BLASTX nr result
ID: Atropa21_contig00028793
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00028793 (1106 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAQ72730.1| putative integrase [Petunia x hybrida] 146 7e-45 ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624... 138 1e-41 gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum ... 144 2e-41 gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum ... 144 2e-41 gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum] 144 2e-41 gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea bat... 138 6e-40 gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japoni... 138 1e-38 gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum... 135 2e-38 gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 133 3e-37 gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] 131 3e-37 gb|AAM94350.1| gag-pol polyprotein [Zea mays] 133 9e-37 gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japoni... 126 1e-35 gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 128 1e-35 gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 127 1e-35 ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662... 132 2e-35 gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] 130 3e-35 gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 121 5e-35 gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|... 121 5e-35 gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] 129 8e-35 dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 129 2e-34 >gb|AAQ72730.1| putative integrase [Petunia x hybrida] Length = 437 Score = 146 bits (368), Expect(2) = 7e-45 Identities = 74/175 (42%), Positives = 105/175 (60%), Gaps = 2/175 (1%) Frame = -1 Query: 1103 RTIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKP 924 +TIVSDRD+KF SHFW+SLW LGTKL+FST + +TD + E+VNRTL +LR + GK Sbjct: 100 QTIVSDRDTKFLSHFWRSLWGALGTKLLFSTSHHPQTDGQTEVVNRTLGALLRAMTRGKA 159 Query: 923 TSW--RTICL*LNFLIKSHISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAE 750 +W R + + H I MT FE Y FN ++VV+ + K R Sbjct: 160 GTWIDRLPMMEFAYNRTLHSMIGMTPFECVYGFNPLIPLDLTPLPREMVVNFEGKARAKA 219 Query: 749 MVRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANL 585 +V +HAK K N+ + KV ++N GR++V + D+VW+HF+K+R P +RK L Sbjct: 220 LVELHAKAKKNLEESYAKVAAKKNKGRKKVELKKGDYVWVHFRKERFPNLRKGKL 274 Score = 62.8 bits (151), Expect(2) = 7e-45 Identities = 50/141 (35%), Positives = 61/141 (43%), Gaps = 20/141 (14%) Frame = -2 Query: 550 EINDNAYKIDLPSKYTVHNVFNVSDL--------------------SSCVVGEPLDSRTN 431 +IN+NAY +DLPS+Y V N FNVSDL VV + SRT Sbjct: 287 KINNNAYVVDLPSEYQVSNTFNVSDLVPLNVGNEEVVNDDEEVVNDDEAVVNDASISRTK 346 Query: 430 PFQEGRDDITPRSSRPFTRS*AKELQALQDMFMK*GALEALVE*FTRVYNV*MIVWEGDE 251 QEG DD T +RPFTRS AK +QD + +VW+G E Sbjct: 347 SSQEGEDDKTQTPTRPFTRSQAK---LIQDTHLP-------------------LVWKGME 384 Query: 250 EEGKRVKATKSGWKCKMSEGP 188 E K K+ C M GP Sbjct: 385 EGPK--SDLKTVLWCAMDGGP 403 >ref|XP_006490837.1| PREDICTED: uncharacterized protein LOC102624555 [Citrus sinensis] Length = 821 Score = 138 bits (347), Expect(2) = 1e-41 Identities = 68/176 (38%), Positives = 102/176 (57%), Gaps = 2/176 (1%) Frame = -1 Query: 1103 RTIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKP 924 R+IVSDRD+KF SHFWK+LW LGTKL+FST C+ +TD + E+VNRTL T+LR +I Sbjct: 252 RSIVSDRDAKFLSHFWKTLWGKLGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRAIIQKNL 311 Query: 923 TSWRTICL*LNFLIKS--HISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAE 750 +W + F H + + FE+ Y FN D S+D K++ Sbjct: 312 KTWEECLPHVEFAYNRTVHSATKFSPFEIVYGFNPLTPLDLLPLPIDERASMDGKKKAEF 371 Query: 749 MVRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANLV 582 + ++H + + +I K + + N GR++V FQ DWVW+H +K+R P R++ L+ Sbjct: 372 VKQLHERTRQHIEKRTEQYATQANKGRKQVVFQPGDWVWVHMRKERFPAQRRSKLL 427 Score = 59.7 bits (143), Expect(2) = 1e-41 Identities = 31/47 (65%), Positives = 35/47 (74%) Frame = -2 Query: 547 INDNAYKIDLPSKYTVHNVFNVSDLSSCVVGEPLDSRTNPFQEGRDD 407 INDNAYK+DLP +Y V FNVSDLS VGE DSRTNPF+E +D Sbjct: 440 INDNAYKLDLPGEYNVIATFNVSDLSPFDVGE--DSRTNPFEERGND 484 >gb|AAW28578.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1588 Score = 144 bits (363), Expect(2) = 2e-41 Identities = 77/175 (44%), Positives = 102/175 (58%), Gaps = 2/175 (1%) Frame = -1 Query: 1103 RTIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKP 924 RTIVSDRD+KF SHFW+ LW LGTKL+FST C+ +TD + E+VNRTL MLR ++ GK Sbjct: 1279 RTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKL 1338 Query: 923 TSWRTICL*LNFLIKS--HISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAE 750 TSW + F H S T FEV Y FN ++ +LD K++ Sbjct: 1339 TSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKKADM 1398 Query: 749 MVRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANL 585 M +IH + + I K N +V R+N GR+ V F+ D VW+H +K+R P RK L Sbjct: 1399 MKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHMRKERFPSKRKTKL 1453 Score = 53.1 bits (126), Expect(2) = 2e-41 Identities = 37/91 (40%), Positives = 43/91 (47%), Gaps = 18/91 (19%) Frame = -2 Query: 547 INDNAYKIDLPSKYTVHNVFNVSDLSSCVVGEPLDSRTNPFQE--------------GRD 410 I DNAYK+DLP ++ V FNVSDLS LDSRTN QE +D Sbjct: 1467 IGDNAYKLDLPGEFQVSATFNVSDLSH--YDADLDSRTNSLQEEGNDSIQGSSTPLKDKD 1524 Query: 409 DITPRSSRPFTRS*AKE----LQALQDMFMK 329 D RP TRS KE L LQ + + Sbjct: 1525 DALETPRRPITRSQTKEFNDKLNGLQSLIQR 1555 >gb|AAW28577.1| Putative gag-pol polyprotein, identical [Solanum demissum] Length = 1588 Score = 144 bits (363), Expect(2) = 2e-41 Identities = 77/175 (44%), Positives = 102/175 (58%), Gaps = 2/175 (1%) Frame = -1 Query: 1103 RTIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKP 924 RTIVSDRD+KF SHFW+ LW LGTKL+FST C+ +TD + E+VNRTL MLR ++ GK Sbjct: 1279 RTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKL 1338 Query: 923 TSWRTICL*LNFLIKS--HISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAE 750 TSW + F H S T FEV Y FN ++ +LD K++ Sbjct: 1339 TSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKKADM 1398 Query: 749 MVRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANL 585 M +IH + + I K N +V R+N GR+ V F+ D VW+H +K+R P RK L Sbjct: 1399 MKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHMRKERFPSKRKTKL 1453 Score = 53.1 bits (126), Expect(2) = 2e-41 Identities = 37/91 (40%), Positives = 43/91 (47%), Gaps = 18/91 (19%) Frame = -2 Query: 547 INDNAYKIDLPSKYTVHNVFNVSDLSSCVVGEPLDSRTNPFQE--------------GRD 410 I DNAYK+DLP ++ V FNVSDLS LDSRTN QE +D Sbjct: 1467 IGDNAYKLDLPGEFQVSATFNVSDLSH--YDADLDSRTNSLQEEGNDSIQGSSTPLKDKD 1524 Query: 409 DITPRSSRPFTRS*AKE----LQALQDMFMK 329 D RP TRS KE L LQ + + Sbjct: 1525 DALETPRRPITRSQTKEFNDKLNGLQSLIQR 1555 >gb|AAW28576.2| Gag-pol polyprotein, putative [Solanum demissum] Length = 1096 Score = 144 bits (363), Expect(2) = 2e-41 Identities = 77/175 (44%), Positives = 102/175 (58%), Gaps = 2/175 (1%) Frame = -1 Query: 1103 RTIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKP 924 RTIVSDRD+KF SHFW+ LW LGTKL+FST C+ +TD + E+VNRTL MLR ++ GK Sbjct: 787 RTIVSDRDAKFLSHFWRILWGKLGTKLLFSTSCHPQTDGQTEVVNRTLGNMLRAILKGKL 846 Query: 923 TSWRTICL*LNFLIKS--HISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAE 750 TSW + F H S T FEV Y FN ++ +LD K++ Sbjct: 847 TSWEDYLPIVEFAYNRTFHSSTGKTPFEVVYGFNPLTPLDLLPLPTNDFANLDGKKKADM 906 Query: 749 MVRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANL 585 M +IH + + I K N +V R+N GR+ V F+ D VW+H +K+R P RK L Sbjct: 907 MKKIHEQTRLAIEKKNKEVALRRNKGRKYVIFKPGDLVWVHMRKERFPSKRKTKL 961 Score = 53.1 bits (126), Expect(2) = 2e-41 Identities = 37/91 (40%), Positives = 43/91 (47%), Gaps = 18/91 (19%) Frame = -2 Query: 547 INDNAYKIDLPSKYTVHNVFNVSDLSSCVVGEPLDSRTNPFQE--------------GRD 410 I DNAYK+DLP ++ V FNVSDLS LDSRTN QE +D Sbjct: 975 IGDNAYKLDLPGEFQVSATFNVSDLSH--YDADLDSRTNSLQEEGNDSIQGSSTPLKDKD 1032 Query: 409 DITPRSSRPFTRS*AKE----LQALQDMFMK 329 D RP TRS KE L LQ + + Sbjct: 1033 DALETPRRPITRSQTKEFNDKLNGLQSLIQR 1063 >gb|AAV88076.1| putative retrotransposon polyprotein [Ipomoea batatas] Length = 1358 Score = 138 bits (348), Expect(2) = 6e-40 Identities = 72/176 (40%), Positives = 101/176 (57%), Gaps = 2/176 (1%) Frame = -1 Query: 1103 RTIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKP 924 RTIVSDRD+KF SHFW+ LW LGTKL++ST C+ +TD + E+VNRTL +LR VI Sbjct: 1049 RTIVSDRDAKFLSHFWRILWGKLGTKLLYSTACHPQTDGQTEVVNRTLTQLLRVVIRKNL 1108 Query: 923 TSWRTICL*LNFLIKS--HISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAE 750 SW + F H + +M+ FEV Y FN + +DA ++ Sbjct: 1109 KSWEESLPYVEFAYNRAIHSTTNMSPFEVAYGFNPLTPLDLIPLHVNDKECVDAAKKAQG 1168 Query: 749 MVRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANLV 582 + H+KV+A I K N + ++ N GR+ + F+ DWVWIH+ K R P RK+ L+ Sbjct: 1169 IREFHSKVRAQIEKKNEQYAQKANKGRKAIIFKPGDWVWIHYSKNRFPNQRKSKLM 1224 Score = 53.9 bits (128), Expect(2) = 6e-40 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 9/82 (10%) Frame = -2 Query: 547 INDNAYKIDLPSKYTVHNVFNVSDLSSCVVGEPLDSRTNPFQEGRDDITPR--------- 395 INDNAYK+DL +++V + FNV+DL+ + DS TN FQEG DD T Sbjct: 1237 INDNAYKLDLRGEHSVSSTFNVADLAPF---DFSDSGTNLFQEGEDDETGMQQINDPLKV 1293 Query: 394 SSRPFTRS*AKELQALQDMFMK 329 SS P TRS ++++Q + F++ Sbjct: 1294 SSGPVTRSKSRKIQEAFNTFVQ 1315 >gb|AAQ56338.1| putative gag-pol polyprotein [Oryza sativa Japonica Group] Length = 1619 Score = 138 bits (348), Expect(2) = 1e-38 Identities = 72/175 (41%), Positives = 101/175 (57%), Gaps = 2/175 (1%) Frame = -1 Query: 1100 TIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKPT 921 TIVSDRD+KF SHFW++LW LGTKL+FST C+ +TD +IE+VNRTL TMLR V+ Sbjct: 1306 TIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQIEVVNRTLSTMLRAVLKKNIK 1365 Query: 920 SWRTICL*LNFLIKS--HISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAEM 747 W + F H + M F++ Y S ++ DAKQR M Sbjct: 1366 MWEECLPHIEFACNRSLHSTTKMCPFQIVYSLLPRAPIDLMPLPSSEKLNFDAKQRAELM 1425 Query: 746 VRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANLV 582 +++H K NI +MN K + GR+ +NF+ D VW+H +K+R P +RK+ L+ Sbjct: 1426 LKLHETTKENIERMNAKYKFAGDKGRRELNFEPGDLVWLHLRKERFPDLRKSKLM 1480 Score = 49.7 bits (117), Expect(2) = 1e-38 Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%) Frame = -2 Query: 550 EINDNAYKIDLPSKYTVHNVFNVSDLSSCVVGE-PLDSRTNPFQEGRDD 407 +IN+NAYKIDLP+ + V FNV+DL + E L+SRT QEG DD Sbjct: 1492 KINENAYKIDLPADFGVSPTFNVADLKPYLGEEDELESRTTQMQEGEDD 1540 >gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp. aegilopoides] Length = 1704 Score = 135 bits (339), Expect(2) = 2e-38 Identities = 75/190 (39%), Positives = 102/190 (53%), Gaps = 5/190 (2%) Frame = -1 Query: 1100 TIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKPT 921 TIVSDRD+KF SHFW+ LW LG KL+FST C+ +TD + E+VNRTL TMLR V+ Sbjct: 1371 TIVSDRDTKFLSHFWRCLWAKLGNKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKNNKK 1430 Query: 920 SWRTICL*LNFLIKS--HISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAEM 747 W + F H + M FE+ Y F S V+ DAK+R + Sbjct: 1431 MWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPLPSSEKVNFDAKERSELI 1490 Query: 746 VRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANLV---QG 576 ++IH K NI +MN K ++ GR+ V F D VW+H +K R P +RK+ L+ G Sbjct: 1491 LKIHELTKENIERMNAKYKLARDKGRKHVVFAPGDLVWLHLRKDRFPNLRKSKLMPRADG 1550 Query: 575 EMSHLKSLRD 546 L+ + D Sbjct: 1551 PFKVLEKIND 1560 Score = 52.4 bits (124), Expect(2) = 2e-38 Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 12/77 (15%) Frame = -2 Query: 550 EINDNAYKIDLPSKYTVHNVFNVSDLSSCVVGE-PLDSRTNPFQEGRDD------ITPRS 392 +INDNAYK++LP+ + V FN++DL + E L SRT FQEG DD +TP + Sbjct: 1557 KINDNAYKLELPADFGVSPTFNIADLKPYLGEEDELPSRTTSFQEGEDDEDINTIVTPTA 1616 Query: 391 -----SRPFTRS*AKEL 356 + P TR+ A++L Sbjct: 1617 PTVTYTGPITRARARQL 1633 >gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group] gi|31431012|gb|AAP52850.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 2447 Score = 133 bits (335), Expect(2) = 3e-37 Identities = 70/175 (40%), Positives = 99/175 (56%), Gaps = 2/175 (1%) Frame = -1 Query: 1100 TIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKPT 921 TIVSDRD+KF SHFW++LW LGTKL+FST C+ +TD + E+VNRTL TMLR V+ Sbjct: 1327 TIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIK 1386 Query: 920 SWRTICL*LNFLIKS--HISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAEM 747 W + F H + M F++ Y S ++ DAKQR M Sbjct: 1387 MWEECLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDAKQRAELM 1446 Query: 746 VRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANLV 582 +++H K NI +MN K + GR+ + F+ D VW+H +K+R P +RK+ L+ Sbjct: 1447 LKLHETTKENIERMNAKYKFAGDKGRRELTFEPGDLVWLHLRKERFPDLRKSKLM 1501 Score = 49.7 bits (117), Expect(2) = 3e-37 Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%) Frame = -2 Query: 550 EINDNAYKIDLPSKYTVHNVFNVSDLSSCVVGE-PLDSRTNPFQEGRDD 407 +IN+NAYKIDLP+ + V FNV+DL + E L+SRT QEG DD Sbjct: 1513 KINENAYKIDLPADFGVSPTFNVADLKPYLGEEDELESRTTQMQEGEDD 1561 Score = 64.3 bits (155), Expect = 8e-08 Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 3/161 (1%) Frame = -1 Query: 1103 RTIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKP 924 + IVSDR+S+F SHFWK L LGT+L FST + +TD + E +N+ LE ML + Sbjct: 2148 KKIVSDRESQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLHACVLDFG 2207 Query: 923 TSWRTICL*LNFLIKS--HISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLD-AKQRKA 753 +W F + SI M +E Y V D ++ +A Sbjct: 2208 KTWDKSLPYAEFSYNNSYQASIQMAPYEALYGRKCRTPLLWDQVGESQVFGTDILREAEA 2267 Query: 752 EMVRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWI 630 ++ I +K + + D R R+ + F DD+V++ Sbjct: 2268 KVRTIWDNLKVAQSRQKSYADNR----RRNLEFAVDDFVYL 2304 >gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana] Length = 1887 Score = 131 bits (329), Expect(2) = 3e-37 Identities = 76/192 (39%), Positives = 108/192 (56%), Gaps = 6/192 (3%) Frame = -1 Query: 1103 RTIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKP 924 +TIVSDRD+KF S+FWK+LW+ LGTKL+FST C+ +TD + E+VNRTL T+LR +I Sbjct: 1517 KTIVSDRDTKFLSYFWKTLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLSTLLRALIKKNL 1576 Query: 923 TSWRTICL*LNFLI--KSHISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAE 750 +W + F H + + F++ Y FN VSLD K +KAE Sbjct: 1577 KTWEDCLPHVEFAYNHSMHSASKFSPFQIVYGFNPTTPLDLMPLPLSERVSLDGK-KKAE 1635 Query: 749 MV-RIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANL---V 582 +V +IH + K NI + + K N R+ V F D VWIH +K+R P+ RK+ L + Sbjct: 1636 LVQQIHEQAKKNIEEKTKQYAKHANKSRKEVIFNEGDLVWIHLRKERFPKERKSKLMSRI 1695 Query: 581 QGEMSHLKSLRD 546 G LK + + Sbjct: 1696 DGPFKVLKRINN 1707 Score = 52.0 bits (123), Expect(2) = 3e-37 Identities = 25/48 (52%), Positives = 32/48 (66%) Frame = -2 Query: 547 INDNAYKIDLPSKYTVHNVFNVSDLSSCVVGEPLDSRTNPFQEGRDDI 404 IN+NAY +DL KY V N FNV+DL + + D R+NPFQ G DD+ Sbjct: 1705 INNNAYSLDLQGKYNVSNSFNVADLFP-FIADNTDLRSNPFQLGEDDV 1751 >gb|AAM94350.1| gag-pol polyprotein [Zea mays] Length = 1618 Score = 133 bits (335), Expect(2) = 9e-37 Identities = 71/190 (37%), Positives = 105/190 (55%), Gaps = 5/190 (2%) Frame = -1 Query: 1100 TIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKPT 921 TIVSDRD+KF SHFW++LW LGTKL+FST C+ +TD + E+VNRTL TMLR V+ Sbjct: 1330 TIVSDRDAKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIK 1389 Query: 920 SWRTICL*LNFLIKS--HISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAEM 747 W + F H + M F++ Y S ++ DA +R M Sbjct: 1390 MWEDCLPHIEFAYNRSLHSTTKMCPFQIVYGLLPRAPIDLMPLPSSEKLNFDATRRAELM 1449 Query: 746 VRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANLV---QG 576 +++H K NI +MN + + GR+ +NF+ D VW+H +K+R P++RK+ L+ G Sbjct: 1450 LKLHETTKENIERMNARYKFASDKGRKEINFEPGDLVWLHLRKERFPELRKSKLLPRADG 1509 Query: 575 EMSHLKSLRD 546 L+ + D Sbjct: 1510 PFKVLEKIND 1519 Score = 48.1 bits (113), Expect(2) = 9e-37 Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 12/77 (15%) Frame = -2 Query: 550 EINDNAYKIDLPSKYTVHNVFNVSDLSSCVVGE-PLDSRTNPFQEGRDD----------- 407 +INDNAY++DLP+ + V FN++DL + E L+SRT QEG +D Sbjct: 1516 KINDNAYRLDLPADFGVSPTFNIADLKPYLGEEVELESRTTQMQEGENDEDIHTTDASIP 1575 Query: 406 ITPRSSRPFTRS*AKEL 356 I S P TR+ A++L Sbjct: 1576 IQVPISGPITRARARQL 1592 >gb|AAQ56407.1| putative gag-pol polyprotein [Oryza sativa Japonica Group] Length = 1619 Score = 126 bits (317), Expect(2) = 1e-35 Identities = 71/190 (37%), Positives = 100/190 (52%), Gaps = 5/190 (2%) Frame = -1 Query: 1100 TIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKPT 921 TIVSDRD+KF SHFW++LW LGTKL+FST C+ +TD + E+VNRT+ TMLR V+ Sbjct: 1251 TIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTVSTMLRAVLKKNIK 1310 Query: 920 SWRTICL*LNFLI--KSHISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAEM 747 W + F H + FE+ Y + V+ DAK R M Sbjct: 1311 MWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTLERVNFDAKYRAELM 1370 Query: 746 VRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANL---VQG 576 +++H K NI +MN K + G++ V F+ D VW+H +K R P +RK+ L G Sbjct: 1371 LKLHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLPPRADG 1430 Query: 575 EMSHLKSLRD 546 L+ + D Sbjct: 1431 PFQVLQKIND 1440 Score = 51.6 bits (122), Expect(2) = 1e-35 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 10/75 (13%) Frame = -2 Query: 550 EINDNAYKIDLPSKYTVHNVFNVSDLSSCVVGE-PLDSRTNPFQEGRDD--------ITP 398 +INDNAYK++LP+ + V FN++DL + E L+SRT QEG DD TP Sbjct: 1437 KINDNAYKLELPADFGVSPTFNIADLKPYLGEEDELESRTTQMQEGEDDEDIPSNDTTTP 1496 Query: 397 RSSR-PFTRS*AKEL 356 + + P TR+ A+EL Sbjct: 1497 IAQQGPMTRARAREL 1511 >gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group] gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1616 Score = 128 bits (321), Expect(2) = 1e-35 Identities = 71/190 (37%), Positives = 100/190 (52%), Gaps = 5/190 (2%) Frame = -1 Query: 1100 TIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKPT 921 TIVSDRD+KF SHFW++LW LGTK +FST C+ +TD + E+VNRTL TMLR V+ Sbjct: 1355 TIVSDRDTKFLSHFWRTLWAKLGTKFLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIK 1414 Query: 920 SWRTICL*LNFLI--KSHISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAEM 747 W + F H + FE+ Y + V+ DAK R M Sbjct: 1415 MWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPHPTSERVNFDAKYRAELM 1474 Query: 746 VRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANLV---QG 576 +++H K NI +MN K + G++ V F+ D VW+H +K R P +RK+ L+ G Sbjct: 1475 LKLHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLPRADG 1534 Query: 575 EMSHLKSLRD 546 L+ + D Sbjct: 1535 PFKVLQKIND 1544 Score = 50.1 bits (118), Expect(2) = 1e-35 Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 10/75 (13%) Frame = -2 Query: 550 EINDNAYKIDLPSKYTVHNVFNVSDLSSCVVGE-PLDSRTNPFQEGRDD--------ITP 398 +INDNAYK++LP+ + V FN++DL + E L+SRT QEG DD TP Sbjct: 1541 KINDNAYKLELPADFGVSPTFNIADLKPYLGEEDELESRTTQMQEGEDDEDIPSNDTSTP 1600 Query: 397 RSSR-PFTRS*AKEL 356 + + P TR+ A EL Sbjct: 1601 IAQQGPMTRARAHEL 1615 >gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group] gi|15217296|gb|AAK92640.1|AC079634_1 Putative retroelement [Oryza sativa Japonica Group] gi|31431373|gb|AAP53161.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group] Length = 1708 Score = 127 bits (320), Expect(2) = 1e-35 Identities = 71/190 (37%), Positives = 100/190 (52%), Gaps = 5/190 (2%) Frame = -1 Query: 1100 TIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKPT 921 TIVSDRD+KF SHFW++LW LGTKL+FST C+ +TD + E+VNRTL TMLR V+ Sbjct: 1355 TIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIK 1414 Query: 920 SWRTICL*LNFLI--KSHISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAEM 747 W + F H + FE+ Y + V+ DAK M Sbjct: 1415 MWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYHAELM 1474 Query: 746 VRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANLV---QG 576 +++H K NI +MN K + G++ V F+ D VW+H +K R P +RK+ L+ G Sbjct: 1475 LKLHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLPRADG 1534 Query: 575 EMSHLKSLRD 546 L+ + D Sbjct: 1535 PFKVLQKIND 1544 Score = 50.1 bits (118), Expect(2) = 1e-35 Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 10/75 (13%) Frame = -2 Query: 550 EINDNAYKIDLPSKYTVHNVFNVSDLSSCVVGE-PLDSRTNPFQEGRDD--------ITP 398 +INDN YK++LP+ + V FN++DL + E L+SRT QEG DD TP Sbjct: 1541 KINDNTYKLELPADFGVSPTFNIADLKPYLGEEDELESRTTQMQEGEDDEDIPSNDTTTP 1600 Query: 397 RSSR-PFTRS*AKEL 356 + + P TR+ A+EL Sbjct: 1601 IAQQGPMTRARAREL 1615 >ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max] Length = 612 Score = 132 bits (332), Expect(2) = 2e-35 Identities = 69/176 (39%), Positives = 102/176 (57%), Gaps = 3/176 (1%) Frame = -1 Query: 1103 RTIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKP 924 R+IVSDRD+KF SHFW++LW +GTKL+FST C+ +TD + E+VN+TL T+LR V+ Sbjct: 382 RSIVSDRDAKFLSHFWRTLWGKIGTKLLFSTTCHPQTDGQTEVVNKTLGTLLRTVLKKNL 441 Query: 923 TSWRTICL*LNFLIKS--HISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAE 750 SW + F H + + + FE+ Y FN + + Q KAE Sbjct: 442 KSWEACLPHVEFAYNRTVHSTTNCSPFEIVYGFNPLTPLDLLPMPNITMFKHKDAQAKAE 501 Query: 749 MV-RIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANL 585 V ++H +VKA I K N ++ N R++V + DWVW+H +K+R P+ RK+ L Sbjct: 502 YVKKLHEQVKAQIEKKNASYARQANKSRKKVVLEPGDWVWVHLKKERFPEHRKSKL 557 Score = 44.7 bits (104), Expect(2) = 2e-35 Identities = 20/27 (74%), Positives = 23/27 (85%) Frame = -2 Query: 550 EINDNAYKIDLPSKYTVHNVFNVSDLS 470 +INDNAYKIDLP++Y V FNVSDLS Sbjct: 570 KINDNAYKIDLPNEYNVSATFNVSDLS 596 >gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare] Length = 1720 Score = 130 bits (326), Expect(2) = 3e-35 Identities = 70/175 (40%), Positives = 97/175 (55%), Gaps = 2/175 (1%) Frame = -1 Query: 1100 TIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKPT 921 TIVSDRD+KF SHFW+ LW LGTKL+FST C+ +TD + E+VNR+L TMLR V+ Sbjct: 1386 TIVSDRDAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKNNIK 1445 Query: 920 SWRTICL*LNFLIKS--HISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAEM 747 W + F H + M FE+ Y F S V+ DAK+R + Sbjct: 1446 LWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELI 1505 Query: 746 VRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANLV 582 +++H K NI +MN + + GR+ V F D VW+H +K R P +RK+ L+ Sbjct: 1506 LKMHELTKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLM 1560 Score = 46.6 bits (109), Expect(2) = 3e-35 Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 12/77 (15%) Frame = -2 Query: 550 EINDNAYKIDLPSKYTVHNVFNVSDLSSCVVGE-PLDSRTNPFQEGRDD------ITPRS 392 +INDNAY+++LP+ + V FN++DL + E L SRT QEG DD TP + Sbjct: 1572 KINDNAYRLELPADFGVSPTFNIADLKPYLGEEDELPSRTTSVQEGEDDEDINTIATPTA 1631 Query: 391 -----SRPFTRS*AKEL 356 + P TR+ A++L Sbjct: 1632 PAAIHTGPVTRARARQL 1648 >gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] Length = 1713 Score = 121 bits (303), Expect(2) = 5e-35 Identities = 66/176 (37%), Positives = 94/176 (53%), Gaps = 2/176 (1%) Frame = -1 Query: 1103 RTIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKP 924 +TIVSDRD+KF S+FWK+LW LGT+L+FST C+ +TD + E+VNRTL +LR +I Sbjct: 1329 KTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNL 1388 Query: 923 TSWRTICL*LNFLIKS--HISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAE 750 W + F H + +M FEV Y F ++A +R Sbjct: 1389 KEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATY 1448 Query: 749 MVRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANLV 582 + +IH K K I K + N R++V F+ D VW+H +K R PQ RK+ L+ Sbjct: 1449 VKKIHEKTKEAIEKRSKYYAAWANKNRKKVTFEPGDLVWVHLRKDRFPQKRKSKLM 1504 Score = 54.7 bits (130), Expect(2) = 5e-35 Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 19/92 (20%) Frame = -2 Query: 550 EINDNAYKIDLPSKYTVHNVFNVSDLSSCV-VGEPLDSRTNPFQEGRDD-----ITPRSS 389 +INDNAYKI+LP Y V + FNV+DL+ + + SR+ PFQEG DD + SS Sbjct: 1516 KINDNAYKIELPEDYGVSSTFNVADLTPFFGLEDSESSRSTPFQEGEDDEDIPTVHATSS 1575 Query: 388 R-------------PFTRS*AKELQALQDMFM 332 P TRS AK+LQ + F+ Sbjct: 1576 TKQPSSNTKDTIQGPLTRSRAKKLQVQVNSFL 1607 >gb|AAT85159.1| unknown protein [Oryza sativa Japonica Group] gi|52353557|gb|AAU44123.1| putative polyprotein [Oryza sativa Japonica Group] Length = 681 Score = 121 bits (303), Expect(2) = 5e-35 Identities = 66/176 (37%), Positives = 94/176 (53%), Gaps = 2/176 (1%) Frame = -1 Query: 1103 RTIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKP 924 +TIVSDRD+KF S+FWK+LW LGT+L+FST C+ +TD + E+VNRTL +LR +I Sbjct: 297 KTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTLSMLLRALIKKNL 356 Query: 923 TSWRTICL*LNFLIKS--HISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAE 750 W + F H + +M FEV Y F ++A +R Sbjct: 357 KEWEECLPHVEFAYNRAVHSTTNMCPFEVVYGFKPLSPIDLLPLPLQERSDMEASKRATY 416 Query: 749 MVRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANLV 582 + +IH K K I K + N R++V F+ D VW+H +K R PQ RK+ L+ Sbjct: 417 VKKIHEKTKEAIEKRSKYYAAWANKNRKKVTFEPGDLVWVHLRKDRFPQKRKSKLM 472 Score = 54.7 bits (130), Expect(2) = 5e-35 Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 19/92 (20%) Frame = -2 Query: 550 EINDNAYKIDLPSKYTVHNVFNVSDLSSCV-VGEPLDSRTNPFQEGRDD-----ITPRSS 389 +INDNAYKI+LP Y V + FNV+DL+ + + SR+ PFQEG DD + SS Sbjct: 484 KINDNAYKIELPEDYGVSSTFNVADLTPFFGLEDSESSRSTPFQEGEDDEDIPTVHATSS 543 Query: 388 R-------------PFTRS*AKELQALQDMFM 332 P TRS AK+LQ + F+ Sbjct: 544 TKQPSSNTKDTIQGPLTRSRAKKLQVQVNSFL 575 >gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare] Length = 1717 Score = 129 bits (324), Expect(2) = 8e-35 Identities = 70/175 (40%), Positives = 97/175 (55%), Gaps = 2/175 (1%) Frame = -1 Query: 1100 TIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKPT 921 TIVSDRD+KF SHFW+ LW LGTKL+FST C+ +TD + E+VNR+L TMLR V+ Sbjct: 1383 TIVSDRDAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVLKTNLK 1442 Query: 920 SWRTICL*LNFLIKS--HISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAEM 747 W + F H + M FE+ Y F S V+ DAK+R + Sbjct: 1443 LWEECLPHIEFAYNRSLHSTTKMCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELI 1502 Query: 746 VRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANLV 582 +++H K NI +MN + + GR+ V F D VW+H +K R P +RK+ L+ Sbjct: 1503 LKMHELTKENIERMNARYKLAGDKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLM 1557 Score = 45.8 bits (107), Expect(2) = 8e-35 Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 12/77 (15%) Frame = -2 Query: 550 EINDNAYKIDLPSKYTVHNVFNVSDLSSCVVGE-PLDSRTNPFQEGRDD------ITPRS 392 +INDNAY+++LP + V FN++DL + E L SRT QEG DD TP + Sbjct: 1569 KINDNAYRLELPXDFGVSPTFNIADLKPYLGEEDELPSRTTSVQEGEDDEDINTIATPTA 1628 Query: 391 -----SRPFTRS*AKEL 356 + P TR+ A++L Sbjct: 1629 PAAIHTGPVTRARARQL 1645 >dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] Length = 1587 Score = 129 bits (325), Expect(2) = 2e-34 Identities = 72/190 (37%), Positives = 101/190 (53%), Gaps = 5/190 (2%) Frame = -1 Query: 1100 TIVSDRDSKFFSHFWKSLWNVLGTKLMFSTFCYSRTDRRIEIVNRTLETMLRCVITGKPT 921 TIVSDRD+KF SHFW++LW LGTKL+FST C+ +TD + E+VNRTL TMLR V+ Sbjct: 1355 TIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVLKKNIK 1414 Query: 920 SWRTICL*LNFLI--KSHISISMTSFEVCYEFNXXXXXXXXXXXSDVVVSLDAKQRKAEM 747 W + F H + FE+ Y + V+ DAK R M Sbjct: 1415 MWEECLPHVEFAYNRSQHSTTKKCPFEIVYGLLPRAPIDLLPLPTSERVNFDAKYRAELM 1474 Query: 746 VRIHAKVKANIGKMNTKVDKRQN*GRQRVNFQSDDWVWIHFQKKRSPQMRKANLV---QG 576 +++H K NI +MN K + G++ V F+ D VW+H +K R P +RK+ L+ G Sbjct: 1475 LKLHETTKENIERMNIKYKLAGSKGKKHVAFEPGDLVWLHLRKDRFPNLRKSKLLPRADG 1534 Query: 575 EMSHLKSLRD 546 L+ + D Sbjct: 1535 PFKVLQKIND 1544 Score = 43.9 bits (102), Expect(2) = 2e-34 Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%) Frame = -2 Query: 550 EINDNAYKIDLPSKYTVHNVFNVSDLSSCVVGE-PLDSRTNPFQEG 416 +INDNAYK++LP+ + V FN++DL + E L+SRT QEG Sbjct: 1541 KINDNAYKLELPADFGVSPTFNIADLKPYLGEEDELESRTTQMQEG 1586