BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00027734
         (768 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258...    94   5e-30
ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein A...    86   4e-27
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A...    79   2e-26
ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261...    82   3e-26
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A...    88   9e-26
ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein A...    75   1e-24
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601...    87   3e-24
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A...    84   4e-24
ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268...    73   3e-23
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A...    84   5e-23
ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein A...    75   2e-22
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A...    76   7e-21
ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260...    79   9e-21
ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein A...    74   1e-20
gb|ABI34321.1| RNase H family protein [Solanum demissum]              104   4e-20
ref|XP_006346670.1| PREDICTED: putative ribonuclease H protein A...    92   2e-16
ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262...    88   3e-15
ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein A...    88   3e-15
ref|XP_004253277.1| PREDICTED: uncharacterized protein LOC101244...    88   4e-15
ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein A...    50   1e-12

>ref|XP_004242524.1| PREDICTED: uncharacterized protein LOC101258077 [Solanum
            lycopersicum]
          Length = 1454

 Score = 94.0 bits (232), Expect(2) = 5e-30
 Identities = 50/145 (34%), Positives = 75/145 (51%)
 Frame = +2

Query: 14   KYPFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHF 193
            K P  N + +K+IPFK+ F  WR  + K P +  + R G N  S C CC     + I H 
Sbjct: 1095 KDPINNIIWHKQIPFKVSFFIWRALRGKLPTNENLQRIGKNL-SDCYCCYNKGKDDINHI 1153

Query: 194  YVKSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELW 373
             +    A  I   + + +G+  I+    DL  +W + +YTN V K+++ + P  IC  LW
Sbjct: 1154 LINGNFAKYIWKIYSSAVGVLPINTTLRDLLLQWRNQQYTNEVHKLLIHILPNFICWNLW 1213

Query: 374  KQRCSCKYGSQRKLIVGQMQYGPLK 448
            K RC+ KYG +   I  ++QYG  K
Sbjct: 1214 KNRCAVKYGLKNSSIY-RVQYGIFK 1237



 Score = 64.3 bits (155), Expect(2) = 5e-30
 Identities = 38/100 (38%), Positives = 53/100 (53%)
 Frame = +1

Query: 442  IKAVLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENR 621
            I  V+  +FPSI     W  + N+VE+ +   K   V    P  G  K+NTDGS +  + 
Sbjct: 1239 IMQVITIVFPSIPWQTSWNNLINIVEQCKQHYKILIVKWNKPDLGKYKLNTDGSALQNSG 1298

Query: 622  RAGIGGILRD*QGNMVMAFSITIQCNNNNYTEALTAELEG 741
            + G GGILRD QG ++ AFS+      NN+ E + A L G
Sbjct: 1299 KIGGGGILRDNQGKIIYAFSLPFGFGTNNFAE-IKAALHG 1337


>ref|XP_004233578.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 955

 Score = 85.9 bits (211), Expect(2) = 4e-27
 Identities = 47/140 (33%), Positives = 70/140 (50%)
 Frame = +2

Query: 29   NSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVKSE 208
            NS+ +K IPFKI F  WR  + K P    + +FG+N    C CC     + I H  +   
Sbjct: 601  NSVWHKHIPFKISFFIWRALRGKLPTYDYLQKFGSNATD-CYCCNRKGIDDINHILITGN 659

Query: 209  AAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQRCS 388
             A+ I  Y+    GI  I+     L  +W +   +N V K+++ + P  IC  LWK  C+
Sbjct: 660  FANYIWKYYAPTFGITQINIDLRSLLLQWTNLPSSNQVYKLLISILPNFICWHLWKNMCA 719

Query: 389  CKYGSQRKLIVGQMQYGPLK 448
             KYG++   I  ++QYG  K
Sbjct: 720  VKYGNKISSI-QRVQYGIFK 738



 Score = 62.8 bits (151), Expect(2) = 4e-27
 Identities = 35/85 (41%), Positives = 47/85 (55%)
 Frame = +1

Query: 463  IFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAGIGGI 642
            +FP+I   + W ++ NLVE+ +   K   V    P FG  K+NTDGS + E+ + G GGI
Sbjct: 747  VFPNIPWQHSWYRLINLVEQCQQQLKVIMVSWRKPQFGIYKLNTDGSALPESGKIGGGGI 806

Query: 643  LRD*QGNMVMAFSITIQCNNNNYTE 717
            LRD  G +  AFSI      NN  E
Sbjct: 807  LRDYTGKLHYAFSIPFGLGTNNIAE 831


>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 655

 Score = 78.6 bits (192), Expect(2) = 2e-26
 Identities = 46/135 (34%), Positives = 65/135 (48%)
 Frame = +2

Query: 44  KRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVKSEAAHQI 223
           K +PFKI F  WR  K K P +  + R G+N  S C CC     + I H  +    A  I
Sbjct: 366 KHLPFKIAFFIWRALKGKLPTNEFLQRIGSNI-SDCSCCYRKGKDDINHILINGNFAKYI 424

Query: 224 *SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQRCSCKYGS 403
                  LGI  ++         W + K  N V K+++ + P +IC  LWK RC+ KYG 
Sbjct: 425 WKIHAATLGIIPVNTNLRAQLLHWRNQKVNNEVHKLLIHILPNLICWNLWKNRCAVKYGK 484

Query: 404 QRKLIVGQMQYGPLK 448
           +R   V +++YG  K
Sbjct: 485 KRS-NVHRVKYGIFK 498



 Score = 67.8 bits (164), Expect(2) = 2e-26
 Identities = 37/96 (38%), Positives = 51/96 (53%)
 Frame = +1

Query: 442 IKAVLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENR 621
           +  ++  +FPSI    +W  + N++E      K   V    P FG+ K+NTDGS I  + 
Sbjct: 500 VMQIIKLVFPSIPWQANWNNLVNIIENCSQQYKIVLVSWNKPAFGTYKLNTDGSAIQNSG 559

Query: 622 RAGIGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729
           + G GGILRD QG +V AFSI      NN+ E   A
Sbjct: 560 KTGGGGILRDFQGKIVYAFSIPFGVGTNNFAEIKAA 595


>ref|XP_004248595.1| PREDICTED: uncharacterized protein LOC101261371 [Solanum
            lycopersicum]
          Length = 1246

 Score = 81.6 bits (200), Expect(2) = 3e-26
 Identities = 46/142 (32%), Positives = 71/142 (50%), Gaps = 1/142 (0%)
 Frame = +2

Query: 26   LNSLLY-KRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVK 202
            +N++++ K +PFKI F  WR  K K P +  + RFG+   S C CC     + I H  + 
Sbjct: 905  INTIIWHKHLPFKIAFFIWRALKGKLPTNELLQRFGS-AISKCYCCYSKGKDDINHILIN 963

Query: 203  SEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQR 382
               A  I       LG+   +    D    W + +  N V K+++ + P +IC  LWK R
Sbjct: 964  GNFAKHIWKIHAAILGVVPANTTLRDQLLHWRNQQVNNEVHKLLIHILPNVICWNLWKNR 1023

Query: 383  CSCKYGSQRKLIVGQMQYGPLK 448
            C+ KYG++   I  ++QYG  K
Sbjct: 1024 CAVKYGNKSSSI-HRVQYGIFK 1044



 Score = 63.9 bits (154), Expect(2) = 3e-26
 Identities = 37/96 (38%), Positives = 50/96 (52%)
 Frame = +1

Query: 442  IKAVLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENR 621
            +  V+  +FPSI     W K+ N+VE  +   K   V    P  G+ K+NTDGS +  + 
Sbjct: 1046 VMQVIKIVFPSIPWQSSWNKLINIVEHCKQQYKIVLVSWNKPGLGTYKLNTDGSALQNSG 1105

Query: 622  RAGIGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729
            + G GGILRD QG +V AFS+      NN  E   A
Sbjct: 1106 KIGGGGILRDHQGKIVYAFSLPFGFGTNNIAEIKAA 1141


>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 468

 Score = 88.2 bits (217), Expect(2) = 9e-26
 Identities = 47/128 (36%), Positives = 65/128 (50%)
 Frame = +2

Query: 23  FLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVK 202
           F ++L +K IPFK  FL WR  K K P +  +S FG        C   +  + I+H +  
Sbjct: 111 FNSALWHKFIPFKTSFLLWRTLKGKLPTNEKLSNFGIEPLPCFCCFDRAGMDTIEHIFNS 170

Query: 203 SEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQR 382
              A  + ++F    GIQ      P L K+W   K  N   K++LQ TP+ IC  LWK R
Sbjct: 171 GPFATIVWNFFAATAGIQADHSTLPALIKQWWTTKPNNAGHKLLLQATPIFICWNLWKNR 230

Query: 383 CSCKYGSQ 406
           C+CKYG +
Sbjct: 231 CACKYGGK 238



 Score = 55.8 bits (133), Expect(2) = 9e-26
 Identities = 33/89 (37%), Positives = 47/89 (52%)
 Frame = +1

Query: 451 VLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAG 630
           +L   FPSI    +W  +    EK     K ++V    PP   +K+NTDGS +    + G
Sbjct: 256 MLKNSFPSINWPANWTTLILTSEKCVHNIKVYKVTWFKPPDQWIKINTDGSALTNEGKIG 315

Query: 631 IGGILRD*QGNMVMAFSITIQCNNNNYTE 717
            GGI+RD +G M+MAFS  +   +NN  E
Sbjct: 316 AGGIIRDKEGKMIMAFSTPLGEGSNNQAE 344


>ref|XP_004228797.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 389

 Score = 75.1 bits (183), Expect(2) = 1e-24
 Identities = 40/129 (31%), Positives = 58/129 (44%)
 Frame = +2

Query: 20  PFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYV 199
           P  N + +K +PFK  F  WR  + K P +  + +FG      C CC     + ++H  +
Sbjct: 32  PIHNCVWHKNVPFKTSFFIWRALRSKLPTNENLLKFGKEELE-CYCCYRKGKDDLKHILI 90

Query: 200 KSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQ 379
               A  I       LGI  ++         W      N V K++L + P IIC  LWK 
Sbjct: 91  TGNFAKYIWKIHTKRLGIAIVNTNLRSTLLSWRRLTSYNEVHKLILHILPNIICWNLWKN 150

Query: 380 RCSCKYGSQ 406
           RCS KYG++
Sbjct: 151 RCSAKYGNK 159



 Score = 65.1 bits (157), Expect(2) = 1e-24
 Identities = 38/100 (38%), Positives = 55/100 (55%)
 Frame = +1

Query: 442 IKAVLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENR 621
           I  ++  ++P+I     W ++ NLVE+ +   K   V  E PP G  K+NTDGS      
Sbjct: 174 IMQIIKAVYPNIPWQSSWERLFNLVEQCQQHLKVTMVNWERPPEGIHKLNTDGSAKHNTG 233

Query: 622 RAGIGGILRD*QGNMVMAFSITIQCNNNNYTEALTAELEG 741
           + G GGILRD QG ++ AF+I +    NN+ E + A L G
Sbjct: 234 KIGGGGILRDHQGKLIYAFAIPLGFGTNNFAE-IQAALHG 272


>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
          Length = 2019

 Score = 83.2 bits (204), Expect(2) = 3e-24
 Identities = 43/126 (34%), Positives = 62/126 (49%)
 Frame = +2

Query: 41   YKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVKSEAAHQ 220
            + +IPFK  FL WR  + K P +  +  FG    S C CC     + I+H     + A  
Sbjct: 897  HPKIPFKCSFLLWRAIRGKLPTNEKLLSFGIEP-SDCHCCHSPGIDTIEHTLNSGDFAKN 955

Query: 221  I*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQRCSCKYG 400
            +  YF   LGI+    P  ++  RW    + N   K++L  TP+ IC  LWK RC+ KYG
Sbjct: 956  VWKYFAISLGIRTDFLPLRNMIMRWWSAPHNNEAHKLILHSTPIFICWNLWKNRCAVKYG 1015

Query: 401  SQRKLI 418
             ++  I
Sbjct: 1016 GKQSNI 1021



 Score = 55.5 bits (132), Expect(2) = 3e-24
 Identities = 29/93 (31%), Positives = 47/93 (50%)
 Frame = +1

Query: 451  VLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAG 630
            +L+ +FP I     W K CN++E      K   V    PP+  +K+NTDGS ++     G
Sbjct: 1035 LLHTVFPYISWPLRWNKFCNVIENCSQDTKVTAVQWTKPPYRWVKLNTDGSALSNPGSIG 1094

Query: 631  IGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729
             G ++R+  G +++A+S  +    NN  E   A
Sbjct: 1095 AGDVIRNHLGEIILAYSTPLGTGTNNQAEVEAA 1127



 Score = 86.7 bits (213), Expect(2) = 3e-17
 Identities = 44/132 (33%), Positives = 64/132 (48%)
 Frame = +2

Query: 23  FLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVK 202
           F   + +K IPFK  FL WR  + K P +  +  FG    +   CC  S  + I+H + K
Sbjct: 594 FNTFIWHKSIPFKTSFLLWRTLRGKLPTNEKLISFGNEPANCFCCCNRSGLDTIEHTFNK 653

Query: 203 SEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQR 382
            + A  +   F    GI       P L  +W   K+ N   +++LQ TP+ IC  LWK R
Sbjct: 654 GQFATYLWKSFAAAAGIITYHNSLPQLIMQWWSTKHNNAAYRLILQATPIFICWNLWKNR 713

Query: 383 CSCKYGSQRKLI 418
           C+ KYG ++  I
Sbjct: 714 CASKYGGKQSNI 725



 Score = 28.5 bits (62), Expect(2) = 3e-17
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +1

Query: 451 VLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAG 630
           ++   FP IK   +W ++  L E+     K   V    P    +K+NTDGS +    R G
Sbjct: 739 LMTTTFPQIKWPSNWMELLQLGERCTHDTKVTMVKWIKPKKQWVKINTDGSALCNPGRIG 798

Query: 631 IG 636
            G
Sbjct: 799 AG 800


>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 775

 Score = 84.0 bits (206), Expect(2) = 4e-24
 Identities = 48/132 (36%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
 Frame = +2

Query: 14  KYPFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCC-RVSPYEIIQH 190
           K  FL+ L +  IPFK  FL WRI K K P +  ++ FG    S C CC   +  + I H
Sbjct: 415 KNRFLSFLWHNFIPFKTSFLLWRILKGKIPTNEKLTNFGIEP-SPCYCCVDRAGMDSINH 473

Query: 191 FYVKSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*EL 370
            +     A ++   F    G+Q   Q      K+W   K  N   +++LQ TP+ IC  L
Sbjct: 474 IFNTGNFAGRVWKSFAAGAGLQQDQQTLQARLKQWWTAKSCNAGHQLLLQATPIFICWNL 533

Query: 371 WKQRCSCKYGSQ 406
           WK RC+CKYG +
Sbjct: 534 WKNRCACKYGGK 545



 Score = 54.3 bits (129), Expect(2) = 4e-24
 Identities = 31/93 (33%), Positives = 48/93 (51%)
 Frame = +1

Query: 451 VLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAG 630
           ++   FP I+    W  + +  EK +   K  QV    PP   +K+NTDGS +      G
Sbjct: 563 MMKNAFPHIQWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGNIG 622

Query: 631 IGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729
            GGI+R+ +G +VMAF+ ++   +NN  E   A
Sbjct: 623 AGGIIRNKEGKLVMAFATSLGEGSNNKAETEAA 655


>ref|XP_004253275.1| PREDICTED: uncharacterized protein LOC101268853 [Solanum
            lycopersicum]
          Length = 1333

 Score = 73.2 bits (178), Expect(2) = 3e-23
 Identities = 43/136 (31%), Positives = 64/136 (47%)
 Frame = +2

Query: 41   YKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVKSEAAHQ 220
            +K +PFKI F  WR  K K P +  + R G++      CC     + I H  +    A  
Sbjct: 983  HKHLPFKIAFFIWRALKGKLPTNEFLQRIGSDISDYS-CCYRKGKDDINHILINGNFAKY 1041

Query: 221  I*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQRCSCKYG 400
            I       LGI  ++         W + +  N V K+++ + P IIC  LWK RC+ KYG
Sbjct: 1042 IWKIHAATLGIIPVNTTLRAQLLHWRNQQVNNEVHKLLIHILPNIICWNLWKNRCAVKYG 1101

Query: 401  SQRKLIVGQMQYGPLK 448
             +R  I  +++YG  K
Sbjct: 1102 KKRSSI-HRVKYGIFK 1116



 Score = 62.4 bits (150), Expect(2) = 3e-23
 Identities = 36/96 (37%), Positives = 49/96 (51%)
 Frame = +1

Query: 442  IKAVLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENR 621
            +  V+  +FPSI    +W  + N++E      K   V    P  G+ K+NTDGS I  + 
Sbjct: 1118 VMQVIKLVFPSIPWQSNWNNLVNIIEHCSQQYKIVLVSWNKPALGTYKLNTDGSAIQNSG 1177

Query: 622  RAGIGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729
            + G GG LRD QG +V AFSI      NN+ E   A
Sbjct: 1178 KIGGGGNLRDFQGKIVYAFSIPFGVGTNNFAEIKAA 1213


>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 775

 Score = 84.0 bits (206), Expect(2) = 5e-23
 Identities = 48/132 (36%), Positives = 66/132 (50%), Gaps = 1/132 (0%)
 Frame = +2

Query: 14  KYPFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCC-RVSPYEIIQH 190
           K  FL+ L +  IPFK  FL WRI K K P +  ++ FG    S C CC   +  + I H
Sbjct: 415 KNRFLSFLWHNFIPFKTSFLLWRILKGKIPTNEKLTNFGIEP-SPCYCCVDRAGMDSINH 473

Query: 191 FYVKSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*EL 370
            +     A ++   F    G+Q   Q      K+W   K  N   +++LQ TP+ IC  L
Sbjct: 474 IFNTGNFAGRVWKSFAAGAGLQEDQQTLQARLKQWWTAKSCNAGHQLLLQATPIFICWNL 533

Query: 371 WKQRCSCKYGSQ 406
           WK RC+CKYG +
Sbjct: 534 WKNRCACKYGGK 545



 Score = 50.8 bits (120), Expect(2) = 5e-23
 Identities = 27/80 (33%), Positives = 44/80 (55%)
 Frame = +1

Query: 451 VLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAG 630
           ++   FP I+    W  + +  EK +   K  QV    PP   +K+NTDGS +    + G
Sbjct: 563 MMKNAFPHIQWPAHWTALIHTSEKCKHDTKVCQVVWNRPPEEWIKINTDGSALTNPGKIG 622

Query: 631 IGGILRD*QGNMVMAFSITI 690
            GGI+R+ +G +VMAF+ ++
Sbjct: 623 AGGIIRNKEGKLVMAFATSL 642


>ref|XP_004244918.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            lycopersicum]
          Length = 1010

 Score = 74.7 bits (182), Expect(2) = 2e-22
 Identities = 39/130 (30%), Positives = 60/130 (46%)
 Frame = +2

Query: 20   PFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYV 199
            P    + +K IPFK+ F  W+  + K P + ++  FG + +  C CC     + I H  +
Sbjct: 653  PINQFIWHKNIPFKVSFFIWKALRNKLPTNDSLMNFGMDEQE-CYCCFRKGKDDILHILI 711

Query: 200  KSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQ 379
                A  I       LG+         L   W +    N VQK++ Q+ P  IC  LWK 
Sbjct: 712  TGNFAKYIWKIHATRLGVHQDHANLRSLLLHWRNIPVHNQVQKLLYQILPNFICWNLWKN 771

Query: 380  RCSCKYGSQR 409
            RC+ K+GS++
Sbjct: 772  RCAVKHGSKQ 781



 Score = 58.2 bits (139), Expect(2) = 2e-22
 Identities = 36/97 (37%), Positives = 50/97 (51%)
 Frame = +1

Query: 439  TIKAVLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAEN 618
            T++AV+   FP+I    +   + NL E  +   K  +V  E P  G  K+NTDGS I   
Sbjct: 795  TMQAVM-VAFPNISRQNNLDMLINLAENCQQQVKVTKVMWEKPSLGIFKLNTDGSAIHNI 853

Query: 619  RRAGIGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729
             + G GGILRD  G ++ AF+I      NN+ E   A
Sbjct: 854  NKIGGGGILRDHNGKLIYAFAIPFGIGTNNFAEMKAA 890


>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 668

 Score = 75.9 bits (185), Expect(2) = 7e-21
 Identities = 40/131 (30%), Positives = 62/131 (47%)
 Frame = +2

Query: 14  KYPFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHF 193
           K+ F + L +  IPFK  FL WR+ K K P +  +S FG    S   C   +  + I+H 
Sbjct: 311 KHKFNSLLWHNFIPFKSSFLLWRVLKGKLPTNEKLSNFGIEPSSCFCCVDRTGMDSIEHT 370

Query: 194 YVKSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELW 373
           +     A ++   F    G+Q          ++W   +  N   +++LQ  P+ I   LW
Sbjct: 371 FNSGSFATRVWRAFTTTAGLQEDQSSVQARLRQWWTARLRNASHQLLLQAMPIFIVWNLW 430

Query: 374 KQRCSCKYGSQ 406
           K RC+CKYG +
Sbjct: 431 KNRCACKYGGK 441



 Score = 51.6 bits (122), Expect(2) = 7e-21
 Identities = 30/93 (32%), Positives = 44/93 (47%)
 Frame = +1

Query: 451 VLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAG 630
           +L   FP I    +W  +    E+ +   K        PP   +K+NTDGS +      G
Sbjct: 459 MLKSAFPCINWPGNWAALIQTAERCKHEIKVCMTTWNRPPEQWIKINTDGSALINTGHCG 518

Query: 631 IGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729
            GGI+RD +G +V+AF+  +    NN  EA  A
Sbjct: 519 AGGIIRDKEGKIVLAFATPLGDGTNNKAEAEAA 551


>ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum
            lycopersicum]
          Length = 1531

 Score = 79.0 bits (193), Expect(2) = 9e-21
 Identities = 45/143 (31%), Positives = 65/143 (45%)
 Frame = +2

Query: 20   PFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYV 199
            P  N + + +IPFK+ F  WR  + K P +  + RFG      C CC     + I H  +
Sbjct: 1273 PINNIIWHNQIPFKVAFFIWRALRGKLPTNEGVHRFGIAAED-CYCCYQQGKDDINHILL 1331

Query: 200  KSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQ 379
                A+ I  Y    LG+  +          W +    N V K+++Q+ P  IC  LWK 
Sbjct: 1332 TRNFANYIWKYHAAILGVTQLYTNIRSQLMHWRNQHTINEVHKLIMQILPNYICWNLWKN 1391

Query: 380  RCSCKYGSQRKLIVGQMQYGPLK 448
            RC  KYG +   I  ++QYG  K
Sbjct: 1392 RCGVKYGHKTSSI-KRVQYGIFK 1413



 Score = 48.1 bits (113), Expect(2) = 9e-21
 Identities = 24/57 (42%), Positives = 32/57 (56%)
 Frame = +1

Query: 559  EMPPFGSLKMNTDGSFIAENRRAGIGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729
            + P  G  K+NTDGS I +  + G GGILRD  G ++ AFS+ +    NN  E   A
Sbjct: 1454 QKPKEGIYKLNTDGSAIQDTGKIGGGGILRDHTGKIIYAFSVPLDFGTNNMAELKAA 1510


>ref|XP_004237273.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 601

 Score = 73.9 bits (180), Expect(2) = 1e-20
 Identities = 43/143 (30%), Positives = 65/143 (45%)
 Frame = +2

Query: 20  PFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYV 199
           P  N + +K IPFKI F  W     K P +  + R G +    C CC     + I H  +
Sbjct: 244 PINNIIWHKHIPFKISFFIWGALTGKLPTNEILQRLGRDIVD-CYCCYSKVKDDINHILL 302

Query: 200 KSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQ 379
               A+ I     + +G  H++         W   +  N V K+++   P IIC  LW+ 
Sbjct: 303 TGNFANYIWKKHASTVGALHVNTNMRSQLLYWRSLQTNNEVHKLLIHTLPNIICWNLWEN 362

Query: 380 RCSCKYGSQRKLIVGQMQYGPLK 448
           RC+ KYG ++  I  ++QYG  K
Sbjct: 363 RCAVKYGGKQSSIY-RVQYGIFK 384



 Score = 52.8 bits (125), Expect(2) = 1e-20
 Identities = 31/85 (36%), Positives = 44/85 (51%)
 Frame = +1

Query: 487 YDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAGIGGILRD*QGNM 666
           Y W  + N +++ +   K + V    P  G  K+NTDGS + EN     GGILRD QG++
Sbjct: 401 YSWGHLINFIDQCQQQYKIFMVRWIKPTIGRYKLNTDGSCLQENGNIEGGGILRDHQGSI 460

Query: 667 VMAFSITIQCNNNNYTEALTAELEG 741
           + AF+       NN  + L A L G
Sbjct: 461 IFAFASPFAFGTNNIAK-LKAALYG 484


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score =  104 bits (259), Expect = 4e-20
 Identities = 52/155 (33%), Positives = 85/155 (54%), Gaps = 3/155 (1%)
 Frame = +2

Query: 29   NSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVKSE 208
            N + + + PFK+ FL WR+ + K PF  T+ +F  N  S CVCC+    E I H ++ S+
Sbjct: 568  NKIWHGKFPFKMSFLTWRLVQNKLPFYDTVGKFVDNIDSNCVCCKNMKTETINHVFLNSD 627

Query: 209  AAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQRCS 388
             A  +   FG  LGI        +L K W + +  N++  +++   P++I  E+WK+RC+
Sbjct: 628  VASYLWKKFGGTLGIDTRASSTINLLKTWWNVQTHNSIHNVIIHTLPILIFWEIWKRRCA 687

Query: 389  CKYGSQRKLIVGQMQ---YGPLKLS*TRSFHPLKI 484
            CKYG Q+K+    M+   +  LK+S   +F   +I
Sbjct: 688  CKYGDQKKMWYRTMENHVWWNLKMSLRMTFPSFEI 722



 Score = 79.7 bits (195), Expect = 1e-12
 Identities = 44/98 (44%), Positives = 55/98 (56%)
 Frame = +1

Query: 436 WTIKAVLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAE 615
           W +K  L   FPS +    W  + N VE LRP  KW  V    P    +K+NTDGSF + 
Sbjct: 707 WNLKMSLRMTFPSFEIGNSWRDLLNKVESLRPYPKWKIVHWNTPNINCVKINTDGSFSSG 766

Query: 616 NRRAGIGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729
           N  AG+G I+RD    M+MAFSI   C++NN  EAL A
Sbjct: 767 N--AGLGWIVRDHTRRMIMAFSIPSSCSSNNLAEALAA 802


>ref|XP_006346670.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           tuberosum]
          Length = 421

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 46/132 (34%), Positives = 69/132 (52%)
 Frame = +2

Query: 11  PKYPFLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQH 190
           PK    N + ++ IPFK+ FL WR  + K P +   + FG    + C CC  S ++ I H
Sbjct: 125 PKIKLYNYIWHRHIPFKVSFLLWRALRGKFPTNDKTTTFGV-APAKCSCCIKSGWDTIDH 183

Query: 191 FYVKSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*EL 370
            +V    A+ I  +    LG++    P  +L KRW   +Y N +Q+++    P+II   L
Sbjct: 184 IFVTGHFANHIWQFHSAMLGVRQDKIPLKNLIKRWWTMEYKNEIQELLYHSMPIIISCNL 243

Query: 371 WKQRCSCKYGSQ 406
           WK RCS KYG +
Sbjct: 244 WKNRCSAKYGGK 255


>ref|XP_004253436.1| PREDICTED: uncharacterized protein LOC101262707 [Solanum
            lycopersicum]
          Length = 764

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
 Frame = +2

Query: 23   FLNSLLY-KRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYV 199
            ++N++++ K IPFKI F  WR  K K P +  +  FG      C CC     + I H   
Sbjct: 585  YINTIIWHKYIPFKISFFIWRAIKGKLPTNDNLQIFGKPAEE-CYCCYKQGKDDINHILS 643

Query: 200  KSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQ 379
                A+ I  Y+   LG+ H+      L   W +   TN V K + Q+ P IIC  LWK 
Sbjct: 644  TGHFANYIWKYYARKLGVIHLQTNIRSLFILWRNQHATNQVLKTLFQILPNIICWNLWKN 703

Query: 380  RCSCKYGSQRKLIVGQMQYGPLK 448
            RC+ KYG++R  I  ++QYG  K
Sbjct: 704  RCAVKYGNKRSSI-NRVQYGIYK 725


>ref|XP_004248946.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 622

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 47/128 (36%), Positives = 64/128 (50%)
 Frame = +2

Query: 23  FLNSLLYKRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYVK 202
           F ++L +K IPFK  FL WR  K K P +  +S FG        C      + I+H +  
Sbjct: 359 FNSALWHKFIPFKTSFLLWRTLKGKLPTNEKLSNFGIEPLPCFCCFDRGGMDTIEHIFNS 418

Query: 203 SEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQR 382
              A  + ++F    GIQ      P L K+W   K  N   K++LQ TP+ IC  LWK R
Sbjct: 419 GPFATIVWNFFAATAGIQADHSTLPALIKQWWTAKPNNAGHKLLLQATPIFICWNLWKNR 478

Query: 383 CSCKYGSQ 406
           C+CKYG +
Sbjct: 479 CACKYGGK 486


>ref|XP_004253277.1| PREDICTED: uncharacterized protein LOC101244169 [Solanum
            lycopersicum]
          Length = 764

 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 50/143 (34%), Positives = 73/143 (51%), Gaps = 1/143 (0%)
 Frame = +2

Query: 23   FLNSLLY-KRIPFKIFFLNWRIFKRKAPFDVTISRFGTNRRSMCVCCRVSPYEIIQHFYV 199
            ++N++++ K IPFKI F  WR  + K P + ++  FG      C CC     + I H   
Sbjct: 585  YINTIIWHKYIPFKISFFIWRAIRGKLPTNDSLQIFGKPAEE-CYCCYKQGKDDINHILS 643

Query: 200  KSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC*ELWKQ 379
                A+ I  Y+   LG+ H+      L  +W +   TN V K + Q+ P IIC  LWK 
Sbjct: 644  TGHFANYIWKYYARKLGVIHLQTNIRSLFIQWRNQHATNQVLKTLFQILPNIICWNLWKN 703

Query: 380  RCSCKYGSQRKLIVGQMQYGPLK 448
            RC+ KYG++R  I  + QYG  K
Sbjct: 704  RCAVKYGNKRSSI-NRAQYGIYK 725


>ref|XP_004253498.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
           lycopersicum]
          Length = 308

 Score = 50.1 bits (118), Expect(2) = 1e-12
 Identities = 28/93 (30%), Positives = 46/93 (49%)
 Frame = +1

Query: 451 VLNKIFPSIKNIYDWPKICNLVEKLRPIRKWWQVF*EMPPFGSLKMNTDGSFIAENRRAG 630
           ++   FP I     W  +    E+ +   K  +V    PP   +K+NTDGS +    + G
Sbjct: 96  MMKNAFPHINWPAHWTALITTSERCKHEIKVCKVTWNRPPEEWIKINTDGSALTNPGKIG 155

Query: 631 IGGILRD*QGNMVMAFSITIQCNNNNYTEALTA 729
            GGI+RD  G +++AF+ ++   +NN  E   A
Sbjct: 156 AGGIIRDKDGKLILAFATSLGEGSNNKAETEAA 188



 Score = 49.7 bits (117), Expect(2) = 1e-12
 Identities = 24/79 (30%), Positives = 36/79 (45%)
 Frame = +2

Query: 182 IQHFYVKSEAAHQI*SYFGNPLGIQHIDQPAPDLSKRW*DCKYTNNVQKMVLQVTPLIIC 361
           I H +   + A  +   F    G+QH         ++W      N   +++LQ TP+ IC
Sbjct: 4   IDHIFSTGKFAGTVWKSFAASAGLQHDQTTLQARLEKWWTANPRNEGHQLLLQATPIFIC 63

Query: 362 *ELWKQRCSCKYGSQRKLI 418
             LWK RC+ KYG +   I
Sbjct: 64  WNLWKNRCASKYGGKATYI 82