BLASTX nr result

ID: Atropa21_contig00028732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00028732
         (502 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006366227.1| PREDICTED: polyadenylate-binding protein 2-A...   138   7e-31
ref|XP_006580259.1| PREDICTED: polyadenylate-binding protein 2 i...   133   2e-29
ref|XP_004250109.1| PREDICTED: polyadenylate-binding protein 2-l...   133   2e-29
ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2 i...   133   2e-29
ref|XP_006353218.1| PREDICTED: polyadenylate-binding protein 2-A...   132   6e-29
ref|XP_006353217.1| PREDICTED: polyadenylate-binding protein 2-A...   132   6e-29
gb|ESW31711.1| hypothetical protein PHAVU_002G261500g [Phaseolus...   130   1e-28
ref|XP_006585263.1| PREDICTED: polyadenylate-binding protein 2-A...   130   2e-28
ref|XP_004504101.1| PREDICTED: polyadenylate-binding protein 2-A...   130   2e-28
ref|XP_006466250.1| PREDICTED: polyadenylate-binding protein 2-l...   129   5e-28
gb|AHA84276.1| polyadenylate-binding protein 2 [Phaseolus vulgaris]   129   5e-28
ref|XP_006426355.1| hypothetical protein CICLE_v100264481mg, par...   129   5e-28
gb|EMJ07057.1| hypothetical protein PRUPE_ppa011157mg [Prunus pe...   129   5e-28
gb|ACJ84516.1| unknown [Medicago truncatula] gi|388501418|gb|AFK...   129   5e-28
gb|AGV54499.1| RNA binding/nucleic acid binding [Phaseolus vulga...   128   9e-28
ref|XP_004288178.1| PREDICTED: polyadenylate-binding protein 2-l...   128   9e-28
ref|XP_004288177.1| PREDICTED: polyadenylate-binding protein 2-l...   128   9e-28
gb|ACU19123.1| unknown [Glycine max]                                  127   2e-27
ref|XP_002531675.1| poly-A binding protein, putative [Ricinus co...   125   4e-27
ref|XP_002306300.1| hypothetical protein POPTR_0005s07440g [Popu...   125   6e-27

>ref|XP_006366227.1| PREDICTED: polyadenylate-binding protein 2-A-like [Solanum
           tuberosum]
          Length = 216

 Score =  138 bits (348), Expect = 7e-31
 Identities = 68/93 (73%), Positives = 72/93 (77%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEF+EQEA+QEALQLNESELHGRQLKVMPKRTNVPGMKQF PRRF+PY
Sbjct: 120 TDKFGQPKGFAYVEFVEQEAIQEALQLNESELHGRQLKVMPKRTNVPGMKQFHPRRFSPY 179

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
             YG                 GK PRFRRASR+
Sbjct: 180 QPYGFRRPYAPAPYFYSPYGYGKAPRFRRASRY 212


>ref|XP_006580259.1| PREDICTED: polyadenylate-binding protein 2 isoform X2 [Glycine max]
          Length = 141

 Score =  133 bits (335), Expect = 2e-29
 Identities = 68/93 (73%), Positives = 73/93 (78%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 46  TDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 105

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           MAYG                 GKVPRFRR +R+
Sbjct: 106 MAYG-FRRPYTPPYFYSPYGYGKVPRFRRPNRY 137


>ref|XP_004250109.1| PREDICTED: polyadenylate-binding protein 2-like [Solanum
           lycopersicum]
          Length = 219

 Score =  133 bits (335), Expect = 2e-29
 Identities = 69/93 (74%), Positives = 70/93 (75%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRP RFNPY
Sbjct: 123 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPGRFNPY 182

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           +                    GKVPRFRR  RF
Sbjct: 183 LGGYRSRRPYAAPYFYSPYGYGKVPRFRRPGRF 215


>ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2 isoform X1 [Glycine max]
          Length = 215

 Score =  133 bits (335), Expect = 2e-29
 Identities = 68/93 (73%), Positives = 73/93 (78%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 120 TDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 179

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           MAYG                 GKVPRFRR +R+
Sbjct: 180 MAYG-FRRPYTPPYFYSPYGYGKVPRFRRPNRY 211


>ref|XP_006353218.1| PREDICTED: polyadenylate-binding protein 2-A-like isoform X2
           [Solanum tuberosum]
          Length = 152

 Score =  132 bits (331), Expect = 6e-29
 Identities = 67/93 (72%), Positives = 70/93 (75%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEFIEQEA+QEALQLNESELHGRQLKV+PKRTNVPGMKQFRP RFNPY
Sbjct: 56  TDKFGQPKGFAYVEFIEQEAIQEALQLNESELHGRQLKVVPKRTNVPGMKQFRPGRFNPY 115

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           +                    GKVPRFRR  RF
Sbjct: 116 LGGHRSRRPYAAPYFYSPYGYGKVPRFRRPGRF 148


>ref|XP_006353217.1| PREDICTED: polyadenylate-binding protein 2-A-like isoform X1
           [Solanum tuberosum]
          Length = 218

 Score =  132 bits (331), Expect = 6e-29
 Identities = 67/93 (72%), Positives = 70/93 (75%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEFIEQEA+QEALQLNESELHGRQLKV+PKRTNVPGMKQFRP RFNPY
Sbjct: 122 TDKFGQPKGFAYVEFIEQEAIQEALQLNESELHGRQLKVVPKRTNVPGMKQFRPGRFNPY 181

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           +                    GKVPRFRR  RF
Sbjct: 182 LGGHRSRRPYAAPYFYSPYGYGKVPRFRRPGRF 214


>gb|ESW31711.1| hypothetical protein PHAVU_002G261500g [Phaseolus vulgaris]
          Length = 215

 Score =  130 bits (328), Expect = 1e-28
 Identities = 67/93 (72%), Positives = 72/93 (77%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEF+E EAVQEA+ LNESELHGRQLKV+PKRTNVPGMKQ RPRRFNPY
Sbjct: 120 TDKFGQPKGFAYVEFVEVEAVQEAILLNESELHGRQLKVLPKRTNVPGMKQHRPRRFNPY 179

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           MAYG                 GKVPRFRR +R+
Sbjct: 180 MAYG-FRRPYTPPYFFSPYGYGKVPRFRRPNRY 211


>ref|XP_006585263.1| PREDICTED: polyadenylate-binding protein 2-A [Glycine max]
          Length = 218

 Score =  130 bits (327), Expect = 2e-28
 Identities = 67/93 (72%), Positives = 72/93 (77%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV+PKRTNVPGMKQ+RPR FNPY
Sbjct: 126 TDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRCFNPY 185

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           MAYG                 GKVPRFRR +R+
Sbjct: 186 MAYG----FRRPYTPYLYSPYGKVPRFRRPNRY 214


>ref|XP_004504101.1| PREDICTED: polyadenylate-binding protein 2-A-like [Cicer arietinum]
          Length = 221

 Score =  130 bits (327), Expect = 2e-28
 Identities = 66/93 (70%), Positives = 72/93 (77%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEF+E EAVQEAL L ESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 126 TDKFGQPKGFAYVEFVETEAVQEALLLTESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 185

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           MAYG                 GK PR+RRA+R+
Sbjct: 186 MAYG-FRRPYPPPYMYSPYGYGKAPRYRRATRY 217


>ref|XP_006466250.1| PREDICTED: polyadenylate-binding protein 2-like [Citrus sinensis]
          Length = 218

 Score =  129 bits (323), Expect = 5e-28
 Identities = 66/93 (70%), Positives = 71/93 (76%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEF+E +AVQEALQLNESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 123 TDKFGQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 182

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           M Y                  GKVPRFRR  R+
Sbjct: 183 MGY-RGRRPYVPPYFYSPYGYGKVPRFRRPMRY 214


>gb|AHA84276.1| polyadenylate-binding protein 2 [Phaseolus vulgaris]
          Length = 211

 Score =  129 bits (323), Expect = 5e-28
 Identities = 66/93 (70%), Positives = 71/93 (76%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEF+E EAVQEA+ LNESELHGRQLKV+PKRTNVPGMKQ RPRRFNPY
Sbjct: 116 TDKFGQPKGFAYVEFVEVEAVQEAILLNESELHGRQLKVLPKRTNVPGMKQHRPRRFNPY 175

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           M YG                 GKVPRFRR +R+
Sbjct: 176 MXYG-FRRPYTPPYFFSPYGYGKVPRFRRPNRY 207


>ref|XP_006426355.1| hypothetical protein CICLE_v100264481mg, partial [Citrus
           clementina] gi|557528345|gb|ESR39595.1| hypothetical
           protein CICLE_v100264481mg, partial [Citrus clementina]
          Length = 122

 Score =  129 bits (323), Expect = 5e-28
 Identities = 66/93 (70%), Positives = 71/93 (76%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEF+E +AVQEALQLNESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 27  TDKFGQPKGFAYVEFLEIDAVQEALQLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 86

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           M Y                  GKVPRFRR  R+
Sbjct: 87  MGY-RGRRPYVPPYFYSPYGYGKVPRFRRPMRY 118


>gb|EMJ07057.1| hypothetical protein PRUPE_ppa011157mg [Prunus persica]
          Length = 221

 Score =  129 bits (323), Expect = 5e-28
 Identities = 66/93 (70%), Positives = 71/93 (76%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 126 TDKFGQPKGFAYVEFLETEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 185

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           M Y                  GKVPRFRR +R+
Sbjct: 186 MGY-RFRRPYVPPYFYSPYGYGKVPRFRRPARY 217


>gb|ACJ84516.1| unknown [Medicago truncatula] gi|388501418|gb|AFK38775.1| unknown
           [Medicago truncatula]
          Length = 216

 Score =  129 bits (323), Expect = 5e-28
 Identities = 65/93 (69%), Positives = 72/93 (77%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEF+E EAVQEAL L+ESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 121 TDKFGQPKGFAYVEFVETEAVQEALLLSESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 180

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           MAYG                 GK PR+RR +R+
Sbjct: 181 MAYG-FRRPYAPPYMYSPYGYGKAPRYRRPNRY 212


>gb|AGV54499.1| RNA binding/nucleic acid binding [Phaseolus vulgaris]
          Length = 215

 Score =  128 bits (321), Expect = 9e-28
 Identities = 66/93 (70%), Positives = 71/93 (76%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEF+E EAVQEA+ LNESELHGRQLKV+PKRTNVPGMKQ RPRRFNPY
Sbjct: 120 TDKFGQPKGFAYVEFVEVEAVQEAILLNESELHGRQLKVLPKRTNVPGMKQHRPRRFNPY 179

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           MAYG                 GKVPRFRR + +
Sbjct: 180 MAYG-FRRPYTPPYFFSPYGYGKVPRFRRPNGY 211


>ref|XP_004288178.1| PREDICTED: polyadenylate-binding protein 2-like [Fragaria vesca
           subsp. vesca]
          Length = 222

 Score =  128 bits (321), Expect = 9e-28
 Identities = 66/93 (70%), Positives = 71/93 (76%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV+PKRTNVPGMKQFRPRRF+PY
Sbjct: 127 TDKFGQPKGFAYVEFLETEAVQEALVLNESELHGRQLKVLPKRTNVPGMKQFRPRRFSPY 186

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           M Y                  GKVPRFRR +R+
Sbjct: 187 MGY-RFRRSYVPPYFYSPYGYGKVPRFRRPARY 218


>ref|XP_004288177.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Fragaria
           vesca subsp. vesca]
          Length = 226

 Score =  128 bits (321), Expect = 9e-28
 Identities = 65/93 (69%), Positives = 71/93 (76%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKG+AYVEF+E EAVQ+AL LNESELHGRQLKV+PKRTNVPGMKQFRPRRFNPY
Sbjct: 131 TDKFGQPKGYAYVEFLEAEAVQKALALNESELHGRQLKVLPKRTNVPGMKQFRPRRFNPY 190

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           M Y                  GKVPRFRR +R+
Sbjct: 191 MGYS-FRRPYVPPYFYSPYGYGKVPRFRRPARY 222


>gb|ACU19123.1| unknown [Glycine max]
          Length = 205

 Score =  127 bits (319), Expect = 2e-27
 Identities = 59/64 (92%), Positives = 62/64 (96%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 120 TDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 179

Query: 320 MAYG 309
           MAYG
Sbjct: 180 MAYG 183


>ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
           gi|223528706|gb|EEF30719.1| poly-A binding protein,
           putative [Ricinus communis]
          Length = 218

 Score =  125 bits (315), Expect = 4e-27
 Identities = 64/93 (68%), Positives = 69/93 (74%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEF+E EA+QEAL LNESELHGRQLKV+PKRTNVPGMKQ+RPRRFNPY
Sbjct: 123 TDKFGQPKGFAYVEFLEVEAIQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFNPY 182

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           M Y                  GK PRFRR  R+
Sbjct: 183 MGY-RFRRPYVPPYFYSPYGYGKAPRFRRPMRY 214


>ref|XP_002306300.1| hypothetical protein POPTR_0005s07440g [Populus trichocarpa]
           gi|222855749|gb|EEE93296.1| hypothetical protein
           POPTR_0005s07440g [Populus trichocarpa]
          Length = 218

 Score =  125 bits (314), Expect = 6e-27
 Identities = 65/93 (69%), Positives = 69/93 (74%)
 Frame = -3

Query: 500 TDKFGQPKGFAYVEFIEQEAVQEALQLNESELHGRQLKVMPKRTNVPGMKQFRPRRFNPY 321
           TDKFGQPKGFAYVEF+E EAVQEAL LNESELHGRQLKV PKRTNVPGMKQ+RPRR NPY
Sbjct: 123 TDKFGQPKGFAYVEFLEVEAVQEALALNESELHGRQLKVSPKRTNVPGMKQYRPRRINPY 182

Query: 320 MAYGXXXXXXXXXXXXXXXXXGKVPRFRRASRF 222
           M Y                  GKVPRFRR+ R+
Sbjct: 183 MGY-RFRRPYAPPYFYSPYGYGKVPRFRRSMRY 214


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