BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00028613
         (1106 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A...    68   1e-21
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...    79   6e-17
ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein A...    75   7e-17
ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605...    59   2e-15
ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253...    64   1e-14
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579...    54   9e-13
ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595...    74   8e-11
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A...    49   2e-10
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596...    62   3e-10
ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein A...    47   3e-09
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A...    50   3e-09
ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein A...    68   6e-09
ref|XP_006344597.1| PREDICTED: uncharacterized protein LOC102605...    49   8e-09
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A...    47   3e-08
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261...    41   9e-08
ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein A...    47   2e-07
ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein A...    41   7e-07
ref|XP_004253220.1| PREDICTED: uncharacterized protein LOC101264...    42   8e-07
ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...    40   9e-07
ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein A...    40   3e-06

>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 1035

 Score = 67.8 bits (164), Expect(3) = 1e-21
 Identities = 31/91 (34%), Positives = 53/91 (58%)
 Frame = +3

Query: 246 KRQPRRGSYGFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*T 425
           K  PR  SYG+  RD++G+L++  A  I   TN EAE   + +A+++C    L ++ + T
Sbjct: 688 KGNPRMSSYGYCIRDKNGDLLYAEAHNIGETTNMEAEATTVWKALQFCYENGLRKVRLET 747

Query: 426 DSQLVKRILAEG*KPPWNIVNWIEEIRQTME 518
           DS  ++ ++    K PW +V  +EEI + M+
Sbjct: 748 DSLALQNMITRSWKIPWELVEKLEEIHEIMQ 778



 Score = 53.9 bits (128), Expect(3) = 1e-21
 Identities = 24/65 (36%), Positives = 36/65 (55%)
 Frame = +1

Query: 61  YQIFVTIQNLVKFKNPSMQQILSSWGCMIQCLNSYRERVKYRRVIWHPPPRGWVLCNTDG 240
           YQ  + +  LV  K P ++ +   W  ++  L +Y+  + Y+ V W  P  GWV CNTDG
Sbjct: 626 YQCQLILYQLVTIKFPWIKGLTYHWPQVVGMLQNYKPPLHYKVVRWRKPSEGWVTCNTDG 685

Query: 241 ASRDN 255
           AS+ N
Sbjct: 686 ASKGN 690



 Score = 29.3 bits (64), Expect(3) = 1e-21
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 2   LWKRRNAYKHGGKNLLQDAY 61
           LWKRRN+Y+HG +    + Y
Sbjct: 606 LWKRRNSYRHGKETTYNNMY 625


>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 885

 Score = 79.3 bits (194), Expect(2) = 6e-17
 Identities = 38/88 (43%), Positives = 59/88 (67%)
 Frame = +3

Query: 255 PRRGSYGFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*TDSQ 434
           P   S+GF  RD+ G+LI+  A+ I   TN EAET+AIL A++ C N+++ +++I TDS 
Sbjct: 720 PGLSSFGFCIRDDKGDLIYAKAKGIGIATNMEAETVAILTALRECSNRKMQKVIIETDSL 779

Query: 435 LVKRILAEG*KPPWNIVNWIEEIRQTME 518
            +K+I+ +  + PW I   +EEIR+ ME
Sbjct: 780 SLKKIIQQTWRVPWKIAEKVEEIREIME 807



 Score = 35.8 bits (81), Expect(2) = 6e-17
 Identities = 15/32 (46%), Positives = 24/32 (75%)
 Frame = +2

Query: 521 ETRYGKFMDMEVKLRKILNSDKSQVPYIRIQT 616
           E +Y  F ++ +K R+ILN DK+Q+P +RI+T
Sbjct: 837 EHQYSCFQELPLKERRILNIDKAQIPTLRIRT 868



 Score = 53.9 bits (128), Expect(2) = 4e-06
 Identities = 25/78 (32%), Positives = 42/78 (53%)
 Frame = +1

Query: 52  RCIYQIFVTIQNLVKFKNPSMQQILSSWGCMIQCLNSYRERVKYRRVIWHPPPRGWVLCN 231
           R +  +   ++ +VK + P ++ +  +W  +IQ LN Y+ ++   RV W PP   +V  N
Sbjct: 652 RMVEMVIEVVRKMVKSQFPWIKNMRWTWQAIIQRLNQYKRKIHVLRVTWKPPDDHYVKSN 711

Query: 232 TDGASRDNLGEAHMDFIL 285
           TDGA R N G +   F +
Sbjct: 712 TDGACRGNPGLSSFGFCI 729



 Score = 24.6 bits (52), Expect(2) = 4e-06
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +2

Query: 2   LWKRRNAYKH 31
           LWKRRNA KH
Sbjct: 635 LWKRRNALKH 644


>ref|XP_006338209.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 198

 Score = 74.7 bits (182), Expect(3) = 7e-17
 Identities = 38/90 (42%), Positives = 57/90 (63%)
 Frame = +3

Query: 246 KRQPRRGSYGFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*T 425
           K  P   +YG+  R+ +G+LIH  AE I   TN EAE  AILEAI++C NK++ +I++ +
Sbjct: 36  KGNPGISAYGYCLRNSNGDLIHVTAENIGITTNVEAEMRAILEAIRYCVNKKMRKIILES 95

Query: 426 DSQLVKRILAEG*KPPWNIVNWIEEIRQTM 515
           DS L+ +I+ E  K  W I    +E++Q M
Sbjct: 96  DSLLMVKIINEAWKVLWVIAEEFDELKQEM 125



 Score = 33.9 bits (76), Expect(3) = 7e-17
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +1

Query: 142 MIQCLNSYRERVKYRRVIWHPPPRGWVLCNTDGASRDNLG 261
           MI+ L + + R+ +  V W  P    + CNTDGAS+ N G
Sbjct: 1   MIRRLGANKSRLYHCTVRWDAPHEDVIKCNTDGASKGNPG 40



 Score = 26.2 bits (56), Expect(3) = 7e-17
 Identities = 10/29 (34%), Positives = 18/29 (62%)
 Frame = +2

Query: 530 YGKFMDMEVKLRKILNSDKSQVPYIRIQT 616
           +  F  +    RKI+N +K+Q+P +R +T
Sbjct: 159 FSSFQQLPSLGRKIINMEKAQIPSLRCRT 187


>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
          Length = 333

 Score = 58.5 bits (140), Expect(3) = 2e-15
 Identities = 32/83 (38%), Positives = 49/83 (59%)
 Frame = +3

Query: 255 PRRGSYGFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*TDSQ 434
           P   SYGF  R+  G+L++   +EI+  TN E E +AI E +  C  K + +  + TDSQ
Sbjct: 179 PEISSYGFCLRNSVGDLVYVQGKEIQEGTNLEVEAVAIREDLAHCVTKGVMKACLETDSQ 238

Query: 435 LVKRILAEG*KPPWNIVNWIEEI 503
           ++ +IL    + PW+IV  IE+I
Sbjct: 239 VLIKILTRIWEVPWSIVVIIEDI 261



 Score = 47.0 bits (110), Expect(3) = 2e-15
 Identities = 23/74 (31%), Positives = 37/74 (50%)
 Frame = +1

Query: 34  RKESVTRCIYQIFVTIQNLVKFKNPSMQQILSSWGCMIQCLNSYRERVKYRRVIWHPPPR 213
           R  S    +Y++   +  L +   P +Q   + W  ++ CL  ++ ++ Y  V W  PP 
Sbjct: 106 RPSSYNNLVYRVNSDLWKLGRTIYPKLQDFPTKWSDIVACLEKHKPKLYYLPVCW-KPPE 164

Query: 214 GWVLCNTDGASRDN 255
           G + CNTD ASR N
Sbjct: 165 GILTCNTDVASRCN 178



 Score = 24.6 bits (52), Expect(3) = 2e-15
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +2

Query: 2   LWKRRNAYKHG 34
           LWKRRN  KHG
Sbjct: 95  LWKRRNNLKHG 105


>ref|XP_004233852.1| PREDICTED: uncharacterized protein LOC101253557 [Solanum
            lycopersicum]
          Length = 13995

 Score = 63.9 bits (154), Expect(2) = 1e-14
 Identities = 34/72 (47%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
 Frame = +3

Query: 243  IKRQPRRGSYGFYFRDEDGNLIHTAAEEIEWV--TNTEAETMAILEAIKWCKNKQLDRIM 416
            IK  PRR S+ F  RDE G+++   A+EI  +  TNT+AE MAIL+A+K+ +  Q+DR++
Sbjct: 3183 IKTDPRRSSWVFCVRDEQGDILQAQAQEIGELACTNTQAEAMAILQALKFIEATQMDRVV 3242

Query: 417  I*TDSQLVKRIL 452
            I TDS L   I+
Sbjct: 3243 IKTDSLLTNNIV 3254



 Score = 43.1 bits (100), Expect(2) = 1e-14
 Identities = 20/65 (30%), Positives = 34/65 (52%)
 Frame = +1

Query: 43   SVTRCIYQIFVTIQNLVKFKNPSMQQILSSWGCMIQCLNSYRERVKYRRVIWHPPPRGWV 222
            S +R I+QI      L+K +  S + +  +W  +++ LN+Y  + K  +VIW  P  G +
Sbjct: 3122 SSSRLIFQIIAYSGLLIKTRRRSRKHVPYNWRIVVEALNNYNLKAKVTKVIWKAPDTGQI 3181

Query: 223  LCNTD 237
               TD
Sbjct: 3182 KIKTD 3186


>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
          Length = 778

 Score = 53.5 bits (127), Expect(3) = 9e-13
 Identities = 31/98 (31%), Positives = 55/98 (56%)
 Frame = +3

Query: 246 KRQPRRGSYGFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*T 425
           K  PR  + GF  R+ +G  I+T ++E+ + T+ EAE +A    +++C +  L  +++ T
Sbjct: 148 KGNPRPSAGGFCIRNWNGEFIYTTSQELGFKTSLEAEVIAFERGLQFCMSHNLLPVILET 207

Query: 426 DSQLVKRILAEG*KPPWNIVNWIEEIRQTMEGKQGMVS 539
           DS +V +IL    + PW+I   I++I+      Q  VS
Sbjct: 208 DSLIVSKILDGIWETPWSISLLIKKIQWLRRDGQVEVS 245



 Score = 41.6 bits (96), Expect(3) = 9e-13
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = +1

Query: 64  QIFVTIQNLVKFKNPSMQQILSSWGCMIQCLNSYRERVKYRRVIWHPPPRGWVLCNTDGA 243
           +I   I NL   + P ++ I   W  M++   +Y   +  + + W PP  G   CNTD A
Sbjct: 87  EITRNIHNLAMVRYPWLRNIPKDWSMMVKFFENYISVLATKVIYWVPPNMGVYKCNTDCA 146

Query: 244 SRDN 255
           S+ N
Sbjct: 147 SKGN 150



 Score = 25.4 bits (54), Expect(3) = 9e-13
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 5   WKRRNAYKHGGK 40
           WK RN  KHGGK
Sbjct: 67  WKGRNTVKHGGK 78


>ref|XP_006343440.1| PREDICTED: uncharacterized protein LOC102595406 [Solanum tuberosum]
          Length = 866

 Score = 74.3 bits (181), Expect = 8e-11
 Identities = 40/91 (43%), Positives = 53/91 (58%)
 Frame = +3

Query: 246  KRQPRRGSYGFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*T 425
            K  P + SY +  RD++GNLI+  AEEI   TN EAE +AI EAI  C  +   R+ I T
Sbjct: 751  KGNPGKSSYAYCLRDQEGNLIYAQAEEIPETTNVEAEAVAIKEAIYHCTTRGFSRVTIET 810

Query: 426  DSQLVKRILAEG*KPPWNIVNWIEEIRQTME 518
            DS L+K IL    + PWNI   +E+    M+
Sbjct: 811  DSLLLKNILQGNWEIPWNIRIIVEDTLTLMQ 841



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 31/94 (32%), Positives = 55/94 (58%)
 Frame = +1

Query: 4   MEKEECIQAWRKESVTRCIYQIFVTIQNLVKFKNPSMQQILSSWGCMIQCLNSYRERVKY 183
           MEK++  Q W   +  + +YQ+ + +    +   PSM+Q  ++W  M++ L +Y+ R+ Y
Sbjct: 670 MEKKKYHQTWGNMTYNKLVYQVTLNVWQFARSSFPSMKQFPTNWSDMVKFLENYKPRIYY 729

Query: 184 RRVIWHPPPRGWVLCNTDGASRDNLGEAHMDFIL 285
           +++IW PP      CNTDGAS+ N G++   + L
Sbjct: 730 KKIIWMPPNSNTRKCNTDGASKGNPGKSSYAYCL 763


>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 668

 Score = 48.5 bits (114), Expect(3) = 2e-10
 Identities = 27/79 (34%), Positives = 42/79 (53%)
 Frame = +3

Query: 273 GFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*TDSQLVKRIL 452
           G   RD++G ++   A  +   TN +AE  A L  + W        I+I  DSQLV + +
Sbjct: 520 GGIIRDKEGKIVLAFATPLGDGTNNKAEAEAALFGLSWALELGHRNILIELDSQLVVQWI 579

Query: 453 AEG*KPPWNIVNWIEEIRQ 509
           ++   P WN++N IE I+Q
Sbjct: 580 SKKEPPHWNVINQIERIQQ 598



 Score = 40.8 bits (94), Expect(3) = 2e-10
 Identities = 20/81 (24%), Positives = 36/81 (44%)
 Frame = +1

Query: 19  CIQAWRKESVTRCIYQIFVTIQNLVKFKNPSMQQILSSWGCMIQCLNSYRERVKYRRVIW 198
           C    +  +++R  Y I+     ++K   P +     +W  +IQ     +  +K     W
Sbjct: 436 CKYGGKSTNISRVKYAIYKDTFKMLKSAFPCINWP-GNWAALIQTAERCKHEIKVCMTTW 494

Query: 199 HPPPRGWVLCNTDGASRDNLG 261
           + PP  W+  NTDG++  N G
Sbjct: 495 NRPPEQWIKINTDGSALINTG 515



 Score = 23.5 bits (49), Expect(3) = 2e-10
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 2   LWKRRNAYKHGGKN 43
           LWK R A K+GGK+
Sbjct: 429 LWKNRCACKYGGKS 442


>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
          Length = 1135

 Score = 61.6 bits (148), Expect(2) = 3e-10
 Identities = 32/76 (42%), Positives = 48/76 (63%)
 Frame = +3

Query: 267  SYGFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*TDSQLVKR 446
            S  F  RDE+G+LI+  A+ I   TN EAE +A+LEA+ +C+ K L   +I TDS ++K+
Sbjct: 1060 STSFVVRDEEGDLIYARAKGIGIATNMEAEALALLEAVWYCQEKDLKEPIIETDSLVLKK 1119

Query: 447  ILAEG*KPPWNIVNWI 494
            ++    K PW +V  I
Sbjct: 1120 MVDNQWKIPWELVERI 1135



 Score = 30.8 bits (68), Expect(2) = 3e-10
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 205  PPRGWVLCNTDGASRDNLGEAHMDFIL 285
            P R  V CNTDGA+R N G +   F++
Sbjct: 1039 PGRNKVKCNTDGAARGNSGASSTSFVV 1065


>ref|XP_004239568.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 308

 Score = 46.6 bits (109), Expect(2) = 3e-09
 Identities = 22/82 (26%), Positives = 41/82 (50%)
 Frame = +1

Query: 19  CIQAWRKESVTRCIYQIFVTIQNLVKFKNPSMQQILSSWGCMIQCLNSYRERVKYRRVIW 198
           C    +  +++R  Y ++     ++K   P ++   +SW  +IQ     +  +K   V W
Sbjct: 73  CKYGAKATNISRVKYAVYKDTFKMLKIAFPHIKWP-ASWTALIQTSEKCKHEIKVCMVAW 131

Query: 199 HPPPRGWVLCNTDGASRDNLGE 264
           + PP  W+  NTDG++  NLG+
Sbjct: 132 NRPPEQWIKINTDGSALTNLGQ 153



 Score = 42.7 bits (99), Expect(2) = 3e-09
 Identities = 24/78 (30%), Positives = 39/78 (50%)
 Frame = +3

Query: 273 GFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*TDSQLVKRIL 452
           G   RD +G ++   A  +   +N +AET A L  + W        I+I  DSQLV + +
Sbjct: 157 GGILRDREGKMVLAFATPLGEGSNNKAETAAALFGLSWALELGYRNILIELDSQLVVQWI 216

Query: 453 AEG*KPPWNIVNWIEEIR 506
           ++   P W++   IE I+
Sbjct: 217 SKKTAPHWSVTKQIERIQ 234


>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 389

 Score = 50.1 bits (118), Expect(2) = 3e-09
 Identities = 23/78 (29%), Positives = 43/78 (55%)
 Frame = +3

Query: 273 GFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*TDSQLVKRIL 452
           G   RD  G LI+  A  + + TN  AE  A L  ++WC+    ++I++  DS+L+ + +
Sbjct: 238 GGILRDHQGKLIYAFAIPLGFGTNNFAEIQAALHGLQWCQQHGFEKIILEVDSELLHKWI 297

Query: 453 AEG*KPPWNIVNWIEEIR 506
                 PW  +++I++I+
Sbjct: 298 INKSSVPWRCLHYIQQIQ 315



 Score = 38.9 bits (89), Expect(2) = 3e-09
 Identities = 22/77 (28%), Positives = 37/77 (48%)
 Frame = +1

Query: 34  RKESVTRCIYQIFVTIQNLVKFKNPSMQQILSSWGCMIQCLNSYRERVKYRRVIWHPPPR 213
           +  S+ R    IF  I  ++K   P++    SSW  +   +   ++ +K   V W  PP 
Sbjct: 159 KPSSIYRVESGIFKDIMQIIKAVYPNIPW-QSSWERLFNLVEQCQQHLKVTMVNWERPPE 217

Query: 214 GWVLCNTDGASRDNLGE 264
           G    NTDG+++ N G+
Sbjct: 218 GIHKLNTDGSAKHNTGK 234


>ref|XP_006355175.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 143

 Score = 68.2 bits (165), Expect = 6e-09
 Identities = 32/90 (35%), Positives = 53/90 (58%)
 Frame = +3

Query: 246 KRQPRRGSYGFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*T 425
           K  P + SYGF  R+  G L++   + I   TN +AE+MAI +A+++C ++   ++ + T
Sbjct: 36  KGNPDQSSYGFCIRNHTGELLYAEVQSIGVTTNMDAESMAIWKALQYCLSQGFQQVSLET 95

Query: 426 DSQLVKRILAEG*KPPWNIVNWIEEIRQTM 515
           DS  +K IL    K PW +V  +E+I + M
Sbjct: 96  DSLTLKNILVRNWKTPWELVERVEDILEIM 125


>ref|XP_006344597.1| PREDICTED: uncharacterized protein LOC102605041 [Solanum tuberosum]
          Length = 220

 Score = 49.3 bits (116), Expect(2) = 8e-09
 Identities = 24/56 (42%), Positives = 31/56 (55%)
 Frame = +1

Query: 112 MQQILSSWGCMIQCLNSYRERVKYRRVIWHPPPRGWVLCNTDGASRDNLGEAHMDF 279
           ++Q+L  W       +S+R     R V W PPP GW  CNTDGASR N G + + F
Sbjct: 53  VKQVLLKWW---DAKDSFRPSFTSREVRWSPPPLGWWKCNTDGASRGNSGPSTIAF 105



 Score = 38.5 bits (88), Expect(2) = 8e-09
 Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
 Frame = +3

Query: 276 FYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*TDSQLVKRILA 455
           F  RD  G+L+      I+  TN  AE MA+ E  K+C       +++ +DS  +  +L 
Sbjct: 105 FCVRDSSGDLVGAKGLRIQDTTNITAEAMALKEGRKYCLENGFSLVIMESDSLSLINMLN 164

Query: 456 EG*KPPWNI---VNWIEEIRQTM 515
                PW++   VN I  +R  M
Sbjct: 165 GDWIVPWSVTLEVNSINRMRALM 187


>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 468

 Score = 47.0 bits (110), Expect(2) = 3e-08
 Identities = 24/79 (30%), Positives = 41/79 (51%)
 Frame = +3

Query: 273 GFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*TDSQLVKRIL 452
           G   RD++G +I   +  +   +N +AE  A L  + W        I++  DSQLV + +
Sbjct: 317 GGIIRDKEGKMIMAFSTPLGEGSNNQAEIEAALFGLTWAFELGFKNILLELDSQLVVQWI 376

Query: 453 AEG*KPPWNIVNWIEEIRQ 509
           +    PPWN+ N +E ++Q
Sbjct: 377 SNKIAPPWNLTNQLERLQQ 395



 Score = 38.9 bits (89), Expect(2) = 3e-08
 Identities = 21/82 (25%), Positives = 38/82 (46%)
 Frame = +1

Query: 19  CIQAWRKESVTRCIYQIFVTIQNLVKFKNPSMQQILSSWGCMIQCLNSYRERVKYRRVIW 198
           C    +  +++R  Y I+     ++K   PS+    ++W  +I         +K  +V W
Sbjct: 233 CKYGGKGTNISRVKYAIYKDTFKMLKNSFPSINWP-ANWTTLILTSEKCVHNIKVYKVTW 291

Query: 199 HPPPRGWVLCNTDGASRDNLGE 264
             PP  W+  NTDG++  N G+
Sbjct: 292 FKPPDQWIKINTDGSALTNEGK 313


>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
            lycopersicum]
          Length = 1246

 Score = 40.8 bits (94), Expect(3) = 9e-08
 Identities = 23/77 (29%), Positives = 38/77 (49%)
 Frame = +1

Query: 34   RKESVTRCIYQIFVTIQNLVKFKNPSMQQILSSWGCMIQCLNSYRERVKYRRVIWHPPPR 213
            +  S+ R  Y IF  +  ++K   PS+    SSW  +I  +   +++ K   V W+ P  
Sbjct: 1031 KSSSIHRVQYGIFKDVMQVIKIVFPSIPW-QSSWNKLINIVEHCKQQYKIVLVSWNKPGL 1089

Query: 214  GWVLCNTDGASRDNLGE 264
            G    NTDG++  N G+
Sbjct: 1090 GTYKLNTDGSALQNSGK 1106



 Score = 40.8 bits (94), Expect(3) = 9e-08
 Identities = 22/79 (27%), Positives = 37/79 (46%)
 Frame = +3

Query: 273  GFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*TDSQLVKRIL 452
            G   RD  G +++  +    + TN  AE  A L  ++WC      R+ +  DSQL+   +
Sbjct: 1110 GGILRDHQGKIVYAFSLPFGFGTNNIAEIKAALYGLEWCDQHGYKRVELEVDSQLLCNWI 1169

Query: 453  AEG*KPPWNIVNWIEEIRQ 509
                  PW   + I++I+Q
Sbjct: 1170 KNKTNIPWIYEDLIQQIKQ 1188



 Score = 21.6 bits (44), Expect(3) = 9e-08
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 2    LWKRRNAYKHGGKN 43
            LWK R A K+G K+
Sbjct: 1019 LWKNRCAVKYGNKS 1032


>ref|XP_004247278.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 213

 Score = 47.0 bits (110), Expect(2) = 2e-07
 Identities = 24/79 (30%), Positives = 41/79 (51%)
 Frame = +3

Query: 273 GFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*TDSQLVKRIL 452
           G   RD++G +I   +  +   +N +AE  A L  + W        I++  DSQLV + +
Sbjct: 62  GGIIRDKEGKMIMAFSTPLGEGSNNQAEIEAALFGLTWAFELGFKNILLELDSQLVVQWI 121

Query: 453 AEG*KPPWNIVNWIEEIRQ 509
           +    PPWN+ N +E ++Q
Sbjct: 122 SNKIAPPWNLTNQLERLQQ 140



 Score = 36.2 bits (82), Expect(2) = 2e-07
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +1

Query: 127 SSWGCMIQCLNSYRERVKYRRVIWHPPPRGWVLCNTDGASRDNLGE 264
           ++W  +IQ        ++  +V W  PP  W+  NTDG++  N G+
Sbjct: 13  ANWTALIQTSEKCVHNIEVYKVAWFKPPDQWIKINTDGSALTNEGK 58


>ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 375

 Score = 41.2 bits (95), Expect(3) = 7e-07
 Identities = 19/81 (23%), Positives = 36/81 (44%)
 Frame = +1

Query: 19  CIQAWRKESVTRCIYQIFVTIQNLVKFKNPSMQQILSSWGCMIQCLNSYRERVKYRRVIW 198
           C    +  +++R  Y ++     ++K   P +     +W  +IQ     +  +K     W
Sbjct: 165 CKYGGKSTNISRVKYAVYKDTFKMLKIAFPRVNWP-GNWAALIQTAERCKHEIKVCMTTW 223

Query: 199 HPPPRGWVLCNTDGASRDNLG 261
           + PP  W+  NTDG++  N G
Sbjct: 224 NRPPEQWIKINTDGSALINTG 244



 Score = 35.4 bits (80), Expect(3) = 7e-07
 Identities = 22/76 (28%), Positives = 35/76 (46%)
 Frame = +3

Query: 273 GFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*TDSQLVKRIL 452
           G   RD++G ++   A  +   TN +AE  A L  + W        I+I  DSQLV   +
Sbjct: 249 GGIIRDKEGKMVLAFATPLGDGTNNKAEAEAALFGLSWALELGHRNILIELDSQLVVHWI 308

Query: 453 AEG*KPPWNIVNWIEE 500
           ++   P     NW+ +
Sbjct: 309 SKKEPPIGMEANWVAD 324



 Score = 23.5 bits (49), Expect(3) = 7e-07
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +2

Query: 2   LWKRRNAYKHGGKN 43
           LWK R A K+GGK+
Sbjct: 158 LWKNRCACKYGGKS 171


>ref|XP_004253220.1| PREDICTED: uncharacterized protein LOC101264807 [Solanum
            lycopersicum]
          Length = 934

 Score = 42.4 bits (98), Expect(2) = 8e-07
 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
 Frame = +3

Query: 273  GFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*TDSQLVKRIL 452
            G   RD+   LI+  +  + + TN  AE  A L  + WC+     RI++  DS+L+ + +
Sbjct: 783  GGILRDDQDKLIYVFSIPLAFGTNNFAEIQAALHGLNWCQQHGFKRIILEVDSELLVKWI 842

Query: 453  AEG*KPPWNI---VNWIEEIRQTME 518
                  PW     +  +++I + ME
Sbjct: 843  TNTQSIPWRSQPDIQQLQDISKNME 867



 Score = 38.5 bits (88), Expect(2) = 8e-07
 Identities = 20/77 (25%), Positives = 40/77 (51%)
 Frame = +1

Query: 34  RKESVTRCIYQIFVTIQNLVKFKNPSMQQILSSWGCMIQCLNSYRERVKYRRVIWHPPPR 213
           ++ +++R    IF     +++   P +   L+SW  ++  ++ Y++  K   V W+ PP 
Sbjct: 704 KQSNISRVELAIFKDSMQIIQSVYPIIPW-LNSWDRLLNYVDQYQQYFKVTLVRWNRPPS 762

Query: 214 GWVLCNTDGASRDNLGE 264
           G    NTDG++  N G+
Sbjct: 763 GIYKLNTDGSAIHNTGQ 779


>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
            lycopersicum]
          Length = 1454

 Score = 40.0 bits (92), Expect(3) = 9e-07
 Identities = 22/79 (27%), Positives = 35/79 (44%)
 Frame = +3

Query: 273  GFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*TDSQLVKRIL 452
            G   RD  G +I+  +    + TN  AE  A L  + WC+     +I +  DS+L+   +
Sbjct: 1303 GGILRDNQGKIIYAFSLPFGFGTNNFAEIKAALHGLDWCEQHGYKKIELEVDSKLLCNWI 1362

Query: 453  AEG*KPPWNIVNWIEEIRQ 509
                  PW     I++I Q
Sbjct: 1363 NSNINIPWRYEELIQQIHQ 1381



 Score = 37.7 bits (86), Expect(3) = 9e-07
 Identities = 22/77 (28%), Positives = 36/77 (46%)
 Frame = +1

Query: 34   RKESVTRCIYQIFVTIQNLVKFKNPSMQQILSSWGCMIQCLNSYRERVKYRRVIWHPPPR 213
            +  S+ R  Y IF  I  ++    PS+    +SW  +I  +   ++  K   V W+ P  
Sbjct: 1224 KNSSIYRVQYGIFKNIMQVITIVFPSIPW-QTSWNNLINIVEQCKQHYKILIVKWNKPDL 1282

Query: 214  GWVLCNTDGASRDNLGE 264
            G    NTDG++  N G+
Sbjct: 1283 GKYKLNTDGSALQNSGK 1299



 Score = 21.9 bits (45), Expect(3) = 9e-07
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 2    LWKRRNAYKHGGKN 43
            LWK R A K+G KN
Sbjct: 1212 LWKNRCAVKYGLKN 1225


>ref|XP_004243166.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 316

 Score = 40.4 bits (93), Expect(2) = 3e-06
 Identities = 20/82 (24%), Positives = 41/82 (50%)
 Frame = +1

Query: 19  CIQAWRKESVTRCIYQIFVTIQNLVKFKNPSMQQILSSWGCMIQCLNSYRERVKYRRVIW 198
           C    +  +++R  Y I+     +++   P ++   S+W  + Q     +  +K  +V W
Sbjct: 81  CKYGGKATNISRVKYAIYKDTFKMLQNTFPHIKWP-SNWTALYQTSEKCKHDIKVCKVAW 139

Query: 199 HPPPRGWVLCNTDGASRDNLGE 264
           + PP  W+  NTDG++ +N G+
Sbjct: 140 NRPPEEWIKINTDGSAINNPGK 161



 Score = 38.5 bits (88), Expect(2) = 3e-06
 Identities = 22/88 (25%), Positives = 43/88 (48%)
 Frame = +3

Query: 255 PRRGSYGFYFRDEDGNLIHTAAEEIEWVTNTEAETMAILEAIKWCKNKQLDRIMI*TDSQ 434
           P +   G   RD +G L+   A  +   +N +AE  A    + W  +     I++  DSQ
Sbjct: 159 PGKIGAGGILRDTEGRLVLAFATSLGEGSNNQAEMEAAQFGLSWAIDLDYRNIILEVDSQ 218

Query: 435 LVKRILAEG*KPPWNIVNWIEEIRQTME 518
           +V + + +     W++ N +E+I+Q ++
Sbjct: 219 IVVQWITKKTTHHWSVSNQLEKIQQLIQ 246