BLASTX nr result
ID: Atropa21_contig00028551
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00028551
(457 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006339440.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
ref|XP_004229820.1| PREDICTED: pentatricopeptide repeat-containi... 100 3e-19
ref|XP_004306911.1| PREDICTED: pentatricopeptide repeat-containi... 82 6e-14
gb|EOX96192.1| Tetratricopeptide repeat (TPR)-like superfamily p... 82 7e-14
emb|CBI38862.3| unnamed protein product [Vitis vinifera] 81 1e-13
ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containi... 81 1e-13
gb|EMJ21574.1| hypothetical protein PRUPE_ppa018787mg [Prunus pe... 79 6e-13
ref|XP_006445236.1| hypothetical protein CICLE_v10020287mg [Citr... 79 8e-13
gb|EXB52663.1| hypothetical protein L484_022440 [Morus notabilis] 77 2e-12
ref|NP_171699.1| pentatricopeptide repeat-containing protein [Ar... 74 3e-11
ref|XP_002892034.1| pentatricopeptide repeat-containing protein ... 74 3e-11
ref|XP_006418475.1| hypothetical protein EUTSA_v10007755mg [Eutr... 73 5e-11
ref|XP_004134345.1| PREDICTED: pentatricopeptide repeat-containi... 73 5e-11
ref|XP_004492640.1| PREDICTED: pentatricopeptide repeat-containi... 71 1e-10
gb|AFK47264.1| unknown [Lotus japonicus] 70 2e-10
ref|XP_006307695.1| hypothetical protein CARUB_v10009324mg [Caps... 69 7e-10
ref|XP_003623723.1| Pentatricopeptide repeat-containing protein ... 69 7e-10
ref|XP_002320730.1| hypothetical protein POPTR_0014s06610g [Popu... 69 8e-10
ref|XP_006826257.1| hypothetical protein AMTR_s00004p00026400 [A... 68 1e-09
gb|EPS65198.1| hypothetical protein M569_09579 [Genlisea aurea] 68 1e-09
>ref|XP_006339440.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like [Solanum tuberosum]
Length = 415
Score = 100 bits (248), Expect = 3e-19
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = -2
Query: 156 LKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSRGFTCDQ 1
L+VAELSLLAESFEAN+RDYTKIIHGYAKQNRLKEAESV LSMKSRGFTCDQ
Sbjct: 155 LEVAELSLLAESFEANIRDYTKIIHGYAKQNRLKEAESVFLSMKSRGFTCDQ 206
>ref|XP_004229820.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like [Solanum lycopersicum]
Length = 415
Score = 100 bits (248), Expect = 3e-19
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = -2
Query: 156 LKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSRGFTCDQ 1
L+VAELSLLAESFEAN+RDYTKIIHGYAKQNRLKEAESV LSMKSRGFTCDQ
Sbjct: 155 LEVAELSLLAESFEANIRDYTKIIHGYAKQNRLKEAESVFLSMKSRGFTCDQ 206
>ref|XP_004306911.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like [Fragaria vesca subsp. vesca]
Length = 415
Score = 82.4 bits (202), Expect = 6e-14
Identities = 37/52 (71%), Positives = 47/52 (90%)
Frame = -2
Query: 156 LKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSRGFTCDQ 1
L+VAE+++L +SFE NVRDYTKIIHGY K+NR+++AES LL+MKSRGF CDQ
Sbjct: 151 LQVAEIAVLDDSFEPNVRDYTKIIHGYGKRNRIEDAESTLLNMKSRGFVCDQ 202
>gb|EOX96192.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 420
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/51 (72%), Positives = 46/51 (90%)
Frame = -2
Query: 153 KVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSRGFTCDQ 1
+VAEL+LL ESFEAN+RD+TKIIHGY KQ RL+EAE++L++MK RGF CDQ
Sbjct: 157 EVAELALLEESFEANIRDFTKIIHGYGKQKRLQEAENILVAMKRRGFICDQ 207
>emb|CBI38862.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/53 (71%), Positives = 46/53 (86%)
Frame = -2
Query: 159 ILKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSRGFTCDQ 1
+L+VAEL+LL ESFEAN+RDYTKII GY KQNRL++AE+ L +MK RGF CDQ
Sbjct: 87 LLEVAELALLEESFEANIRDYTKIIDGYGKQNRLQDAENTLSAMKRRGFICDQ 139
>ref|XP_002273719.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like [Vitis vinifera]
Length = 352
Score = 81.3 bits (199), Expect = 1e-13
Identities = 38/53 (71%), Positives = 46/53 (86%)
Frame = -2
Query: 159 ILKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSRGFTCDQ 1
+L+VAEL+LL ESFEAN+RDYTKII GY KQNRL++AE+ L +MK RGF CDQ
Sbjct: 87 LLEVAELALLEESFEANIRDYTKIIDGYGKQNRLQDAENTLSAMKRRGFICDQ 139
>gb|EMJ21574.1| hypothetical protein PRUPE_ppa018787mg [Prunus persica]
Length = 377
Score = 79.0 bits (193), Expect = 6e-13
Identities = 35/52 (67%), Positives = 45/52 (86%)
Frame = -2
Query: 156 LKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSRGFTCDQ 1
L+VAE+++L ESFE N+RDYTKIIHGY KQNR++EA +L +MK+RGF CDQ
Sbjct: 113 LQVAEIAVLEESFEVNLRDYTKIIHGYGKQNRIEEAVKILSNMKARGFICDQ 164
>ref|XP_006445236.1| hypothetical protein CICLE_v10020287mg [Citrus clementina]
gi|568875716|ref|XP_006490938.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g01970-like [Citrus sinensis]
gi|557547498|gb|ESR58476.1| hypothetical protein
CICLE_v10020287mg [Citrus clementina]
Length = 423
Score = 78.6 bits (192), Expect = 8e-13
Identities = 36/52 (69%), Positives = 45/52 (86%)
Frame = -2
Query: 156 LKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSRGFTCDQ 1
L+VAEL+LL ESFEAN+RDYTKIIHGY K+ +++ AE+ LL+MK RGF CDQ
Sbjct: 154 LQVAELALLEESFEANIRDYTKIIHGYGKKMQIQNAENTLLAMKRRGFICDQ 205
>gb|EXB52663.1| hypothetical protein L484_022440 [Morus notabilis]
Length = 406
Score = 77.0 bits (188), Expect = 2e-12
Identities = 37/51 (72%), Positives = 44/51 (86%)
Frame = -2
Query: 153 KVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSRGFTCDQ 1
+VAE++LL ESFEAN+RDYTKIIH Y KQNRL++AE LL+MKSRGF DQ
Sbjct: 143 QVAEVALLEESFEANIRDYTKIIHCYGKQNRLEDAEKTLLAMKSRGFIRDQ 193
>ref|NP_171699.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264110|sp|Q9LPC4.1|PPR1_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g01970 gi|8570448|gb|AAF76475.1|AC020622_9 Contains
similarity to an unknown protein gi|AAD26479 from
Arabidopsis thaliana BAC gb|AC007169 and contains
multiple PPR PF|01535 repeats [Arabidopsis thaliana]
gi|34098825|gb|AAQ56795.1| At1g01970 [Arabidopsis
thaliana] gi|110735700|dbj|BAE99830.1| hypothetical
protein [Arabidopsis thaliana]
gi|332189240|gb|AEE27361.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 409
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/66 (59%), Positives = 47/66 (71%)
Frame = -2
Query: 198 LNNLTNKFQFQQKILKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSR 19
L NL + F +KVAE SLL +SFEAN RDYTKIIH Y K N++++AE LLSMK+R
Sbjct: 140 LKNLDSPFY-----IKVAEFSLLQDSFEANARDYTKIIHYYGKLNQVEDAERTLLSMKNR 194
Query: 18 GFTCDQ 1
GF DQ
Sbjct: 195 GFLIDQ 200
>ref|XP_002892034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297337876|gb|EFH68293.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 409
Score = 73.6 bits (179), Expect = 3e-11
Identities = 39/66 (59%), Positives = 47/66 (71%)
Frame = -2
Query: 198 LNNLTNKFQFQQKILKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSR 19
L NL + F +KVAE SLL +SFEAN RDYTKIIH Y K N++++AE LLSMK+R
Sbjct: 140 LKNLDSPFY-----IKVAEFSLLEDSFEANARDYTKIIHYYGKLNQVEDAERTLLSMKNR 194
Query: 18 GFTCDQ 1
GF DQ
Sbjct: 195 GFLIDQ 200
>ref|XP_006418475.1| hypothetical protein EUTSA_v10007755mg [Eutrema salsugineum]
gi|557096246|gb|ESQ36828.1| hypothetical protein
EUTSA_v10007755mg [Eutrema salsugineum]
Length = 414
Score = 72.8 bits (177), Expect = 5e-11
Identities = 38/66 (57%), Positives = 47/66 (71%)
Frame = -2
Query: 198 LNNLTNKFQFQQKILKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSR 19
L NL + F +KVAE SLL +SFEAN RDYTKIIH Y K N++++AE LL+MK+R
Sbjct: 145 LKNLESPFY-----IKVAEFSLLEDSFEANARDYTKIIHYYGKLNQVEDAEKTLLAMKNR 199
Query: 18 GFTCDQ 1
GF DQ
Sbjct: 200 GFLVDQ 205
>ref|XP_004134345.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like [Cucumis sativus]
gi|449480346|ref|XP_004155867.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g01970-like [Cucumis sativus]
Length = 404
Score = 72.8 bits (177), Expect = 5e-11
Identities = 34/52 (65%), Positives = 42/52 (80%)
Frame = -2
Query: 156 LKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSRGFTCDQ 1
++VAE +L +FEAN RDYTKIIH Y KQN+L++AE VLLSM+ RGF CDQ
Sbjct: 145 IQVAEAALEEITFEANTRDYTKIIHHYGKQNQLEDAEKVLLSMRERGFVCDQ 196
>ref|XP_004492640.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g01970-like isoform X1 [Cicer arietinum]
gi|502104764|ref|XP_004492641.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g01970-like isoform X2 [Cicer arietinum]
Length = 425
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/52 (61%), Positives = 43/52 (82%)
Frame = -2
Query: 156 LKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSRGFTCDQ 1
L+VAE +LL ESFE N+RDYTK+IH Y+K+N+L+ AE++ +MK RGF CDQ
Sbjct: 166 LEVAEHALLEESFEPNLRDYTKLIHYYSKENQLEAAENIFTTMKQRGFICDQ 217
>gb|AFK47264.1| unknown [Lotus japonicus]
Length = 414
Score = 70.5 bits (171), Expect = 2e-10
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = -2
Query: 156 LKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSRGFTCDQ 1
L+VAE +LL ESFE N+RDYT IIH K N+L+EAE++L +MK RGF CDQ
Sbjct: 155 LEVAEHALLEESFEVNIRDYTNIIHYCGKHNQLEEAENILTAMKQRGFICDQ 206
>ref|XP_006307695.1| hypothetical protein CARUB_v10009324mg [Capsella rubella]
gi|482576406|gb|EOA40593.1| hypothetical protein
CARUB_v10009324mg [Capsella rubella]
Length = 404
Score = 68.9 bits (167), Expect = 7e-10
Identities = 34/52 (65%), Positives = 41/52 (78%)
Frame = -2
Query: 156 LKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSRGFTCDQ 1
+KVAE SLL +SFEAN RDYTKIIH Y K N+++EAE LL+MK+R F DQ
Sbjct: 144 IKVAEFSLLEDSFEANARDYTKIIHFYGKLNQVEEAERTLLAMKNRLFPIDQ 195
>ref|XP_003623723.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498738|gb|AES79941.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 426
Score = 68.9 bits (167), Expect = 7e-10
Identities = 31/52 (59%), Positives = 42/52 (80%)
Frame = -2
Query: 156 LKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSRGFTCDQ 1
L+VAE +L+ ESFE N+RDYTK+IH Y+K+N+L+ AE++ MK RGF CDQ
Sbjct: 165 LEVAEHALVEESFEPNLRDYTKLIHYYSKENQLEAAENIFTLMKQRGFICDQ 216
>ref|XP_002320730.1| hypothetical protein POPTR_0014s06610g [Populus trichocarpa]
gi|222861503|gb|EEE99045.1| hypothetical protein
POPTR_0014s06610g [Populus trichocarpa]
Length = 407
Score = 68.6 bits (166), Expect = 8e-10
Identities = 33/52 (63%), Positives = 40/52 (76%)
Frame = -2
Query: 156 LKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSRGFTCDQ 1
L+V E++LL ESFEANVRDYTKIIH Y N+L+EAE L+M+ RGF DQ
Sbjct: 152 LEVVEIALLEESFEANVRDYTKIIHFYGMNNQLEEAERTRLAMEERGFVSDQ 203
>ref|XP_006826257.1| hypothetical protein AMTR_s00004p00026400 [Amborella trichopoda]
gi|548830571|gb|ERM93494.1| hypothetical protein
AMTR_s00004p00026400 [Amborella trichopoda]
Length = 404
Score = 68.2 bits (165), Expect = 1e-09
Identities = 31/52 (59%), Positives = 41/52 (78%)
Frame = -2
Query: 159 ILKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSRGFTCD 4
I +V E +LL ESFEAN+RDYTK+I GYAKQ R ++AE+ L ++ RGF+CD
Sbjct: 145 IFEVMEFALLQESFEANIRDYTKLIDGYAKQGRKQDAENALGALNRRGFSCD 196
>gb|EPS65198.1| hypothetical protein M569_09579 [Genlisea aurea]
Length = 436
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/52 (63%), Positives = 42/52 (80%)
Frame = -2
Query: 156 LKVAELSLLAESFEANVRDYTKIIHGYAKQNRLKEAESVLLSMKSRGFTCDQ 1
L+VAE +L E+FEA VRDYTK+IH YA++++L+EAE L SMKS GF CDQ
Sbjct: 147 LEVAEHALSEETFEAGVRDYTKLIHFYARRDQLREAERTLESMKSDGFVCDQ 198