BLASTX nr result

ID: Atropa21_contig00028652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00028652
         (488 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004249453.1| PREDICTED: growth-regulating factor 2-like [...   169   5e-40
ref|XP_006339314.1| PREDICTED: growth-regulating factor 3-like [...   165   5e-39
ref|XP_004246560.1| PREDICTED: growth-regulating factor 4-like [...   118   7e-25
ref|XP_006341255.1| PREDICTED: growth-regulating factor 3-like [...   115   8e-24
gb|EOY08148.1| Growth-regulating factor 3 isoform 2 [Theobroma c...   100   3e-19
gb|EOY08147.1| Growth-regulating factor 3 isoform 1 [Theobroma c...   100   3e-19
ref|XP_004494150.1| PREDICTED: growth-regulating factor 3-like [...    98   1e-18
ref|XP_003553589.1| PREDICTED: growth-regulating factor 3-like [...    94   1e-17
ref|XP_002534110.1| conserved hypothetical protein [Ricinus comm...    94   2e-17
ref|XP_006430277.1| hypothetical protein CICLE_v10011856mg [Citr...    93   3e-17
ref|XP_006481829.1| PREDICTED: growth-regulating factor 3-like [...    92   9e-17
gb|ADL36702.1| GRF domain class transcription factor [Malus dome...    91   2e-16
ref|XP_002277233.2| PREDICTED: uncharacterized protein LOC100249...    89   5e-16
emb|CAN66216.1| hypothetical protein VITISV_041165 [Vitis vinifera]    89   5e-16
gb|AFK43856.1| unknown [Medicago truncatula]                           88   1e-15
ref|XP_003625769.1| GRL3 [Medicago truncatula] gi|355500784|gb|A...    88   1e-15
gb|ESW34859.1| hypothetical protein PHAVU_001G187500g [Phaseolus...    87   3e-15
gb|EMJ03316.1| hypothetical protein PRUPE_ppa006912mg [Prunus pe...    87   3e-15
ref|XP_002881441.1| hypothetical protein ARALYDRAFT_482616 [Arab...    85   9e-15
dbj|BAC42083.1| unknown protein [Arabidopsis thaliana]                 85   1e-14

>ref|XP_004249453.1| PREDICTED: growth-regulating factor 2-like [Solanum lycopersicum]
          Length = 389

 Score =  169 bits (427), Expect = 5e-40
 Identities = 91/102 (89%), Positives = 93/102 (91%), Gaps = 4/102 (3%)
 Frame = -3

Query: 486 WPRQQLQEGDNAATSLSISMPGGGGNPSSDFSLKLSTGNDYDS---VSNIKRSTRGTS-H 319
           WPRQQLQEGDNAATSLSISMPG GGNPSSDFSLKLSTGN YDS   VSN++RST GTS H
Sbjct: 288 WPRQQLQEGDNAATSLSISMPGVGGNPSSDFSLKLSTGNYYDSGTQVSNVERSTWGTSHH 347

Query: 318 QVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
            VASMGGPLAEALRSSTTNSSPTSVLHQLARGS SEASYIST
Sbjct: 348 HVASMGGPLAEALRSSTTNSSPTSVLHQLARGSASEASYIST 389


>ref|XP_006339314.1| PREDICTED: growth-regulating factor 3-like [Solanum tuberosum]
          Length = 391

 Score =  165 bits (418), Expect = 5e-39
 Identities = 90/103 (87%), Positives = 94/103 (91%), Gaps = 5/103 (4%)
 Frame = -3

Query: 486 WPRQQ-LQEGDNAATSLSISMPGGGGNPSSDFSLKLSTGNDYD---SVSNIKRSTRGTSH 319
           WPRQQ LQEGDNAATSLSISMPGGGGN SSDFSLKLSTGNDYD    VSN+++ST GTSH
Sbjct: 289 WPRQQQLQEGDNAATSLSISMPGGGGNTSSDFSLKLSTGNDYDLGTQVSNVEQSTWGTSH 348

Query: 318 -QVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
            QVASMGGPLAEALRSS TNSSPTSVLH+LARGSTSEASYIST
Sbjct: 349 HQVASMGGPLAEALRSSMTNSSPTSVLHELARGSTSEASYIST 391


>ref|XP_004246560.1| PREDICTED: growth-regulating factor 4-like [Solanum lycopersicum]
          Length = 381

 Score =  118 bits (296), Expect = 7e-25
 Identities = 70/106 (66%), Positives = 83/106 (78%), Gaps = 8/106 (7%)
 Frame = -3

Query: 486 WPRQQLQEGDNA-----ATSLSISMPGGGGNPSSDFSLKLSTGNDYDS---VSNIKRSTR 331
           WPRQQL+E +NA     ATSLSISMPG   N SSD SLKLSTG+ ++S   V N++RS  
Sbjct: 280 WPRQQLEENENATSMASATSLSISMPG---NSSSDVSLKLSTGDRHNSGTGVHNVERSMW 336

Query: 330 GTSHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
           G++ QVA MGGPLAEALRSS ++SSPTSVLH L RGSTSEASY++T
Sbjct: 337 GST-QVAPMGGPLAEALRSSMSSSSPTSVLHHLPRGSTSEASYVTT 381


>ref|XP_006341255.1| PREDICTED: growth-regulating factor 3-like [Solanum tuberosum]
          Length = 372

 Score =  115 bits (287), Expect = 8e-24
 Identities = 68/106 (64%), Positives = 81/106 (76%), Gaps = 8/106 (7%)
 Frame = -3

Query: 486 WPRQQLQEGDNA-----ATSLSISMPGGGGNPSSDFSLKLSTGNDYDS---VSNIKRSTR 331
           WP Q+++E +NA     ATSLSISMPG   NPSSD SLKLSTG  ++S   V N++RS  
Sbjct: 271 WPIQEVEENENATSMASATSLSISMPG---NPSSDISLKLSTGERHNSGTRVYNVERSMW 327

Query: 330 GTSHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
           GT+ QVASM GPLAEALRSS +NSSPTSVL+ L RG+TSEASY+ T
Sbjct: 328 GTN-QVASMSGPLAEALRSSMSNSSPTSVLYHLPRGTTSEASYVGT 372


>gb|EOY08148.1| Growth-regulating factor 3 isoform 2 [Theobroma cacao]
          Length = 401

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 65/110 (59%), Positives = 74/110 (67%), Gaps = 12/110 (10%)
 Frame = -3

Query: 486 WPRQQLQEGDNAATS---------LSISMPGGGGNPSSDFSLKLSTGN-DYDSVSNIKRS 337
           WPR Q Q+ DN  TS         LSISMPG   N SSD SLKLSTGN D     + +R+
Sbjct: 296 WPRSQ-QDPDNTGTSASPMSSATCLSISMPG---NSSSDVSLKLSTGNVDQLGPRDSERN 351

Query: 336 TRG--TSHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
                 ++QVASMGGPLAEALRSST+NSSPTSVL QL RGS SE SY++T
Sbjct: 352 WAAGWATNQVASMGGPLAEALRSSTSNSSPTSVLQQLPRGSASETSYVNT 401


>gb|EOY08147.1| Growth-regulating factor 3 isoform 1 [Theobroma cacao]
          Length = 397

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 65/110 (59%), Positives = 74/110 (67%), Gaps = 12/110 (10%)
 Frame = -3

Query: 486 WPRQQLQEGDNAATS---------LSISMPGGGGNPSSDFSLKLSTGN-DYDSVSNIKRS 337
           WPR Q Q+ DN  TS         LSISMPG   N SSD SLKLSTGN D     + +R+
Sbjct: 292 WPRSQ-QDPDNTGTSASPMSSATCLSISMPG---NSSSDVSLKLSTGNVDQLGPRDSERN 347

Query: 336 TRG--TSHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
                 ++QVASMGGPLAEALRSST+NSSPTSVL QL RGS SE SY++T
Sbjct: 348 WAAGWATNQVASMGGPLAEALRSSTSNSSPTSVLQQLPRGSASETSYVNT 397


>ref|XP_004494150.1| PREDICTED: growth-regulating factor 3-like [Cicer arietinum]
          Length = 390

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 67/121 (55%), Positives = 72/121 (59%), Gaps = 23/121 (19%)
 Frame = -3

Query: 486 WPRQQLQEGDNA------ATSLSISMPGGGGNPSSDFSLKLSTG---------------N 370
           WPR  LQE DNA      +T LSISMPG     SSD SLKLSTG               N
Sbjct: 271 WPRS-LQESDNAENNVGSSTCLSISMPGNNNTSSSDVSLKLSTGYGEEPCPRNENVGLEN 329

Query: 369 DYDSVS-NIKRSTRGTSHQVASMGGPLAEALRSST-TNSSPTSVLHQLARGSTSEASYIS 196
           D   +  N       T++QVASMGGPLAEA RSST T+SSPTSVLHQL R S SE SYIS
Sbjct: 330 DNQQLQLNWAGGWNSTNNQVASMGGPLAEAFRSSTSTSSSPTSVLHQLPRSSGSETSYIS 389

Query: 195 T 193
           T
Sbjct: 390 T 390


>ref|XP_003553589.1| PREDICTED: growth-regulating factor 3-like [Glycine max]
          Length = 388

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 63/116 (54%), Positives = 70/116 (60%), Gaps = 18/116 (15%)
 Frame = -3

Query: 486 WPRQQLQEGDN-----AATSLSISMPGGGGNPSSDFSLKLSTGNDYDS----------VS 352
           WPR  LQ+ DN     A  SLSISMPG     SSD SLKLSTG   D             
Sbjct: 274 WPRS-LQDSDNVENNAAGPSLSISMPGNAAAASSDVSLKLSTGYGEDPGPRNENVGLVAE 332

Query: 351 NIKRSTRG---TSHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
            ++ +  G   +S+QVASMGGPLAEALRSS + SSPTSVLH L RGS SE S IST
Sbjct: 333 QLQLNWAGGWASSNQVASMGGPLAEALRSSISTSSPTSVLHHLPRGSGSETSIIST 388


>ref|XP_002534110.1| conserved hypothetical protein [Ricinus communis]
           gi|223525833|gb|EEF28270.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 428

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 63/119 (52%), Positives = 72/119 (60%), Gaps = 21/119 (17%)
 Frame = -3

Query: 486 WPRQQLQEGDN---------AATSLSISMPGGGGNPSSDFSLKLSTGNDYDSVSNIKRST 334
           WPR  LQE DN         +AT LSISM    GN SSD SLKLSTGN  +   +  R +
Sbjct: 316 WPRS-LQEPDNTASNASPMNSATCLSISM---SGNSSSDVSLKLSTGNGEEPAGS--RGS 369

Query: 333 RGTSH------------QVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
               H            Q++ MGGPLAEALRSST+NSSPTSVLHQL +GSTSE  Y+ST
Sbjct: 370 EREHHPQVNWTGGWGTNQMSPMGGPLAEALRSSTSNSSPTSVLHQLPQGSTSETIYVST 428


>ref|XP_006430277.1| hypothetical protein CICLE_v10011856mg [Citrus clementina]
           gi|557532334|gb|ESR43517.1| hypothetical protein
           CICLE_v10011856mg [Citrus clementina]
          Length = 412

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 59/98 (60%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
 Frame = -3

Query: 456 NAATSLSISMPGGGGNPSSDFSLKLSTGNDYDSVSN--------IKRSTRGTSHQVASMG 301
           N+AT LSISMPG     SSD SLKLSTGN  +  S         +  +    +H VASMG
Sbjct: 317 NSATCLSISMPGNSS--SSDVSLKLSTGNIDEPGSQGGGREEPQLNWAAGWATHTVASMG 374

Query: 300 GPLAEALRSSTTNS--SPTSVLHQLARGSTSEASYIST 193
           GPLAEALRSST+NS  SPTSVLHQL R S SEASY+ST
Sbjct: 375 GPLAEALRSSTSNSNSSPTSVLHQLPRSSASEASYVST 412


>ref|XP_006481829.1| PREDICTED: growth-regulating factor 3-like [Citrus sinensis]
          Length = 407

 Score = 91.7 bits (226), Expect = 9e-17
 Identities = 59/98 (60%), Positives = 66/98 (67%), Gaps = 10/98 (10%)
 Frame = -3

Query: 456 NAATSLSISMPGGGGNPSSDFSLKLSTGNDYDSVSN--------IKRSTRGTSHQVASMG 301
           N+AT LSISMPG     SSD SLKLSTGN  +  S         +  +    +H VASMG
Sbjct: 312 NSATCLSISMPGNLS--SSDVSLKLSTGNIDEPGSQGGEREEPQLNWAAGWATHTVASMG 369

Query: 300 GPLAEALRSSTTNS--SPTSVLHQLARGSTSEASYIST 193
           GPLAEALRSST+NS  SPTSVLHQL R S SEASY+ST
Sbjct: 370 GPLAEALRSSTSNSNSSPTSVLHQLPRSSASEASYVST 407


>gb|ADL36702.1| GRF domain class transcription factor [Malus domestica]
          Length = 394

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 64/118 (54%), Positives = 73/118 (61%), Gaps = 20/118 (16%)
 Frame = -3

Query: 486 WPRQQLQEGDNA---------ATSLSISMPGGGGNPSSDFSLKLSTGNDYDSVSNIKRST 334
           WP + LQE DNA         ATSLSIS+ G     SSD SLKLSTGN  +       + 
Sbjct: 281 WPGK-LQELDNARSNASSMNSATSLSISIRG---TTSSDVSLKLSTGNGVEPGHQDSHAE 336

Query: 333 RGTSH----------QVASMGGPLAEALRSST-TNSSPTSVLHQLARGSTSEASYIST 193
           RG  H          Q+ASMGGPLAEALRSS+ +NSSPTSVLH+L R S SEAS+IST
Sbjct: 337 RGQPHLNWPAGWATNQMASMGGPLAEALRSSSNSNSSPTSVLHRLPRASASEASFIST 394


>ref|XP_002277233.2| PREDICTED: uncharacterized protein LOC100249368 [Vitis vinifera]
          Length = 394

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 57/116 (49%), Positives = 68/116 (58%), Gaps = 18/116 (15%)
 Frame = -3

Query: 486 WPRQQLQEGDNAATSLSISMPGGG--------GNPSSDFSLKLSTGN-DYDSVSNIKRST 334
           WPR  +QE DNAA   + S             G+ SSD SLKLSTGN D  S  ++    
Sbjct: 280 WPRS-IQEPDNAANGSNNSQATSSTYLSMSILGHHSSDVSLKLSTGNGDEQSPQDVNAER 338

Query: 333 RGT---------SHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
                       +HQ A MGGPLAEALRS+T+NSSPTSVLHQL RG+ S+ SY+ST
Sbjct: 339 ERPQLNWAAGWGTHQSAQMGGPLAEALRSATSNSSPTSVLHQLPRGTASDTSYVST 394


>emb|CAN66216.1| hypothetical protein VITISV_041165 [Vitis vinifera]
          Length = 437

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 57/116 (49%), Positives = 68/116 (58%), Gaps = 18/116 (15%)
 Frame = -3

Query: 486 WPRQQLQEGDNAATSLSISMPGGG--------GNPSSDFSLKLSTGN-DYDSVSNIKRST 334
           WPR  +QE DNAA   + S             G+ SSD SLKLSTGN D  S  ++    
Sbjct: 323 WPRS-IQEPDNAANGSNNSQATSSTYLSMSILGHHSSDVSLKLSTGNGDEQSPQDVNAER 381

Query: 333 RGT---------SHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIST 193
                       +HQ A MGGPLAEALRS+T+NSSPTSVLHQL RG+ S+ SY+ST
Sbjct: 382 ERPQLNWAAGWGTHQSAQMGGPLAEALRSATSNSSPTSVLHQLPRGTASDTSYVST 437


>gb|AFK43856.1| unknown [Medicago truncatula]
          Length = 383

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 61/124 (49%), Positives = 74/124 (59%), Gaps = 26/124 (20%)
 Frame = -3

Query: 486 WPRQQLQEGDNA-------ATSLSISMPGGGG-NPSSDFSLKLSTG--------NDYDSV 355
           WPR  LQ+ DNA       +T LSISMPG    + SSD SLKLSTG        N+   +
Sbjct: 261 WPRS-LQDSDNAENNGGSSSTCLSISMPGNNNTSSSSDVSLKLSTGYGEEPCPRNENVGL 319

Query: 354 SNIKRSTR----------GTSHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEAS 205
              ++  +           + +QV+SMGGPLAEALRSST+ SSPTSVLHQL R S S+ S
Sbjct: 320 VQTEQQQQQLQLNWIGGWNSGNQVSSMGGPLAEALRSSTSTSSPTSVLHQLPRCSGSQTS 379

Query: 204 YIST 193
           YIST
Sbjct: 380 YIST 383


>ref|XP_003625769.1| GRL3 [Medicago truncatula] gi|355500784|gb|AES81987.1| GRL3
           [Medicago truncatula]
          Length = 384

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 61/125 (48%), Positives = 74/125 (59%), Gaps = 27/125 (21%)
 Frame = -3

Query: 486 WPRQQLQEGDNA-------ATSLSISMPGGGG--NPSSDFSLKLSTG--------NDYDS 358
           WPR  LQ+ DNA       +T LSISMPG     + SSD SLKLSTG        N+   
Sbjct: 261 WPRS-LQDSDNAENNGGSSSTCLSISMPGNNNTSSSSSDVSLKLSTGYGEEPCPRNENVG 319

Query: 357 VSNIKRSTR----------GTSHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEA 208
           +   ++  +           + +QV+SMGGPLAEALRSST+ SSPTSVLHQL R S S+ 
Sbjct: 320 LVQTEQQQQQLQLNWIGGWNSGNQVSSMGGPLAEALRSSTSTSSPTSVLHQLPRCSGSQT 379

Query: 207 SYIST 193
           SYIST
Sbjct: 380 SYIST 384


>gb|ESW34859.1| hypothetical protein PHAVU_001G187500g [Phaseolus vulgaris]
          Length = 386

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 60/119 (50%), Positives = 70/119 (58%), Gaps = 22/119 (18%)
 Frame = -3

Query: 486 WPRQQLQEGDN---------AATSLSISMPGGGGNPSSDFSLKLSTGNDYD--------- 361
           WPR  L++ DN         +AT LSISMPG   + SSD SLKLSTG   D         
Sbjct: 269 WPRS-LEDSDNVENNAGRMNSATCLSISMPGNASS-SSDVSLKLSTGYGEDPGPRNENLN 326

Query: 360 -SVSNIKRSTRG---TSHQVASMGGPLAEALRSSTTNSSPTSVLHQLARGSTSEASYIS 196
                ++ +  G   +  QVASMGGPLAEALRSST+ SSPTSVLH L  GS SE S+IS
Sbjct: 327 LEAEQLQLNWAGGWASGSQVASMGGPLAEALRSSTSTSSPTSVLHHLPPGSGSETSFIS 385


>gb|EMJ03316.1| hypothetical protein PRUPE_ppa006912mg [Prunus persica]
          Length = 390

 Score = 86.7 bits (213), Expect = 3e-15
 Identities = 63/118 (53%), Positives = 74/118 (62%), Gaps = 20/118 (16%)
 Frame = -3

Query: 486 WPRQQLQEGDNA---------ATSLSISMPGGGGNPSSDFSLKLSTGNDYDSVSNIKRST 334
           WP + LQE DNA         ATSLSIS+ G   N SSD SLKLSTGN  ++      + 
Sbjct: 277 WPGK-LQELDNARTNAGSMNSATSLSISIRG---NSSSDVSLKLSTGNGVETGRLDGHAE 332

Query: 333 RGT----------SHQVASMGGPLAEALRSST-TNSSPTSVLHQLARGSTSEASYIST 193
           R            ++Q+ASMGGPLAEALRSS+ +NSSPTSVLHQL R S SE S+IST
Sbjct: 333 REQPQLNWPAGWGTNQMASMGGPLAEALRSSSNSNSSPTSVLHQLPRSSASETSFIST 390


>ref|XP_002881441.1| hypothetical protein ARALYDRAFT_482616 [Arabidopsis lyrata subsp.
           lyrata] gi|297327280|gb|EFH57700.1| hypothetical protein
           ARALYDRAFT_482616 [Arabidopsis lyrata subsp. lyrata]
          Length = 396

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 56/100 (56%), Positives = 64/100 (64%), Gaps = 15/100 (15%)
 Frame = -3

Query: 486 WPRQQLQEGDNA------ATSLSISMPGGGGNPSSDFSLKLSTGNDYDSVSNIKR----- 340
           WPR  LQE DN+      AT LSISMPG   N SSD SLKLSTGN+ ++ SN        
Sbjct: 293 WPRSSLQEADNSSSPMSSATCLSISMPG---NSSSDVSLKLSTGNEEEARSNNNGRDQQN 349

Query: 339 ----STRGTSHQVASMGGPLAEALRSSTTNSSPTSVLHQL 232
               S  G++H    MGGPLAEALRSS ++SSPTSVLHQL
Sbjct: 350 MSWWSGGGSNHHHHHMGGPLAEALRSS-SSSSPTSVLHQL 388


>dbj|BAC42083.1| unknown protein [Arabidopsis thaliana]
          Length = 398

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 56/100 (56%), Positives = 64/100 (64%), Gaps = 15/100 (15%)
 Frame = -3

Query: 486 WPRQQLQEGDNA------ATSLSISMPGGGGNPSSDFSLKLSTGNDYDSVSNIKR----- 340
           WPR  LQE DN+      AT LSISMPG   N SSD SLKLSTGN+  + SN        
Sbjct: 295 WPRSSLQEADNSSSPMSSATCLSISMPG---NSSSDVSLKLSTGNEEGARSNNNGRDQQN 351

Query: 339 ----STRGTSHQVASMGGPLAEALRSSTTNSSPTSVLHQL 232
               S  G++H   +MGGPLAEALRSS ++SSPTSVLHQL
Sbjct: 352 MSWWSGGGSNHHHHNMGGPLAEALRSS-SSSSPTSVLHQL 390


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