BLASTX nr result
ID: Atropa21_contig00028845
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00028845
(1269 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004245444.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 82 4e-13
ref|XP_006343767.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 82 5e-13
ref|XP_006343765.1| PREDICTED: ubiquitin carboxyl-terminal hydro... 82 5e-13
gb|EPS65731.1| ubiquitin carboxyl-terminal hydrolase [Genlisea a... 65 5e-08
gb|EXB81894.1| Ubiquitin carboxyl-terminal hydrolase 10 [Morus n... 65 6e-08
ref|XP_006279113.1| hypothetical protein CARUB_v10012691mg [Caps... 63 3e-07
ref|XP_006286720.1| hypothetical protein CARUB_v10002928mg [Caps... 62 4e-07
gb|AAD03433.1| contains similarity to ubiquitin carboxyl-termina... 62 5e-07
ref|NP_192795.3| ubiquitin-specific protease 9 [Arabidopsis thal... 62 5e-07
emb|CAB40023.1| putative protein [Arabidopsis thaliana] gi|72677... 62 5e-07
ref|XP_002279130.2| PREDICTED: ubiquitin carboxyl-terminal hydro... 62 7e-07
gb|AAD03434.1| contains similarity to ubiquitin carboxyl-termina... 58 7e-06
ref|NP_567363.1| ubiquitin-specific protease 10 [Arabidopsis tha... 58 7e-06
emb|CAB40025.1| putative protein [Arabidopsis thaliana] gi|72677... 58 7e-06
>ref|XP_004245444.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like [Solanum
lycopersicum]
Length = 940
Score = 82.4 bits (202), Expect = 4e-13
Identities = 42/51 (82%), Positives = 46/51 (90%), Gaps = 3/51 (5%)
Frame = +1
Query: 349 MTIPDSTYMMENGSIELP---EEEARIIQELTTKAESNLRQGNHYYVISNR 492
MTIPDSTYMMENGSIELP EEEARIIQEL +KAESNL+QGN +YV+SNR
Sbjct: 1 MTIPDSTYMMENGSIELPCTSEEEARIIQELMSKAESNLKQGNLFYVVSNR 51
>ref|XP_006343767.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform X3
[Solanum tuberosum]
Length = 936
Score = 82.0 bits (201), Expect = 5e-13
Identities = 43/51 (84%), Positives = 45/51 (88%), Gaps = 3/51 (5%)
Frame = +1
Query: 349 MTIPDSTYMMENGSIELP---EEEARIIQELTTKAESNLRQGNHYYVISNR 492
M IPDSTYMMENGSIELP EEEARIIQEL +KAESNL+QGN YYVISNR
Sbjct: 1 MKIPDSTYMMENGSIELPCTPEEEARIIQELISKAESNLKQGNLYYVISNR 51
>ref|XP_006343765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like isoform X1
[Solanum tuberosum] gi|565353710|ref|XP_006343766.1|
PREDICTED: ubiquitin carboxyl-terminal hydrolase 10-like
isoform X2 [Solanum tuberosum]
Length = 940
Score = 82.0 bits (201), Expect = 5e-13
Identities = 43/51 (84%), Positives = 45/51 (88%), Gaps = 3/51 (5%)
Frame = +1
Query: 349 MTIPDSTYMMENGSIELP---EEEARIIQELTTKAESNLRQGNHYYVISNR 492
M IPDSTYMMENGSIELP EEEARIIQEL +KAESNL+QGN YYVISNR
Sbjct: 1 MKIPDSTYMMENGSIELPCTPEEEARIIQELISKAESNLKQGNLYYVISNR 51
>gb|EPS65731.1| ubiquitin carboxyl-terminal hydrolase [Genlisea aurea]
Length = 941
Score = 65.5 bits (158), Expect = 5e-08
Identities = 36/54 (66%), Positives = 43/54 (79%), Gaps = 6/54 (11%)
Frame = +1
Query: 349 MTIPDST---YMMENGSIELP---EEEARIIQELTTKAESNLRQGNHYYVISNR 492
MTI DS Y+MENGSIELP EEE+RI+Q LT KAESN+R+G+ YYVIS+R
Sbjct: 1 MTILDSAGYDYLMENGSIELPCKPEEESRIVQGLTQKAESNMREGDFYYVISSR 54
>gb|EXB81894.1| Ubiquitin carboxyl-terminal hydrolase 10 [Morus notabilis]
Length = 2077
Score = 65.1 bits (157), Expect = 6e-08
Identities = 32/54 (59%), Positives = 44/54 (81%), Gaps = 3/54 (5%)
Frame = +1
Query: 340 EWIMTIPDSTYMMENGSIELP---EEEARIIQELTTKAESNLRQGNHYYVISNR 492
E IMTIPDS +M++NG+ LP EEE RI++ELT ++E+NL++GN YYV+SNR
Sbjct: 1146 ESIMTIPDSGFMIDNGASCLPLPPEEEKRIVKELTDQSEANLKEGNLYYVVSNR 1199
>ref|XP_006279113.1| hypothetical protein CARUB_v10012691mg [Capsella rubella]
gi|482547629|gb|EOA12011.1| hypothetical protein
CARUB_v10012691mg [Capsella rubella]
Length = 357
Score = 62.8 bits (151), Expect = 3e-07
Identities = 31/51 (60%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Frame = +1
Query: 349 MTIPDSTYMMENGSIELP---EEEARIIQELTTKAESNLRQGNHYYVISNR 492
MTIP+S +M+ENG +LP EEE RI+ ELTT++ESNL +GN Y+VIS R
Sbjct: 1 MTIPNSDFMVENGVCDLPFTPEEEKRIVSELTTESESNLNEGNVYFVISKR 51
>ref|XP_006286720.1| hypothetical protein CARUB_v10002928mg [Capsella rubella]
gi|482555426|gb|EOA19618.1| hypothetical protein
CARUB_v10002928mg [Capsella rubella]
Length = 910
Score = 62.4 bits (150), Expect = 4e-07
Identities = 30/51 (58%), Positives = 41/51 (80%), Gaps = 3/51 (5%)
Frame = +1
Query: 349 MTIPDSTYMMENGSIELP---EEEARIIQELTTKAESNLRQGNHYYVISNR 492
MTIP+S +M+ENG +LP EEE RI+ ELTT++E+NL++GN Y+VIS R
Sbjct: 1 MTIPNSDFMVENGVCDLPLSPEEEKRIVSELTTESENNLKEGNVYFVISKR 51
>gb|AAD03433.1| contains similarity to ubiquitin carboxyl-terminal hydrolase family
2 (Pfam:PF00443, score=48.3, E=3.5e-13, N=2) and
(Pfam:PF00442, Score=40.0 E=5.2e-08, N=1) [Arabidopsis
thaliana]
Length = 1028
Score = 62.0 bits (149), Expect = 5e-07
Identities = 30/51 (58%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Frame = +1
Query: 349 MTIPDSTYMMENGSIELP---EEEARIIQELTTKAESNLRQGNHYYVISNR 492
MTIP+S +M+ENG +LP EEE RI+ ELT+++E NL+QGN Y+VIS R
Sbjct: 1 MTIPNSDFMLENGVCDLPFTPEEEKRIVSELTSESEDNLKQGNLYFVISKR 51
>ref|NP_192795.3| ubiquitin-specific protease 9 [Arabidopsis thaliana]
gi|166201359|sp|Q9ZSB5.2|UBP10_ARATH RecName:
Full=Ubiquitin carboxyl-terminal hydrolase 10; AltName:
Full=Deubiquitinating enzyme 10; Short=AtUBP10; AltName:
Full=Ubiquitin thioesterase 10; AltName:
Full=Ubiquitin-specific-processing protease 10
gi|332657500|gb|AEE82900.1| ubiquitin-specific protease
9 [Arabidopsis thaliana]
Length = 923
Score = 62.0 bits (149), Expect = 5e-07
Identities = 30/51 (58%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Frame = +1
Query: 349 MTIPDSTYMMENGSIELP---EEEARIIQELTTKAESNLRQGNHYYVISNR 492
MTIP+S +M+ENG +LP EEE RI+ ELT+++E NL+QGN Y+VIS R
Sbjct: 1 MTIPNSDFMLENGVCDLPFTPEEEKRIVSELTSESEDNLKQGNLYFVISKR 51
>emb|CAB40023.1| putative protein [Arabidopsis thaliana] gi|7267754|emb|CAB78180.1|
putative protein [Arabidopsis thaliana]
Length = 928
Score = 62.0 bits (149), Expect = 5e-07
Identities = 30/51 (58%), Positives = 40/51 (78%), Gaps = 3/51 (5%)
Frame = +1
Query: 349 MTIPDSTYMMENGSIELP---EEEARIIQELTTKAESNLRQGNHYYVISNR 492
MTIP+S +M+ENG +LP EEE RI+ ELT+++E NL+QGN Y+VIS R
Sbjct: 1 MTIPNSDFMLENGVCDLPFTPEEEKRIVSELTSESEDNLKQGNLYFVISKR 51
>ref|XP_002279130.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 9-like [Vitis
vinifera]
Length = 1013
Score = 61.6 bits (148), Expect = 7e-07
Identities = 31/63 (49%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
Frame = +1
Query: 313 FSLSDLLGIEWIMTIPDSTYMMENGSIELP---EEEARIIQELTTKAESNLRQGNHYYVI 483
F S + ++ IMTI DS +MMENG LP E+E +I+ +L K+ES+L++GN YYV+
Sbjct: 59 FKFSKIFRLKSIMTIADSGFMMENGGSCLPYTPEQEKQIVDDLMNKSESSLKEGNLYYVV 118
Query: 484 SNR 492
SNR
Sbjct: 119 SNR 121
>gb|AAD03434.1| contains similarity to ubiquitin carboxyl-terminal hydrolase family
2 (Pfam:PF00443, score=40.0, E=5.2e-08, N=1) and
(Pfam:PF00442, Score=37.9 E=5.3e-10, N=1) [Arabidopsis
thaliana]
Length = 887
Score = 58.2 bits (139), Expect = 7e-06
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 3/51 (5%)
Frame = +1
Query: 349 MTIPDSTYMMENGSIELP---EEEARIIQELTTKAESNLRQGNHYYVISNR 492
MTIP+S +M+ENG + P EEE RI+ EL T++E NL++GN Y+VIS R
Sbjct: 1 MTIPNSDFMIENGVCDFPTTPEEEKRIVSELITESEDNLKEGNLYFVISKR 51
>ref|NP_567363.1| ubiquitin-specific protease 10 [Arabidopsis thaliana]
gi|30681496|ref|NP_849356.1| ubiquitin-specific protease
10 [Arabidopsis thaliana]
gi|75249397|sp|Q93Y01.1|UBP9_ARATH RecName:
Full=Ubiquitin carboxyl-terminal hydrolase 9; AltName:
Full=Deubiquitinating enzyme 9; Short=AtUBP9; AltName:
Full=Ubiquitin thioesterase 9; AltName:
Full=Ubiquitin-specific-processing protease 9
gi|15450767|gb|AAK96655.1| putative protein [Arabidopsis
thaliana] gi|34098847|gb|AAQ56806.1| At4g10590
[Arabidopsis thaliana] gi|222423042|dbj|BAH19503.1|
AT4G10590 [Arabidopsis thaliana]
gi|332657501|gb|AEE82901.1| ubiquitin-specific protease
10 [Arabidopsis thaliana] gi|332657502|gb|AEE82902.1|
ubiquitin-specific protease 10 [Arabidopsis thaliana]
Length = 910
Score = 58.2 bits (139), Expect = 7e-06
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 3/51 (5%)
Frame = +1
Query: 349 MTIPDSTYMMENGSIELP---EEEARIIQELTTKAESNLRQGNHYYVISNR 492
MTIP+S +M+ENG + P EEE RI+ EL T++E NL++GN Y+VIS R
Sbjct: 1 MTIPNSDFMIENGVCDFPTTPEEEKRIVSELITESEDNLKEGNLYFVISKR 51
>emb|CAB40025.1| putative protein [Arabidopsis thaliana] gi|7267756|emb|CAB78182.1|
putative protein [Arabidopsis thaliana]
Length = 937
Score = 58.2 bits (139), Expect = 7e-06
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 3/51 (5%)
Frame = +1
Query: 349 MTIPDSTYMMENGSIELP---EEEARIIQELTTKAESNLRQGNHYYVISNR 492
MTIP+S +M+ENG + P EEE RI+ EL T++E NL++GN Y+VIS R
Sbjct: 1 MTIPNSDFMIENGVCDFPTTPEEEKRIVSELITESEDNLKEGNLYFVISKR 51