BLASTX nr result

ID: Atropa21_contig00027813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00027813
         (720 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006338134.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   333   3e-89
ref|XP_004237986.1| PREDICTED: uncharacterized protein LOC101252...   293   3e-77
ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    86   2e-14
emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]    86   2e-14
gb|EOY15433.1| Ubiquitin-specific protease 16, putative isoform ...    81   3e-13
gb|EOY15432.1| Ubiquitin-specific protease 16, putative isoform ...    81   3e-13
ref|XP_006578260.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    62   2e-07
ref|XP_006578259.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    62   2e-07
ref|XP_003523774.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    62   2e-07
ref|XP_003527871.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    59   2e-06
ref|XP_004501631.1| PREDICTED: ubiquitin carboxyl-terminal hydro...    59   2e-06
ref|XP_003602929.1| Ubiquitin carboxyl-terminal hydrolase [Medic...    58   3e-06

>ref|XP_006338134.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Solanum
            tuberosum]
          Length = 1165

 Score =  333 bits (854), Expect = 3e-89
 Identities = 163/229 (71%), Positives = 174/229 (75%), Gaps = 1/229 (0%)
 Frame = +3

Query: 3    PRIMRSFTIPRDSRRSKQLTCKSRSHTRSPWDSSHSDSAGQTCNECSYPIHTSVRPSRSI 182
            PRIMRS TIPRD RRSKQ TCKSRSHTRSPWDSSH DS  +TCNEC+YP HTSVRP RSI
Sbjct: 937  PRIMRSLTIPRDPRRSKQPTCKSRSHTRSPWDSSHGDSTSKTCNECAYPSHTSVRPIRSI 996

Query: 183  FEDDNSSEQSSFFSELGSCSTDSTNRDSMSTDDLNIDIFGESGGCWNXXXXXXXXXXXXX 362
            FE+D SSEQSSFFSELGSCSTDSTNRDS STDDLNIDIFG+SG CWN             
Sbjct: 997  FEEDTSSEQSSFFSELGSCSTDSTNRDSTSTDDLNIDIFGDSGVCWNSLWRSSSDSDTSS 1056

Query: 363  XXXXXXXXXXXXXXLADLDRYASGHEESSCS-DAETAGDGQGFWTGLPDRNGYTGVPESN 539
                          LA+LDRYAS HEE+SCS + ETAGDGQGFWTGL DRNGYTG+PE++
Sbjct: 1057 SSSSPSPLYSRHSPLANLDRYASAHEETSCSGNPETAGDGQGFWTGLHDRNGYTGIPETS 1116

Query: 540  GRTPSLCPNSTKHCRKLVXXXXXXXXXXXRLGRVNPCDKSKSPVTCRDR 686
            GRTP LCPN TKHCRK+V           RLGRVNPCDKSKSPVTCRDR
Sbjct: 1117 GRTPPLCPNPTKHCRKVVSSHSSSKTDSSRLGRVNPCDKSKSPVTCRDR 1165


>ref|XP_004237986.1| PREDICTED: uncharacterized protein LOC101252175 [Solanum
            lycopersicum]
          Length = 1158

 Score =  293 bits (751), Expect = 3e-77
 Identities = 150/229 (65%), Positives = 159/229 (69%), Gaps = 1/229 (0%)
 Frame = +3

Query: 3    PRIMRSFTIPRDSRRSKQLTCKSRSHTRSPWDSSHSDSAGQTCNECSYPIHTSVRPSRSI 182
            PRIMRS               KSRSHTRSPWDSSH DS  +TC  CSYP HTSVRP RSI
Sbjct: 944  PRIMRSL--------------KSRSHTRSPWDSSHGDSTSKTCKGCSYPSHTSVRPIRSI 989

Query: 183  FEDDNSSEQSSFFSELGSCSTDSTNRDSMSTDDLNIDIFGESGGCWNXXXXXXXXXXXXX 362
            FE+D+SSEQSSFFSELGSCSTDSTNRDS STDDLNIDIFG+SG CWN             
Sbjct: 990  FEEDSSSEQSSFFSELGSCSTDSTNRDSTSTDDLNIDIFGDSGVCWNSLWRSSSDSDTSS 1049

Query: 363  XXXXXXXXXXXXXXLADLDRYASGHEESSCS-DAETAGDGQGFWTGLPDRNGYTGVPESN 539
                          LADLDRYAS  EE+SCS + ETAGDGQGFWTGL DRN YTGVPE++
Sbjct: 1050 SSSSPSPLYSRHSPLADLDRYASAREETSCSVNPETAGDGQGFWTGLRDRNSYTGVPETS 1109

Query: 540  GRTPSLCPNSTKHCRKLVXXXXXXXXXXXRLGRVNPCDKSKSPVTCRDR 686
            GRTP LCPN TKHCRK+V           RLGRVNPCDKSKSPVTCRDR
Sbjct: 1110 GRTPPLCPNPTKHCRKVVSSHSSSNTDSSRLGRVNPCDKSKSPVTCRDR 1158


>ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
            vinifera]
          Length = 1213

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 72/208 (34%), Positives = 92/208 (44%), Gaps = 7/208 (3%)
 Frame = +3

Query: 78   HTRSPWDSSHSDSAGQTCNECSYPIHTSVRPSRSIFEDDNSSEQSSFFSELGSCSTDSTN 257
            H+RSP D   S        E  Y   T     + I E D+SS+ SS F+E GSCST+S N
Sbjct: 1011 HSRSPVDCPASF-------ESFYSEETRFPWKQRIVEADSSSDNSSLFTEEGSCSTES-N 1062

Query: 258  RDSMSTDDLNIDIFGESGGCWNXXXXXXXXXXXXXXXXXXXXXXXXXXXLADLDRYASGH 437
            RDS ST+DL+  IFG SG  W+                           LA+L+RY+S  
Sbjct: 1063 RDSTSTEDLSDYIFGYSGRGWS-----SPWTNSSDSDTSSSSSSLRSSPLAELNRYSSCS 1117

Query: 438  EESSCSDAETAG---DGQGFWTGLPDRNGYTGVPESNGRTPSLCPNSTKHCRKLV----X 596
             E+S S  + A    +G GFW   P+ +      E  G  P L  +  K CRKLV     
Sbjct: 1118 TETSHSQTDKAKLVMEGDGFWARPPNGSSKLVDMEGKGDIPFLLSDIAKPCRKLVSNSSS 1177

Query: 597  XXXXXXXXXXRLGRVNPCDKSKSPVTCR 680
                      ++GRVNP D  K  V  R
Sbjct: 1178 DSYCKETDKEKVGRVNPLDSMKLGVPSR 1205


>emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]
          Length = 1225

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 72/208 (34%), Positives = 92/208 (44%), Gaps = 7/208 (3%)
 Frame = +3

Query: 78   HTRSPWDSSHSDSAGQTCNECSYPIHTSVRPSRSIFEDDNSSEQSSFFSELGSCSTDSTN 257
            H+RSP D   S        E  Y   T     + I E D+SS+ SS F+E GSCST+S N
Sbjct: 1023 HSRSPVDCPASF-------ESFYSEETRFPWKQRIVEADSSSDNSSLFTEEGSCSTES-N 1074

Query: 258  RDSMSTDDLNIDIFGESGGCWNXXXXXXXXXXXXXXXXXXXXXXXXXXXLADLDRYASGH 437
            RDS ST+DL+  IFG SG  W+                           LA+L+RY+S  
Sbjct: 1075 RDSTSTEDLSDYIFGYSGRGWS-----SPWTNSSDSDTSSSSSSLRSSPLAELNRYSSCS 1129

Query: 438  EESSCSDAETAG---DGQGFWTGLPDRNGYTGVPESNGRTPSLCPNSTKHCRKLV----X 596
             E+S S  + A    +G GFW   P+ +      E  G  P L  +  K CRKLV     
Sbjct: 1130 TETSHSQTDKAKLVMEGDGFWARPPNGSSKLVDMEGKGDIPFLLSDIAKPCRKLVSNSSS 1189

Query: 597  XXXXXXXXXXRLGRVNPCDKSKSPVTCR 680
                      ++GRVNP D  K  V  R
Sbjct: 1190 DSYCKETDKEKVGRVNPLDSMKLGVPSR 1217


>gb|EOY15433.1| Ubiquitin-specific protease 16, putative isoform 2 [Theobroma cacao]
          Length = 1139

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 73/234 (31%), Positives = 99/234 (42%), Gaps = 6/234 (2%)
 Frame = +3

Query: 3    PRIMRSFTIPRDSRRSKQLTCKSRSHTRSPWDSSHSDSAGQTCNECSYPIHTSVRPSRSI 182
            PR++RS      SR + +   KS S T S  D S+  S           +++   P + I
Sbjct: 908  PRLIRSRNKTIPSRVNSKNLSKSSSSTHSSLDESYPSSIHPDFPGSIESLYSKYNPLQRI 967

Query: 183  FEDDNSSEQSSFFS---ELGSCSTDSTNRDSMSTDDLNIDIFGESGGCWNXXXXXXXXXX 353
             E+D+SS+ SS FS   + GSC TDST RDS S DD    +FG+S   WN          
Sbjct: 968  SEEDSSSDSSSLFSSNSDEGSCCTDST-RDSTSADDFLDSVFGDSIRGWNSPWRSSDSDA 1026

Query: 354  XXXXXXXXXXXXXXXXXLADLDRYASGHEESSCSDAE---TAGDGQGFWTGLPDRNGYTG 524
                             LADLDRYASG  E+  S  E   +A +           +G   
Sbjct: 1027 SSSSSSSPLYSRHSP--LADLDRYASGSPETCGSQVEYTDSAAENVPLDRRPSGSSGRQK 1084

Query: 525  VPESNGRTPSLCPNSTKHCRKLVXXXXXXXXXXXRLGRVNPCDKSKSPVTCRDR 686
              E  G  P    +++K CRK +           RLGRVNP +      + R+R
Sbjct: 1085 DEEGKGNHPFFHSDTSKQCRK-IGSSSSRETDSERLGRVNPLNDVSFRRSTRER 1137


>gb|EOY15432.1| Ubiquitin-specific protease 16, putative isoform 1 [Theobroma cacao]
          Length = 1138

 Score = 81.3 bits (199), Expect = 3e-13
 Identities = 73/234 (31%), Positives = 99/234 (42%), Gaps = 6/234 (2%)
 Frame = +3

Query: 3    PRIMRSFTIPRDSRRSKQLTCKSRSHTRSPWDSSHSDSAGQTCNECSYPIHTSVRPSRSI 182
            PR++RS      SR + +   KS S T S  D S+  S           +++   P + I
Sbjct: 907  PRLIRSRNKTIPSRVNSKNLSKSSSSTHSSLDESYPSSIHPDFPGSIESLYSKYNPLQRI 966

Query: 183  FEDDNSSEQSSFFS---ELGSCSTDSTNRDSMSTDDLNIDIFGESGGCWNXXXXXXXXXX 353
             E+D+SS+ SS FS   + GSC TDST RDS S DD    +FG+S   WN          
Sbjct: 967  SEEDSSSDSSSLFSSNSDEGSCCTDST-RDSTSADDFLDSVFGDSIRGWNSPWRSSDSDA 1025

Query: 354  XXXXXXXXXXXXXXXXXLADLDRYASGHEESSCSDAE---TAGDGQGFWTGLPDRNGYTG 524
                             LADLDRYASG  E+  S  E   +A +           +G   
Sbjct: 1026 SSSSSSSPLYSRHSP--LADLDRYASGSPETCGSQVEYTDSAAENVPLDRRPSGSSGRQK 1083

Query: 525  VPESNGRTPSLCPNSTKHCRKLVXXXXXXXXXXXRLGRVNPCDKSKSPVTCRDR 686
              E  G  P    +++K CRK +           RLGRVNP +      + R+R
Sbjct: 1084 DEEGKGNHPFFHSDTSKQCRK-IGSSSSRETDSERLGRVNPLNDVSFRRSTRER 1136


>ref|XP_006578260.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform X3
            [Glycine max]
          Length = 1080

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 42/114 (36%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
 Frame = +3

Query: 3    PRIMRSFTIPRDSRRS---KQLTCKSRSHTRSPWDSSHSDSAGQTCNECSYP-IHTSVRP 170
            PR++R+  +  DS+R    K LT K+RS + +   + H +S+    +  +    ++    
Sbjct: 913  PRLIRNRILSPDSKRKVSGKTLTTKARSISTNSGVAEHVNSSISPDDSPALDSFYSKFHH 972

Query: 171  SRSIFEDDNSSEQSSFFS---ELGSCSTDSTNRDSMSTDDLNIDIFGESGGCWN 323
             + I E+D+SS+ SS  S   + GSCSTDST RDS STDD +  +FG+SG  W+
Sbjct: 973  LKRILEEDSSSDNSSLISSNSDEGSCSTDST-RDSTSTDDFSEYLFGDSGNGWS 1025


>ref|XP_006578259.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform X2
            [Glycine max]
          Length = 1138

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 42/114 (36%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
 Frame = +3

Query: 3    PRIMRSFTIPRDSRRS---KQLTCKSRSHTRSPWDSSHSDSAGQTCNECSYP-IHTSVRP 170
            PR++R+  +  DS+R    K LT K+RS + +   + H +S+    +  +    ++    
Sbjct: 913  PRLIRNRILSPDSKRKVSGKTLTTKARSISTNSGVAEHVNSSISPDDSPALDSFYSKFHH 972

Query: 171  SRSIFEDDNSSEQSSFFS---ELGSCSTDSTNRDSMSTDDLNIDIFGESGGCWN 323
             + I E+D+SS+ SS  S   + GSCSTDST RDS STDD +  +FG+SG  W+
Sbjct: 973  LKRILEEDSSSDNSSLISSNSDEGSCSTDST-RDSTSTDDFSEYLFGDSGNGWS 1025


>ref|XP_003523774.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like isoform X1
            [Glycine max]
          Length = 1063

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 42/114 (36%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
 Frame = +3

Query: 3    PRIMRSFTIPRDSRRS---KQLTCKSRSHTRSPWDSSHSDSAGQTCNECSYP-IHTSVRP 170
            PR++R+  +  DS+R    K LT K+RS + +   + H +S+    +  +    ++    
Sbjct: 913  PRLIRNRILSPDSKRKVSGKTLTTKARSISTNSGVAEHVNSSISPDDSPALDSFYSKFHH 972

Query: 171  SRSIFEDDNSSEQSSFFS---ELGSCSTDSTNRDSMSTDDLNIDIFGESGGCWN 323
             + I E+D+SS+ SS  S   + GSCSTDST RDS STDD +  +FG+SG  W+
Sbjct: 973  LKRILEEDSSSDNSSLISSNSDEGSCSTDST-RDSTSTDDFSEYLFGDSGNGWS 1025


>ref|XP_003527871.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
            max]
          Length = 1125

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
 Frame = +3

Query: 3    PRIMRSFTIPRDSRRS---KQLTCKSRSHTRSPWDSSHSDSAGQTCNECSYP-IHTSVRP 170
            PR++R+  +  DS+     K LT K+R  + +   S H++S+  + +  +    ++    
Sbjct: 910  PRLIRNRILSPDSKSKVSGKTLTTKARYISTNSGVSEHANSSISSDDSPALASFYSKFHH 969

Query: 171  SRSIFEDDNSSEQSSFFS---ELGSCSTDSTNRDSMSTDDLNIDIFGESGGCWN 323
             + I E+D+SS+ SS  S   + GSCSTDST RDS +TDD +  +FG+SG  W+
Sbjct: 970  LKRILEEDSSSDNSSLISSNSDEGSCSTDST-RDSTNTDDFSEYLFGDSGNGWS 1022


>ref|XP_004501631.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Cicer
            arietinum]
          Length = 1129

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 43/114 (37%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
 Frame = +3

Query: 3    PRIMRSFTIPRDSR---RSKQLTCKSR-SHTRSPWDSSHSDSAGQTCNECSYPIHTSVRP 170
            P+++R+  +  DS+     K LT K R   + S    S S S     +      ++    
Sbjct: 897  PKLIRNRILSPDSKSKVNGKSLTTKPRFMSSNSGAAESISSSISPDGSPTLESFYSKFHH 956

Query: 171  SRSIFEDDNSSEQSSFFS---ELGSCSTDSTNRDSMSTDDLNIDIFGESGGCWN 323
             + I E+D+SS+ SS FS   + GSCSTDST RDS STDD +  IFG+SG  W+
Sbjct: 957  LKRILEEDSSSDSSSLFSSNSDEGSCSTDST-RDSTSTDDFSDYIFGDSGHGWS 1009


>ref|XP_003602929.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
            gi|355491977|gb|AES73180.1| Ubiquitin carboxyl-terminal
            hydrolase [Medicago truncatula]
          Length = 1116

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 9/116 (7%)
 Frame = +3

Query: 3    PRIMRSFTIPRDS------RRSKQLTCKSRSHTRSPWDSSHSDSAGQTCNECSYPIHTSV 164
            P+++R+  + +DS      + +K  +  S S    P  SS S     T        ++  
Sbjct: 894  PKLIRNRILSQDSNSKVNGKSTKARSTSSNSGAAEPISSSVSPDGSPTLES----FYSRF 949

Query: 165  RPSRSIFEDDNSSEQSSFFS---ELGSCSTDSTNRDSMSTDDLNIDIFGESGGCWN 323
               + I E+D+SS+ SS FS   + GSCSTDST RDS S DD +  IFG+SG  W+
Sbjct: 950  HHLKKILEEDSSSDSSSLFSSNSDEGSCSTDST-RDSTSMDDFSDYIFGDSGRGWS 1004


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