BLASTX nr result
ID: Atropa21_contig00028638
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00028638
(494 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 86 5e-15
gb|AAX95226.1| retrotransposon protein, putative, unclassified [... 80 2e-13
gb|ABA91843.2| retrotransposon protein, putative, unclassified [... 80 2e-13
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 80 4e-13
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 80 4e-13
emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group] 79 5e-13
gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group] 79 6e-13
gb|AAG13430.1|AC051634_11 putative plant disease resistance poly... 79 8e-13
gb|AAP54661.2| retrotransposon protein, putative, unclassified [... 79 8e-13
gb|ABF96573.1| retrotransposon protein, putative, unclassified, ... 78 1e-12
gb|AAO37507.1| retrotransposon protein, putative, unclassified [... 78 1e-12
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 77 2e-12
gb|ABF94845.1| retrotransposon protein, putative, unclassified [... 77 2e-12
gb|EMT07282.1| hypothetical protein F775_09518 [Aegilops tauschii] 77 2e-12
ref|NP_001053783.1| Os04g0603800 [Oryza sativa Japonica Group] g... 75 7e-12
emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group] 75 7e-12
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 75 9e-12
gb|ABF98227.1| retrotransposon protein, putative, unclassified [... 74 2e-11
gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group] 74 2e-11
ref|NP_001050226.1| Os03g0377400 [Oryza sativa Japonica Group] g... 72 8e-11
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 85.9 bits (211), Expect = 5e-15
Identities = 42/92 (45%), Positives = 57/92 (61%)
Frame = +3
Query: 177 RLELPAGFQIHPVFHISQLKKRVEPSITPLDQPPICNSHGQVLVQPLALLQRRMVKINNA 356
+L LPA QIHPVFH+SQLKK + P + P P+ + +G +L QP A+L+RR++ NNA
Sbjct: 1218 KLLLPASSQIHPVFHVSQLKKHIGPKVVPEPGLPLTDDNGNILSQPTAVLERRLIPQNNA 1277
Query: 357 MGVKVLVQWINMGADEATLEDWGCLKSQFPDF 452
V+ VQW N+ AT ED + FP F
Sbjct: 1278 PVVQWKVQWANLPLSAATWEDAAFISKVFPAF 1309
>gb|AAX95226.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1513
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/92 (41%), Positives = 54/92 (58%)
Frame = +3
Query: 177 RLELPAGFQIHPVFHISQLKKRVEPSITPLDQPPICNSHGQVLVQPLALLQRRMVKINNA 356
+L+LP IHPVFH+SQLKK + P+ P GQ+ QP+A+LQRRM+ N
Sbjct: 1420 KLQLPEDASIHPVFHVSQLKKHLGQRAVPMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGV 1479
Query: 357 MGVKVLVQWINMGADEATLEDWGCLKSQFPDF 452
+ L+ W N+G +AT ED ++S +P F
Sbjct: 1480 AVTQWLILWENLGPADATWEDAAVIQSMYPTF 1511
>gb|ABA91843.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1411
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/92 (41%), Positives = 54/92 (58%)
Frame = +3
Query: 177 RLELPAGFQIHPVFHISQLKKRVEPSITPLDQPPICNSHGQVLVQPLALLQRRMVKINNA 356
+L+LP IHPVFH+SQLKK + P+ P GQ+ QP+A+LQRRM+ N
Sbjct: 1318 KLQLPEDASIHPVFHVSQLKKHLGQRAVPMSNLPSMGPDGQIKTQPVAVLQRRMIPRNGV 1377
Query: 357 MGVKVLVQWINMGADEATLEDWGCLKSQFPDF 452
+ L+ W N+G +AT ED ++S +P F
Sbjct: 1378 AVTQWLILWENLGPADATWEDAAVIQSMYPTF 1409
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 79.7 bits (195), Expect = 4e-13
Identities = 39/92 (42%), Positives = 54/92 (58%)
Frame = +3
Query: 177 RLELPAGFQIHPVFHISQLKKRVEPSITPLDQPPICNSHGQVLVQPLALLQRRMVKINNA 356
RL+LP IHPVFH+SQLKK + P+ P GQ+ +P+A+LQRRM+ NN
Sbjct: 862 RLQLPEEAAIHPVFHVSQLKKHLGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNV 921
Query: 357 MGVKVLVQWINMGADEATLEDWGCLKSQFPDF 452
+ L+ W N+ EAT ED ++ FP+F
Sbjct: 922 AVTQWLILWSNLTPAEATWEDASYIQKVFPNF 953
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/92 (41%), Positives = 53/92 (57%)
Frame = +3
Query: 177 RLELPAGFQIHPVFHISQLKKRVEPSITPLDQPPICNSHGQVLVQPLALLQRRMVKINNA 356
+L+LP G IHPVFH+SQLKK + P+ P GQ+ +P+A+L+RRM+
Sbjct: 1493 KLQLPEGSNIHPVFHVSQLKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGGV 1552
Query: 357 MGVKVLVQWINMGADEATLEDWGCLKSQFPDF 452
+ LV W N+ EAT ED ++S FP F
Sbjct: 1553 AVTQWLVLWHNLSPSEATWEDASMIQSMFPSF 1584
>emb|CAE04958.2| OSJNBa0070D17.9 [Oryza sativa Japonica Group]
Length = 394
Score = 79.3 bits (194), Expect = 5e-13
Identities = 39/92 (42%), Positives = 53/92 (57%)
Frame = +3
Query: 177 RLELPAGFQIHPVFHISQLKKRVEPSITPLDQPPICNSHGQVLVQPLALLQRRMVKINNA 356
RL+LP IHPVFH+SQLKK + P+ P GQ+ QP A+LQRRM+ N
Sbjct: 301 RLQLPNDATIHPVFHVSQLKKHLGKRAIPMPNLPSVGPEGQIKTQPTAVLQRRMMPRNGV 360
Query: 357 MGVKVLVQWINMGADEATLEDWGCLKSQFPDF 452
+ L+ W N+G +AT ED +++ FP F
Sbjct: 361 AVTQWLILWENLGPTDATWEDADVIRNMFPTF 392
>gb|AAV24812.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1475
Score = 79.0 bits (193), Expect = 6e-13
Identities = 39/92 (42%), Positives = 53/92 (57%)
Frame = +3
Query: 177 RLELPAGFQIHPVFHISQLKKRVEPSITPLDQPPICNSHGQVLVQPLALLQRRMVKINNA 356
+L+LP QIHPVFH+SQLKK + P+ P GQ+ +PLA+LQRRMV
Sbjct: 1382 KLQLPDDAQIHPVFHVSQLKKHLGKHAIPMSNLPSVGPDGQIKTEPLAVLQRRMVPRKGV 1441
Query: 357 MGVKVLVQWINMGADEATLEDWGCLKSQFPDF 452
+ L+ W N+ EAT ED +++ FP F
Sbjct: 1442 AVTQWLILWQNLSPAEATWEDASVIQAMFPSF 1473
>gb|AAG13430.1|AC051634_11 putative plant disease resistance polyprotein [Oryza sativa Japonica
Group]
Length = 921
Score = 78.6 bits (192), Expect = 8e-13
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Frame = +3
Query: 177 RLELPAGFQIHPVFHISQLKKRVE---PSITPLDQPPICNSHGQVLVQPLALLQRRMVKI 347
RL+LPA +HPVFH+SQLK +V P T L P + ++ V P A+L+RR+VK
Sbjct: 805 RLDLPASSTVHPVFHVSQLKAQVPDHTPVYTSLPSPVVLDAADVV---PEAILERRLVKR 861
Query: 348 NNAMGVKVLVQWINMGADEATLEDWGCLKSQFPDFVAQVTHQRP*G 485
NA V+VL++W + AD AT ED+ +K++FPD A + P G
Sbjct: 862 GNAAHVQVLLKWSLLPADHATWEDYHVVKTRFPDAPAWGQAETPAG 907
>gb|AAP54661.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 760
Score = 78.6 bits (192), Expect = 8e-13
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Frame = +3
Query: 177 RLELPAGFQIHPVFHISQLKKRVE---PSITPLDQPPICNSHGQVLVQPLALLQRRMVKI 347
RL+LPA +HPVFH+SQLK +V P T L P + ++ V P A+L+RR+VK
Sbjct: 644 RLDLPASSTVHPVFHVSQLKAQVPDHTPVYTSLPSPVVLDAADVV---PEAILERRLVKR 700
Query: 348 NNAMGVKVLVQWINMGADEATLEDWGCLKSQFPDFVAQVTHQRP*G 485
NA V+VL++W + AD AT ED+ +K++FPD A + P G
Sbjct: 701 GNAAHVQVLLKWSLLPADHATWEDYHVVKTRFPDAPAWGQAETPAG 746
>gb|ABF96573.1| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 1481
Score = 78.2 bits (191), Expect = 1e-12
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Frame = +3
Query: 177 RLELPAGFQIHPVFHISQLKKRVE---PSITPLDQPPICNSHGQVLVQPLALLQRRMVKI 347
RL+LPA +HPVFH+SQLK +V P T L P + ++ V P A+L+RR+VK
Sbjct: 1365 RLDLPASSTVHPVFHVSQLKAQVPDHTPVYTSLPSPVVLDAADVV---PEAILERRLVKR 1421
Query: 348 NNAMGVKVLVQWINMGADEATLEDWGCLKSQFPDFVAQVTHQRP*G 485
NA V+VL++W + AD AT ED+ +K++FPD A + P G
Sbjct: 1422 GNAAHVQVLLKWSLLPADHATWEDYHVVKTRFPDAPAWGQAKTPAG 1467
>gb|AAO37507.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1155
Score = 78.2 bits (191), Expect = 1e-12
Identities = 46/106 (43%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Frame = +3
Query: 177 RLELPAGFQIHPVFHISQLKKRVE---PSITPLDQPPICNSHGQVLVQPLALLQRRMVKI 347
RL+LPA +HPVFH+SQLK +V P T L P + ++ V P A+L+RR+VK
Sbjct: 1039 RLDLPASSTVHPVFHVSQLKAQVPDHTPVYTSLPSPVVLDAADVV---PEAILERRLVKR 1095
Query: 348 NNAMGVKVLVQWINMGADEATLEDWGCLKSQFPDFVAQVTHQRP*G 485
NA V+VL++W + AD AT ED+ +K++FPD A + P G
Sbjct: 1096 GNAAHVQVLLKWSLLPADHATWEDYHVVKTRFPDAPAWGQAKTPAG 1141
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 77.4 bits (189), Expect = 2e-12
Identities = 38/92 (41%), Positives = 55/92 (59%)
Frame = +3
Query: 177 RLELPAGFQIHPVFHISQLKKRVEPSITPLDQPPICNSHGQVLVQPLALLQRRMVKINNA 356
+L+LP G IHPVFH+SQLKK + P+ P GQ+ +P A+LQRRM+ +N
Sbjct: 1518 KLQLPDGAGIHPVFHVSQLKKHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNE 1577
Query: 357 MGVKVLVQWINMGADEATLEDWGCLKSQFPDF 452
+ L+ W N+ EAT ED +++ FP+F
Sbjct: 1578 PVTQWLILWENLTPAEATWEDASYIQAAFPNF 1609
>gb|ABF94845.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 937
Score = 77.4 bits (189), Expect = 2e-12
Identities = 45/106 (42%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Frame = +3
Query: 177 RLELPAGFQIHPVFHISQLKKRVE---PSITPLDQPPICNSHGQVLVQPLALLQRRMVKI 347
RL+LPA +HPVFH+SQLK +V P T L + ++ V P A+L+RR+VK
Sbjct: 821 RLDLPASSTVHPVFHVSQLKAQVPDHTPVYTSLPSQVVLDAADVV---PEAILERRLVKR 877
Query: 348 NNAMGVKVLVQWINMGADEATLEDWGCLKSQFPDFVAQVTHQRP*G 485
+NA V+VL++W ++ AD AT ED+ +K++FPD A + P G
Sbjct: 878 SNAAHVQVLLKWSSLPADHATWEDYHVVKTRFPDAPAWGQAETPAG 923
>gb|EMT07282.1| hypothetical protein F775_09518 [Aegilops tauschii]
Length = 947
Score = 77.0 bits (188), Expect = 2e-12
Identities = 35/95 (36%), Positives = 58/95 (61%)
Frame = +3
Query: 180 LELPAGFQIHPVFHISQLKKRVEPSITPLDQPPICNSHGQVLVQPLALLQRRMVKINNAM 359
L L AG +IHPVFH+S+LK+ + P++ P + P+ G + +P+ +LQ R++ NN
Sbjct: 43 LLLLAGTKIHPVFHVSELKRHIGPTVVPCENLPLITEDGHIKQEPVMVLQMRLIPRNNLP 102
Query: 360 GVKVLVQWINMGADEATLEDWGCLKSQFPDFVAQV 464
++ LVQW N ++++ ED +K FP F Q+
Sbjct: 103 VIQWLVQWENFPPEDSSWEDADFIKHTFPHFFKQM 137
>ref|NP_001053783.1| Os04g0603800 [Oryza sativa Japonica Group]
gi|113565354|dbj|BAF15697.1| Os04g0603800, partial
[Oryza sativa Japonica Group]
Length = 123
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/91 (40%), Positives = 54/91 (59%)
Frame = +3
Query: 180 LELPAGFQIHPVFHISQLKKRVEPSITPLDQPPICNSHGQVLVQPLALLQRRMVKINNAM 359
L+LP IHPVFH+SQLKK V + PL P+ + G + +P+A+L RR+V N
Sbjct: 31 LQLPEEAGIHPVFHVSQLKKHVGNLVVPLPNLPLVDEDGNIKTEPVAVLARRVVPRRNEP 90
Query: 360 GVKVLVQWINMGADEATLEDWGCLKSQFPDF 452
+ LV W N+ ++AT ED +++ FP F
Sbjct: 91 VTQWLVHWENLSPEDATWEDSAFIQATFPHF 121
>emb|CAD41876.2| OSJNBa0041A02.23 [Oryza sativa Japonica Group]
Length = 1373
Score = 75.5 bits (184), Expect = 7e-12
Identities = 37/91 (40%), Positives = 54/91 (59%)
Frame = +3
Query: 180 LELPAGFQIHPVFHISQLKKRVEPSITPLDQPPICNSHGQVLVQPLALLQRRMVKINNAM 359
L+LP IHPVFH+SQLKK V + PL P+ + G + +P+A+L RR+V N
Sbjct: 1281 LQLPEEAGIHPVFHVSQLKKHVGNLVVPLPNLPLVDEDGNIKTEPVAVLARRVVPRRNEP 1340
Query: 360 GVKVLVQWINMGADEATLEDWGCLKSQFPDF 452
+ LV W N+ ++AT ED +++ FP F
Sbjct: 1341 VTQWLVHWENLSPEDATWEDSAFIQATFPHF 1371
>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/95 (37%), Positives = 57/95 (60%)
Frame = +3
Query: 177 RLELPAGFQIHPVFHISQLKKRVEPSITPLDQPPICNSHGQVLVQPLALLQRRMVKINNA 356
RL+LP G IHPVFHISQLK+ + P + P+ G++ +P + + R + N+
Sbjct: 1243 RLQLPEGVGIHPVFHISQLKQHCGANSIPSPELPMVGKDGKIKTEPSLVKETRAMPRNHT 1302
Query: 357 MGVKVLVQWINMGADEATLEDWGCLKSQFPDFVAQ 461
+ + LVQW N+ ++A+ ED +KS FP+F +Q
Sbjct: 1303 LVTQWLVQWANLPPEDASWEDASFIKSTFPEFYSQ 1337
>gb|ABF98227.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1160
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/92 (40%), Positives = 55/92 (59%)
Frame = +3
Query: 177 RLELPAGFQIHPVFHISQLKKRVEPSITPLDQPPICNSHGQVLVQPLALLQRRMVKINNA 356
+L+LP IHPVFH+SQLKK V PL P+ + G V +PLA+L RR++ N
Sbjct: 1067 KLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVKTEPLAVLARRVIPRQNE 1126
Query: 357 MGVKVLVQWINMGADEATLEDWGCLKSQFPDF 452
V+ L+ W N+ ++AT E+ +++ FP F
Sbjct: 1127 PVVQWLIHWENLTPEDATWENATFIQATFPHF 1158
>gb|AAP68389.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1246
Score = 74.3 bits (181), Expect = 2e-11
Identities = 37/92 (40%), Positives = 55/92 (59%)
Frame = +3
Query: 177 RLELPAGFQIHPVFHISQLKKRVEPSITPLDQPPICNSHGQVLVQPLALLQRRMVKINNA 356
+L+LP IHPVFH+SQLKK V PL P+ + G V +PLA+L RR++ N
Sbjct: 1153 KLQLPEEANIHPVFHVSQLKKHVGRQAIPLPNLPLVGADGTVKTEPLAVLARRVIPRQNE 1212
Query: 357 MGVKVLVQWINMGADEATLEDWGCLKSQFPDF 452
V+ L+ W N+ ++AT E+ +++ FP F
Sbjct: 1213 PVVQWLIHWENLTPEDATWENATFIQATFPHF 1244
>ref|NP_001050226.1| Os03g0377400 [Oryza sativa Japonica Group]
gi|108708439|gb|ABF96234.1| retrotransposon protein,
putative, unclassified, expressed [Oryza sativa Japonica
Group] gi|113548697|dbj|BAF12140.1| Os03g0377400 [Oryza
sativa Japonica Group]
Length = 257
Score = 72.0 bits (175), Expect = 8e-11
Identities = 41/93 (44%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Frame = +3
Query: 177 RLELPAGFQIHPVFHISQLKKRVE---PSITPLDQPPICNSHGQVLVQPLALLQRRMVKI 347
RL+LP IHPVFH+SQLK V P T L P + ++ V P +L RR+VK
Sbjct: 146 RLQLPDSSLIHPVFHVSQLKAHVPDHTPVFTSLPHPVVLDAAD---VWPEEILDRRLVKK 202
Query: 348 NNAMGVKVLVQWINMGADEATLEDWGCLKSQFP 446
NA V+VL++W ++ A +AT ED+ LK++FP
Sbjct: 203 GNATHVQVLIKWSSLPAHQATWEDYEVLKTRFP 235