BLASTX nr result
ID: Atropa21_contig00028508
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00028508 (2573 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo s... 135 7e-29 ref|XP_006340877.1| PREDICTED: probable histone-lysine N-methylt... 134 2e-28 ref|XP_004247781.1| PREDICTED: probable histone-lysine N-methylt... 126 4e-26 emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] 113 5e-22 gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subc... 112 1e-21 ref|XP_004301658.1| PREDICTED: uncharacterized protein LOC101293... 107 3e-20 emb|CAE04807.2| OSJNBb0022P19.2 [Oryza sativa Japonica Group] 103 3e-19 gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays] 103 4e-19 ref|XP_006342680.1| PREDICTED: probable histone-lysine N-methylt... 103 5e-19 ref|XP_004253015.1| PREDICTED: probable histone-lysine N-methylt... 102 6e-19 ref|XP_002489303.1| hypothetical protein SORBIDRAFT_0010s005460 ... 102 1e-18 gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subc... 100 4e-18 gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] 100 5e-18 gb|AAX96544.1| retrotransposon protein, putative, Ty1-copia sub-... 99 9e-18 emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus] 99 9e-18 gb|AAS07202.1| putative integrase [Oryza sativa Japonica Group] ... 99 9e-18 dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica ... 99 1e-17 gb|AAK39592.1|AC025296_27 putative retrotransposon polyprotein [... 99 1e-17 gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subc... 99 1e-17 gb|ABB46939.2| retrotransposon protein, putative, Ty1-copia subc... 99 1e-17 >gb|ADN33807.1| ty1-copia retrotransposon protein [Cucumis melo subsp. melo] Length = 1038 Score = 135 bits (341), Expect = 7e-29 Identities = 76/171 (44%), Positives = 103/171 (60%), Gaps = 2/171 (1%) Frame = -2 Query: 2431 RVNIGS*TFDTVFIGYTQNSVAY*FMSLNDHSICESRDAEFF*HVFPLKIDVPSDMQNNV 2252 + +G TFD +FI Y QNS AY FM LND +I ESRD EFF HVFPLK + + +N Sbjct: 706 KTTVGPKTFDCIFIEYAQNSAAYRFMCLNDKTINESRDVEFFEHVFPLKQSLYAPSLSNR 765 Query: 2251 FTSMSVNSH--VVPSFDVIAIEHENEHRMSERRIIETSFSPDFITTFLTENFDIDALNDE 2078 + S V + D + E E + S+R+ E SF PDF++TF+ E D ++ Sbjct: 766 MHDPEIVSETPVSETVDTPNLSCELEPKRSKRQRTEKSFGPDFLSTFIVER--RDEIDCN 823 Query: 2077 LVAIYLMEEDPKTYDEAMELIVAIF*KEAIKSELDSIVSNHTWDLYDMPKG 1925 + L++EDPKTY EA+ + + KEAIKSELDS+ NHTW+L D+P G Sbjct: 824 FTNLLLIDEDPKTYQEALNSVDSSMWKEAIKSELDSLAMNHTWELVDLPIG 874 >ref|XP_006340877.1| PREDICTED: probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9-like [Solanum tuberosum] Length = 696 Score = 134 bits (338), Expect = 2e-28 Identities = 78/132 (59%), Positives = 94/132 (71%), Gaps = 20/132 (15%) Frame = +3 Query: 3 YSEFNRT------------QHFRDVGVV--EHQDSRVEVVEDPDSHASVP-DNNDTQVSE 137 YSE+NR Q + DV VV ++QDS EV+EDPD+ A VP NNDTQV+E Sbjct: 104 YSEYNRISEMFKEAFTKKMQRYGDVEVVGNQNQDSADEVMEDPDARAIVPVSNNDTQVAE 163 Query: 138 IVIARKQYTQRSPELVRVTDLKPEGQSYHQDAVRKTRMLCDSLRIL-----ENNQHLGPH 302 +V+AR++Y QRS ELVRVTDLK E Q Y +DAVRKTRML DSLRIL + +QHLGP+ Sbjct: 164 VVVARRKYQQRSAELVRVTDLKVEDQLYFRDAVRKTRMLYDSLRILAMVEDDGSQHLGPY 223 Query: 303 RRRRGDLKACQI 338 R+ RGDLKACQI Sbjct: 224 RKPRGDLKACQI 235 >ref|XP_004247781.1| PREDICTED: probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9-like isoform 1 [Solanum lycopersicum] gi|460404626|ref|XP_004247782.1| PREDICTED: probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9-like isoform 2 [Solanum lycopersicum] Length = 696 Score = 126 bits (317), Expect = 4e-26 Identities = 75/132 (56%), Positives = 92/132 (69%), Gaps = 20/132 (15%) Frame = +3 Query: 3 YSEFNRT------------QHFRDVGVV--EHQDSRVEVVEDPDSHASVP-DNNDTQVSE 137 YSE+NR Q + DV VV ++QDS V+ED D+ A VP NNDTQV+E Sbjct: 104 YSEYNRISEMFKEAFTEKMQRYGDVEVVGNQNQDSVDVVMEDADARAIVPVSNNDTQVAE 163 Query: 138 IVIARKQYTQRSPELVRVTDLKPEGQSYHQDAVRKTRMLCDSLRIL-----ENNQHLGPH 302 +V+AR++Y QRS ELVRVTDLK E Q Y ++AVRKTRML DSLRIL + +QHLGP+ Sbjct: 164 VVVARRKYQQRSSELVRVTDLKVEDQLYFREAVRKTRMLYDSLRILAMVEDDGSQHLGPY 223 Query: 303 RRRRGDLKACQI 338 R+ RGDLKACQI Sbjct: 224 RKPRGDLKACQI 235 >emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera] Length = 1316 Score = 113 bits (282), Expect = 5e-22 Identities = 73/208 (35%), Positives = 102/208 (49%), Gaps = 7/208 (3%) Frame = -2 Query: 2431 RVNIGS*TFDTVFIGYTQNSVAY*FM-------SLNDHSICESRDAEFF*HVFPLKIDVP 2273 +V IG T D +FIGY NS AY F+ ++ ++I ESR+A FF VFP K Sbjct: 709 KVKIGPKTIDCIFIGYAHNSNAYRFLVYESNIPDIHKNTIMESRNASFFEDVFPCKSKEE 768 Query: 2272 SDMQNNVFTSMSVNSHVVPSFDVIAIEHENEHRMSERRIIETSFSPDFITTFLTENFDID 2093 + S N V E E R S+R E SF PDF+T Sbjct: 769 PSSSKRMLESQDQNEEV-----------EVEPRRSKRVRTEKSFGPDFLT---------- 807 Query: 2092 ALNDELVAIYLMEEDPKTYDEAMELIVAIF*KEAIKSELDSIVSNHTWDLYDMPKGYXXX 1913 +++E +P+T+ EA+ + KEAIKSE+DSI+ NHTW+L D+P G Sbjct: 808 ---------FMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCKPL 858 Query: 1912 XXXXXXXXKLRPDGTIDSSKARFLIRGF 1829 K++ DG+ID KAR +I+G+ Sbjct: 859 SSKWIFKRKMKVDGSIDKYKARLVIKGY 886 >gb|ABF95851.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1075 Score = 112 bits (279), Expect = 1e-21 Identities = 72/205 (35%), Positives = 104/205 (50%), Gaps = 7/205 (3%) Frame = -2 Query: 2422 IGS*TFDTVFIGYTQNSVAY*FM-------SLNDHSICESRDAEFF*HVFPLKIDVPSDM 2264 +G T D VFIGY QNS+AY F+ + ++++ ESRD FF FPLK+ PS Sbjct: 578 LGPKTVDCVFIGYAQNSLAYRFLVVKSETTEVRENTVMESRDTTFFEDTFPLKVKSPSSE 637 Query: 2263 QNNVFTSMSVNSHVVPSFDVIAIEHENEHRMSERRIIETSFSPDFITTFLTENFDIDALN 2084 +V +S++S + R S+R E +F DFI Sbjct: 638 PISVEPRISISS-----------DDSLNLRRSKRSRTEKTFGDDFI-------------- 672 Query: 2083 DELVAIYLMEEDPKTYDEAMELIVAIF*KEAIKSELDSIVSNHTWDLYDMPKGYXXXXXX 1904 IYL+++ P T EA A + KEA++SE+DSI+SN TW++ +P+GY Sbjct: 673 -----IYLVDDVPSTLSEAFASAEAAYWKEAVQSEMDSILSNGTWEITHLPQGYRAIGYR 727 Query: 1903 XXXXXKLRPDGTIDSSKARFLIRGF 1829 KL+PDGTID KAR + +G+ Sbjct: 728 AIGCKKLKPDGTIDKFKARLVAKGY 752 >ref|XP_004301658.1| PREDICTED: uncharacterized protein LOC101293311 [Fragaria vesca subsp. vesca] Length = 1096 Score = 107 bits (267), Expect = 3e-20 Identities = 72/208 (34%), Positives = 104/208 (50%), Gaps = 7/208 (3%) Frame = -2 Query: 2431 RVNIGS*TFDTVFIGYTQNSVAY*FMSLN-------DHSICESRDAEFF*HVFPLKIDVP 2273 R IG T D VF+GY +S A F+ +N +++I E RDA +F +FP K + Sbjct: 473 RKKIGPKTVDAVFLGYAHHSTANKFLVINSEIEEISNNTIKECRDATYFEDIFPFKSRIQ 532 Query: 2272 SDMQNNVFTSMSVNSHVVPSFDVIAIEHENEHRMSERRIIETSFSPDFITTFLTENFDID 2093 + N V ++ S ++ + V E E R S+R E +F DF+ Sbjct: 533 NQTVNRVISNASKDTASSSNPAVEETESLEEIRRSKRMRKEKNFGEDFV----------- 581 Query: 2092 ALNDELVAIYLMEEDPKTYDEAMELIVAIF*KEAIKSELDSIVSNHTWDLYDMPKGYXXX 1913 ++ +E DP TY EAM A F KEAI SE++SI+ NHTW+L ++P G Sbjct: 582 --------VFHIEGDPATYKEAMASSDAPFWKEAINSEVESILQNHTWELTNLPPGTRPI 633 Query: 1912 XXXXXXXXKLRPDGTIDSSKARFLIRGF 1829 KL+PDG+ID KAR + +GF Sbjct: 634 GCKWVFRKKLKPDGSIDKYKARLVAKGF 661 >emb|CAE04807.2| OSJNBb0022P19.2 [Oryza sativa Japonica Group] Length = 1099 Score = 103 bits (258), Expect = 3e-19 Identities = 73/222 (32%), Positives = 107/222 (48%), Gaps = 20/222 (9%) Frame = -2 Query: 2422 IGS*TFDTVFIGYTQNSVAY*FMSLNDH-------SICESRDAEFF*HVFPLKIDVPSDM 2264 +G T D VFIGY +SV Y F+ +N +I ESRDA FF + FP+K + Sbjct: 597 LGPNTVDCVFIGYAIHSVGYRFLIVNSRVLDMHVGTILESRDATFFENEFPMKHTPSTSS 656 Query: 2263 QNNVFTSMSVNSHVVPSFDVIAIEHENEH-------------RMSERRIIETSFSPDFIT 2123 Q V +P + IEH ++ R S+R+ + SF D+I Sbjct: 657 QETV----------MPHENFAPIEHNDQTSEKNPEEDNIVDTRKSKRQRVAKSFGDDYI- 705 Query: 2122 TFLTENFDIDALNDELVAIYLMEEDPKTYDEAMELIVAIF*KEAIKSELDSIVSNHTWDL 1943 +YLM++ P+T +EA + A + KEA++SE+DSI+SN TW++ Sbjct: 706 ------------------VYLMDDTPRTIEEAYSSLDANYWKEAVRSEMDSIISNGTWEV 747 Query: 1942 YDMPKGYXXXXXXXXXXXKLRPDGTIDSSKARFLIRGF*LKE 1817 + P G KLRPDGTI+ KAR + +G+ KE Sbjct: 748 VERPYGCKSVGCKWVFKKKLRPDGTIEKYKARLVTKGYTQKE 789 >gb|AAM22635.1|AF434192_2 Gag and Pol [Zea mays] Length = 1264 Score = 103 bits (257), Expect = 4e-19 Identities = 75/216 (34%), Positives = 112/216 (51%), Gaps = 14/216 (6%) Frame = -2 Query: 2422 IGS*TFDTVFIGYTQNSVAY*FMSLNDH-------SICESRDAEFF*HVFPLKIDVPSDM 2264 +G T D VF+GY S+AY F+ + +I ESRDA FF H+FP+K D+ S Sbjct: 637 LGPRTVDCVFLGYASCSIAYRFLVVKSEVPDVYVDTIMESRDATFFEHIFPMK-DIHS-- 693 Query: 2263 QNNVFTSMSVNSHVVP--SFD----VIAIEHENEH-RMSERRIIETSFSPDFITTFLTEN 2105 N+ ++S + H P SF+ ++ E +N+ + S+R+ +E SF DFI Sbjct: 694 -NSRYSSEIIPEHNTPIESFEQPHEIVLEEDDNDAPKRSKRQRVEKSFGDDFI------- 745 Query: 2104 FDIDALNDELVAIYLMEEDPKTYDEAMELIVAIF*KEAIKSELDSIVSNHTWDLYDMPKG 1925 +YL+++ P T EA A KEA+ +E+DSI+SN TW++ D P G Sbjct: 746 ------------VYLVDDTPTTIAEAFASSDADDWKEAVHNEMDSILSNGTWEITDRPYG 793 Query: 1924 YXXXXXXXXXXXKLRPDGTIDSSKARFLIRGF*LKE 1817 KL+PDGTI+ KAR + +G+ KE Sbjct: 794 CKPVGCKWVFKKKLKPDGTIEKYKARLVAKGYTQKE 829 >ref|XP_006342680.1| PREDICTED: probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9-like [Solanum tuberosum] Length = 662 Score = 103 bits (256), Expect = 5e-19 Identities = 63/121 (52%), Positives = 77/121 (63%), Gaps = 9/121 (7%) Frame = +3 Query: 3 YSEFNRTQHFRDVGVVE--HQDSRVEVVEDPDSHASVPDNNDTQVSEIVIARKQYTQRSP 176 +SE+NR + +D VE ED A VP +N+ QVS+IVI R++Y +RS Sbjct: 82 HSEYNRISELFQTAFAQSLQRDGDVEANEDSGCRAIVPVSNE-QVSDIVITRRKYEKRSS 140 Query: 177 ELVRVTDLKPEGQSYHQDAVRKTRMLCDSLRIL-----ENNQHLGPHR--RRRGDLKACQ 335 ELVRVTDLKPE + Y +D +RKTRML DSLRI ENNQHLG R R RGDLKA Q Sbjct: 141 ELVRVTDLKPEDERYFRDLIRKTRMLYDSLRIFVNLEDENNQHLGSGRQTRARGDLKASQ 200 Query: 336 I 338 + Sbjct: 201 M 201 >ref|XP_004253015.1| PREDICTED: probable histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH9-like [Solanum lycopersicum] Length = 665 Score = 102 bits (255), Expect = 6e-19 Identities = 62/121 (51%), Positives = 76/121 (62%), Gaps = 9/121 (7%) Frame = +3 Query: 3 YSEFNRTQHFRDVGVVE--HQDSRVEVVEDPDSHASVPDNNDTQVSEIVIARKQYTQRSP 176 +SE+NR + +D VE ED A VP +N +QVS+IVI R++Y +RS Sbjct: 84 HSEYNRISELFQTAFAQSVQRDGDVEANEDLGCRAIVPVSNGSQVSDIVITRRKYEKRSS 143 Query: 177 ELVRVTDLKPEGQSYHQDAVRKTRMLCDSLRIL-----ENNQHLGPHR--RRRGDLKACQ 335 ELVRVTDLKPE Y +D +RKTRML DSLRI EN+QHLG R R RGDLKA Q Sbjct: 144 ELVRVTDLKPEDVRYFRDLIRKTRMLYDSLRIFVNLEDENSQHLGSGRQTRARGDLKASQ 203 Query: 336 I 338 + Sbjct: 204 M 204 >ref|XP_002489303.1| hypothetical protein SORBIDRAFT_0010s005460 [Sorghum bicolor] gi|241946951|gb|EES20096.1| hypothetical protein SORBIDRAFT_0010s005460 [Sorghum bicolor] Length = 699 Score = 102 bits (253), Expect = 1e-18 Identities = 73/215 (33%), Positives = 108/215 (50%), Gaps = 13/215 (6%) Frame = -2 Query: 2422 IGS*TFDTVFIGYTQNSVAY*FMSLNDHS-------ICESRDAEFF*HVFPLKIDVPSDM 2264 IG T D VF+ Y +SV Y F+ +N ++ + ESRDA FF + FP+KI PS + Sbjct: 68 IGPKTVDCVFLDYAIHSVGYRFLIINSNAPDMAVGTVMESRDATFFENEFPMKIGAPS-V 126 Query: 2263 QNNVFTSMSVNSHVVPSFDVIAIEHENEH------RMSERRIIETSFSPDFITTFLTENF 2102 ++ S +S++ + +E +E R S+R+ + SF DFI Sbjct: 127 SSHDSVPESHDSNIHADDNTHELEQNSEEADNTVTRRSKRQRVAKSFGEDFI-------- 178 Query: 2101 DIDALNDELVAIYLMEEDPKTYDEAMELIVAIF*KEAIKSELDSIVSNHTWDLYDMPKGY 1922 IYL+++ P T EA + KEA++SE+DSI+SN TW++ D P G Sbjct: 179 -----------IYLVDDTPTTISEAYSSSDSDMWKEAVQSEMDSIMSNGTWEVVDRPFGC 227 Query: 1921 XXXXXXXXXXXKLRPDGTIDSSKARFLIRGF*LKE 1817 KLRPDGTI+ KAR + +G+ KE Sbjct: 228 KPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKE 262 >gb|ABA99813.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1448 Score = 100 bits (248), Expect = 4e-18 Identities = 70/216 (32%), Positives = 105/216 (48%), Gaps = 14/216 (6%) Frame = -2 Query: 2422 IGS*TFDTVFIGYTQNSVAY*FMSLNDH-------SICESRDAEFF*HVFPLKIDVPSDM 2264 +G T D VF+GY +SV Y F+ +N +I ESRDA FF + FP+K + Sbjct: 820 LGPKTVDCVFLGYAIHSVGYRFLIVNSGVPDMHAGTILESRDATFFENEFPMKYTPSTSS 879 Query: 2263 QNNVFTSMSVNSHVVPSFDVIAIEHEN-------EHRMSERRIIETSFSPDFITTFLTEN 2105 + V + H P EN + R S+R+ + SF D+I Sbjct: 880 KETVMP----HEHFAPIEHNDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYI------- 928 Query: 2104 FDIDALNDELVAIYLMEEDPKTYDEAMELIVAIF*KEAIKSELDSIVSNHTWDLYDMPKG 1925 +YL+++ P+T +EA + A + KEA++SE+DSI+SN TW++ + P G Sbjct: 929 ------------VYLVDDTPRTIEEAYSSLDADYWKEAVRSEMDSIMSNGTWEVVERPYG 976 Query: 1924 YXXXXXXXXXXXKLRPDGTIDSSKARFLIRGF*LKE 1817 KLRPDGTI+ KAR + +G+ KE Sbjct: 977 CKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKE 1012 >gb|AAR13298.1| gag-pol polyprotein [Phaseolus vulgaris] Length = 1290 Score = 99.8 bits (247), Expect = 5e-18 Identities = 70/203 (34%), Positives = 99/203 (48%), Gaps = 5/203 (2%) Frame = -2 Query: 2422 IGS*TFDTVFIGYTQNSVAY*FMSLND-----HSICESRDAEFF*HVFPLKIDVPSDMQN 2258 IGS T D +F+GY ++S AY F+ LN ++I E+++AEFF H+FPLK S+ Sbjct: 674 IGSKTSDCMFLGYAEHSAAYRFLVLNSDIIERNTIVETKNAEFFEHIFPLKSSGTSEQP- 732 Query: 2257 NVFTSMSVNSHVVPSFDVIAIEHENEHRMSERRIIETSFSPDFITTFLTENFDIDALNDE 2078 D ++ + R S+R+ ETSF DF T Sbjct: 733 ---------------IDSVSDTLSEDVRRSKRQRKETSFGNDFYT--------------- 762 Query: 2077 LVAIYLMEEDPKTYDEAMELIVAIF*KEAIKSELDSIVSNHTWDLYDMPKGYXXXXXXXX 1898 YL+E DP ++ EA A +AIK+EL+SI N+TW L D+PKG Sbjct: 763 ----YLVENDPISFVEATSAPDAKHWDKAIKTELESIKKNNTWTLVDLPKGAKPIGCKWI 818 Query: 1897 XXXKLRPDGTIDSSKARFLIRGF 1829 K PDG+I+ KAR + +GF Sbjct: 819 FKKKYHPDGSIEKYKARLVAKGF 841 >gb|AAX96544.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] gi|77550433|gb|ABA93230.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1321 Score = 99.0 bits (245), Expect = 9e-18 Identities = 73/222 (32%), Positives = 105/222 (47%), Gaps = 20/222 (9%) Frame = -2 Query: 2422 IGS*TFDTVFIGYTQNSVAY*FMSLNDH-------SICESRDAEFF*HVFPLKIDVPSDM 2264 +G T D VF+GY +SV Y F+ +N +I ESRDA FF + FP+K Sbjct: 710 LGPKTVDCVFLGYAIHSVGYRFLIVNSGVPDMHAGTIFESRDATFFDNEFPMKYT----- 764 Query: 2263 QNNVFTSMSVNSHVVPSFDVIAIEHENEH-------------RMSERRIIETSFSPDFIT 2123 S S V+P IEH +E R S+R+ + SF D+I Sbjct: 765 -----PSTSSKETVMPHEHFAPIEHNDETPEENPEEDNIVDTRKSKRQRVAKSFGDDYI- 818 Query: 2122 TFLTENFDIDALNDELVAIYLMEEDPKTYDEAMELIVAIF*KEAIKSELDSIVSNHTWDL 1943 +YL+++ P+T +EA A + KEA++SE+DSI+SN TW++ Sbjct: 819 ------------------VYLVDDTPRTIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEV 860 Query: 1942 YDMPKGYXXXXXXXXXXXKLRPDGTIDSSKARFLIRGF*LKE 1817 + P G KLRPDGTI+ KAR + +G+ KE Sbjct: 861 VERPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKE 902 >emb|CAX68207.1| Copia-like retrotransposon [Helianthus annuus] Length = 1358 Score = 99.0 bits (245), Expect = 9e-18 Identities = 69/204 (33%), Positives = 101/204 (49%) Frame = -2 Query: 2428 VNIGS*TFDTVFIGYTQNSVAY*FMSLNDHSICESRDAEFF*HVFPLKIDVPSDMQNNVF 2249 + +G F +VFIGY +S +Y + + ESRD EFF + K + N Sbjct: 733 LKLGERAFKSVFIGYASHSKSYRLLDDESGIVVESRDVEFFEN----KFSRDDENSNGTT 788 Query: 2248 TSMSVNSHVVPSFDVIAIEHENEHRMSERRIIETSFSPDFITTFLTENFDIDALNDELVA 2069 TS + V PS V E R S R E S+ DF + +L E + + + A Sbjct: 789 TSSTSEKRVQPSPIV------EEPRKSTRVRKEKSYGDDFFS-YLVEGTQKKVMREVIFA 841 Query: 2068 IYLMEEDPKTYDEAMELIVAIF*KEAIKSELDSIVSNHTWDLYDMPKGYXXXXXXXXXXX 1889 + L ++DPKT++EAM A KEA+ E+DSI+ N TW+L D+PKG Sbjct: 842 VNL-DDDPKTFNEAMSSRDAPLWKEAVNDEMDSIMGNGTWELADLPKGKKPIGSKWIFKR 900 Query: 1888 KLRPDGTIDSSKARFLIRGF*LKE 1817 K PDG+I + KAR + +G+ +E Sbjct: 901 KYHPDGSISAYKARLVAKGYRQRE 924 >gb|AAS07202.1| putative integrase [Oryza sativa Japonica Group] gi|108708916|gb|ABF96711.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1456 Score = 99.0 bits (245), Expect = 9e-18 Identities = 70/216 (32%), Positives = 105/216 (48%), Gaps = 14/216 (6%) Frame = -2 Query: 2422 IGS*TFDTVFIGYTQNSVAY*FMSLNDH-------SICESRDAEFF*HVFPLKIDVPSDM 2264 +G T D VF+GY +SV Y F+ +N +I ESRDA FF + FP+K + Sbjct: 828 LGPKTVDCVFLGYAIHSVGYRFLIVNSGVPDMHAGTILESRDATFFENEFPMKYTPSTSS 887 Query: 2263 QNNVFTSMSVNSHVVPSFDVIAIEHEN-------EHRMSERRIIETSFSPDFITTFLTEN 2105 + V + H P + EN + R S+R+ + SF D+I Sbjct: 888 KETVMP----HEHFAPIEHDDQMPEENPEEDNIVDTRKSKRQRVAKSFGDDYI------- 936 Query: 2104 FDIDALNDELVAIYLMEEDPKTYDEAMELIVAIF*KEAIKSELDSIVSNHTWDLYDMPKG 1925 +YL+++ P+T +EA A + KEA++SE+DSI+SN TW++ + P G Sbjct: 937 ------------VYLVDDTPRTIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEVVERPYG 984 Query: 1924 YXXXXXXXXXXXKLRPDGTIDSSKARFLIRGF*LKE 1817 KLRPDGTI+ KAR + +G+ KE Sbjct: 985 CKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKE 1020 >dbj|BAC65862.1| hypothetical polyprotein [Oryza sativa Japonica Group] Length = 1268 Score = 98.6 bits (244), Expect = 1e-17 Identities = 71/216 (32%), Positives = 104/216 (48%), Gaps = 14/216 (6%) Frame = -2 Query: 2422 IGS*TFDTVFIGYTQNSVAY*FMSLNDH-------SICESRDAEFF*HVFPLKIDVPSDM 2264 +G T D VF+GY +SV Y F+ +N +I ESRDA FF + FP+K + Sbjct: 640 LGPKTVDCVFLGYAIHSVGYRFLIVNSGVPDMRVGTITESRDATFFENEFPMKNAPSTSS 699 Query: 2263 QNNVFTSMSVNSHVVPSFDVIAIEHENEH-------RMSERRIIETSFSPDFITTFLTEN 2105 Q + + H VP + EN R S+R+ SF D+I Sbjct: 700 QEPILSP----EHFVPIEHIDQTLEENPEEDNIVATRKSKRQRTAKSFGDDYI------- 748 Query: 2104 FDIDALNDELVAIYLMEEDPKTYDEAMELIVAIF*KEAIKSELDSIVSNHTWDLYDMPKG 1925 +YL+++ P+T +EA A + KEA++SE+DSI+SN TW++ + P G Sbjct: 749 ------------VYLVDDTPRTIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEVVERPYG 796 Query: 1924 YXXXXXXXXXXXKLRPDGTIDSSKARFLIRGF*LKE 1817 KLRPDGTI+ KAR + +G+ KE Sbjct: 797 CKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKE 832 >gb|AAK39592.1|AC025296_27 putative retrotransposon polyprotein [Oryza sativa Japonica Group] Length = 804 Score = 98.6 bits (244), Expect = 1e-17 Identities = 72/222 (32%), Positives = 106/222 (47%), Gaps = 20/222 (9%) Frame = -2 Query: 2422 IGS*TFDTVFIGYTQNSVAY*FMSLNDH-------SICESRDAEFF*HVFPLKIDVPSDM 2264 +G T D VF+GY +SV Y F+ +N +I ESRDA FF + FP+K Sbjct: 176 LGPKTVDCVFLGYAIHSVGYRFLIVNSGVPDMHAGTILESRDATFFENEFPMKYT----- 230 Query: 2263 QNNVFTSMSVNSHVVPSFDVIAIEHENEH-------------RMSERRIIETSFSPDFIT 2123 S S V+P IEH+++ R S+R+ + SF D+I Sbjct: 231 -----PSTSSKETVMPHEHFAPIEHDDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYI- 284 Query: 2122 TFLTENFDIDALNDELVAIYLMEEDPKTYDEAMELIVAIF*KEAIKSELDSIVSNHTWDL 1943 +YL+++ P+T +EA A + KEA++SE+DSI+SN TW++ Sbjct: 285 ------------------VYLVDDTPRTIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEV 326 Query: 1942 YDMPKGYXXXXXXXXXXXKLRPDGTIDSSKARFLIRGF*LKE 1817 + P G KLRPDGTI+ KAR + +G+ KE Sbjct: 327 VEHPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKE 368 >gb|ABG66192.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group] Length = 1457 Score = 98.6 bits (244), Expect = 1e-17 Identities = 72/222 (32%), Positives = 106/222 (47%), Gaps = 20/222 (9%) Frame = -2 Query: 2422 IGS*TFDTVFIGYTQNSVAY*FMSLNDH-------SICESRDAEFF*HVFPLKIDVPSDM 2264 +G T D VF+GY +SV Y F+ +N +I ESRDA FF + FP+K Sbjct: 829 LGPKTVDCVFLGYAIHSVGYRFLIVNSGVPDMHAGTILESRDATFFENEFPMKYT----- 883 Query: 2263 QNNVFTSMSVNSHVVPSFDVIAIEHENEH-------------RMSERRIIETSFSPDFIT 2123 S S V+P IEH+++ R S+R+ + SF D+I Sbjct: 884 -----PSTSSKETVMPHEHFAPIEHDDQTPEENPEEDNIVDTRKSKRQRVAKSFGDDYI- 937 Query: 2122 TFLTENFDIDALNDELVAIYLMEEDPKTYDEAMELIVAIF*KEAIKSELDSIVSNHTWDL 1943 +YL+++ P+T +EA A + KEA++SE+DSI+SN TW++ Sbjct: 938 ------------------VYLVDDTPRTIEEAYSSPDADYWKEAVRSEMDSIMSNGTWEV 979 Query: 1942 YDMPKGYXXXXXXXXXXXKLRPDGTIDSSKARFLIRGF*LKE 1817 + P G KLRPDGTI+ KAR + +G+ KE Sbjct: 980 VEHPYGCKPVGCKWVFKKKLRPDGTIEKYKARLVAKGYTQKE 1021 >gb|ABB46939.2| retrotransposon protein, putative, Ty1-copia subclass, expressed [Oryza sativa Japonica Group] Length = 1085 Score = 98.6 bits (244), Expect = 1e-17 Identities = 70/219 (31%), Positives = 106/219 (48%), Gaps = 14/219 (6%) Frame = -2 Query: 2431 RVNIGS*TFDTVFIGYTQNSVAY*FMSLNDH-------SICESRDAEFF*HVFPLKIDVP 2273 + +G T D VF+GY +SV Y F+ +N +I ESRDA FF + FP+K + Sbjct: 647 KCKLGQKTVDCVFLGYAIHSVGYRFLIVNSRVPNMRVGTITESRDATFFENEFPMKNALS 706 Query: 2272 SDMQNNVFTSMSVNSHVVPSFDVIAIEHENEH-------RMSERRIIETSFSPDFITTFL 2114 + Q + + H VP + + EN R S+R+ SF D+I Sbjct: 707 TSSQEPILSP----EHFVPIEHIDQMLEENPEEDNIVATRKSKRQRTAKSFGDDYI---- 758 Query: 2113 TENFDIDALNDELVAIYLMEEDPKTYDEAMELIVAIF*KEAIKSELDSIVSNHTWDLYDM 1934 +YL+++ P+T +EA + A + KEA+ SE+DSI+SN TW++ + Sbjct: 759 ---------------VYLVDDTPRTIEEAYSSLDADYWKEAVCSEMDSIMSNGTWEVAER 803 Query: 1933 PKGYXXXXXXXXXXXKLRPDGTIDSSKARFLIRGF*LKE 1817 P G KLR DGTI+ KAR + +G+ KE Sbjct: 804 PYGCKPVGCKWVFKKKLRSDGTIEKYKARLVAKGYTQKE 842