BLASTX nr result

ID: Atropa21_contig00027929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00027929
         (884 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]          73   4e-18
ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578...    70   1e-09
ref|XP_006338203.1| PREDICTED: transmembrane 9 superfamily membe...    43   3e-07

>gb|AAL30109.1| unknown [Solanum phureja x Solanum stenotomum]
          Length = 126

 Score = 72.8 bits (177), Expect(2) = 4e-18
 Identities = 36/60 (60%), Positives = 48/60 (80%)
 Frame = -1

Query: 716 ILIQLNLLEDYVKMMFTLAYYLKVYDRDF*MRPLIWDPWFSPKEETSRAVAWISFPELPL 537
           ILI+L+LLEDY  +M + A+ L+V +R F +R L WDPWF+P+EET+ A+AWISFP LPL
Sbjct: 66  ILIRLSLLEDYATLM-SKAWELRVRNRYFPLRFLKWDPWFNPEEETTIAIAWISFPGLPL 124



 Score = 45.8 bits (107), Expect(2) = 4e-18
 Identities = 21/56 (37%), Positives = 30/56 (53%)
 Frame = -3

Query: 882 WNSTKIQQMIINDKLQYTVIGKFPYDNIDIKELCKGIPNHFGIKEVPIIGLLDDRH 715
           W   + +++ +   LQY V+ KF Y   D+ EL K IP    IK    IG L++RH
Sbjct: 10  WTKKEFEKLTVRQNLQYAVVAKFSYGRPDLYELRKAIPIQLEIKGPCNIGFLEERH 65


>ref|XP_006367861.1| PREDICTED: uncharacterized protein LOC102578882, partial [Solanum
           tuberosum]
          Length = 606

 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 32/62 (51%), Positives = 43/62 (69%)
 Frame = -1

Query: 716 ILIQLNLLEDYVKMMFTLAYYLKVYDRDF*MRPLIWDPWFSPKEETSRAVAWISFPELPL 537
           +LI+ +LLEDYVK++    +Y+      + MR L WDP F P+EET+ A+AWISFP LP 
Sbjct: 82  VLIRASLLEDYVKLLSKPQFYITHNHWSYPMRTLKWDPLFDPEEETTTAIAWISFPSLPP 141

Query: 536 NF 531
           NF
Sbjct: 142 NF 143


>ref|XP_006338203.1| PREDICTED: transmembrane 9 superfamily member 4-like [Solanum
           tuberosum]
          Length = 1068

 Score = 43.1 bits (100), Expect(2) = 3e-07
 Identities = 21/31 (67%), Positives = 23/31 (74%)
 Frame = -3

Query: 534 FFAREEVFSMATFVGKTLTVDSATTNRTRPS 442
           FF RE VFS+A  VGK L VD AT N+TRPS
Sbjct: 24  FFGREVVFSLAVAVGKPLQVDMATRNQTRPS 54



 Score = 38.5 bits (88), Expect(2) = 3e-07
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = -1

Query: 599 FSPKEETSRAVAWISFPELPLNF 531
           F+P+E+T+ A+AWISFP LP NF
Sbjct: 2   FNPEEKTTTAIAWISFPALPPNF 24


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