BLASTX nr result
ID: Atropa21_contig00027760
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00027760
(597 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588... 63 7e-08
ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein A... 44 5e-07
ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein A... 43 1e-06
ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein A... 44 1e-06
ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein A... 49 5e-06
ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein A... 56 6e-06
emb|CAN72177.1| hypothetical protein VITISV_012537 [Vitis vinifera] 46 7e-06
>ref|XP_006352585.1| PREDICTED: uncharacterized protein LOC102588593 [Solanum tuberosum]
Length = 255
Score = 62.8 bits (151), Expect = 7e-08
Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 4/151 (2%)
Frame = +1
Query: 133 RRQCFDWKIPRMAKLLHILD*CL*IVKLQILSVGRDKNREFSLLSLATYG*TEKEMIFQN 312
RR DW++ R+A LLH L+ + + + + + + + + +
Sbjct: 30 RRALNDWEVDRVAGLLHTLNAFPGVTESPDTPIWKMHKKGIFSVKSCYWSLNSNQAMEME 89
Query: 313 *PWRKIWKSEAPHNVASFCGNW----HMTLYHAKIFTKGNHIM*KTLLMQQSRRNGSHFF 480
PW+ IWK + PH V+ F W L H I +G I + + + SH F
Sbjct: 90 WPWKLIWKIKIPHKVSGF--TWLAIRKACLTHEVIQRRGIQICSRCFMCGEEAEVNSHLF 147
Query: 481 LQC*VANQLCDMFLSLSKVNCVMPHSVKELL 573
L C A L +MFL + VN VMP + ELL
Sbjct: 148 LHCRTAANLWNMFLCILGVNWVMPKTTLELL 178
>ref|XP_006353602.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 517
Score = 44.3 bits (103), Expect(2) = 5e-07
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Frame = +1
Query: 319 WRKIWKSEAPHNVASFCGNW----HMTLYHAKIFTKGNHIM*KTLLMQQSRRNGSHFFLQ 486
W WK + P V C W L + KG ++ + L + SH FL
Sbjct: 355 WNYFWKGDIPTKVK--CFTWLVIKRACLTQEVLQKKGRQLVPRCFLCNLTSETNSHLFLH 412
Query: 487 C*VANQLCDMFLSLSKVNCVMPHSVKELL 573
C Q+ ++FLS+S +N MP +L
Sbjct: 413 CNYTAQIWNLFLSISNLNWTMPERTSNVL 441
Score = 35.4 bits (80), Expect(2) = 5e-07
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 78 NAEISVHQCWSNRK-ECKHQKTML*LENT*DGQVASYFGLVSLNSEITDSLCWEGQKQGV 254
N + +V CW+ + + ++ + E ++ G V++N+ TD + W+ K G+
Sbjct: 274 NPDANVGDCWTEQGWDLVFRRLLNDWEVERVAEILGMLGGVTINTNATDRMLWKHSKDGL 333
Query: 255 FSVKSGY 275
FSV S Y
Sbjct: 334 FSVNSAY 340
>ref|XP_006345709.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X1 [Solanum tuberosum]
Length = 284
Score = 43.1 bits (100), Expect(2) = 1e-06
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Frame = +1
Query: 319 WRKIWKSEAPHNVASFCGNW----HMTLYHAKIFTKGNHIM*KTLLMQQSRRNGSHFFLQ 486
W WK + P V C W L + KG ++ + L + SH FL
Sbjct: 122 WNYFWKGDIPTKVK--CFTWLVIKRACLTQEVLQKKGRQLVPRCFLCNLTSETNSHLFLH 179
Query: 487 C*VANQLCDMFLSLSKVNCVMPHSVKELL 573
C Q+ ++FL++S +N MP +L
Sbjct: 180 CNYTAQIWNLFLNISNLNWTMPERTSNVL 208
Score = 35.4 bits (80), Expect(2) = 1e-06
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 78 NAEISVHQCWSNRK-ECKHQKTML*LENT*DGQVASYFGLVSLNSEITDSLCWEGQKQGV 254
N + +V CW+ + + ++ + E ++ G V++N+ TD + W+ K G+
Sbjct: 41 NPDANVGDCWTEQGWDLVFRRLLNDWEVERVAEILGMLGGVTINANATDRMLWKHSKDGL 100
Query: 255 FSVKSGY 275
FSV S Y
Sbjct: 101 FSVNSAY 107
>ref|XP_006345710.1| PREDICTED: putative ribonuclease H protein At1g65750-like isoform
X2 [Solanum tuberosum]
Length = 284
Score = 44.3 bits (103), Expect(2) = 1e-06
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 4/89 (4%)
Frame = +1
Query: 319 WRKIWKSEAPHNVASFCGNW----HMTLYHAKIFTKGNHIM*KTLLMQQSRRNGSHFFLQ 486
W WK + P V C W L + KG ++ + L + SH FL
Sbjct: 122 WNYFWKGDIPTKVK--CFTWLVIKRACLTQEVLQKKGRQLVPRCFLCNLTSETNSHLFLH 179
Query: 487 C*VANQLCDMFLSLSKVNCVMPHSVKELL 573
C Q+ ++FLS+S +N MP +L
Sbjct: 180 CNYTAQIWNLFLSISNLNWTMPERTSNVL 208
Score = 33.9 bits (76), Expect(2) = 1e-06
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 78 NAEISVHQCWSNRK-ECKHQKTML*LENT*DGQVASYFGLVSLNSEITDSLCWEGQKQGV 254
N + +V CW+ + + ++ + E ++ G V++N+ TD + W+ K G+
Sbjct: 41 NPDANVGDCWTEQGWDLVFRRLLNDWEVERVAEILGMLGGVTINANATDRMLWKHNKDGL 100
Query: 255 FSVKSGY 275
FS S Y
Sbjct: 101 FSANSAY 107
>ref|XP_006362709.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 217
Score = 48.5 bits (114), Expect(2) = 5e-06
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Frame = +1
Query: 316 PWRKIWKSEAPHNVASFCGNWHMT----LYHAKIFTKGNHIM*KTLLMQQSRRNGSHFFL 483
PWR IW++E P+ V F W + L H + + ++ L ++ +H FL
Sbjct: 54 PWRMIWRTEIPYKVNYF--TWLLAKQAVLTHENLNKRKPNLRSSCYLCEEQVETVNHLFL 111
Query: 484 QC*VANQLCDMFLSLSKVNCVMPHSVKELLLCCGLKG 594
C +QL MF+ K+ P S+ E+L C G
Sbjct: 112 HCKWTDQLWQMFIQKRKIKWTKPGSIIEVLQCWNRDG 148
Score = 27.7 bits (60), Expect(2) = 5e-06
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Frame = +3
Query: 174 VASYFGLVSLNSEIT---DSLCWEGQKQGVFSVKSGY 275
+A + + + + +T D L W+G++ G F+VKS Y
Sbjct: 4 IARFHDTMQMATNLTGEEDRLVWKGERGGEFTVKSAY 40
>ref|XP_006356960.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
tuberosum]
Length = 514
Score = 56.2 bits (134), Expect = 6e-06
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 2/141 (1%)
Frame = +1
Query: 121 NVNIRRQCFDWKIPRMAKLLHILD*CL*IVKLQILSVGRDKNREFSLLSLATYG*TEKEM 300
N+ RR DW+IPR+ L L+ + + + + + +A + E
Sbjct: 319 NIVFRRLLNDWEIPRVTDLFGKLEGFSGLKEEEDSLTWIGGTKAVFSVKIAYNYLMDLEQ 378
Query: 301 IFQN*PWRKIWKSEAPHNVASFCGN--WHMTLYHAKIFTKGNHIM*KTLLMQQSRRNGSH 474
PW++IWK+ AP V F W L H K+ +G H+ + L Q H
Sbjct: 379 FNDPWPWKEIWKARAPFKVVCFTWLVVWKACLTHDKLQRRGFHLCSRCFLCHQEAETNGH 438
Query: 475 FFLQC*VANQLCDMFLSLSKV 537
FL C QL +F +L+++
Sbjct: 439 LFLHCSFTRQLWQLFAALAQI 459
>emb|CAN72177.1| hypothetical protein VITISV_012537 [Vitis vinifera]
Length = 491
Score = 45.8 bits (107), Expect(2) = 7e-06
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = +1
Query: 316 PWRKIWKSEAPHNVASFC--GNWHMTLYHAKIFTKGNHIM*KTLLMQQSRRNGSHFFLQC 489
PWR IW S P V F +W L ++ +G + + L +H + C
Sbjct: 373 PWRIIWSSFVPSKVGFFAWEASWGKVLTQDQLKRRGWKLANRCPLCCDEEETINHILIHC 432
Query: 490 *VANQLCDMFLSLSKVNCVMPHSVKELLL 576
A L D+ SL VN V+P SV++ LL
Sbjct: 433 PKAKVLWDLLFSLFGVNWVIPFSVRDTLL 461
Score = 30.0 bits (66), Expect(2) = 7e-06
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +3
Query: 201 LNSEITDSLCWEGQKQGVFSVKS 269
LN+++ D + W+ K G+FSVKS
Sbjct: 337 LNADLEDRMVWKETKDGIFSVKS 359