BLASTX nr result
ID: Atropa21_contig00027605
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00027605
(787 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal doma... 298 1e-78
ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal doma... 278 2e-72
gb|AAV92930.1| putative transcription regulator CPL1 [Solanum ly... 260 4e-67
ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal doma... 134 4e-29
emb|CBI35661.3| unnamed protein product [Vitis vinifera] 121 2e-25
gb|EMJ26611.1| hypothetical protein PRUPE_ppa000589mg [Prunus pe... 114 5e-23
ref|XP_004492029.1| PREDICTED: RNA polymerase II C-terminal doma... 112 2e-22
ref|XP_004492028.1| PREDICTED: RNA polymerase II C-terminal doma... 112 2e-22
ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative ... 111 3e-22
gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-l... 105 2e-20
ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Popu... 104 3e-20
ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Popu... 104 3e-20
gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-l... 104 3e-20
ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citr... 102 1e-19
ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citr... 102 1e-19
ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citr... 102 1e-19
ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus tric... 97 5e-18
ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera... 96 1e-17
ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal doma... 96 1e-17
ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal doma... 94 7e-17
>ref|XP_006341905.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Solanum tuberosum]
Length = 1218
Score = 298 bits (764), Expect = 1e-78
Identities = 171/265 (64%), Positives = 179/265 (67%), Gaps = 4/265 (1%)
Frame = -3
Query: 785 TDSIIVSDVRPSTGNGGWLEDRGTAGLPXXXXXXXXXXXXR---KLEQVTTSVAAIPSVI 615
TDSIIVSDVRPSTGNGGWLEDRGTAGLP KLEQVT ++A IPSVI
Sbjct: 568 TDSIIVSDVRPSTGNGGWLEDRGTAGLPITSSNCATDSSDNDIRKLEQVTATIATIPSVI 627
Query: 614 VNADENLPXXXXXXXXXXXXXLKDIAINPSIWMNIIKMEQQKXXXXXXXXXXXXXXXXXX 435
VNA EN P LKDIAINPSIWMNIIKMEQQK
Sbjct: 628 VNAAENFPVTGISTSTTLHSLLKDIAINPSIWMNIIKMEQQKSADASRTTTAQASSSKSI 687
Query: 434 XXXXS-TDVVAPRTSVIGQKSVGILQTPTQTAVADEGAIVRMKPRDPRRALHNTAVLKGG 258
TD +APR+S IGQ+SVGILQTPT TA ADE AIVRMKPRDPRR LHNTAVLKGG
Sbjct: 688 LGAVPSTDAIAPRSSAIGQRSVGILQTPTHTASADEVAIVRMKPRDPRRVLHNTAVLKGG 747
Query: 257 NVGSDQCKTGIAGTQAMTSNLCVQRQEDQLDRKSAVTLSTAPPDIDRQFTKNLKNIADMI 78
NVGSDQCKTG+AGT A SNL Q QEDQLDRKSAVTLST PPDI RQFTKNLKNIADMI
Sbjct: 748 NVGSDQCKTGVAGTHATISNLGFQSQEDQLDRKSAVTLSTTPPDIARQFTKNLKNIADMI 807
Query: 77 SVXXXXXXXXXXXXXTQHIQVNQSR 3
SV TQ +Q +QSR
Sbjct: 808 SVSPSTSLSAASQTQTQCLQSHQSR 832
>ref|XP_004252660.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Solanum lycopersicum]
Length = 1211
Score = 278 bits (710), Expect = 2e-72
Identities = 164/265 (61%), Positives = 172/265 (64%), Gaps = 4/265 (1%)
Frame = -3
Query: 785 TDSIIVSDVRPSTGNGGWLEDRGTAGLPXXXXXXXXXXXXR---KLEQVTTSVAAIPSVI 615
TDSIIVSDVRPS GNGGWLEDRGTA LP KLEQVT ++A IPSVI
Sbjct: 561 TDSIIVSDVRPSIGNGGWLEDRGTAELPITSSNCATYNSDNDIRKLEQVTATIATIPSVI 620
Query: 614 VNADENLPXXXXXXXXXXXXXLKDIAINPSIWMNIIKMEQQKXXXXXXXXXXXXXXXXXX 435
VNA EN P LKDIAINPSIWMNIIK EQQK
Sbjct: 621 VNAAENFPVTGISTSTTLHSLLKDIAINPSIWMNIIKTEQQKSADASRTNTAQASSSKSI 680
Query: 434 XXXXSTDV-VAPRTSVIGQKSVGILQTPTQTAVADEGAIVRMKPRDPRRALHNTAVLKGG 258
+ V VAPR+S IGQ+SVGILQTPT TA ADE AIVRMKPRDPRR LH+TAVLKGG
Sbjct: 681 LGAVPSTVAVAPRSSAIGQRSVGILQTPTHTASADEVAIVRMKPRDPRRVLHSTAVLKGG 740
Query: 257 NVGSDQCKTGIAGTQAMTSNLCVQRQEDQLDRKSAVTLSTAPPDIDRQFTKNLKNIADMI 78
+VG DQCKTG+AGT A SNL Q QEDQLDRKSAVTLST PPDI QFTKNLKNIADMI
Sbjct: 741 SVGLDQCKTGVAGTHATISNLSFQSQEDQLDRKSAVTLSTTPPDIACQFTKNLKNIADMI 800
Query: 77 SVXXXXXXXXXXXXXTQHIQVNQSR 3
SV T IQ QSR
Sbjct: 801 SVSPSTSPSVASQTQTLCIQAYQSR 825
>gb|AAV92930.1| putative transcription regulator CPL1 [Solanum lycopersicum]
Length = 1227
Score = 260 bits (664), Expect = 4e-67
Identities = 164/300 (54%), Positives = 172/300 (57%), Gaps = 39/300 (13%)
Frame = -3
Query: 785 TDSIIVSDVRPSTGNGGWLEDRGTAGLPXXXXXXXXXXXXR---KLEQVTTSVAAIPSVI 615
TDSIIVSDVRPS GNGGWLEDRGTA LP KLEQVT ++A IPSVI
Sbjct: 561 TDSIIVSDVRPSIGNGGWLEDRGTAELPITSSNCATYNSDNDIRKLEQVTATIATIPSVI 620
Query: 614 VNADENLPXXXXXXXXXXXXXLKDIAINPSIWMNIIKMEQQKXXXXXXXXXXXXXXXXXX 435
VNA EN P LKDIAINPSIWMNIIK EQQK
Sbjct: 621 VNAAENFPVTGISTSTTLHSLLKDIAINPSIWMNIIKTEQQKSADASRTNTAQASSSKSI 680
Query: 434 XXXXSTDV-VAPRTSVIGQKSVGILQTPTQTAVA-------------------------- 336
+ V VAPR+S IGQ+SVGILQTPT TA A
Sbjct: 681 LGAVPSTVAVAPRSSAIGQRSVGILQTPTHTASAASSIYNLLMNDFIYSVIFTASIAQFP 740
Query: 335 ---------DEGAIVRMKPRDPRRALHNTAVLKGGNVGSDQCKTGIAGTQAMTSNLCVQR 183
DE AIVRMKPRDPRR LH+TAVLKGG+VG DQCKTG+AGT A SNL Q
Sbjct: 741 FYFFLTFSRDEVAIVRMKPRDPRRVLHSTAVLKGGSVGLDQCKTGVAGTHATISNLSFQS 800
Query: 182 QEDQLDRKSAVTLSTAPPDIDRQFTKNLKNIADMISVXXXXXXXXXXXXXTQHIQVNQSR 3
QEDQLDRKSAVTLST PPDI QFTKNLKNIADMISV T IQ QSR
Sbjct: 801 QEDQLDRKSAVTLSTTPPDIACQFTKNLKNIADMISVSPSTSPSVASQTQTLCIQAYQSR 860
>ref|XP_002266931.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Vitis vinifera]
Length = 1238
Score = 134 bits (337), Expect = 4e-29
Identities = 94/245 (38%), Positives = 116/245 (47%), Gaps = 8/245 (3%)
Frame = -3
Query: 785 TDSIIVSDVRPSTGNGGWLEDRGTA---GLPXXXXXXXXXXXXRKLEQVTTSVAAI---- 627
T V D + +GGWLED T + +KLE T V I
Sbjct: 597 TSPATVRDAQTVVASGGWLEDSNTVIPQMMNRNQLIENTGTDPKKLESKVT-VTGIGCDK 655
Query: 626 PSVIVNADENLPXXXXXXXXXXXXXLKDIAINPSIWMNII-KMEQQKXXXXXXXXXXXXX 450
P V VN +E+LP LKDIA+NP++WMNI K+EQQK
Sbjct: 656 PYVTVNGNEHLPVVATSTTASLQSLLKDIAVNPAVWMNIFNKVEQQKSGDPAKNTVLPPT 715
Query: 449 XXXXXXXXXSTDVVAPRTSVIGQKSVGILQTPTQTAVADEGAIVRMKPRDPRRALHNTAV 270
V + S +GQK G LQ P QT DE VRMKPRDPRR LH +
Sbjct: 716 SNSILGVVPPASVAPLKPSALGQKPAGALQVP-QTGPMDESGKVRMKPRDPRRILHANSF 774
Query: 269 LKGGNVGSDQCKTGIAGTQAMTSNLCVQRQEDQLDRKSAVTLSTAPPDIDRQFTKNLKNI 90
+ G+ GS+Q KT Q+QEDQ + KS + S PPDI +QFTKNLKNI
Sbjct: 775 QRSGSSGSEQFKTN------------AQKQEDQTETKSVPSHSVNPPDISQQFTKNLKNI 822
Query: 89 ADMIS 75
AD++S
Sbjct: 823 ADLMS 827
>emb|CBI35661.3| unnamed protein product [Vitis vinifera]
Length = 1184
Score = 121 bits (304), Expect = 2e-25
Identities = 76/187 (40%), Positives = 95/187 (50%), Gaps = 3/187 (1%)
Frame = -3
Query: 626 PSVIVNADENLPXXXXXXXXXXXXXLKDIAINPSIWMNII-KMEQQKXXXXXXXXXXXXX 450
P V VN +E+LP LKDIA+NP++WMNI K+EQQK
Sbjct: 599 PYVTVNGNEHLPVVATSTTASLQSLLKDIAVNPAVWMNIFNKVEQQKSGDPAKNTVLPPT 658
Query: 449 XXXXXXXXXSTDVVAPRTSVIGQKSVGILQTPTQTAV--ADEGAIVRMKPRDPRRALHNT 276
V + S +GQK G LQ P + DE VRMKPRDPRR LH
Sbjct: 659 SNSILGVVPPASVAPLKPSALGQKPAGALQVPQTGPMNPQDESGKVRMKPRDPRRILHAN 718
Query: 275 AVLKGGNVGSDQCKTGIAGTQAMTSNLCVQRQEDQLDRKSAVTLSTAPPDIDRQFTKNLK 96
+ + G+ GS+Q KT Q+QEDQ + KS + S PPDI +QFTKNLK
Sbjct: 719 SFQRSGSSGSEQFKTN------------AQKQEDQTETKSVPSHSVNPPDISQQFTKNLK 766
Query: 95 NIADMIS 75
NIAD++S
Sbjct: 767 NIADLMS 773
>gb|EMJ26611.1| hypothetical protein PRUPE_ppa000589mg [Prunus persica]
Length = 1085
Score = 114 bits (284), Expect = 5e-23
Identities = 85/251 (33%), Positives = 118/251 (47%), Gaps = 14/251 (5%)
Frame = -3
Query: 782 DSIIVSDVRPSTGNGGWLEDRGTAGLPXXXXXXXXXXXXRKLEQVTTSVAAIPSVI---- 615
+S IV D + ++G+GGWLED G G P + V + PS +
Sbjct: 432 NSGIVGDAKTASGSGGWLEDIGGVG-PHLNSKNQTVENAETDPRNVVKVLSSPSTVDCNT 490
Query: 614 --VNADENLPXXXXXXXXXXXXXLKDIAINPSIWMNIIKMEQQKXXXXXXXXXXXXXXXX 441
N+ LKDIA+NP++ +N++KM QQ+
Sbjct: 491 NGPNSANEHVSLMGASMASLPELLKDIAVNPTMLLNLLKMGQQQRVASEAHQKSADPPKT 550
Query: 440 XXXXXXSTDV-VAPRTSVIGQKSVGILQTP-------TQTAVADEGAIVRMKPRDPRRAL 285
S+ + V+ + K+ GILQTP +Q A+ DE VRMKPRDPRRAL
Sbjct: 551 MTHPTSSSSILVSAALGNVPSKTSGILQTPAGTLPVSSQKALMDESGKVRMKPRDPRRAL 610
Query: 284 HNTAVLKGGNVGSDQCKTGIAGTQAMTSNLCVQRQEDQLDRKSAVTLSTAPPDIDRQFTK 105
H A+ K G++G +Q + I A+ N Q D+K + S PDI RQFTK
Sbjct: 611 HGNALQKSGSLGQEQFRNIIPPLSAIQGN--KDNLNGQADKKLVTSQSLDAPDITRQFTK 668
Query: 104 NLKNIADMISV 72
NLKNIAD++SV
Sbjct: 669 NLKNIADIMSV 679
>ref|XP_004492029.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like isoform X2 [Cicer arietinum]
Length = 1227
Score = 112 bits (279), Expect = 2e-22
Identities = 79/244 (32%), Positives = 120/244 (49%), Gaps = 15/244 (6%)
Frame = -3
Query: 758 RPSTGNGGWLEDRGTAGLPXXXXXXXXXXXXRKLEQVTTSVAAIPSVIVNADENLPXXXX 579
R GNGGWLE+ AG +L++ ++ + +V N +E P
Sbjct: 570 RTMAGNGGWLEENRVAGSHLIERNHLMQKGETELKKTMSTSSGYSTVTSNGNEQAPVTVS 629
Query: 578 XXXXXXXXXLKDIAINPSIWMNIIKMEQQKXXXXXXXXXXXXXXXXXXXXXXSTDVVAP- 402
LK+IA+NP++ +NI+ +QQ+ + A
Sbjct: 630 NTAAALPGLLKNIAVNPTMLLNILLEQQQRLAAEANKKPVDSATSTMHLTNSARGPDATV 689
Query: 401 -----RTSVIGQKSVGILQTPTQTA-----VADEGAIVRMKPRDPRRALHNTAVL-KGGN 255
T+ + Q SVG+L TQ A + ++ +RMKPRDPRR LH ++ L K G+
Sbjct: 690 NTGPAMTAGLPQSSVGMLPASTQAASMAHTLLEDSGKIRMKPRDPRRILHGSSSLQKSGS 749
Query: 254 VGSDQCKTGIAGT---QAMTSNLCVQRQEDQLDRKSAVTLSTAPPDIDRQFTKNLKNIAD 84
GS+Q K+ ++ T Q N+ Q+ + +++ K A T S+A PDI RQFTKNLKNIAD
Sbjct: 750 TGSEQSKSVVSPTSNNQGNGGNVNAQKLDVRVETKLAPTQSSAQPDITRQFTKNLKNIAD 809
Query: 83 MISV 72
++SV
Sbjct: 810 IMSV 813
>ref|XP_004492028.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like isoform X1 [Cicer arietinum]
Length = 1247
Score = 112 bits (279), Expect = 2e-22
Identities = 79/244 (32%), Positives = 120/244 (49%), Gaps = 15/244 (6%)
Frame = -3
Query: 758 RPSTGNGGWLEDRGTAGLPXXXXXXXXXXXXRKLEQVTTSVAAIPSVIVNADENLPXXXX 579
R GNGGWLE+ AG +L++ ++ + +V N +E P
Sbjct: 590 RTMAGNGGWLEENRVAGSHLIERNHLMQKGETELKKTMSTSSGYSTVTSNGNEQAPVTVS 649
Query: 578 XXXXXXXXXLKDIAINPSIWMNIIKMEQQKXXXXXXXXXXXXXXXXXXXXXXSTDVVAP- 402
LK+IA+NP++ +NI+ +QQ+ + A
Sbjct: 650 NTAAALPGLLKNIAVNPTMLLNILLEQQQRLAAEANKKPVDSATSTMHLTNSARGPDATV 709
Query: 401 -----RTSVIGQKSVGILQTPTQTA-----VADEGAIVRMKPRDPRRALHNTAVL-KGGN 255
T+ + Q SVG+L TQ A + ++ +RMKPRDPRR LH ++ L K G+
Sbjct: 710 NTGPAMTAGLPQSSVGMLPASTQAASMAHTLLEDSGKIRMKPRDPRRILHGSSSLQKSGS 769
Query: 254 VGSDQCKTGIAGT---QAMTSNLCVQRQEDQLDRKSAVTLSTAPPDIDRQFTKNLKNIAD 84
GS+Q K+ ++ T Q N+ Q+ + +++ K A T S+A PDI RQFTKNLKNIAD
Sbjct: 770 TGSEQSKSVVSPTSNNQGNGGNVNAQKLDVRVETKLAPTQSSAQPDITRQFTKNLKNIAD 829
Query: 83 MISV 72
++SV
Sbjct: 830 IMSV 833
>ref|XP_002512650.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
gi|223548611|gb|EEF50102.1| RNA polymerase II ctd
phosphatase, putative [Ricinus communis]
Length = 1195
Score = 111 bits (277), Expect = 3e-22
Identities = 84/263 (31%), Positives = 117/263 (44%), Gaps = 26/263 (9%)
Frame = -3
Query: 782 DSIIVSDVRPSTGNGGWLEDRGTAGLPXXXXXXXXXXXXRKLEQ-----VTTSVAAIPSV 618
+S +V DV+ G+GGWLED G + V TS + I SV
Sbjct: 530 NSGVVRDVKTMVGSGGWLEDTDMVGPQTMNKNQLVDNAESDPRRKDGGGVCTSSSCISSV 589
Query: 617 IVNADENLP------------XXXXXXXXXXXXXLKDIAINPSIWMNIIKMEQQKXXXXX 474
++ E +P LK+IA+NP++ +NI+KM QQ+
Sbjct: 590 NISGTEQIPVTGTSVPIGGELVPVKGSTAAIPDLLKNIAVNPTMLINILKMGQQQRLALE 649
Query: 473 XXXXXXXXXXXXXXXXXSTD------VVAPRTSVIGQKSVGILQTPTQTAVADEGAIVRM 312
S VV S I + G +Q Q AD+ +RM
Sbjct: 650 AQQKPVDPAKSTTYPLNSNSMLGTVPVVGAAHSGILPRPAGTVQVSPQLGTADDLGKIRM 709
Query: 311 KPRDPRRALHNTAVLKGGNVGSDQCKTGIAG---TQAMTSNLCVQRQEDQLDRKSAVTLS 141
KPRDPRR LHN A+ + G++GS+ KT + Q N +Q+QE Q+++K S
Sbjct: 710 KPRDPRRVLHNNALQRNGSMGSEHLKTNLTSIPINQETKDNQNLQKQEGQVEKKPVPLQS 769
Query: 140 TAPPDIDRQFTKNLKNIADMISV 72
A PDI FTKNLKNIAD++SV
Sbjct: 770 LALPDISMPFTKNLKNIADIVSV 792
>gb|EXB81217.1| RNA polymerase II C-terminal domain phosphatase-like 3 [Morus
notabilis]
Length = 1301
Score = 105 bits (262), Expect = 2e-20
Identities = 82/251 (32%), Positives = 115/251 (45%), Gaps = 20/251 (7%)
Frame = -3
Query: 764 DVRPSTGNGGWLEDRGTAGLPXXXXXXXXXXXXRKLEQVTTSVAAIPSVIVN-----ADE 600
DV+ ++G GGWLED GT G + S+ + I+N E
Sbjct: 627 DVKTASGVGGWLEDNGTTGPQIMNKNQLVENAEADPRK---SIHLVNGPIMNNGPNIGKE 683
Query: 599 NLPXXXXXXXXXXXXXLKDIAINPSIWMNIIKMEQQKXXXXXXXXXXXXXXXXXXXXXXS 420
+P LKDIA+NP+I+M+I+ Q+ +
Sbjct: 684 QVPVTGTSTPDALPAILKDIAVNPTIFMDILNKLGQQQLLAADAQQKSDSSKNTTHPPGT 743
Query: 419 TDVV--APRTSVIGQKSVGILQTP-------TQTAVA---DEGAIVRMKPRDPRRALHNT 276
++ AP +V K+ GILQTP +Q A A DE +RMKPRDPRR LH
Sbjct: 744 NSILGAAPLVNVAPSKASGILQTPAVSLPTTSQVATASMQDELGKIRMKPRDPRRVLHGN 803
Query: 275 AVLKGGNVGSDQCK---TGIAGTQAMTSNLCVQRQEDQLDRKSAVTLSTAPPDIDRQFTK 105
+ K ++G +Q K + ++ T NL QE Q D+K + PDI RQFTK
Sbjct: 804 MLQKSWSLGHEQFKPIVSSVSCTPGNKDNLNGPVQEGQADKKQVPSQLVVQPDIARQFTK 863
Query: 104 NLKNIADMISV 72
NL+NIAD++SV
Sbjct: 864 NLRNIADLMSV 874
>ref|XP_002304648.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
gi|550343308|gb|EEE79627.2| hypothetical protein
POPTR_0003s16280g [Populus trichocarpa]
Length = 1247
Score = 104 bits (260), Expect = 3e-20
Identities = 83/264 (31%), Positives = 113/264 (42%), Gaps = 30/264 (11%)
Frame = -3
Query: 773 IVSDVRPSTGNGGWLEDRGTAGLPXXXXXXXXXXXXRKLEQVTTSVAA------------ 630
+V D+R TG GGWLED A P +++ V
Sbjct: 581 VVRDIRSMTGTGGWLEDTDMAE-PQTVNKNQWAENAEPGQRINNGVVCPSTGSVMSSVSC 639
Query: 629 -----IPSVIVN--ADENLPXXXXXXXXXXXXXLKDIAINPSIWMNIIKMEQQ------- 492
+P + +N A LKDI +NP++ +NI+KM QQ
Sbjct: 640 SGNVQVPVMGINTIAGSEQAPVTSTTTASLPDLLKDITVNPTMLINILKMGQQQRLALDG 699
Query: 491 --KXXXXXXXXXXXXXXXXXXXXXXSTDVVAPRTSVIGQKSVGILQTPTQTAVADEGAIV 318
K + V+ S I +S G Q P+Q A DE +
Sbjct: 700 QQKLADPAKSTSHPPSSNTVLGAIPEVNAVSSLPSGILPRSAGKAQGPSQIATTDESGKI 759
Query: 317 RMKPRDPRRALHNTAVLKGGNVGSDQCKTG--IAGTQAMTSNLCVQRQEDQLDRKSAVTL 144
RMKPRDPRR LHN A+ + G++GS+Q KT + TQ N +Q+QE + K V
Sbjct: 760 RMKPRDPRRVLHNNALQRAGSLGSEQFKTTTLTSTTQGTKDNQNLQKQEGLAELKPVV-- 817
Query: 143 STAPPDIDRQFTKNLKNIADMISV 72
PPDI FTK+LKNIAD++SV
Sbjct: 818 ---PPDISSPFTKSLKNIADIVSV 838
>ref|XP_002304714.2| hypothetical protein POPTR_0003s16280g [Populus trichocarpa]
gi|550343307|gb|EEE79693.2| hypothetical protein
POPTR_0003s16280g [Populus trichocarpa]
Length = 1030
Score = 104 bits (260), Expect = 3e-20
Identities = 83/264 (31%), Positives = 113/264 (42%), Gaps = 30/264 (11%)
Frame = -3
Query: 773 IVSDVRPSTGNGGWLEDRGTAGLPXXXXXXXXXXXXRKLEQVTTSVAA------------ 630
+V D+R TG GGWLED A P +++ V
Sbjct: 364 VVRDIRSMTGTGGWLEDTDMAE-PQTVNKNQWAENAEPGQRINNGVVCPSTGSVMSSVSC 422
Query: 629 -----IPSVIVN--ADENLPXXXXXXXXXXXXXLKDIAINPSIWMNIIKMEQQ------- 492
+P + +N A LKDI +NP++ +NI+KM QQ
Sbjct: 423 SGNVQVPVMGINTIAGSEQAPVTSTTTASLPDLLKDITVNPTMLINILKMGQQQRLALDG 482
Query: 491 --KXXXXXXXXXXXXXXXXXXXXXXSTDVVAPRTSVIGQKSVGILQTPTQTAVADEGAIV 318
K + V+ S I +S G Q P+Q A DE +
Sbjct: 483 QQKLADPAKSTSHPPSSNTVLGAIPEVNAVSSLPSGILPRSAGKAQGPSQIATTDESGKI 542
Query: 317 RMKPRDPRRALHNTAVLKGGNVGSDQCKTG--IAGTQAMTSNLCVQRQEDQLDRKSAVTL 144
RMKPRDPRR LHN A+ + G++GS+Q KT + TQ N +Q+QE + K V
Sbjct: 543 RMKPRDPRRVLHNNALQRAGSLGSEQFKTTTLTSTTQGTKDNQNLQKQEGLAELKPVV-- 600
Query: 143 STAPPDIDRQFTKNLKNIADMISV 72
PPDI FTK+LKNIAD++SV
Sbjct: 601 ---PPDISSPFTKSLKNIADIVSV 621
>gb|EOX99661.1| RNA polymerase II C-terminal domain phosphatase-like 3, putative
[Theobroma cacao]
Length = 1290
Score = 104 bits (260), Expect = 3e-20
Identities = 80/256 (31%), Positives = 115/256 (44%), Gaps = 22/256 (8%)
Frame = -3
Query: 773 IVSDVRPSTGNGGWLEDRGTAGLPXXXXXXXXXXXXR---KLEQVTTSVAAIP---SVIV 612
+ DV+ +G GGWLED G K++ TS + + ++ V
Sbjct: 626 VARDVQTVSGIGGWLEDTDAIGSQITNRNQTAENLESNSRKMDNGVTSSSTLSGKTNITV 685
Query: 611 NADENLPXXXXXXXXXXXXXLKDIAINPSIWMNIIKM---------EQQKXXXXXXXXXX 459
+E +P KDIA+NP++ +NI+KM QQK
Sbjct: 686 GTNEQVPVTSTSTPSLPALL-KDIAVNPTMLINILKMGQQQRLGAEAQQKSPDPVKSTFH 744
Query: 458 XXXXXXXXXXXXSTDVV-APRTSVIGQKSVGILQTPT---QTAVADEGAIVRMKPRDPRR 291
ST+V+ +P + + S GI P Q DE +RMKPRDPRR
Sbjct: 745 QPSSNSLLGVVSSTNVIPSPSVNNVPSISSGISSKPAGNLQVPSPDESGKIRMKPRDPRR 804
Query: 290 ALHNTAVLKGGNVGSDQCKTG---IAGTQAMTSNLCVQRQEDQLDRKSAVTLSTAPPDID 120
LH ++ + G++G DQ KT + TQ NL Q+ + Q + K + PPDI
Sbjct: 805 VLHGNSLQRSGSMGLDQLKTNGALTSSTQGSKDNLNAQKLDSQTESKPMQSQLVPPPDIT 864
Query: 119 RQFTKNLKNIADMISV 72
+QFT NLKNIAD++SV
Sbjct: 865 QQFTNNLKNIADIMSV 880
>ref|XP_006438860.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
gi|568858958|ref|XP_006483010.1| PREDICTED: RNA
polymerase II C-terminal domain phosphatase-like 3-like
[Citrus sinensis] gi|557541056|gb|ESR52100.1|
hypothetical protein CICLE_v10030535mg [Citrus
clementina]
Length = 1234
Score = 102 bits (255), Expect = 1e-19
Identities = 81/244 (33%), Positives = 113/244 (46%), Gaps = 7/244 (2%)
Frame = -3
Query: 782 DSIIVSDVRPSTGNGGWLEDRGTAG---LPXXXXXXXXXXXXRKLEQVTTS--VAAIPSV 618
+S +V D + G+GGWLED + RKL+ TS + P+V
Sbjct: 589 NSGVVRDEKNIYGSGGWLEDTDMFEPQIMNRNLLVDSAESNSRKLDNGATSPITSGTPNV 648
Query: 617 IVNADENLPXXXXXXXXXXXXXLKDIAINPSIWMNIIKMEQQKXXXXXXXXXXXXXXXXX 438
+V+ +E P LKDIA+NP++ +NI+KM QQ+
Sbjct: 649 VVSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLNILKMGQQQKLAADAQQKSNDSSMNT 708
Query: 437 XXXXXSTDVVAPRTSVIGQKSVGILQTPTQTAVADEGAIVRMKPRDPRRALHNTAVLKGG 258
+ + P SV GIL P DE VRMKPRDPRR LH A+ + G
Sbjct: 709 MHPPIPSSI--PPVSVTCSIPSGILSKPM-----DELGKVRMKPRDPRRVLHGNALQRSG 761
Query: 257 NVGSDQCKTGIAG--TQAMTSNLCVQRQEDQLDRKSAVTLSTAPPDIDRQFTKNLKNIAD 84
++G + G + TQ NL Q+Q + K ++ S PDI +QFTKNLK+IAD
Sbjct: 762 SLGPEFKTDGPSAPCTQGSKENLNFQKQLGAPEAKPVLSQSVLQPDITQQFTKNLKHIAD 821
Query: 83 MISV 72
+SV
Sbjct: 822 FMSV 825
>ref|XP_006438858.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
gi|557541054|gb|ESR52098.1| hypothetical protein
CICLE_v10030535mg [Citrus clementina]
Length = 1208
Score = 102 bits (255), Expect = 1e-19
Identities = 81/244 (33%), Positives = 113/244 (46%), Gaps = 7/244 (2%)
Frame = -3
Query: 782 DSIIVSDVRPSTGNGGWLEDRGTAG---LPXXXXXXXXXXXXRKLEQVTTS--VAAIPSV 618
+S +V D + G+GGWLED + RKL+ TS + P+V
Sbjct: 589 NSGVVRDEKNIYGSGGWLEDTDMFEPQIMNRNLLVDSAESNSRKLDNGATSPITSGTPNV 648
Query: 617 IVNADENLPXXXXXXXXXXXXXLKDIAINPSIWMNIIKMEQQKXXXXXXXXXXXXXXXXX 438
+V+ +E P LKDIA+NP++ +NI+KM QQ+
Sbjct: 649 VVSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLNILKMGQQQKLAADAQQKSNDSSMNT 708
Query: 437 XXXXXSTDVVAPRTSVIGQKSVGILQTPTQTAVADEGAIVRMKPRDPRRALHNTAVLKGG 258
+ + P SV GIL P DE VRMKPRDPRR LH A+ + G
Sbjct: 709 MHPPIPSSI--PPVSVTCSIPSGILSKPM-----DELGKVRMKPRDPRRVLHGNALQRSG 761
Query: 257 NVGSDQCKTGIAG--TQAMTSNLCVQRQEDQLDRKSAVTLSTAPPDIDRQFTKNLKNIAD 84
++G + G + TQ NL Q+Q + K ++ S PDI +QFTKNLK+IAD
Sbjct: 762 SLGPEFKTDGPSAPCTQGSKENLNFQKQLGAPEAKPVLSQSVLQPDITQQFTKNLKHIAD 821
Query: 83 MISV 72
+SV
Sbjct: 822 FMSV 825
>ref|XP_006438857.1| hypothetical protein CICLE_v10030535mg [Citrus clementina]
gi|567892677|ref|XP_006438859.1| hypothetical protein
CICLE_v10030535mg [Citrus clementina]
gi|557541053|gb|ESR52097.1| hypothetical protein
CICLE_v10030535mg [Citrus clementina]
gi|557541055|gb|ESR52099.1| hypothetical protein
CICLE_v10030535mg [Citrus clementina]
Length = 1118
Score = 102 bits (255), Expect = 1e-19
Identities = 81/244 (33%), Positives = 113/244 (46%), Gaps = 7/244 (2%)
Frame = -3
Query: 782 DSIIVSDVRPSTGNGGWLEDRGTAG---LPXXXXXXXXXXXXRKLEQVTTS--VAAIPSV 618
+S +V D + G+GGWLED + RKL+ TS + P+V
Sbjct: 589 NSGVVRDEKNIYGSGGWLEDTDMFEPQIMNRNLLVDSAESNSRKLDNGATSPITSGTPNV 648
Query: 617 IVNADENLPXXXXXXXXXXXXXLKDIAINPSIWMNIIKMEQQKXXXXXXXXXXXXXXXXX 438
+V+ +E P LKDIA+NP++ +NI+KM QQ+
Sbjct: 649 VVSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLNILKMGQQQKLAADAQQKSNDSSMNT 708
Query: 437 XXXXXSTDVVAPRTSVIGQKSVGILQTPTQTAVADEGAIVRMKPRDPRRALHNTAVLKGG 258
+ + P SV GIL P DE VRMKPRDPRR LH A+ + G
Sbjct: 709 MHPPIPSSI--PPVSVTCSIPSGILSKPM-----DELGKVRMKPRDPRRVLHGNALQRSG 761
Query: 257 NVGSDQCKTGIAG--TQAMTSNLCVQRQEDQLDRKSAVTLSTAPPDIDRQFTKNLKNIAD 84
++G + G + TQ NL Q+Q + K ++ S PDI +QFTKNLK+IAD
Sbjct: 762 SLGPEFKTDGPSAPCTQGSKENLNFQKQLGAPEAKPVLSQSVLQPDITQQFTKNLKHIAD 821
Query: 83 MISV 72
+SV
Sbjct: 822 FMSV 825
>ref|XP_002297869.2| CTD phosphatase-like protein 3 [Populus trichocarpa]
gi|550347145|gb|EEE82674.2| CTD phosphatase-like protein
3 [Populus trichocarpa]
Length = 1190
Score = 97.4 bits (241), Expect = 5e-18
Identities = 81/254 (31%), Positives = 110/254 (43%), Gaps = 21/254 (8%)
Frame = -3
Query: 770 VSDVRPSTGNGGWLEDRGTAGLPXXXXXXXXXXXXRK-----------LEQVTTSVAAIP 624
V D+ TG GGWLED A + +T S A
Sbjct: 546 VRDIESMTGTGGWLEDTDMAEPQTVNKNQWAENSNVNGSGNAQSPFMGISNITGSEQA-- 603
Query: 623 SVIVNADENLPXXXXXXXXXXXXXLKDIAINPSIWMNIIKMEQQKXXXXXXXXXXXXXXX 444
V A +LP KDIA+NP++ +NI+KM QQ+
Sbjct: 604 QVTSTATTSLPDLL-----------KDIAVNPTMLINILKMGQQQRLALDGQQTLSDPAK 652
Query: 443 XXXXXXXSTDVVA--PRTSVIGQKSVGILQ------TPTQTAVADEGAIVRMKPRDPRRA 288
S V+ P +V + GI P+Q A +DE +RMKPRDPRR
Sbjct: 653 STSHPPISNTVLGAIPTVNVASSQPSGIFPRPAGTPVPSQIATSDESGKIRMKPRDPRRF 712
Query: 287 LHNTAVLKGGNVGSDQCKTG--IAGTQAMTSNLCVQRQEDQLDRKSAVTLSTAPPDIDRQ 114
LHN ++ + G++GS+Q KT TQ + VQ+QE + K T PPDI
Sbjct: 713 LHNNSLQRAGSMGSEQFKTTTLTPTTQGTKDDQNVQKQEGLAELK-----PTVPPDISFP 767
Query: 113 FTKNLKNIADMISV 72
FTK+L+NIAD++SV
Sbjct: 768 FTKSLENIADILSV 781
>ref|XP_004157633.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain
phosphatase-like 3-like [Cucumis sativus]
Length = 1249
Score = 95.9 bits (237), Expect = 1e-17
Identities = 81/248 (32%), Positives = 111/248 (44%), Gaps = 12/248 (4%)
Frame = -3
Query: 779 SIIVSDVRPSTGNGGWLEDRGTAGLPXXXXXXXXXXXXRKLEQVTTSVAAIPSVIVNADE 600
++ SDVR +G+GGWLED AG E T + + + + +E
Sbjct: 614 AVAASDVRAVSGSGGWLEDTMPAG-----PRLFNRNQMEIAEANATEKSNVTNNSGSGNE 668
Query: 599 NLPXXXXXXXXXXXXXLKDIAINPSIWMNIIKMEQQKXXXXXXXXXXXXXXXXXXXXXXS 420
P LKDI +NP++ +N++KM QQ+
Sbjct: 669 CTPTVNNSNDASLPSLLKDIVVNPTMLLNLLKMSQQQQLAAELKLKSSEPEKNAICPTSL 728
Query: 419 TD-------VVAP-RTSVIGQKSVGILQTPTQTAVADEGAIVRMKPRDPRRALHNTAVLK 264
+ AP TS I Q+S G D+ VRMKPRDPRR LH ++ K
Sbjct: 729 NPCQGSSPLINAPVATSGILQQSAGTPSASPVVGRQDDLGKVRMKPRDPRRVLHGNSLQK 788
Query: 263 GGNVGSDQCKTGIAGTQAMTSNL----CVQRQEDQLDRKSAVTLSTAPPDIDRQFTKNLK 96
G++G+DQ K G+ T + T +QE Q D K A + T PDI RQFT NLK
Sbjct: 789 VGSLGNDQLK-GVVPTASNTEGSRDIPNGHKQEGQGDSKLA-SSQTILPDIGRQFTNNLK 846
Query: 95 NIADMISV 72
NIAD++SV
Sbjct: 847 NIADIMSV 854
>ref|XP_004140651.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Cucumis sativus]
Length = 1249
Score = 95.9 bits (237), Expect = 1e-17
Identities = 81/248 (32%), Positives = 111/248 (44%), Gaps = 12/248 (4%)
Frame = -3
Query: 779 SIIVSDVRPSTGNGGWLEDRGTAGLPXXXXXXXXXXXXRKLEQVTTSVAAIPSVIVNADE 600
++ SDVR +G+GGWLED AG E T + + + + +E
Sbjct: 614 AVAASDVRAVSGSGGWLEDTMPAG-----PRLFNRNQMEIAEANATEKSNVTNNSGSGNE 668
Query: 599 NLPXXXXXXXXXXXXXLKDIAINPSIWMNIIKMEQQKXXXXXXXXXXXXXXXXXXXXXXS 420
P LKDI +NP++ +N++KM QQ+
Sbjct: 669 CTPTVNNSNDASLPSLLKDIVVNPTMLLNLLKMSQQQQLAAELKLKSSEPEKNAICPTSL 728
Query: 419 TD-------VVAP-RTSVIGQKSVGILQTPTQTAVADEGAIVRMKPRDPRRALHNTAVLK 264
+ AP TS I Q+S G D+ VRMKPRDPRR LH ++ K
Sbjct: 729 NPCQGSSPLINAPVATSGILQQSAGTPSASPVVGRQDDLGKVRMKPRDPRRVLHGNSLQK 788
Query: 263 GGNVGSDQCKTGIAGTQAMTSNL----CVQRQEDQLDRKSAVTLSTAPPDIDRQFTKNLK 96
G++G+DQ K G+ T + T +QE Q D K A + T PDI RQFT NLK
Sbjct: 789 VGSLGNDQLK-GVVPTASNTEGSRDIPNGHKQEGQGDSKLA-SSQTILPDIGRQFTNNLK 846
Query: 95 NIADMISV 72
NIAD++SV
Sbjct: 847 NIADIMSV 854
>ref|XP_004310239.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
3-like [Fragaria vesca subsp. vesca]
Length = 1230
Score = 93.6 bits (231), Expect = 7e-17
Identities = 76/252 (30%), Positives = 113/252 (44%), Gaps = 15/252 (5%)
Frame = -3
Query: 782 DSIIVSDVRPSTGNGGWLEDRGTAGLPXXXXXXXXXXXXRKLEQVTTSVAAIPSVIVN-- 609
+S++ + S GNG WLED + G P + +V++ P +
Sbjct: 579 NSVVGWGAKTSFGNGVWLEDGSSVG-PHLINRNQTVEKKEADPRKMVNVSSSPGTVEGNS 637
Query: 608 -----ADENLPXXXXXXXXXXXXXLKDIAINPSIWMNIIKMEQQKXXXXXXXXXXXXXXX 444
A+E +P KDIA+NP++ +NI+K+ + +
Sbjct: 638 NGQNTANEKVPLVAPSLVSLPAIF-KDIAVNPTMLVNILKLAEAQQNAAAPARKESLTYP 696
Query: 443 XXXXXXXSTDVVAPRTSVIGQKSVGILQTPT---QTAVADEGAIVRMKPRDPRRALHNTA 273
T + S K+ G L TPT Q DE +RMK RDPRR LH A
Sbjct: 697 PSSSSIPGTAALVNDPS----KTSGALLTPTICSQKTPTDEAGKIRMKLRDPRRLLHGNA 752
Query: 272 VLKGGNVGSDQCKT---GIAGTQAMTSNLCVQRQEDQLDRKSAVTLSTA--PPDIDRQFT 108
+ G+VG +Q + ++ +QA ++ ++Q+ Q D S + S A PDI QFT
Sbjct: 753 LQNSGSVGHEQSRNIVPPLSSSQANNDDMNGKKQDSQADNNSVTSQSGALGAPDIASQFT 812
Query: 107 KNLKNIADMISV 72
KNLKNIAD+ISV
Sbjct: 813 KNLKNIADIISV 824