BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00027606
         (545 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal doma...   218   6e-55
ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal doma...   209   4e-52
gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly...   209   4e-52
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma...    74   2e-11
emb|CBI35661.3| unnamed protein product [Vitis vinifera]               71   2e-10
ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal doma...    63   5e-08
gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-l...    61   2e-07
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr...    59   1e-06
ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citr...    59   1e-06
ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citr...    59   1e-06

>ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            3-like [Solanum tuberosum]
          Length = 1218

 Score =  218 bits (556), Expect = 6e-55
 Identities = 126/187 (67%), Positives = 136/187 (72%), Gaps = 6/187 (3%)
 Frame = +1

Query: 1    EVSSSNVVHNASLLNASITGQPIVSSVPQTNILAGQGLGTA---DRLSFLPNPSLRSSTA 171
            EV+S +VVHNAS LN S  GQPI+SSVPQTNIL GQGLGTA   D LSFLPNPSLRSSTA
Sbjct: 443  EVTSLDVVHNASHLNESSMGQPILSSVPQTNILDGQGLGTARTADPLSFLPNPSLRSSTA 502

Query: 172  KSRDPRLRLATSDAAVQSTXXXXXXXXXXXXXXXASLEMLGSRKQKTVELPAFDAPLSKR 351
            KSRDPRLRLATSDA  Q+T               ASLEM+GS+KQKTV+LP F APL KR
Sbjct: 503  KSRDPRLRLATSDAVAQNTNKNILPIPDIDLKLEASLEMIGSKKQKTVDLPVFGAPLPKR 562

Query: 352  QRSEQTDSIIVSDVRPXXXXXXXXXXXXXXXXPITSS---TDNSDNDIRKLEQVPTSVAT 522
            QRSEQTDSIIVSDVRP                PITSS   TD+SDNDIRKLEQV  ++AT
Sbjct: 563  QRSEQTDSIIVSDVRPSTGNGGWLEDRGTAGLPITSSNCATDSSDNDIRKLEQVTATIAT 622

Query: 523  IPSVIVN 543
            IPSVIVN
Sbjct: 623  IPSVIVN 629


>ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Solanum lycopersicum]
          Length = 1211

 Score =  209 bits (531), Expect = 4e-52
 Identities = 125/187 (66%), Positives = 134/187 (71%), Gaps = 6/187 (3%)
 Frame = +1

Query: 1   EVSSSNVVHNASLLNASITGQPIVSSVPQTNILAGQGLGT---ADRLSFLPNPSLRSSTA 171
           EV+S +VVHNAS LN S  GQPI+SSVPQTNIL GQGLGT   AD LSFLPNPSLRSSTA
Sbjct: 439 EVTSFDVVHNASHLNESSMGQPILSSVPQTNILDGQGLGTTRTADPLSFLPNPSLRSSTA 498

Query: 172 KSRDPRLRLATSDAAVQSTXXXXXXXXXXXXXXXASLEMLGSRKQKTVELPAFDAPLSKR 351
           KSRDPRLRLATSD   Q+T               ASLEM+ S+KQKTV+L AFDAPL KR
Sbjct: 499 KSRDPRLRLATSDTVAQNTILPIPDIDLKLE---ASLEMIVSKKQKTVDLSAFDAPLPKR 555

Query: 352 QRSEQTDSIIVSDVRPXXXXXXXXXXXXXXXXPITSS---TDNSDNDIRKLEQVPTSVAT 522
           QRSEQTDSIIVSDVRP                PITSS   T NSDNDIRKLEQV  ++AT
Sbjct: 556 QRSEQTDSIIVSDVRPSIGNGGWLEDRGTAELPITSSNCATYNSDNDIRKLEQVTATIAT 615

Query: 523 IPSVIVN 543
           IPSVIVN
Sbjct: 616 IPSVIVN 622


>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
          Length = 1227

 Score =  209 bits (531), Expect = 4e-52
 Identities = 125/187 (66%), Positives = 134/187 (71%), Gaps = 6/187 (3%)
 Frame = +1

Query: 1   EVSSSNVVHNASLLNASITGQPIVSSVPQTNILAGQGLGT---ADRLSFLPNPSLRSSTA 171
           EV+S +VVHNAS LN S  GQPI+SSVPQTNIL GQGLGT   AD LSFLPNPSLRSSTA
Sbjct: 439 EVTSFDVVHNASHLNESSMGQPILSSVPQTNILDGQGLGTTRTADPLSFLPNPSLRSSTA 498

Query: 172 KSRDPRLRLATSDAAVQSTXXXXXXXXXXXXXXXASLEMLGSRKQKTVELPAFDAPLSKR 351
           KSRDPRLRLATSD   Q+T               ASLEM+ S+KQKTV+L AFDAPL KR
Sbjct: 499 KSRDPRLRLATSDTVAQNTILPIPDIDLKLE---ASLEMIVSKKQKTVDLSAFDAPLPKR 555

Query: 352 QRSEQTDSIIVSDVRPXXXXXXXXXXXXXXXXPITSS---TDNSDNDIRKLEQVPTSVAT 522
           QRSEQTDSIIVSDVRP                PITSS   T NSDNDIRKLEQV  ++AT
Sbjct: 556 QRSEQTDSIIVSDVRPSIGNGGWLEDRGTAELPITSSNCATYNSDNDIRKLEQVTATIAT 615

Query: 523 IPSVIVN 543
           IPSVIVN
Sbjct: 616 IPSVIVN 622


>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Vitis vinifera]
          Length = 1238

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 53/136 (38%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
 Frame = +1

Query: 1   EVSSSNVVHNASLLNASITGQPIVSSVPQTNILAGQGLGTADRLSFLPN-PSLRSS---T 168
           EVSSS+ +      NA   G PIVSS PQ +    QG       S + + P L SS   +
Sbjct: 471 EVSSSSTISAPITANAPALGHPIVSSAPQMDSSIVQGPTVGRNTSLVSSGPHLDSSVVAS 530

Query: 169 AKSRDPRLRLATSDAAVQSTXXXXXXXXXXXXXXXASLEMLGSRKQKTVELPAFDAPLSK 348
           AKSRDPRLRLA+SDA                       E++ SRKQK+ E P  D P++K
Sbjct: 531 AKSRDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTK 590

Query: 349 RQRSEQTDSIIVSDVR 396
           RQR+  T    V D +
Sbjct: 591 RQRNGLTSPATVRDAQ 606


>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
          Length = 1184

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 50/124 (40%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
 Frame = +1

Query: 1   EVSSSNVVHNASLLNASITGQPIVSSVPQTNILAGQGLG-TADRLSFLPNPSLRSSTAKS 177
           EVSSS+ +      NA   G PIVSS PQ +I+ G  +      ++   N  LR+S AKS
Sbjct: 457 EVSSSSTISAPITANAPALGHPIVSSAPQMDIVQGLVVPRNTGAVNSRFNSILRAS-AKS 515

Query: 178 RDPRLRLATSDAAVQSTXXXXXXXXXXXXXXXASLEMLGSRKQKTVELPAFDAPLSKRQR 357
           RDPRLRLA+SDA                       E++ SRKQK+ E P  D P++KRQR
Sbjct: 516 RDPRLRLASSDAGSLDLNERPLPAVSNSPKVDPLGEIVSSRKQKSAEEPLLDGPVTKRQR 575

Query: 358 SEQT 369
           +  T
Sbjct: 576 NGLT 579


>ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           3-like [Fragaria vesca subsp. vesca]
          Length = 1230

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 49/125 (39%), Positives = 61/125 (48%), Gaps = 6/125 (4%)
 Frame = +1

Query: 1   EVSSSNVVHNASLLNASITGQPIVSSVPQTNILAGQGLG------TADRLSFLPNPSLRS 162
           EVSSS+  +N       ++G+ +VSSVP T +    G+       TA  +S   N   +S
Sbjct: 454 EVSSSSASNNVRTPQPPVSGRQVVSSVPATTLPGSSGMHGLITAKTASPVSLGSNMPNKS 513

Query: 163 STAKSRDPRLRLATSDAAVQSTXXXXXXXXXXXXXXXASLEMLGSRKQKTVELPAFDAPL 342
           S AKSRDPRLR A SDA    T                S+  L SRK K+ E   FD P 
Sbjct: 514 S-AKSRDPRLRFANSDAGA-LTLNQQSSIQVHNAPKVDSVITLSSRKHKSPEDSNFDGPE 571

Query: 343 SKRQR 357
           SKRQR
Sbjct: 572 SKRQR 576


>gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
            [Theobroma cacao]
          Length = 1290

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 54/182 (29%), Positives = 82/182 (45%), Gaps = 7/182 (3%)
 Frame = +1

Query: 1    EVSSSNVVHNASLLNASITGQPIVSSVPQTNILAGQGLGTADRLSFLPNPSLRS----ST 168
            EVSSS+ + N    N  I G PIVSS P  +  +    G     +  P  S+ +    S 
Sbjct: 500  EVSSSSSIGNFKP-NLPILGHPIVSSAPLVDSASSSLQGQITTRNATPMSSVSNIVSKSL 558

Query: 169  AKSRDPRLRLATSDAAVQSTXXXXXXXXXXXXXXXASLEMLGSRKQKTVELPAFDAPLSK 348
            AKSRDPRL  A S+A+                     ++   SRK+K+VE P  D+P  K
Sbjct: 559  AKSRDPRLWFANSNASALDLNERLLHNASKVAPVGGIMD---SRKKKSVEEPILDSPALK 615

Query: 349  RQRSEQTDSIIVSDVRPXXXXXXXXXXXXXXXXPITS---STDNSDNDIRKLEQVPTSVA 519
            RQR+E  +  +  DV+                  IT+   + +N +++ RK++   TS +
Sbjct: 616  RQRNELENLGVARDVQTVSGIGGWLEDTDAIGSQITNRNQTAENLESNSRKMDNGVTSSS 675

Query: 520  TI 525
            T+
Sbjct: 676  TL 677


>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
            gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
            polymerase II C-terminal domain phosphatase-like 3-like
            [Citrus sinensis] gi|557541056|gb|ESR52100.1|
            hypothetical protein CICLE_v10030535mg [Citrus
            clementina]
          Length = 1234

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 59/200 (29%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
 Frame = +1

Query: 1    EVSSSNVVHNASLLNASITGQPIVSSVPQT-----NILAGQGLGTADRLS---------F 138
            E+SS+  V     +N    GQ  VSS P       +I + Q L TA+  +          
Sbjct: 455  EISSATAVDQPKPVNMPTLGQQPVSSQPMDISQPMDISSVQALTTANNSAPASSGYNPVV 514

Query: 139  LPNPSLRSSTAKSRDPRLRLATSDAAVQSTXXXXXXXXXXXXXXXASLEMLGSRKQKTVE 318
             PNP +++   KSRDPRLR A+S+A   +                    ++ SRKQKTVE
Sbjct: 515  KPNPVVKAPI-KSRDPRLRFASSNALNLNHQPAPILHNAPKVEPVG--RVMSSRKQKTVE 571

Query: 319  LPAFDAPLSKRQRSEQTDSIIVSDVRPXXXXXXXXXXXXXXXXPITSS---TDNSDNDIR 489
             P  D P  KRQR+   +S +V D +                  I +     D+++++ R
Sbjct: 572  EPVLDGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTDMFEPQIMNRNLLVDSAESNSR 631

Query: 490  KLEQVPTSVAT--IPSVIVN 543
            KL+   TS  T   P+V+V+
Sbjct: 632  KLDNGATSPITSGTPNVVVS 651


>ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
            gi|557541054|gb|ESR52098.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
          Length = 1208

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 59/200 (29%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
 Frame = +1

Query: 1    EVSSSNVVHNASLLNASITGQPIVSSVPQT-----NILAGQGLGTADRLS---------F 138
            E+SS+  V     +N    GQ  VSS P       +I + Q L TA+  +          
Sbjct: 455  EISSATAVDQPKPVNMPTLGQQPVSSQPMDISQPMDISSVQALTTANNSAPASSGYNPVV 514

Query: 139  LPNPSLRSSTAKSRDPRLRLATSDAAVQSTXXXXXXXXXXXXXXXASLEMLGSRKQKTVE 318
             PNP +++   KSRDPRLR A+S+A   +                    ++ SRKQKTVE
Sbjct: 515  KPNPVVKAPI-KSRDPRLRFASSNALNLNHQPAPILHNAPKVEPVG--RVMSSRKQKTVE 571

Query: 319  LPAFDAPLSKRQRSEQTDSIIVSDVRPXXXXXXXXXXXXXXXXPITSS---TDNSDNDIR 489
             P  D P  KRQR+   +S +V D +                  I +     D+++++ R
Sbjct: 572  EPVLDGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTDMFEPQIMNRNLLVDSAESNSR 631

Query: 490  KLEQVPTSVAT--IPSVIVN 543
            KL+   TS  T   P+V+V+
Sbjct: 632  KLDNGATSPITSGTPNVVVS 651


>ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
            gi|567892677|ref|XP_006438859.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
            gi|557541053|gb|ESR52097.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
            gi|557541055|gb|ESR52099.1| hypothetical protein
            CICLE_v10030535mg [Citrus clementina]
          Length = 1118

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 59/200 (29%), Positives = 88/200 (44%), Gaps = 19/200 (9%)
 Frame = +1

Query: 1    EVSSSNVVHNASLLNASITGQPIVSSVPQT-----NILAGQGLGTADRLS---------F 138
            E+SS+  V     +N    GQ  VSS P       +I + Q L TA+  +          
Sbjct: 455  EISSATAVDQPKPVNMPTLGQQPVSSQPMDISQPMDISSVQALTTANNSAPASSGYNPVV 514

Query: 139  LPNPSLRSSTAKSRDPRLRLATSDAAVQSTXXXXXXXXXXXXXXXASLEMLGSRKQKTVE 318
             PNP +++   KSRDPRLR A+S+A   +                    ++ SRKQKTVE
Sbjct: 515  KPNPVVKAPI-KSRDPRLRFASSNALNLNHQPAPILHNAPKVEPVG--RVMSSRKQKTVE 571

Query: 319  LPAFDAPLSKRQRSEQTDSIIVSDVRPXXXXXXXXXXXXXXXXPITSS---TDNSDNDIR 489
             P  D P  KRQR+   +S +V D +                  I +     D+++++ R
Sbjct: 572  EPVLDGPALKRQRNGFENSGVVRDEKNIYGSGGWLEDTDMFEPQIMNRNLLVDSAESNSR 631

Query: 490  KLEQVPTSVAT--IPSVIVN 543
            KL+   TS  T   P+V+V+
Sbjct: 632  KLDNGATSPITSGTPNVVVS 651