BLASTX nr result
ID: Atropa21_contig00027734
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00027734 (768 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258... 94 5e-30 ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A... 86 4e-27 ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A... 79 2e-26 ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261... 82 3e-26 ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A... 88 9e-26 ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A... 75 1e-24 ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601... 87 3e-24 ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A... 84 4e-24 ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268... 73 3e-23 ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A... 84 5e-23 ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A... 75 2e-22 ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A... 76 7e-21 ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260... 79 9e-21 ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein A... 74 1e-20 gb|ABI34321.1| RNase H family protein [Solanum demissum] 104 4e-20 ref|XP_006346670.1| PREDICTED: putative ribonuclease H protein A... 92 2e-16 ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262... 88 3e-15 ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein A... 88 3e-15 ref|XP_004253277.1| PREDICTED: uncharacterized protein LOC101244... 88 4e-15 ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein A... 50 1e-12 >ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum lycopersicum] Length = 1454 Score = 94.0 bits (232), Expect(2) = 5e-30 Identities = 50/145 (34%), Positives = 75/145 (51%) Frame = +2 Query: 14 KYPFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHF 193 K P N + +K+IPFK+ F WR + K P + + R G N S C CC + I H Sbjct: 1095 KDPINNIIWHKQIPFKVSFFIWRALRGKLPTNENLQRIGKNL-SDCYCCYNKGKDDINHI 1153 Query: 194 YVKSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELW 373 + A I + + +G+ I+ DL +W + +YTN V K+++ + P IC LW Sbjct: 1154 LINGNFAKYIWKIYSSAVGVLPINTTLRDLLLQWRNQQYTNEVHKLLIHILPNFICWNLW 1213 Query: 374 KQRCSCKYGSQRKLIVGQMQYGPLK 448 K RC+ KYG + I ++QYG K Sbjct: 1214 KNRCAVKYGLKNSSIY-RVQYGIFK 1237 Score = 64.3 bits (155), Expect(2) = 5e-30 Identities = 38/100 (38%), Positives = 53/100 (53%) Frame = +1 Query: 442 IKAVLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENR 621 I V+ +FPSI W + N+VE+ + K V P G K+NTDGS + + Sbjct: 1239 IMQVITIVFPSIPWQTSWNNLINIVEQCKQHYKILIVKWNKPDLGKYKLNTDGSALQNSG 1298 Query: 622 RAGIGGILRD*QGNMVMAFSITIQCNNNNYTEALTAELEG 741 + G GGILRD QG ++ AFS+ NN+ E + A L G Sbjct: 1299 KIGGGGILRDNQGKIIYAFSLPFGFGTNNFAE-IKAALHG 1337 >ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum lycopersicum] Length = 955 Score = 85.9 bits (211), Expect(2) = 4e-27 Identities = 47/140 (33%), Positives = 70/140 (50%) Frame = +2 Query: 29 NSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVKSE 208 NS+ +K IPFKI F WR + K P + +FG+N C CC + I H + Sbjct: 601 NSVWHKHIPFKISFFIWRALRGKLPTYDYLQKFGSNATD-CYCCNRKGIDDINHILITGN 659 Query: 209 AAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQRCS 388 A+ I Y+ GI I+ L +W + +N V K+++ + P IC LWK C+ Sbjct: 660 FANYIWKYYAPTFGITQINIDLRSLLLQWTNLPSSNQVYKLLISILPNFICWHLWKNMCA 719 Query: 389 CKYGSQRKLIVGQMQYGPLK 448 KYG++ I ++QYG K Sbjct: 720 VKYGNKISSI-QRVQYGIFK 738 Score = 62.8 bits (151), Expect(2) = 4e-27 Identities = 35/85 (41%), Positives = 47/85 (55%) Frame = +1 Query: 463 IFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAGIGGI 642 +FP+I + W ++ NLVE+ + K V P FG K+NTDGS + E+ + G GGI Sbjct: 747 VFPNIPWQHSWYRLINLVEQCQQQLKVIMVSWRKPQFGIYKLNTDGSALPESGKIGGGGI 806 Query: 643 LRD*QGNMVMAFSITIQCNNNNYTE 717 LRD G + AFSI NN E Sbjct: 807 LRDYTGKLHYAFSIPFGLGTNNIAE 831 >ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum lycopersicum] Length = 655 Score = 78.6 bits (192), Expect(2) = 2e-26 Identities = 46/135 (34%), Positives = 65/135 (48%) Frame = +2 Query: 44 KRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVKSEAAHQI 223 K +PFKI F WR K K P + + R G+N S C CC + I H + A I Sbjct: 366 KHLPFKIAFFIWRALKGKLPTNEFLQRIGSNI-SDCSCCYRKGKDDINHILINGNFAKYI 424 Query: 224 *SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQRCSCKYGS 403 LGI ++ W + K N V K+++ + P +IC LWK RC+ KYG Sbjct: 425 WKIHAATLGIIPVNTNLRAQLLHWRNQKVNNEVHKLLIHILPNLICWNLWKNRCAVKYGK 484 Query: 404 QRKLIVGQMQYGPLK 448 +R V +++YG K Sbjct: 485 KRS-NVHRVKYGIFK 498 Score = 67.8 bits (164), Expect(2) = 2e-26 Identities = 37/96 (38%), Positives = 51/96 (53%) Frame = +1 Query: 442 IKAVLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENR 621 + ++ +FPSI +W + N++E K V P FG+ K+NTDGS I + Sbjct: 500 VMQIIKLVFPSIPWQANWNNLVNIIENCSQQYKIVLVSWNKPAFGTYKLNTDGSAIQNSG 559 Query: 622 RAGIGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729 + G GGILRD QG +V AFSI NN+ E A Sbjct: 560 KTGGGGILRDFQGKIVYAFSIPFGVGTNNFAEIKAA 595 >ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum lycopersicum] Length = 1246 Score = 81.6 bits (200), Expect(2) = 3e-26 Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 1/142 (0%) Frame = +2 Query: 26 LNSLLY-KRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVK 202 +N++++ K +PFKI F WR K K P + + RFG+ S C CC + I H + Sbjct: 905 INTIIWHKHLPFKIAFFIWRALKGKLPTNELLQRFGS-AISKCYCCYSKGKDDINHILIN 963 Query: 203 SEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQR 382 A I LG+ + D W + + N V K+++ + P +IC LWK R Sbjct: 964 GNFAKHIWKIHAAILGVVPANTTLRDQLLHWRNQQVNNEVHKLLIHILPNVICWNLWKNR 1023 Query: 383 CSCKYGSQRKLIVGQMQYGPLK 448 C+ KYG++ I ++QYG K Sbjct: 1024 CAVKYGNKSSSI-HRVQYGIFK 1044 Score = 63.9 bits (154), Expect(2) = 3e-26 Identities = 37/96 (38%), Positives = 50/96 (52%) Frame = +1 Query: 442 IKAVLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENR 621 + V+ +FPSI W K+ N+VE + K V P G+ K+NTDGS + + Sbjct: 1046 VMQVIKIVFPSIPWQSSWNKLINIVEHCKQQYKIVLVSWNKPGLGTYKLNTDGSALQNSG 1105 Query: 622 RAGIGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729 + G GGILRD QG +V AFS+ NN E A Sbjct: 1106 KIGGGGILRDHQGKIVYAFSLPFGFGTNNIAEIKAA 1141 >ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum lycopersicum] Length = 468 Score = 88.2 bits (217), Expect(2) = 9e-26 Identities = 47/128 (36%), Positives = 65/128 (50%) Frame = +2 Query: 23 FLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVK 202 F ++L +K IPFK FL WR K K P + +S FG C + + I+H + Sbjct: 111 FNSALWHKFIPFKTSFLLWRTLKGKLPTNEKLSNFGIEPLPCFCCFDRAGMDTIEHIFNS 170 Query: 203 SEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQR 382 A + ++F GIQ P L K+W K N K++LQ TP+ IC LWK R Sbjct: 171 GPFATIVWNFFAATAGIQADHSTLPALIKQWWTTKPNNAGHKLLLQATPIFICWNLWKNR 230 Query: 383 CSCKYGSQ 406 C+CKYG + Sbjct: 231 CACKYGGK 238 Score = 55.8 bits (133), Expect(2) = 9e-26 Identities = 33/89 (37%), Positives = 47/89 (52%) Frame = +1 Query: 451 VLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAG 630 +L FPSI +W + EK K ++V PP +K+NTDGS + + G Sbjct: 256 MLKNSFPSINWPANWTTLILTSEKCVHNIKVYKVTWFKPPDQWIKINTDGSALTNEGKIG 315 Query: 631 IGGILRD*QGNMVMAFSITIQCNNNNYTE 717 GGI+RD +G M+MAFS + +NN E Sbjct: 316 AGGIIRDKEGKMIMAFSTPLGEGSNNQAE 344 >ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum lycopersicum] Length = 389 Score = 75.1 bits (183), Expect(2) = 1e-24 Identities = 40/129 (31%), Positives = 58/129 (44%) Frame = +2 Query: 20 PFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYV 199 P N + +K +PFK F WR + K P + + +FG C CC + ++H + Sbjct: 32 PIHNCVWHKNVPFKTSFFIWRALRSKLPTNENLLKFGKEELE-CYCCYRKGKDDLKHILI 90 Query: 200 KSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQ 379 A I LGI ++ W N V K++L + P IIC LWK Sbjct: 91 TGNFAKYIWKIHTKRLGIAIVNTNLRSTLLSWRRLTSYNEVHKLILHILPNIICWNLWKN 150 Query: 380 RCSCKYGSQ 406 RCS KYG++ Sbjct: 151 RCSAKYGNK 159 Score = 65.1 bits (157), Expect(2) = 1e-24 Identities = 38/100 (38%), Positives = 55/100 (55%) Frame = +1 Query: 442 IKAVLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENR 621 I ++ ++P+I W ++ NLVE+ + K V E PP G K+NTDGS Sbjct: 174 IMQIIKAVYPNIPWQSSWERLFNLVEQCQQHLKVTMVNWERPPEGIHKLNTDGSAKHNTG 233 Query: 622 RAGIGGILRD*QGNMVMAFSITIQCNNNNYTEALTAELEG 741 + G GGILRD QG ++ AF+I + NN+ E + A L G Sbjct: 234 KIGGGGILRDHQGKLIYAFAIPLGFGTNNFAE-IQAALHG 272 >ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum] Length = 2019 Score = 83.2 bits (204), Expect(2) = 3e-24 Identities = 43/126 (34%), Positives = 62/126 (49%) Frame = +2 Query: 41 YKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVKSEAAHQ 220 + +IPFK FL WR + K P + + FG S C CC + I+H + A Sbjct: 897 HPKIPFKCSFLLWRAIRGKLPTNEKLLSFGIEP-SDCHCCHSPGIDTIEHTLNSGDFAKN 955 Query: 221 I*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQRCSCKYG 400 + YF LGI+ P ++ RW + N K++L TP+ IC LWK RC+ KYG Sbjct: 956 VWKYFAISLGIRTDFLPLRNMIMRWWSAPHNNEAHKLILHSTPIFICWNLWKNRCAVKYG 1015 Query: 401 SQRKLI 418 ++ I Sbjct: 1016 GKQSNI 1021 Score = 55.5 bits (132), Expect(2) = 3e-24 Identities = 29/93 (31%), Positives = 47/93 (50%) Frame = +1 Query: 451 VLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAG 630 +L+ +FP I W K CN++E K V PP+ +K+NTDGS ++ G Sbjct: 1035 LLHTVFPYISWPLRWNKFCNVIENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIG 1094 Query: 631 IGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729 G ++R+ G +++A+S + NN E A Sbjct: 1095 AGDVIRNHLGEIILAYSTPLGTGTNNQAEVEAA 1127 Score = 86.7 bits (213), Expect(2) = 3e-17 Identities = 44/132 (33%), Positives = 64/132 (48%) Frame = +2 Query: 23 FLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVK 202 F + +K IPFK FL WR + K P + + FG + CC S + I+H + K Sbjct: 594 FNTFIWHKSIPFKTSFLLWRTLRGKLPTNEKLISFGNEPANCFCCCNRSGLDTIEHTFNK 653 Query: 203 SEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQR 382 + A + F GI P L +W K+ N +++LQ TP+ IC LWK R Sbjct: 654 GQFATYLWKSFAAAAGIITYHNSLPQLIMQWWSTKHNNAAYRLILQATPIFICWNLWKNR 713 Query: 383 CSCKYGSQRKLI 418 C+ KYG ++ I Sbjct: 714 CASKYGGKQSNI 725 Score = 28.5 bits (62), Expect(2) = 3e-17 Identities = 19/62 (30%), Positives = 28/62 (45%) Frame = +1 Query: 451 VLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAG 630 ++ FP IK +W ++ L E+ K V P +K+NTDGS + R G Sbjct: 739 LMTTTFPQIKWPSNWMELLQLGERCTHDTKVTMVKWIKPKKQWVKINTDGSALCNPGRIG 798 Query: 631 IG 636 G Sbjct: 799 AG 800 >ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum lycopersicum] Length = 775 Score = 84.0 bits (206), Expect(2) = 4e-24 Identities = 48/132 (36%), Positives = 66/132 (50%), Gaps = 1/132 (0%) Frame = +2 Query: 14 KYPFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCC-RVSPYEIIQH 190 K FL+ L + IPFK FL WRI K K P + ++ FG S C CC + + I H Sbjct: 415 KNRFLSFLWHNFIPFKTSFLLWRILKGKIPTNEKLTNFGIEP-SPCYCCVDRAGMDSINH 473 Query: 191 FYVKSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*EL 370 + A ++ F G+Q Q K+W K N +++LQ TP+ IC L Sbjct: 474 IFNTGNFAGRVWKSFAAGAGLQQDQQTLQARLKQWWTAKSCNAGHQLLLQATPIFICWNL 533 Query: 371 WKQRCSCKYGSQ 406 WK RC+CKYG + Sbjct: 534 WKNRCACKYGGK 545 Score = 54.3 bits (129), Expect(2) = 4e-24 Identities = 31/93 (33%), Positives = 48/93 (51%) Frame = +1 Query: 451 VLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAG 630 ++ FP I+ W + + EK + K QV PP +K+NTDGS + G Sbjct: 563 MMKNAFPHIQWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGNIG 622 Query: 631 IGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729 GGI+R+ +G +VMAF+ ++ +NN E A Sbjct: 623 AGGIIRNKEGKLVMAFATSLGEGSNNKAETEAA 655 >ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum lycopersicum] Length = 1333 Score = 73.2 bits (178), Expect(2) = 3e-23 Identities = 43/136 (31%), Positives = 64/136 (47%) Frame = +2 Query: 41 YKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVKSEAAHQ 220 +K +PFKI F WR K K P + + R G++ CC + I H + A Sbjct: 983 HKHLPFKIAFFIWRALKGKLPTNEFLQRIGSDISDYS-CCYRKGKDDINHILINGNFAKY 1041 Query: 221 I*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQRCSCKYG 400 I LGI ++ W + + N V K+++ + P IIC LWK RC+ KYG Sbjct: 1042 IWKIHAATLGIIPVNTTLRAQLLHWRNQQVNNEVHKLLIHILPNIICWNLWKNRCAVKYG 1101 Query: 401 SQRKLIVGQMQYGPLK 448 +R I +++YG K Sbjct: 1102 KKRSSI-HRVKYGIFK 1116 Score = 62.4 bits (150), Expect(2) = 3e-23 Identities = 36/96 (37%), Positives = 49/96 (51%) Frame = +1 Query: 442 IKAVLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENR 621 + V+ +FPSI +W + N++E K V P G+ K+NTDGS I + Sbjct: 1118 VMQVIKLVFPSIPWQSNWNNLVNIIEHCSQQYKIVLVSWNKPALGTYKLNTDGSAIQNSG 1177 Query: 622 RAGIGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729 + G GG LRD QG +V AFSI NN+ E A Sbjct: 1178 KIGGGGNLRDFQGKIVYAFSIPFGVGTNNFAEIKAA 1213 >ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum lycopersicum] Length = 775 Score = 84.0 bits (206), Expect(2) = 5e-23 Identities = 48/132 (36%), Positives = 66/132 (50%), Gaps = 1/132 (0%) Frame = +2 Query: 14 KYPFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCC-RVSPYEIIQH 190 K FL+ L + IPFK FL WRI K K P + ++ FG S C CC + + I H Sbjct: 415 KNRFLSFLWHNFIPFKTSFLLWRILKGKIPTNEKLTNFGIEP-SPCYCCVDRAGMDSINH 473 Query: 191 FYVKSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*EL 370 + A ++ F G+Q Q K+W K N +++LQ TP+ IC L Sbjct: 474 IFNTGNFAGRVWKSFAAGAGLQEDQQTLQARLKQWWTAKSCNAGHQLLLQATPIFICWNL 533 Query: 371 WKQRCSCKYGSQ 406 WK RC+CKYG + Sbjct: 534 WKNRCACKYGGK 545 Score = 50.8 bits (120), Expect(2) = 5e-23 Identities = 27/80 (33%), Positives = 44/80 (55%) Frame = +1 Query: 451 VLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAG 630 ++ FP I+ W + + EK + K QV PP +K+NTDGS + + G Sbjct: 563 MMKNAFPHIQWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGKIG 622 Query: 631 IGGILRD*QGNMVMAFSITI 690 GGI+R+ +G +VMAF+ ++ Sbjct: 623 AGGIIRNKEGKLVMAFATSL 642 >ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum lycopersicum] Length = 1010 Score = 74.7 bits (182), Expect(2) = 2e-22 Identities = 39/130 (30%), Positives = 60/130 (46%) Frame = +2 Query: 20 PFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYV 199 P + +K IPFK+ F W+ + K P + ++ FG + + C CC + I H + Sbjct: 653 PINQFIWHKNIPFKVSFFIWKALRNKLPTNDSLMNFGMDEQE-CYCCFRKGKDDILHILI 711 Query: 200 KSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQ 379 A I LG+ L W + N VQK++ Q+ P IC LWK Sbjct: 712 TGNFAKYIWKIHATRLGVHQDHANLRSLLLHWRNIPVHNQVQKLLYQILPNFICWNLWKN 771 Query: 380 RCSCKYGSQR 409 RC+ K+GS++ Sbjct: 772 RCAVKHGSKQ 781 Score = 58.2 bits (139), Expect(2) = 2e-22 Identities = 36/97 (37%), Positives = 50/97 (51%) Frame = +1 Query: 439 TIKAVLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAEN 618 T++AV+ FP+I + + NL E + K +V E P G K+NTDGS I Sbjct: 795 TMQAVM-VAFPNISRQNNLDMLINLAENCQQQVKVTKVMWEKPSLGIFKLNTDGSAIHNI 853 Query: 619 RRAGIGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729 + G GGILRD G ++ AF+I NN+ E A Sbjct: 854 NKIGGGGILRDHNGKLIYAFAIPFGIGTNNFAEMKAA 890 >ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum lycopersicum] Length = 668 Score = 75.9 bits (185), Expect(2) = 7e-21 Identities = 40/131 (30%), Positives = 62/131 (47%) Frame = +2 Query: 14 KYPFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHF 193 K+ F + L + IPFK FL WR+ K K P + +S FG S C + + I+H Sbjct: 311 KHKFNSLLWHNFIPFKSSFLLWRVLKGKLPTNEKLSNFGIEPSSCFCCVDRTGMDSIEHT 370 Query: 194 YVKSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELW 373 + A ++ F G+Q ++W + N +++LQ P+ I LW Sbjct: 371 FNSGSFATRVWRAFTTTAGLQEDQSSVQARLRQWWTARLRNASHQLLLQAMPIFIVWNLW 430 Query: 374 KQRCSCKYGSQ 406 K RC+CKYG + Sbjct: 431 KNRCACKYGGK 441 Score = 51.6 bits (122), Expect(2) = 7e-21 Identities = 30/93 (32%), Positives = 44/93 (47%) Frame = +1 Query: 451 VLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAG 630 +L FP I +W + E+ + K PP +K+NTDGS + G Sbjct: 459 MLKSAFPCINWPGNWAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCG 518 Query: 631 IGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729 GGI+RD +G +V+AF+ + NN EA A Sbjct: 519 AGGIIRDKEGKIVLAFATPLGDGTNNKAEAEAA 551 >ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum lycopersicum] Length = 1531 Score = 79.0 bits (193), Expect(2) = 9e-21 Identities = 45/143 (31%), Positives = 65/143 (45%) Frame = +2 Query: 20 PFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYV 199 P N + + +IPFK+ F WR + K P + + RFG C CC + I H + Sbjct: 1273 PINNIIWHNQIPFKVAFFIWRALRGKLPTNEGVHRFGIAAED-CYCCYQQGKDDINHILL 1331 Query: 200 KSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQ 379 A+ I Y LG+ + W + N V K+++Q+ P IC LWK Sbjct: 1332 TRNFANYIWKYHAAILGVTQLYTNIRSQLMHWRNQHTINEVHKLIMQILPNYICWNLWKN 1391 Query: 380 RCSCKYGSQRKLIVGQMQYGPLK 448 RC KYG + I ++QYG K Sbjct: 1392 RCGVKYGHKTSSI-KRVQYGIFK 1413 Score = 48.1 bits (113), Expect(2) = 9e-21 Identities = 24/57 (42%), Positives = 32/57 (56%) Frame = +1 Query: 559 EMPPFGSLKMNTDGSFIAENRRAGIGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729 + P G K+NTDGS I + + G GGILRD G ++ AFS+ + NN E A Sbjct: 1454 QKPKEGIYKLNTDGSAIQDTGKIGGGGILRDHTGKIIYAFSVPLDFGTNNMAELKAA 1510 >ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum lycopersicum] Length = 601 Score = 73.9 bits (180), Expect(2) = 1e-20 Identities = 43/143 (30%), Positives = 65/143 (45%) Frame = +2 Query: 20 PFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYV 199 P N + +K IPFKI F W K P + + R G + C CC + I H + Sbjct: 244 PINNIIWHKHIPFKISFFIWGALTGKLPTNEILQRLGRDIVD-CYCCYSKVKDDINHILL 302 Query: 200 KSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQ 379 A+ I + +G H++ W + N V K+++ P IIC LW+ Sbjct: 303 TGNFANYIWKKHASTVGALHVNTNMRSQLLYWRSLQTNNEVHKLLIHTLPNIICWNLWEN 362 Query: 380 RCSCKYGSQRKLIVGQMQYGPLK 448 RC+ KYG ++ I ++QYG K Sbjct: 363 RCAVKYGGKQSSIY-RVQYGIFK 384 Score = 52.8 bits (125), Expect(2) = 1e-20 Identities = 31/85 (36%), Positives = 44/85 (51%) Frame = +1 Query: 487 YDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAGIGGILRD*QGNM 666 Y W + N +++ + K + V P G K+NTDGS + EN GGILRD QG++ Sbjct: 401 YSWGHLINFIDQCQQQYKIFMVRWIKPTIGRYKLNTDGSCLQENGNIEGGGILRDHQGSI 460 Query: 667 VMAFSITIQCNNNNYTEALTAELEG 741 + AF+ NN + L A L G Sbjct: 461 IFAFASPFAFGTNNIAK-LKAALYG 484 >gb|ABI34321.1| RNase H family protein [Solanum demissum] Length = 945 Score = 104 bits (259), Expect = 4e-20 Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 3/155 (1%) Frame = +2 Query: 29 NSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVKSE 208 N + + + PFK+ FL WR+ + K PF T+ +F N S CVCC+ E I H ++ S+ Sbjct: 568 NKIWHGKFPFKMSFLTWRLVQNKLPFYDTVGKFVDNIDSNCVCCKNMKTETINHVFLNSD 627 Query: 209 AAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQRCS 388 A + FG LGI +L K W + + N++ +++ P++I E+WK+RC+ Sbjct: 628 VASYLWKKFGGTLGIDTRASSTINLLKTWWNVQTHNSIHNVIIHTLPILIFWEIWKRRCA 687 Query: 389 CKYGSQRKLIVGQMQ---YGPLKLS*TRSFHPLKI 484 CKYG Q+K+ M+ + LK+S +F +I Sbjct: 688 CKYGDQKKMWYRTMENHVWWNLKMSLRMTFPSFEI 722 Score = 79.7 bits (195), Expect = 1e-12 Identities = 44/98 (44%), Positives = 55/98 (56%) Frame = +1 Query: 436 WTIKAVLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAE 615 W +K L FPS + W + N VE LRP KW V P +K+NTDGSF + Sbjct: 707 WNLKMSLRMTFPSFEIGNSWRDLLNKVESLRPYPKWKIVHWNTPNINCVKINTDGSFSSG 766 Query: 616 NRRAGIGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729 N AG+G I+RD M+MAFSI C++NN EAL A Sbjct: 767 N--AGLGWIVRDHTRRMIMAFSIPSSCSSNNLAEALAA 802 >ref|XP_006346670.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum tuberosum] Length = 421 Score = 92.0 bits (227), Expect = 2e-16 Identities = 46/132 (34%), Positives = 69/132 (52%) Frame = +2 Query: 11 PKYPFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQH 190 PK N + ++ IPFK+ FL WR + K P + + FG + C CC S ++ I H Sbjct: 125 PKIKLYNYIWHRHIPFKVSFLLWRALRGKFPTNDKTTTFGV-APAKCSCCIKSGWDTIDH 183 Query: 191 FYVKSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*EL 370 +V A+ I + LG++ P +L KRW +Y N +Q+++ P+II L Sbjct: 184 IFVTGHFANHIWQFHSAMLGVRQDKIPLKNLIKRWWTMEYKNEIQELLYHSMPIIISCNL 243 Query: 371 WKQRCSCKYGSQ 406 WK RCS KYG + Sbjct: 244 WKNRCSAKYGGK 255 >ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262707 [Solanum lycopersicum] Length = 764 Score = 88.2 bits (217), Expect = 3e-15 Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 1/143 (0%) Frame = +2 Query: 23 FLNSLLY-KRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYV 199 ++N++++ K IPFKI F WR K K P + + FG C CC + I H Sbjct: 585 YINTIIWHKYIPFKISFFIWRAIKGKLPTNDNLQIFGKPAEE-CYCCYKQGKDDINHILS 643 Query: 200 KSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQ 379 A+ I Y+ LG+ H+ L W + TN V K + Q+ P IIC LWK Sbjct: 644 TGHFANYIWKYYARKLGVIHLQTNIRSLFILWRNQHATNQVLKTLFQILPNIICWNLWKN 703 Query: 380 RCSCKYGSQRKLIVGQMQYGPLK 448 RC+ KYG++R I ++QYG K Sbjct: 704 RCAVKYGNKRSSI-NRVQYGIYK 725 >ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum lycopersicum] Length = 622 Score = 88.2 bits (217), Expect = 3e-15 Identities = 47/128 (36%), Positives = 64/128 (50%) Frame = +2 Query: 23 FLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVK 202 F ++L +K IPFK FL WR K K P + +S FG C + I+H + Sbjct: 359 FNSALWHKFIPFKTSFLLWRTLKGKLPTNEKLSNFGIEPLPCFCCFDRGGMDTIEHIFNS 418 Query: 203 SEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQR 382 A + ++F GIQ P L K+W K N K++LQ TP+ IC LWK R Sbjct: 419 GPFATIVWNFFAATAGIQADHSTLPALIKQWWTAKPNNAGHKLLLQATPIFICWNLWKNR 478 Query: 383 CSCKYGSQ 406 C+CKYG + Sbjct: 479 CACKYGGK 486 >ref|XP_004253277.1| PREDICTED: uncharacterized protein LOC101244169 [Solanum lycopersicum] Length = 764 Score = 87.8 bits (216), Expect = 4e-15 Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 1/143 (0%) Frame = +2 Query: 23 FLNSLLY-KRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYV 199 ++N++++ K IPFKI F WR + K P + ++ FG C CC + I H Sbjct: 585 YINTIIWHKYIPFKISFFIWRAIRGKLPTNDSLQIFGKPAEE-CYCCYKQGKDDINHILS 643 Query: 200 KSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQ 379 A+ I Y+ LG+ H+ L +W + TN V K + Q+ P IIC LWK Sbjct: 644 TGHFANYIWKYYARKLGVIHLQTNIRSLFIQWRNQHATNQVLKTLFQILPNIICWNLWKN 703 Query: 380 RCSCKYGSQRKLIVGQMQYGPLK 448 RC+ KYG++R I + QYG K Sbjct: 704 RCAVKYGNKRSSI-NRAQYGIYK 725 >ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum lycopersicum] Length = 308 Score = 50.1 bits (118), Expect(2) = 1e-12 Identities = 28/93 (30%), Positives = 46/93 (49%) Frame = +1 Query: 451 VLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAG 630 ++ FP I W + E+ + K +V PP +K+NTDGS + + G Sbjct: 96 MMKNAFPHINWPAHWTALITTSERCKHEIKVCKVTWNRPPEEWIKINTDGSALTNPGKIG 155 Query: 631 IGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729 GGI+RD G +++AF+ ++ +NN E A Sbjct: 156 AGGIIRDKDGKLILAFATSLGEGSNNKAETEAA 188 Score = 49.7 bits (117), Expect(2) = 1e-12 Identities = 24/79 (30%), Positives = 36/79 (45%) Frame = +2 Query: 182 IQHFYVKSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC 361 I H + + A + F G+QH ++W N +++LQ TP+ IC Sbjct: 4 IDHIFSTGKFAGTVWKSFAASAGLQHDQTTLQARLEKWWTANPRNEGHQLLLQATPIFIC 63 Query: 362 *ELWKQRCSCKYGSQRKLI 418 LWK RC+ KYG + I Sbjct: 64 WNLWKNRCASKYGGKATYI 82