BLASTX nr result
ID: Atropa21_contig00027881
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00027881 (466 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004238595.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 60 2e-07 ref|XP_006367294.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho... 56 6e-06 >ref|XP_004238595.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Solanum lycopersicum] Length = 860 Score = 60.5 bits (145), Expect = 2e-07 Identities = 41/92 (44%), Positives = 47/92 (51%), Gaps = 5/92 (5%) Frame = -1 Query: 262 ERVNDDEREVKRESRKNEPEVXXXXXXXXXXXXXXXXXE----AGDIKDDK-ERSRRNKG 98 E+VNDD+ KRESRK E +V GD+KDDK E+SRRN+G Sbjct: 120 EQVNDDD---KRESRKQETQVDDDGDDDERDDRRKKRRRHEGEGGDLKDDKKEKSRRNEG 176 Query: 97 XXXXXXXXXXXXXXXEKVHKRRKDEHGYRDRV 2 EKVHKRRKDEHG RDRV Sbjct: 177 ESNGRKERRRREDDDEKVHKRRKDEHGLRDRV 208 >ref|XP_006367294.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Solanum tuberosum] Length = 951 Score = 55.8 bits (133), Expect = 6e-06 Identities = 39/89 (43%), Positives = 47/89 (52%), Gaps = 2/89 (2%) Frame = -1 Query: 262 ERVNDDEREVKRESRKNEPEVXXXXXXXXXXXXXXXXXE-AGDIKDDK-ERSRRNKGXXX 89 E+VND++ KRESRK E +V GD+KDDK ERSRRN+G Sbjct: 214 EQVNDND---KRESRKEETQVDDDDERDDRRKKRRRHEGEGGDLKDDKKERSRRNEGESN 270 Query: 88 XXXXXXXXXXXXEKVHKRRKDEHGYRDRV 2 EKVHKRRK+E G+RDRV Sbjct: 271 DRKERRQREDDDEKVHKRRKNELGHRDRV 299