BLASTX nr result
ID: Atropa21_contig00028844
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00028844
(675 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006363897.1| PREDICTED: sister chromatid cohesion protein... 362 6e-98
ref|XP_006363896.1| PREDICTED: sister chromatid cohesion protein... 362 6e-98
ref|XP_004242292.1| PREDICTED: sister chromatid cohesion protein... 313 4e-83
ref|XP_002284482.2| PREDICTED: sister chromatid cohesion protein... 62 1e-07
emb|CBI19025.3| unnamed protein product [Vitis vinifera] 62 1e-07
>ref|XP_006363897.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
isoform X2 [Solanum tuberosum]
Length = 1447
Score = 362 bits (929), Expect = 6e-98
Identities = 188/253 (74%), Positives = 200/253 (79%), Gaps = 29/253 (11%)
Frame = +2
Query: 2 TKYQKCQDGMTRPGNSGGSKLEMQFCKKGPLLLSMVKENRGYSYSDKEEISEANQELTTR 181
T+YQK QDGM R GNSGGS LEMQ CKKGPL LSM+K+N GYSYSDK+EISEANQELTTR
Sbjct: 1145 TQYQKSQDGMKRSGNSGGSTLEMQLCKKGPLPLSMLKKNCGYSYSDKKEISEANQELTTR 1204
Query: 182 QRQKTSKPFSASASFELHKEFSIDDEDEDDAHGTTEVVIRTEQQPDCSRTLRSRPLSDQK 361
+RQKTSKPFSAS SFELHKEFS+DDE EDDAHGT E IRTE QP CSRTLR RPLSDQK
Sbjct: 1205 ERQKTSKPFSASVSFELHKEFSMDDEHEDDAHGTIEADIRTELQPYCSRTLRLRPLSDQK 1264
Query: 362 DENPRSLKEKDTISRCKTIMCETSKSTKDNSSDICISKGSKNNDEKLIRQHKELCSPEDK 541
+ENPRSLKE DTISRCKTIM E SKS K NSSDICISKGSKN+ EKLIR HKELC+PEDK
Sbjct: 1265 NENPRSLKENDTISRCKTIMREPSKSVKGNSSDICISKGSKNDAEKLIRHHKELCTPEDK 1324
Query: 542 CCSGSTEAFDSSNSSLK-----------------------------DSCGLQSLCRPKKN 634
C SGSTE FDSSN+SLK DSCGLQSLCRP+KN
Sbjct: 1325 CYSGSTEVFDSSNNSLKITCDSREAEVLSLDSEIWGTLSNHSLLDQDSCGLQSLCRPRKN 1384
Query: 635 IDMVGSVSQQEDD 673
IDM+GSVSQQEDD
Sbjct: 1385 IDMIGSVSQQEDD 1397
>ref|XP_006363896.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
isoform X1 [Solanum tuberosum]
Length = 1448
Score = 362 bits (929), Expect = 6e-98
Identities = 188/253 (74%), Positives = 200/253 (79%), Gaps = 29/253 (11%)
Frame = +2
Query: 2 TKYQKCQDGMTRPGNSGGSKLEMQFCKKGPLLLSMVKENRGYSYSDKEEISEANQELTTR 181
T+YQK QDGM R GNSGGS LEMQ CKKGPL LSM+K+N GYSYSDK+EISEANQELTTR
Sbjct: 1146 TQYQKSQDGMKRSGNSGGSTLEMQLCKKGPLPLSMLKKNCGYSYSDKKEISEANQELTTR 1205
Query: 182 QRQKTSKPFSASASFELHKEFSIDDEDEDDAHGTTEVVIRTEQQPDCSRTLRSRPLSDQK 361
+RQKTSKPFSAS SFELHKEFS+DDE EDDAHGT E IRTE QP CSRTLR RPLSDQK
Sbjct: 1206 ERQKTSKPFSASVSFELHKEFSMDDEHEDDAHGTIEADIRTELQPYCSRTLRLRPLSDQK 1265
Query: 362 DENPRSLKEKDTISRCKTIMCETSKSTKDNSSDICISKGSKNNDEKLIRQHKELCSPEDK 541
+ENPRSLKE DTISRCKTIM E SKS K NSSDICISKGSKN+ EKLIR HKELC+PEDK
Sbjct: 1266 NENPRSLKENDTISRCKTIMREPSKSVKGNSSDICISKGSKNDAEKLIRHHKELCTPEDK 1325
Query: 542 CCSGSTEAFDSSNSSLK-----------------------------DSCGLQSLCRPKKN 634
C SGSTE FDSSN+SLK DSCGLQSLCRP+KN
Sbjct: 1326 CYSGSTEVFDSSNNSLKITCDSREAEVLSLDSEIWGTLSNHSLLDQDSCGLQSLCRPRKN 1385
Query: 635 IDMVGSVSQQEDD 673
IDM+GSVSQQEDD
Sbjct: 1386 IDMIGSVSQQEDD 1398
>ref|XP_004242292.1| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
[Solanum lycopersicum]
Length = 1520
Score = 313 bits (801), Expect = 4e-83
Identities = 159/197 (80%), Positives = 168/197 (85%)
Frame = +2
Query: 2 TKYQKCQDGMTRPGNSGGSKLEMQFCKKGPLLLSMVKENRGYSYSDKEEISEANQELTTR 181
T+YQK QDGM R GNSGGS LEMQ KKGPL LSM+K+N GYSYSDKEEISEANQELTTR
Sbjct: 1145 TQYQKSQDGMKRSGNSGGSMLEMQLSKKGPLPLSMLKKNCGYSYSDKEEISEANQELTTR 1204
Query: 182 QRQKTSKPFSASASFELHKEFSIDDEDEDDAHGTTEVVIRTEQQPDCSRTLRSRPLSDQK 361
+RQKTSKPFSAS SFELHKEFS+DDE EDDAHG E I TEQQP CSRTLR RP SDQK
Sbjct: 1205 ERQKTSKPFSASVSFELHKEFSMDDEHEDDAHGAIEADITTEQQPHCSRTLRLRPSSDQK 1264
Query: 362 DENPRSLKEKDTISRCKTIMCETSKSTKDNSSDICISKGSKNNDEKLIRQHKELCSPEDK 541
+E RSLKE DTISRCKTIM + SKS K NSSDICISKGSKN+ EKLI QHKELCSPEDK
Sbjct: 1265 NEKSRSLKENDTISRCKTIMRKPSKSVKGNSSDICISKGSKNDAEKLINQHKELCSPEDK 1324
Query: 542 CCSGSTEAFDSSNSSLK 592
C SGSTE FDSSN+SLK
Sbjct: 1325 CYSGSTEVFDSSNNSLK 1341
>ref|XP_002284482.2| PREDICTED: sister chromatid cohesion protein PDS5 homolog A-like
[Vitis vinifera]
Length = 1305
Score = 62.4 bits (150), Expect = 1e-07
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Frame = +2
Query: 164 QELTTRQRQKTSKPFSASASFELHKEFSIDDEDEDDAHGTTEVVIRTEQQPDCSRTLRSR 343
QE++T R+K +A S LH E I++ + D +E + Q + R
Sbjct: 1108 QEISTGGRRKHPVSPTAHKSVGLHNECCINNGHKSDKGRKSEPSLGQGQLSSSCGSATMR 1167
Query: 344 PLSDQKDENPR-------SLKEKDTISRCKTIMCETSKSTKDNSSDICISKGSKNNDEKL 502
PL++ + + SLK T I + SKS++ D C S NN E L
Sbjct: 1168 PLTESQISTKKMVLPHAASLKANGTAKESSNITTKPSKSSRSKRKDPCSSVEIINNSEVL 1227
Query: 503 IRQHKELCSPEDKC-CSGSTEAFDSSNSSLK---DSCGLQSLCRPKKNIDMV--GSVSQ 661
I Q +L SP DKC S + + F+S N++ K D+ +++LC +N + + GS+S+
Sbjct: 1228 IGQRIKLWSPVDKCFYSVTVDGFNSQNNTHKVVYDNGAIEALCLASENWETISDGSLSK 1286
>emb|CBI19025.3| unnamed protein product [Vitis vinifera]
Length = 1450
Score = 62.4 bits (150), Expect = 1e-07
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Frame = +2
Query: 164 QELTTRQRQKTSKPFSASASFELHKEFSIDDEDEDDAHGTTEVVIRTEQQPDCSRTLRSR 343
QE++T R+K +A S LH E I++ + D +E + Q + R
Sbjct: 1176 QEISTGGRRKHPVSPTAHKSVGLHNECCINNGHKSDKGRKSEPSLGQGQLSSSCGSATMR 1235
Query: 344 PLSDQKDENPR-------SLKEKDTISRCKTIMCETSKSTKDNSSDICISKGSKNNDEKL 502
PL++ + + SLK T I + SKS++ D C S NN E L
Sbjct: 1236 PLTESQISTKKMVLPHAASLKANGTAKESSNITTKPSKSSRSKRKDPCSSVEIINNSEVL 1295
Query: 503 IRQHKELCSPEDKC-CSGSTEAFDSSNSSLK---DSCGLQSLCRPKKNIDMV--GSVSQ 661
I Q +L SP DKC S + + F+S N++ K D+ +++LC +N + + GS+S+
Sbjct: 1296 IGQRIKLWSPVDKCFYSVTVDGFNSQNNTHKVVYDNGAIEALCLASENWETISDGSLSK 1354