| rrm-containing protein, putative [Ricinus co... 63 1e-07
gb|ACG33680.1| hypothetical protein [Zea mays] 63 1e-07
>ref|XP_006345891.1| PREDICTED: RNA-binding protein 42-like isoform X1 [Solanum
tuberosum]
Length = 235
Score = 64.7 bits (156), Expect = 3e-08
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVRDKRTGKTKG+GFVSFSNPSDLV ALK MNGK
Sbjct: 158 VVRDKRTGKTKGYGFVSFSNPSDLVVALKEMNGK 191
Score = 60.5 bits (145), Expect = 5e-07
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = +1
Query: 586 ISGKYVGNRPVQLRKSKWKDRIDYEALVKQK 678
++GKYVGNRPVQL+KSKWKDRIDYEAL +QK
Sbjct: 188 MNGKYVGNRPVQLQKSKWKDRIDYEALTRQK 218
>emb|CBI25267.3| unnamed protein product [Vitis vinifera]
Length = 221
Score = 64.7 bits (156), Expect = 3e-08
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVRDKRTGKT+GFGFVSFSNPSDL AALK MNGK
Sbjct: 144 VVRDKRTGKTRGFGFVSFSNPSDLAAALKEMNGK 177
>ref|XP_002272469.1| PREDICTED: CUGBP Elav-like family member 5 [Vitis vinifera]
Length = 257
Score = 64.7 bits (156), Expect = 3e-08
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVRDKRTGKT+GFGFVSFSNPSDL AALK MNGK
Sbjct: 180 VVRDKRTGKTRGFGFVSFSNPSDLAAALKEMNGK 213
>emb|CAN63219.1| hypothetical protein VITISV_033169 [Vitis vinifera]
Length = 257
Score = 64.7 bits (156), Expect = 3e-08
Identities = 31/34 (91%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVRDKRTGKT+GFGFVSFSNPSDL AALK MNGK
Sbjct: 180 VVRDKRTGKTRGFGFVSFSNPSDLAAALKEMNGK 213
>gb|ESW16010.1| hypothetical protein PHAVU_007G122100g [Phaseolus vulgaris]
Length = 244
Score = 63.5 bits (153), Expect = 6e-08
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVRDKRTGKTKG+GFVSF+NPSDL AALK MNGK
Sbjct: 167 VVRDKRTGKTKGYGFVSFANPSDLAAALKEMNGK 200
>gb|EOY10914.1| RNA-binding family protein [Theobroma cacao]
Length = 246
Score = 63.5 bits (153), Expect = 6e-08
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVRDKRTGKTKG+GFVSF+NPSDL AALK MNGK
Sbjct: 169 VVRDKRTGKTKGYGFVSFANPSDLAAALKEMNGK 202
>ref|XP_003556455.1| PREDICTED: RNA-binding protein 42-like isoform X1 [Glycine max]
gi|571569759|ref|XP_006606449.1| PREDICTED: RNA-binding
protein 42-like isoform X2 [Glycine max]
Length = 247
Score = 63.5 bits (153), Expect = 6e-08
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVRDKRTGKTKG+GFVSF+NPSDL AALK MNGK
Sbjct: 170 VVRDKRTGKTKGYGFVSFANPSDLAAALKEMNGK 203
>emb|CDK13061.1| putative predicted protein [Malus domestica]
Length = 389
Score = 63.2 bits (152), Expect = 7e-08
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVRDKRTGKTKGFGFVSF+NPSDL ALK MNGK
Sbjct: 243 VVRDKRTGKTKGFGFVSFANPSDLAGALKEMNGK 276
>ref|XP_006345892.1| PREDICTED: RNA-binding protein 42-like isoform X2 [Solanum
tuberosum] gi|565358152|ref|XP_006345893.1| PREDICTED:
RNA-binding protein 42-like isoform X3 [Solanum
tuberosum]
Length = 213
Score = 63.2 bits (152), Expect = 7e-08
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVRDKRTGKTKG+GFVSFSNPSDLV ALK MNG+
Sbjct: 158 VVRDKRTGKTKGYGFVSFSNPSDLVVALKEMNGQ 191
>ref|XP_006298367.1| hypothetical protein CARUB_v10014437mg, partial [Capsella rubella]
gi|482567076|gb|EOA31265.1| hypothetical protein
CARUB_v10014437mg, partial [Capsella rubella]
Length = 258
Score = 63.2 bits (152), Expect = 7e-08
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
V+RDKRTGKTKG+GFVSFSNP+DL AALK MNGK
Sbjct: 181 VIRDKRTGKTKGYGFVSFSNPADLAAALKEMNGK 214
>gb|EMJ06977.1| hypothetical protein PRUPE_ppa010477mg [Prunus persica]
Length = 248
Score = 63.2 bits (152), Expect = 7e-08
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVRDKRTGKTKGFGFVSF+NPSDL ALK MNGK
Sbjct: 171 VVRDKRTGKTKGFGFVSFANPSDLAGALKEMNGK 204
>ref|XP_004239744.1| PREDICTED: RNA-binding protein 42-like isoform 1 [Solanum
lycopersicum]
Length = 228
Score = 63.2 bits (152), Expect = 7e-08
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVR+KRTGKTKG+GFVSFSNPSDLV ALK MNGK
Sbjct: 151 VVREKRTGKTKGYGFVSFSNPSDLVVALKEMNGK 184
Score = 62.0 bits (149), Expect = 2e-07
Identities = 27/31 (87%), Positives = 30/31 (96%)
Frame = +1
Query: 586 ISGKYVGNRPVQLRKSKWKDRIDYEALVKQK 678
++GKYVGNRPVQLRKSKWKDRIDYEAL +QK
Sbjct: 181 MNGKYVGNRPVQLRKSKWKDRIDYEALARQK 211
>ref|XP_002884448.1| hypothetical protein ARALYDRAFT_477706 [Arabidopsis lyrata subsp.
lyrata] gi|297330288|gb|EFH60707.1| hypothetical protein
ARALYDRAFT_477706 [Arabidopsis lyrata subsp. lyrata]
Length = 245
Score = 63.2 bits (152), Expect = 7e-08
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
V+RDKRTGKTKG+GFVSFSNP+DL AALK MNGK
Sbjct: 168 VIRDKRTGKTKGYGFVSFSNPADLAAALKEMNGK 201
>ref|XP_006659720.1| PREDICTED: RNA-binding protein 42-like [Oryza brachyantha]
Length = 240
Score = 62.8 bits (151), Expect = 1e-07
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVRDKRTGKTKG+GFVSFSNP+DL AA+K MNGK
Sbjct: 163 VVRDKRTGKTKGYGFVSFSNPTDLAAAIKEMNGK 196
>ref|XP_004972724.1| PREDICTED: RNA-binding protein 42-like [Setaria italica]
Length = 238
Score = 62.8 bits (151), Expect = 1e-07
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVRDKRTGKTKG+GFVSFSNP+DL AA+K MNGK
Sbjct: 161 VVRDKRTGKTKGYGFVSFSNPTDLAAAIKEMNGK 194
>ref|XP_004958216.1| PREDICTED: RNA-binding protein 42-like [Setaria italica]
Length = 238
Score = 62.8 bits (151), Expect = 1e-07
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVRDKRTGKTKG+GFVSFSNP+DL AA+K MNGK
Sbjct: 161 VVRDKRTGKTKGYGFVSFSNPTDLAAAIKEMNGK 194
>ref|XP_003573237.1| PREDICTED: uncharacterized protein LOC100845208 [Brachypodium
distachyon]
Length = 233
Score = 62.8 bits (151), Expect = 1e-07
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVRDKRTGKTKG+GFVSFSNP+DL AA+K MNGK
Sbjct: 156 VVRDKRTGKTKGYGFVSFSNPTDLAAAIKEMNGK 189
>dbj|BAJ94672.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 233
Score = 62.8 bits (151), Expect = 1e-07
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVRDKRTGKTKG+GFVSFSNP+DL AA+K MNGK
Sbjct: 156 VVRDKRTGKTKGYGFVSFSNPTDLAAAIKEMNGK 189
>ref|XP_002521977.1| rrm-containing protein, putative [Ricinus communis]
gi|223538781|gb|EEF40381.1| rrm-containing protein,
putative [Ricinus communis]
Length = 238
Score = 62.8 bits (151), Expect = 1e-07
Identities = 30/34 (88%), Positives = 31/34 (91%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVRDKRTGKTKG+GFVSF NPSDL AALK MNGK
Sbjct: 161 VVRDKRTGKTKGYGFVSFCNPSDLAAALKEMNGK 194
>gb|ACG33680.1| hypothetical protein [Zea mays]
Length = 237
Score = 62.8 bits (151), Expect = 1e-07
Identities = 29/34 (85%), Positives = 32/34 (94%)
Frame = +1
Query: 1 VVRDKRTGKTKGFGFVSFSNPSDLVAALK*MNGK 102
VVRDKRTGKTKG+GFVSFSNP+DL AA+K MNGK
Sbjct: 160 VVRDKRTGKTKGYGFVSFSNPTDLAAAIKEMNGK 193