BLASTX nr result
ID: Atropa21_contig00028732
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00028732
(502 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006366227.1| PREDICTED: polyadenylate-binding protein 2-A... 138 7e-31
ref|XP_006580259.1| PREDICTED: polyadenylate-binding protein 2 i... 133 2e-29
ref|XP_004250109.1| PREDICTED: polyadenylate-binding protein 2-l... 133 2e-29
ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2 i... 133 2e-29
ref|XP_006353218.1| PREDICTED: polyadenylate-binding protein 2-A... 132 6e-29
ref|XP_006353217.1| PREDICTED: polyadenylate-binding protein 2-A... 132 6e-29
gb|ESW31711.1| hypothetical protein PHAVU_002G261500g [Phaseolus... 130 1e-28
ref|XP_006585263.1| PREDICTED: polyadenylate-binding protein 2-A... 130 2e-28
ref|XP_004504101.1| PREDICTED: polyadenylate-binding protein 2-A... 130 2e-28
ref|XP_006466250.1| PREDICTED: polyadenylate-binding protein 2-l... 129 5e-28
gb|AHA84276.1| polyadenylate-binding protein 2 [Phaseolus vulgaris] 129 5e-28
ref|XP_006426355.1| hypothetical protein CICLE_v100264481mg, par... 129 5e-28
gb|EMJ07057.1| hypothetical protein PRUPE_ppa011157mg [Prunus pe... 129 5e-28
gb|ACJ84516.1| unknown [Medicago truncatula] gi|388501418|gb|AFK... 129 5e-28
gb|AGV54499.1| RNA binding/nucleic acid binding [Phaseolus vulga... 128 9e-28
ref|XP_004288178.1| PREDICTED: polyadenylate-binding protein 2-l... 128 9e-28
ref|XP_004288177.1| PREDICTED: polyadenylate-binding protein 2-l... 128 9e-28
gb|ACU19123.1| unknown [Glycine max] 127 2e-27
ref|XP_002531675.1| poly-A binding protein, putative [Ricinus co... 125 4e-27
ref|XP_002306300.1| hypothetical protein POPTR_0005s07440g [Popu... 125 6e-27
>ref|XP_006366227.1| PREDICTED: polyadenylate-binding protein 2-A-like [Solanum
tuberosum]
Length = 216
Score = 138 bits (348), Expect = 7e-31
Identities = 68/93 (73%), Positives = 72/93 (77%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEF+EQEA+QEALQLNESELHGRQLKVMPKRTNVPGMKQF PRRF+PY
Sbjct: 120 TDKFGQPKGFAYVEFVEQEAIQEALQLNESELHGRQLKVMPKRTNVPGMKQFHPRRFSPY 179
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
YG GK PRFRRASR+
Sbjct: 180 QPYGFRRPYAPAPYFYSPYGYGKAPRFRRASRY 212
>ref|XP_006580259.1| PREDICTED: polyadenylate-binding protein 2 isoform X2 [Glycine max]
Length = 141
Score = 133 bits (335), Expect = 2e-29
Identities = 68/93 (73%), Positives = 73/93 (78%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 46 TDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 105
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
MAYG GKVPRFRR +R+
Sbjct: 106 MAYG-FRRPYTPPYFYSPYGYGKVPRFRRPNRY 137
>ref|XP_004250109.1| PREDICTED: polyadenylate-binding protein 2-like [Solanum
lycopersicum]
Length = 219
Score = 133 bits (335), Expect = 2e-29
Identities = 69/93 (74%), Positives = 70/93 (75%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRP RFNPY
Sbjct: 123 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPGRFNPY 182
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
+ GKVPRFRR RF
Sbjct: 183 LGGYRSRRPYAAPYFYSPYGYGKVPRFRRPGRF 215
>ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2 isoform X1 [Glycine max]
Length = 215
Score = 133 bits (335), Expect = 2e-29
Identities = 68/93 (73%), Positives = 73/93 (78%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 120 TDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 179
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
MAYG GKVPRFRR +R+
Sbjct: 180 MAYG-FRRPYTPPYFYSPYGYGKVPRFRRPNRY 211
>ref|XP_006353218.1| PREDICTED: polyadenylate-binding protein 2-A-like isoform X2
[Solanum tuberosum]
Length = 152
Score = 132 bits (331), Expect = 6e-29
Identities = 67/93 (72%), Positives = 70/93 (75%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEFIEQEA+QEALQLNESELHGRQLKV+PKRTNVPGMKQFRP RFNPY
Sbjct: 56 TDKFGQPKGFAYVEFIEQEAIQEALQLNESELHGRQLKVVPKRTNVPGMKQFRPGRFNPY 115
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
+ GKVPRFRR RF
Sbjct: 116 LGGHRSRRPYAAPYFYSPYGYGKVPRFRRPGRF 148
>ref|XP_006353217.1| PREDICTED: polyadenylate-binding protein 2-A-like isoform X1
[Solanum tuberosum]
Length = 218
Score = 132 bits (331), Expect = 6e-29
Identities = 67/93 (72%), Positives = 70/93 (75%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEFIEQEA+QEALQLNESELHGRQLKV+PKRTNVPGMKQFRP RFNPY
Sbjct: 122 TDKFGQPKGFAYVEFIEQEAIQEALQLNESELHGRQLKVVPKRTNVPGMKQFRPGRFNPY 181
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
+ GKVPRFRR RF
Sbjct: 182 LGGHRSRRPYAAPYFYSPYGYGKVPRFRRPGRF 214
>gb|ESW31711.1| hypothetical protein PHAVU_002G261500g [Phaseolus vulgaris]
Length = 215
Score = 130 bits (328), Expect = 1e-28
Identities = 67/93 (72%), Positives = 72/93 (77%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEF+E EAVQEA+ LNESELHGRQLKV+PKRTNVPGMKQ RPRRFNPY
Sbjct: 120 TDKFGQPKGFAYVEFVEVEAVQEAILLNESELHGRQLKVLPKRTNVPGMKQHRPRRFNPY 179
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
MAYG GKVPRFRR +R+
Sbjct: 180 MAYG-FRRPYTPPYFFSPYGYGKVPRFRRPNRY 211
>ref|XP_006585263.1| PREDICTED: polyadenylate-binding protein 2-A [Glycine max]
Length = 218
Score = 130 bits (327), Expect = 2e-28
Identities = 67/93 (72%), Positives = 72/93 (77%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV+PKRTNVPGMKQ+RPR FNPY
Sbjct: 126 TDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRCFNPY 185
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
MAYG GKVPRFRR +R+
Sbjct: 186 MAYG----FRRPYTPYLYSPYGKVPRFRRPNRY 214
>ref|XP_004504101.1| PREDICTED: polyadenylate-binding protein 2-A-like [Cicer arietinum]
Length = 221
Score = 130 bits (327), Expect = 2e-28
Identities = 66/93 (70%), Positives = 72/93 (77%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEF+E EAVQEAL L ESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 126 TDKFGQPKGFAYVEFVETEAVQEALLLTESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 185
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
MAYG GK PR+RRA+R+
Sbjct: 186 MAYG-FRRPYPPPYMYSPYGYGKAPRYRRATRY 217
>ref|XP_006466250.1| PREDICTED: polyadenylate-binding protein 2-like [Citrus sinensis]
Length = 218
Score = 129 bits (323), Expect = 5e-28
Identities = 66/93 (70%), Positives = 71/93 (76%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEF+E +AVQEALQLNESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 123 TDKFGQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 182
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
M Y GKVPRFRR R+
Sbjct: 183 MGY-RGRRPYVPPYFYSPYGYGKVPRFRRPMRY 214
>gb|AHA84276.1| polyadenylate-binding protein 2 [Phaseolus vulgaris]
Length = 211
Score = 129 bits (323), Expect = 5e-28
Identities = 66/93 (70%), Positives = 71/93 (76%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEF+E EAVQEA+ LNESELHGRQLKV+PKRTNVPGMKQ RPRRFNPY
Sbjct: 116 TDKFGQPKGFAYVEFVEVEAVQEAILLNESELHGRQLKVLPKRTNVPGMKQHRPRRFNPY 175
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
M YG GKVPRFRR +R+
Sbjct: 176 MXYG-FRRPYTPPYFFSPYGYGKVPRFRRPNRY 207
>ref|XP_006426355.1| hypothetical protein CICLE_v100264481mg, partial [Citrus
clementina] gi|557528345|gb|ESR39595.1| hypothetical
protein CICLE_v100264481mg, partial [Citrus clementina]
Length = 122
Score = 129 bits (323), Expect = 5e-28
Identities = 66/93 (70%), Positives = 71/93 (76%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEF+E +AVQEALQLNESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 27 TDKFGQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 86
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
M Y GKVPRFRR R+
Sbjct: 87 MGY-RGRRPYVPPYFYSPYGYGKVPRFRRPMRY 118
>gb|EMJ07057.1| hypothetical protein PRUPE_ppa011157mg [Prunus persica]
Length = 221
Score = 129 bits (323), Expect = 5e-28
Identities = 66/93 (70%), Positives = 71/93 (76%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 126 TDKFGQPKGFAYVEFLETEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 185
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
M Y GKVPRFRR +R+
Sbjct: 186 MGY-RFRRPYVPPYFYSPYGYGKVPRFRRPARY 217
>gb|ACJ84516.1| unknown [Medicago truncatula] gi|388501418|gb|AFK38775.1| unknown
[Medicago truncatula]
Length = 216
Score = 129 bits (323), Expect = 5e-28
Identities = 65/93 (69%), Positives = 72/93 (77%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEF+E EAVQEAL L+ESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 121 TDKFGQPKGFAYVEFVETEAVQEALLLSESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 180
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
MAYG GK PR+RR +R+
Sbjct: 181 MAYG-FRRPYAPPYMYSPYGYGKAPRYRRPNRY 212
>gb|AGV54499.1| RNA binding/nucleic acid binding [Phaseolus vulgaris]
Length = 215
Score = 128 bits (321), Expect = 9e-28
Identities = 66/93 (70%), Positives = 71/93 (76%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEF+E EAVQEA+ LNESELHGRQLKV+PKRTNVPGMKQ RPRRFNPY
Sbjct: 120 TDKFGQPKGFAYVEFVEVEAVQEAILLNESELHGRQLKVLPKRTNVPGMKQHRPRRFNPY 179
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
MAYG GKVPRFRR + +
Sbjct: 180 MAYG-FRRPYTPPYFFSPYGYGKVPRFRRPNGY 211
>ref|XP_004288178.1| PREDICTED: polyadenylate-binding protein 2-like [Fragaria vesca
subsp. vesca]
Length = 222
Score = 128 bits (321), Expect = 9e-28
Identities = 66/93 (70%), Positives = 71/93 (76%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV+PKRTNVPGMKQFRPRRF+PY
Sbjct: 127 TDKFGQPKGFAYVEFLETEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQFRPRRFSPY 186
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
M Y GKVPRFRR +R+
Sbjct: 187 MGY-RFRRSYVPPYFYSPYGYGKVPRFRRPARY 218
>ref|XP_004288177.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Fragaria
vesca subsp. vesca]
Length = 226
Score = 128 bits (321), Expect = 9e-28
Identities = 65/93 (69%), Positives = 71/93 (76%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKG+AYVEF+E EAVQ+AL LNESELHGRQLKV+PKRTNVPGMKQFRPRRFNPY
Sbjct: 131 TDKFGQPKGYAYVEFLEAEAVQKALALNESELHGRQLKVLPKRTNVPGMKQFRPRRFNPY 190
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
M Y GKVPRFRR +R+
Sbjct: 191 MGYS-FRRPYVPPYFYSPYGYGKVPRFRRPARY 222
>gb|ACU19123.1| unknown [Glycine max]
Length = 205
Score = 127 bits (319), Expect = 2e-27
Identities = 59/64 (92%), Positives = 62/64 (96%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 120 TDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 179
Query: 320 MAYG 309
MAYG
Sbjct: 180 MAYG 183
>ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
gi|223528706|gb|EEF30719.1| poly-A binding protein,
putative [Ricinus communis]
Length = 218
Score = 125 bits (315), Expect = 4e-27
Identities = 64/93 (68%), Positives = 69/93 (74%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEF+E EA+QEAL LNESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 123 TDKFGQPKGFAYVEFLEVEAIQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 182
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
M Y GK PRFRR R+
Sbjct: 183 MGY-RFRRPYVPPYFYSPYGYGKAPRFRRPMRY 214
>ref|XP_002306300.1| hypothetical protein POPTR_0005s07440g [Populus trichocarpa]
gi|222855749|gb|EEE93296.1| hypothetical protein
POPTR_0005s07440g [Populus trichocarpa]
Length = 218
Score = 125 bits (314), Expect = 6e-27
Identities = 65/93 (69%), Positives = 69/93 (74%)
Frame = -3
Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
TDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV PKRTNVPGMKQ+RPRR NPY
Sbjct: 123 TDKFGQPKGFAYVEFLEVEAVQEALALNESELHGRQLKVSPKRTNVPGMKQYRPRRINPY 182
Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
M Y GKVPRFRR+ R+
Sbjct: 183 MGY-RFRRPYAPPYFYSPYGYGKVPRFRRSMRY 214