BLASTX nr result

ID: Atropa21_contig00028758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00028758
         (837 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354967.1| PREDICTED: uncharacterized protein LOC102599...    74   1e-11
ref|XP_006338142.1| PREDICTED: uncharacterized protein LOC102586...    59   2e-06

>ref|XP_006354967.1| PREDICTED: uncharacterized protein LOC102599840 [Solanum tuberosum]
          Length = 288

 Score = 73.6 bits (179), Expect(2) = 1e-11
 Identities = 38/114 (33%), Positives = 61/114 (53%)
 Frame = -1

Query: 345 CKGYQYPRISQALDAMIKMHKLVILVLLETRMVDHKPLIDAFDFSNHLQSPVVDLSGGIV 166
           C+G    +    + A+I  H   IL L ETRM D   ++ A D+++ +Q P    SGGI 
Sbjct: 38  CRGANNAKFMNNIRALIDSHNPTILALTETRMEDLDKILQALDYTDVIQVPAFGYSGGIA 97

Query: 165 IMWKDDILKLEDLSISQ*GIHAMVKVIFTSASWLFSAIYASNSLNNRMKL*DNL 4
           ++W++  + +E   I++  IH  +KV  +   + FS IYA N+   R  L +NL
Sbjct: 98  LLWRNSEINVEPFVITEQEIHVTIKVSSSFPKFFFSVIYAKNTYGLRKILWENL 151



 Score = 23.1 bits (48), Expect(2) = 1e-11
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 389 NSSPLTHMINFIIWNARGTN 330
           ++SP + ++   +WN RG N
Sbjct: 23  SNSPESPLMKIFLWNCRGAN 42


>ref|XP_006338142.1| PREDICTED: uncharacterized protein LOC102586857 [Solanum tuberosum]
          Length = 236

 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 33/114 (28%), Positives = 57/114 (50%)
 Frame = -1

Query: 345 CKGYQYPRISQALDAMIKMHKLVILVLLETRMVDHKPLIDAFDFSNHLQSPVVDLSGGIV 166
           C+G       + +   I+ H   IL L+ETRM DH  ++ A DF++ +Q P +  S GI 
Sbjct: 45  CRGANNGNFRKNMRTHIEFHNPTILALIETRMEDHNRILHALDFTDIIQVPALGYSRGIA 104

Query: 165 IMWKDDILKLEDLSISQ*GIHAMVKVIFTSASWLFSAIYASNSLNNRMKL*DNL 4
           ++W++  + +E   +++  IHA ++      + L   I  +   N   KL  NL
Sbjct: 105 LLWRNSEITIEPFVLTEQEIHATIEHHRVPTATLVPIILWNIWKNRNSKLYKNL 158


Top