BLASTX nr result
ID: Atropa21_contig00027778
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00027778
(669 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|YP_817526.1| hypothetical chloroplast RF2 [Coffea arabica] g... 60 8e-07
prf||1211235CA ORF 1708 59 1e-06
ref|NP_064100.1| orf204 gene product (mitochondrion) [Beta vulga... 59 1e-06
gb|AHH30482.1| hypothetical chloroplast RF2 (chloroplast) [Barts... 59 1e-06
ref|YP_008999976.1| hypothetical chloroplast RF21 (chloroplast) ... 59 1e-06
ref|YP_008963735.1| hypothetical chloroplast RF21 (chloroplast) ... 59 1e-06
gb|AFK81537.1| hypothetical chloroplast RF21 [Camellia taliensis] 59 1e-06
gb|AFK81516.1| hypothetical chloroplast RF21 [Camellia taliensis] 59 1e-06
ref|YP_008964078.1| hypothetical chloroplast RF2 [Ajuga reptans]... 59 1e-06
ref|YP_008815248.1| hypothetical chloroplast RF21 (chloroplast) ... 59 1e-06
ref|YP_008815161.1| hypothetical chloroplast RF21 (chloroplast) ... 59 1e-06
ref|YP_008815074.1| hypothetical chloroplast RF21 (chloroplast) ... 59 1e-06
ref|YP_008814987.1| hypothetical chloroplast RF21 (chloroplast) ... 59 1e-06
ref|YP_008814900.1| hypothetical chloroplast RF21 (chloroplast) ... 59 1e-06
gb|AGW04940.1| hypothetical chloroplast protein [Telosma cordata] 59 1e-06
gb|AGW04863.1| hypothetical chloroplast protein [Sisyranthus tri... 59 1e-06
gb|AGW04329.1| hypothetical chloroplast protein [Secamone afzelii] 59 1e-06
ref|YP_008578216.1| Ycf2 (chloroplast) [Stockwellia quadrifida] ... 59 1e-06
ref|YP_008578131.1| Ycf2 (chloroplast) [Allosyncarpia ternata] g... 59 1e-06
ref|YP_008577961.1| Ycf2 (chloroplast) [Angophora floribunda] gi... 59 1e-06
>ref|YP_817526.1| hypothetical chloroplast RF2 [Coffea arabica]
gi|116617170|ref|YP_817543.1| hypothetical chloroplast
RF2 [Coffea arabica] gi|122153663|sp|A0A379.1|YCF2_COFAR
RecName: Full=Protein Ycf2 gi|116242207|gb|ABJ89722.1|
hypothetical chloroplast RF2 [Coffea arabica]
gi|116242226|gb|ABJ89741.1| hypothetical chloroplast RF2
[Coffea arabica]
Length = 2281
Score = 59.7 bits (143), Expect = 8e-07
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +3
Query: 519 LLCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
+LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 1202 ILCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 1235
>prf||1211235CA ORF 1708
Length = 1000
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 629 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 661
>ref|NP_064100.1| orf204 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435124|ref|YP_004222342.1| hypothetical protein
BevumaM_p108 [Beta vulgaris subsp. maritima]
gi|9087350|dbj|BAA99494.1| orf204 [Beta vulgaris subsp.
vulgaris] gi|317905678|emb|CBJ14072.1| hypothetical
protein [Beta vulgaris subsp. maritima]
gi|319439857|emb|CBJ17562.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|384939120|emb|CBL51966.1|
hypothetical protein (mitochondrion) [Beta vulgaris
subsp. maritima]
Length = 204
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 137 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 169
>gb|AHH30482.1| hypothetical chloroplast RF2 (chloroplast) [Bartsia inaequalis]
gi|576598331|gb|AHH30493.1| hypothetical chloroplast RF2
(chloroplast) [Bartsia inaequalis]
Length = 2269
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 1193 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 1225
>ref|YP_008999976.1| hypothetical chloroplast RF21 (chloroplast) [Agrostemma githago]
gi|576303675|ref|YP_008999993.1| hypothetical chloroplast
RF21 (chloroplast) [Agrostemma githago]
gi|555944063|gb|AGZ17967.1| hypothetical chloroplast RF21
(chloroplast) [Agrostemma githago]
gi|555944080|gb|AGZ17984.1| hypothetical chloroplast RF21
(chloroplast) [Agrostemma githago]
Length = 2043
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 959 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 991
>ref|YP_008963735.1| hypothetical chloroplast RF21 (chloroplast) [Liquidambar formosana]
gi|568244972|ref|YP_008963754.1| hypothetical chloroplast
RF21 (chloroplast) [Liquidambar formosana]
gi|491650414|gb|AGL13474.1| hypothetical chloroplast RF21
(chloroplast) [Liquidambar formosana]
gi|491650433|gb|AGL13493.1| hypothetical chloroplast RF21
(chloroplast) [Liquidambar formosana]
Length = 2297
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 1204 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 1236
>gb|AFK81537.1| hypothetical chloroplast RF21 [Camellia taliensis]
Length = 2298
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 1204 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 1236
>gb|AFK81516.1| hypothetical chloroplast RF21 [Camellia taliensis]
Length = 2298
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 1204 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 1236
>ref|YP_008964078.1| hypothetical chloroplast RF2 [Ajuga reptans]
gi|568247135|ref|YP_008964094.1| hypothetical chloroplast
RF2 [Ajuga reptans] gi|558697199|gb|AHA84954.1|
hypothetical chloroplast RF2 [Ajuga reptans]
gi|558697206|gb|AHA84961.1| hypothetical chloroplast RF2
[Ajuga reptans]
Length = 2248
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 1174 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 1206
>ref|YP_008815248.1| hypothetical chloroplast RF21 (chloroplast) [Kalopanax septemlobus]
gi|563940449|ref|YP_008815267.1| hypothetical chloroplast
RF21 (chloroplast) [Kalopanax septemlobus]
gi|458599655|gb|AGG39347.1| hypothetical chloroplast RF21
(chloroplast) [Kalopanax septemlobus]
gi|458599676|gb|AGG39368.1| hypothetical chloroplast RF21
(chloroplast) [Kalopanax septemlobus]
Length = 2116
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 1002 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 1034
>ref|YP_008815161.1| hypothetical chloroplast RF21 (chloroplast) [Schefflera delavayi]
gi|558603152|ref|YP_008815180.1| hypothetical chloroplast
RF21 (chloroplast) [Schefflera delavayi]
gi|458599567|gb|AGG39260.1| hypothetical chloroplast RF21
(chloroplast) [Schefflera delavayi]
gi|458599588|gb|AGG39281.1| hypothetical chloroplast RF21
(chloroplast) [Schefflera delavayi]
Length = 2132
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 1002 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 1034
>ref|YP_008815074.1| hypothetical chloroplast RF21 (chloroplast) [Metapanax delavayi]
gi|558603064|ref|YP_008815093.1| hypothetical chloroplast
RF21 (chloroplast) [Metapanax delavayi]
gi|458599414|gb|AGG39173.1| hypothetical chloroplast RF21
(chloroplast) [Metapanax delavayi]
gi|458599435|gb|AGG39194.1| hypothetical chloroplast RF21
(chloroplast) [Metapanax delavayi]
Length = 2116
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 1002 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 1034
>ref|YP_008814987.1| hypothetical chloroplast RF21 (chloroplast) [Brassaiopsis hainla]
gi|558602976|ref|YP_008815006.1| hypothetical chloroplast
RF21 (chloroplast) [Brassaiopsis hainla]
gi|458599235|gb|AGG39086.1| hypothetical chloroplast RF21
(chloroplast) [Brassaiopsis hainla]
gi|458599256|gb|AGG39107.1| hypothetical chloroplast RF21
(chloroplast) [Brassaiopsis hainla]
Length = 2116
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 1002 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 1034
>ref|YP_008814900.1| hypothetical chloroplast RF21 (chloroplast) [Aralia undulata]
gi|563940343|ref|YP_008814919.1| hypothetical chloroplast
RF21 (chloroplast) [Aralia undulata]
gi|458599133|gb|AGG38999.1| hypothetical chloroplast RF21
(chloroplast) [Aralia undulata]
gi|458599154|gb|AGG39020.1| hypothetical chloroplast RF21
(chloroplast) [Aralia undulata]
Length = 2132
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 1002 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 1034
>gb|AGW04940.1| hypothetical chloroplast protein [Telosma cordata]
Length = 2308
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 1194 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 1226
>gb|AGW04863.1| hypothetical chloroplast protein [Sisyranthus trichostomus]
Length = 2294
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 1191 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 1223
>gb|AGW04329.1| hypothetical chloroplast protein [Secamone afzelii]
Length = 2279
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 1197 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 1229
>ref|YP_008578216.1| Ycf2 (chloroplast) [Stockwellia quadrifida]
gi|545719317|ref|YP_008578235.1| Ycf2 (chloroplast)
[Stockwellia quadrifida] gi|442569464|gb|AGC59625.1| Ycf2
(chloroplast) [Stockwellia quadrifida]
gi|442569483|gb|AGC59644.1| Ycf2 (chloroplast)
[Stockwellia quadrifida]
Length = 2274
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 1201 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 1233
>ref|YP_008578131.1| Ycf2 (chloroplast) [Allosyncarpia ternata]
gi|545719489|ref|YP_008578150.1| Ycf2 (chloroplast)
[Allosyncarpia ternata] gi|442569378|gb|AGC59540.1| Ycf2
(chloroplast) [Allosyncarpia ternata]
gi|442569397|gb|AGC59559.1| Ycf2 (chloroplast)
[Allosyncarpia ternata]
Length = 2280
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 1201 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 1233
>ref|YP_008577961.1| Ycf2 (chloroplast) [Angophora floribunda]
gi|545719145|ref|YP_008577980.1| Ycf2 (chloroplast)
[Angophora floribunda] gi|545719212|ref|YP_008578046.1|
Ycf2 (chloroplast) [Angophora costata]
gi|545719231|ref|YP_008578065.1| Ycf2 (chloroplast)
[Angophora costata] gi|442569206|gb|AGC59370.1| Ycf2
(chloroplast) [Angophora floribunda]
gi|442569225|gb|AGC59389.1| Ycf2 (chloroplast) [Angophora
floribunda] gi|442569292|gb|AGC59455.1| Ycf2
(chloroplast) [Angophora costata]
gi|442569311|gb|AGC59474.1| Ycf2 (chloroplast) [Angophora
costata]
Length = 2280
Score = 58.9 bits (141), Expect = 1e-06
Identities = 26/33 (78%), Positives = 28/33 (84%)
Frame = +3
Query: 522 LCLMKCIEKGQMCRIFQRNGDFSTLSKWNLFQT 620
LCL KC+EKGQM R FQR+ FSTLSKWNLFQT
Sbjct: 1201 LCLKKCVEKGQMYRTFQRDSAFSTLSKWNLFQT 1233