BLASTX nr result
ID: Atropa21_contig00028652
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00028652
(488 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004249453.1| PREDICTED: growth-regulating factor 2-like [... 169 5e-40
ref|XP_006339314.1| PREDICTED: growth-regulating factor 3-like [... 165 5e-39
ref|XP_004246560.1| PREDICTED: growth-regulating factor 4-like [... 118 7e-25
ref|XP_006341255.1| PREDICTED: growth-regulating factor 3-like [... 115 8e-24
gb|EOY08148.1| Growth-regulating factor 3 isoform 2 [Theobroma c... 100 3e-19
gb|EOY08147.1| Growth-regulating factor 3 isoform 1 [Theobroma c... 100 3e-19
ref|XP_004494150.1| PREDICTED: growth-regulating factor 3-like [... 98 1e-18
ref|XP_003553589.1| PREDICTED: growth-regulating factor 3-like [... 94 1e-17
ref|XP_002534110.1| conserved hypothetical protein [Ricinus comm... 94 2e-17
ref|XP_006430277.1| hypothetical protein CICLE_v10011856mg [Citr... 93 3e-17
ref|XP_006481829.1| PREDICTED: growth-regulating factor 3-like [... 92 9e-17
gb|ADL36702.1| GRF domain class transcription factor [Malus dome... 91 2e-16
ref|XP_002277233.2| PREDICTED: uncharacterized protein LOC100249... 89 5e-16
emb|CAN66216.1| hypothetical protein VITISV_041165 [Vitis vinifera] 89 5e-16
gb|AFK43856.1| unknown [Medicago truncatula] 88 1e-15
ref|XP_003625769.1| GRL3 [Medicago truncatula] gi|355500784|gb|A... 88 1e-15
gb|ESW34859.1| hypothetical protein PHAVU_001G187500g [Phaseolus... 87 3e-15
gb|EMJ03316.1| hypothetical protein PRUPE_ppa006912mg [Prunus pe... 87 3e-15
ref|XP_002881441.1| hypothetical protein ARALYDRAFT_482616 [Arab... 85 9e-15
dbj|BAC42083.1| unknown protein [Arabidopsis thaliana] 85 1e-14
>ref|XP_004249453.1| PREDICTED: growth-regulating factor 2-like [Solanum lycopersicum]
Length = 389
Score = 169 bits (427), Expect = 5e-40
Identities = 91/102 (89%), Positives = 93/102 (91%), Gaps = 4/102 (3%)
Frame = -3
Query: 486 WPRQQLQEGDNAATSLSISMPGGGGNPSSDFSLKLSTGNDYDS---VSNIKRSTRGTS-H 319
WPRQQLQEGDNAATSLSISMPG GGNPSSDFSLKLSTGN YDS VSN++RST GTS H
Sbjct: 288 WPRQQLQEGDNAATSLSISMPGVGGNPSSDFSLKLSTGNYYDSGTQVSNVERSTWGTSHH 347
Query: 318 QVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
VASMGGPLAEALRSSTTNSSPTSVLHQLARGS SEASYIST
Sbjct: 348 HVASMGGPLAEALRSSTTNSSPTSVLHQLARGSASEASYIST 389
>ref|XP_006339314.1| PREDICTED: growth-regulating factor 3-like [Solanum tuberosum]
Length = 391
Score = 165 bits (418), Expect = 5e-39
Identities = 90/103 (87%), Positives = 94/103 (91%), Gaps = 5/103 (4%)
Frame = -3
Query: 486 WPRQQ-LQEGDNAATSLSISMPGGGGNPSSDFSLKLSTGNDYD---SVSNIKRSTRGTSH 319
WPRQQ LQEGDNAATSLSISMPGGGGN SSDFSLKLSTGNDYD VSN+++ST GTSH
Sbjct: 289 WPRQQQLQEGDNAATSLSISMPGGGGNTSSDFSLKLSTGNDYDLGTQVSNVEQSTWGTSH 348
Query: 318 -QVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
QVASMGGPLAEALRSS TNSSPTSVLH+LARGSTSEASYIST
Sbjct: 349 HQVASMGGPLAEALRSSMTNSSPTSVLHELARGSTSEASYIST 391
>ref|XP_004246560.1| PREDICTED: growth-regulating factor 4-like [Solanum lycopersicum]
Length = 381
Score = 118 bits (296), Expect = 7e-25
Identities = 70/106 (66%), Positives = 83/106 (78%), Gaps = 8/106 (7%)
Frame = -3
Query: 486 WPRQQLQEGDNA-----ATSLSISMPGGGGNPSSDFSLKLSTGNDYDS---VSNIKRSTR 331
WPRQQL+E +NA ATSLSISMPG N SSD SLKLSTG+ ++S V N++RS
Sbjct: 280 WPRQQLEENENATSMASATSLSISMPG---NSSSDVSLKLSTGDRHNSGTGVHNVERSMW 336
Query: 330 GTSHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
G++ QVA MGGPLAEALRSS ++SSPTSVLH L RGSTSEASY++T
Sbjct: 337 GST-QVAPMGGPLAEALRSSMSSSSPTSVLHHLPRGSTSEASYVTT 381
>ref|XP_006341255.1| PREDICTED: growth-regulating factor 3-like [Solanum tuberosum]
Length = 372
Score = 115 bits (287), Expect = 8e-24
Identities = 68/106 (64%), Positives = 81/106 (76%), Gaps = 8/106 (7%)
Frame = -3
Query: 486 WPRQQLQEGDNA-----ATSLSISMPGGGGNPSSDFSLKLSTGNDYDS---VSNIKRSTR 331
WP Q+++E +NA ATSLSISMPG NPSSD SLKLSTG ++S V N++RS
Sbjct: 271 WPIQEVEENENATSMASATSLSISMPG---NPSSDISLKLSTGERHNSGTRVYNVERSMW 327
Query: 330 GTSHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
GT+ QVASM GPLAEALRSS +NSSPTSVL+ L RG+TSEASY+ T
Sbjct: 328 GTN-QVASMSGPLAEALRSSMSNSSPTSVLYHLPRGTTSEASYVGT 372
>gb|EOY08148.1| Growth-regulating factor 3 isoform 2 [Theobroma cacao]
Length = 401
Score = 99.8 bits (247), Expect = 3e-19
Identities = 65/110 (59%), Positives = 74/110 (67%), Gaps = 12/110 (10%)
Frame = -3
Query: 486 WPRQQLQEGDNAATS---------LSISMPGGGGNPSSDFSLKLSTGN-DYDSVSNIKRS 337
WPR Q Q+ DN TS LSISMPG N SSD SLKLSTGN D + +R+
Sbjct: 296 WPRSQ-QDPDNTGTSASPMSSATCLSISMPG---NSSSDVSLKLSTGNVDQLGPRDSERN 351
Query: 336 TRG--TSHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
++QVASMGGPLAEALRSST+NSSPTSVL QL RGS SE SY++T
Sbjct: 352 WAAGWATNQVASMGGPLAEALRSSTSNSSPTSVLQQLPRGSASETSYVNT 401
>gb|EOY08147.1| Growth-regulating factor 3 isoform 1 [Theobroma cacao]
Length = 397
Score = 99.8 bits (247), Expect = 3e-19
Identities = 65/110 (59%), Positives = 74/110 (67%), Gaps = 12/110 (10%)
Frame = -3
Query: 486 WPRQQLQEGDNAATS---------LSISMPGGGGNPSSDFSLKLSTGN-DYDSVSNIKRS 337
WPR Q Q+ DN TS LSISMPG N SSD SLKLSTGN D + +R+
Sbjct: 292 WPRSQ-QDPDNTGTSASPMSSATCLSISMPG---NSSSDVSLKLSTGNVDQLGPRDSERN 347
Query: 336 TRG--TSHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
++QVASMGGPLAEALRSST+NSSPTSVL QL RGS SE SY++T
Sbjct: 348 WAAGWATNQVASMGGPLAEALRSSTSNSSPTSVLQQLPRGSASETSYVNT 397
>ref|XP_004494150.1| PREDICTED: growth-regulating factor 3-like [Cicer arietinum]
Length = 390
Score = 98.2 bits (243), Expect = 1e-18
Identities = 67/121 (55%), Positives = 72/121 (59%), Gaps = 23/121 (19%)
Frame = -3
Query: 486 WPRQQLQEGDNA------ATSLSISMPGGGGNPSSDFSLKLSTG---------------N 370
WPR LQE DNA +T LSISMPG SSD SLKLSTG N
Sbjct: 271 WPRS-LQESDNAENNVGSSTCLSISMPGNNNTSSSDVSLKLSTGYGEEPCPRNENVGLEN 329
Query: 369 DYDSVS-NIKRSTRGTSHQVASMGGPLAEALRSST-TNSSPTSVLHQLARGSTSEASYIS 196
D + N T++QVASMGGPLAEA RSST T+SSPTSVLHQL R S SE SYIS
Sbjct: 330 DNQQLQLNWAGGWNSTNNQVASMGGPLAEAFRSSTSTSSSPTSVLHQLPRSSGSETSYIS 389
Query: 195 T 193
T
Sbjct: 390 T 390
>ref|XP_003553589.1| PREDICTED: growth-regulating factor 3-like [Glycine max]
Length = 388
Score = 94.4 bits (233), Expect = 1e-17
Identities = 63/116 (54%), Positives = 70/116 (60%), Gaps = 18/116 (15%)
Frame = -3
Query: 486 WPRQQLQEGDN-----AATSLSISMPGGGGNPSSDFSLKLSTGNDYDS----------VS 352
WPR LQ+ DN A SLSISMPG SSD SLKLSTG D
Sbjct: 274 WPRS-LQDSDNVENNAAGPSLSISMPGNAAAASSDVSLKLSTGYGEDPGPRNENVGLVAE 332
Query: 351 NIKRSTRG---TSHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
++ + G +S+QVASMGGPLAEALRSS + SSPTSVLH L RGS SE S IST
Sbjct: 333 QLQLNWAGGWASSNQVASMGGPLAEALRSSISTSSPTSVLHHLPRGSGSETSIIST 388
>ref|XP_002534110.1| conserved hypothetical protein [Ricinus communis]
gi|223525833|gb|EEF28270.1| conserved hypothetical
protein [Ricinus communis]
Length = 428
Score = 94.0 bits (232), Expect = 2e-17
Identities = 63/119 (52%), Positives = 72/119 (60%), Gaps = 21/119 (17%)
Frame = -3
Query: 486 WPRQQLQEGDN---------AATSLSISMPGGGGNPSSDFSLKLSTGNDYDSVSNIKRST 334
WPR LQE DN +AT LSISM GN SSD SLKLSTGN + + R +
Sbjct: 316 WPRS-LQEPDNTASNASPMNSATCLSISM---SGNSSSDVSLKLSTGNGEEPAGS--RGS 369
Query: 333 RGTSH------------QVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
H Q++ MGGPLAEALRSST+NSSPTSVLHQL +GSTSE Y+ST
Sbjct: 370 EREHHPQVNWTGGWGTNQMSPMGGPLAEALRSSTSNSSPTSVLHQLPQGSTSETIYVST 428
>ref|XP_006430277.1| hypothetical protein CICLE_v10011856mg [Citrus clementina]
gi|557532334|gb|ESR43517.1| hypothetical protein
CICLE_v10011856mg [Citrus clementina]
Length = 412
Score = 93.2 bits (230), Expect = 3e-17
Identities = 59/98 (60%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
Frame = -3
Query: 456 NAATSLSISMPGGGGNPSSDFSLKLSTGNDYDSVSN--------IKRSTRGTSHQVASMG 301
N+AT LSISMPG SSD SLKLSTGN + S + + +H VASMG
Sbjct: 317 NSATCLSISMPGNSS--SSDVSLKLSTGNIDEPGSQGGGREEPQLNWAAGWATHTVASMG 374
Query: 300 GPLAEALRSSTTNS--SPTSVLHQLARGSTSEASYIST 193
GPLAEALRSST+NS SPTSVLHQL R S SEASY+ST
Sbjct: 375 GPLAEALRSSTSNSNSSPTSVLHQLPRSSASEASYVST 412
>ref|XP_006481829.1| PREDICTED: growth-regulating factor 3-like [Citrus sinensis]
Length = 407
Score = 91.7 bits (226), Expect = 9e-17
Identities = 59/98 (60%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
Frame = -3
Query: 456 NAATSLSISMPGGGGNPSSDFSLKLSTGNDYDSVSN--------IKRSTRGTSHQVASMG 301
N+AT LSISMPG SSD SLKLSTGN + S + + +H VASMG
Sbjct: 312 NSATCLSISMPGNLS--SSDVSLKLSTGNIDEPGSQGGEREEPQLNWAAGWATHTVASMG 369
Query: 300 GPLAEALRSSTTNS--SPTSVLHQLARGSTSEASYIST 193
GPLAEALRSST+NS SPTSVLHQL R S SEASY+ST
Sbjct: 370 GPLAEALRSSTSNSNSSPTSVLHQLPRSSASEASYVST 407
>gb|ADL36702.1| GRF domain class transcription factor [Malus domestica]
Length = 394
Score = 90.5 bits (223), Expect = 2e-16
Identities = 64/118 (54%), Positives = 73/118 (61%), Gaps = 20/118 (16%)
Frame = -3
Query: 486 WPRQQLQEGDNA---------ATSLSISMPGGGGNPSSDFSLKLSTGNDYDSVSNIKRST 334
WP + LQE DNA ATSLSIS+ G SSD SLKLSTGN + +
Sbjct: 281 WPGK-LQELDNARSNASSMNSATSLSISIRG---TTSSDVSLKLSTGNGVEPGHQDSHAE 336
Query: 333 RGTSH----------QVASMGGPLAEALRSST-TNSSPTSVLHQLARGSTSEASYIST 193
RG H Q+ASMGGPLAEALRSS+ +NSSPTSVLH+L R S SEAS+IST
Sbjct: 337 RGQPHLNWPAGWATNQMASMGGPLAEALRSSSNSNSSPTSVLHRLPRASASEASFIST 394
>ref|XP_002277233.2| PREDICTED: uncharacterized protein LOC100249368 [Vitis vinifera]
Length = 394
Score = 89.4 bits (220), Expect = 5e-16
Identities = 57/116 (49%), Positives = 68/116 (58%), Gaps = 18/116 (15%)
Frame = -3
Query: 486 WPRQQLQEGDNAATSLSISMPGGG--------GNPSSDFSLKLSTGN-DYDSVSNIKRST 334
WPR +QE DNAA + S G+ SSD SLKLSTGN D S ++
Sbjct: 280 WPRS-IQEPDNAANGSNNSQATSSTYLSMSILGHHSSDVSLKLSTGNGDEQSPQDVNAER 338
Query: 333 RGT---------SHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
+HQ A MGGPLAEALRS+T+NSSPTSVLHQL RG+ S+ SY+ST
Sbjct: 339 ERPQLNWAAGWGTHQSAQMGGPLAEALRSATSNSSPTSVLHQLPRGTASDTSYVST 394
>emb|CAN66216.1| hypothetical protein VITISV_041165 [Vitis vinifera]
Length = 437
Score = 89.4 bits (220), Expect = 5e-16
Identities = 57/116 (49%), Positives = 68/116 (58%), Gaps = 18/116 (15%)
Frame = -3
Query: 486 WPRQQLQEGDNAATSLSISMPGGG--------GNPSSDFSLKLSTGN-DYDSVSNIKRST 334
WPR +QE DNAA + S G+ SSD SLKLSTGN D S ++
Sbjct: 323 WPRS-IQEPDNAANGSNNSQATSSTYLSMSILGHHSSDVSLKLSTGNGDEQSPQDVNAER 381
Query: 333 RGT---------SHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
+HQ A MGGPLAEALRS+T+NSSPTSVLHQL RG+ S+ SY+ST
Sbjct: 382 ERPQLNWAAGWGTHQSAQMGGPLAEALRSATSNSSPTSVLHQLPRGTASDTSYVST 437
>gb|AFK43856.1| unknown [Medicago truncatula]
Length = 383
Score = 88.2 bits (217), Expect = 1e-15
Identities = 61/124 (49%), Positives = 74/124 (59%), Gaps = 26/124 (20%)
Frame = -3
Query: 486 WPRQQLQEGDNA-------ATSLSISMPGGGG-NPSSDFSLKLSTG--------NDYDSV 355
WPR LQ+ DNA +T LSISMPG + SSD SLKLSTG N+ +
Sbjct: 261 WPRS-LQDSDNAENNGGSSSTCLSISMPGNNNTSSSSDVSLKLSTGYGEEPCPRNENVGL 319
Query: 354 SNIKRSTR----------GTSHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEAS 205
++ + + +QV+SMGGPLAEALRSST+ SSPTSVLHQL R S S+ S
Sbjct: 320 VQTEQQQQQLQLNWIGGWNSGNQVSSMGGPLAEALRSSTSTSSPTSVLHQLPRCSGSQTS 379
Query: 204 YIST 193
YIST
Sbjct: 380 YIST 383
>ref|XP_003625769.1| GRL3 [Medicago truncatula] gi|355500784|gb|AES81987.1| GRL3
[Medicago truncatula]
Length = 384
Score = 87.8 bits (216), Expect = 1e-15
Identities = 61/125 (48%), Positives = 74/125 (59%), Gaps = 27/125 (21%)
Frame = -3
Query: 486 WPRQQLQEGDNA-------ATSLSISMPGGGG--NPSSDFSLKLSTG--------NDYDS 358
WPR LQ+ DNA +T LSISMPG + SSD SLKLSTG N+
Sbjct: 261 WPRS-LQDSDNAENNGGSSSTCLSISMPGNNNTSSSSSDVSLKLSTGYGEEPCPRNENVG 319
Query: 357 VSNIKRSTR----------GTSHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEA 208
+ ++ + + +QV+SMGGPLAEALRSST+ SSPTSVLHQL R S S+
Sbjct: 320 LVQTEQQQQQLQLNWIGGWNSGNQVSSMGGPLAEALRSSTSTSSPTSVLHQLPRCSGSQT 379
Query: 207 SYIST 193
SYIST
Sbjct: 380 SYIST 384
>gb|ESW34859.1| hypothetical protein PHAVU_001G187500g [Phaseolus vulgaris]
Length = 386
Score = 86.7 bits (213), Expect = 3e-15
Identities = 60/119 (50%), Positives = 70/119 (58%), Gaps = 22/119 (18%)
Frame = -3
Query: 486 WPRQQLQEGDN---------AATSLSISMPGGGGNPSSDFSLKLSTGNDYD--------- 361
WPR L++ DN +AT LSISMPG + SSD SLKLSTG D
Sbjct: 269 WPRS-LEDSDNVENNAGRMNSATCLSISMPGNASS-SSDVSLKLSTGYGEDPGPRNENLN 326
Query: 360 -SVSNIKRSTRG---TSHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIS 196
++ + G + QVASMGGPLAEALRSST+ SSPTSVLH L GS SE S+IS
Sbjct: 327 LEAEQLQLNWAGGWASGSQVASMGGPLAEALRSSTSTSSPTSVLHHLPPGSGSETSFIS 385
>gb|EMJ03316.1| hypothetical protein PRUPE_ppa006912mg [Prunus persica]
Length = 390
Score = 86.7 bits (213), Expect = 3e-15
Identities = 63/118 (53%), Positives = 74/118 (62%), Gaps = 20/118 (16%)
Frame = -3
Query: 486 WPRQQLQEGDNA---------ATSLSISMPGGGGNPSSDFSLKLSTGNDYDSVSNIKRST 334
WP + LQE DNA ATSLSIS+ G N SSD SLKLSTGN ++ +
Sbjct: 277 WPGK-LQELDNARTNAGSMNSATSLSISIRG---NSSSDVSLKLSTGNGVETGRLDGHAE 332
Query: 333 RGT----------SHQVASMGGPLAEALRSST-TNSSPTSVLHQLARGSTSEASYIST 193
R ++Q+ASMGGPLAEALRSS+ +NSSPTSVLHQL R S SE S+IST
Sbjct: 333 REQPQLNWPAGWGTNQMASMGGPLAEALRSSSNSNSSPTSVLHQLPRSSASETSFIST 390
>ref|XP_002881441.1| hypothetical protein ARALYDRAFT_482616 [Arabidopsis lyrata subsp.
lyrata] gi|297327280|gb|EFH57700.1| hypothetical protein
ARALYDRAFT_482616 [Arabidopsis lyrata subsp. lyrata]
Length = 396
Score = 85.1 bits (209), Expect = 9e-15
Identities = 56/100 (56%), Positives = 64/100 (64%), Gaps = 15/100 (15%)
Frame = -3
Query: 486 WPRQQLQEGDNA------ATSLSISMPGGGGNPSSDFSLKLSTGNDYDSVSNIKR----- 340
WPR LQE DN+ AT LSISMPG N SSD SLKLSTGN+ ++ SN
Sbjct: 293 WPRSSLQEADNSSSPMSSATCLSISMPG---NSSSDVSLKLSTGNEEEARSNNNGRDQQN 349
Query: 339 ----STRGTSHQVASMGGPLAEALRSSTTNSSPTSVLHQL 232
S G++H MGGPLAEALRSS ++SSPTSVLHQL
Sbjct: 350 MSWWSGGGSNHHHHHMGGPLAEALRSS-SSSSPTSVLHQL 388
>dbj|BAC42083.1| unknown protein [Arabidopsis thaliana]
Length = 398
Score = 84.7 bits (208), Expect = 1e-14
Identities = 56/100 (56%), Positives = 64/100 (64%), Gaps = 15/100 (15%)
Frame = -3
Query: 486 WPRQQLQEGDNA------ATSLSISMPGGGGNPSSDFSLKLSTGNDYDSVSNIKR----- 340
WPR LQE DN+ AT LSISMPG N SSD SLKLSTGN+ + SN
Sbjct: 295 WPRSSLQEADNSSSPMSSATCLSISMPG---NSSSDVSLKLSTGNEEGARSNNNGRDQQN 351
Query: 339 ----STRGTSHQVASMGGPLAEALRSSTTNSSPTSVLHQL 232
S G++H +MGGPLAEALRSS ++SSPTSVLHQL
Sbjct: 352 MSWWSGGGSNHHHHNMGGPLAEALRSS-SSSSPTSVLHQL 390