BLASTX nr result
ID: Atropa21_contig00027444
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00027444
(1134 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006355780.1| PREDICTED: pentatricopeptide repeat-containi... 515 e-143
ref|XP_004244755.1| PREDICTED: pentatricopeptide repeat-containi... 513 e-143
ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containi... 359 1e-96
gb|EOY05819.1| Pentatricopeptide repeat superfamily protein [The... 346 9e-93
ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containi... 338 2e-90
ref|XP_004488126.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 315 3e-83
ref|XP_003595326.1| Pentatricopeptide repeat-containing protein ... 314 5e-83
ref|XP_006403187.1| hypothetical protein EUTSA_v10003201mg [Eutr... 290 7e-76
ref|NP_199192.1| pentatricopeptide repeat-containing protein [Ar... 285 2e-74
gb|EPS61188.1| hypothetical protein M569_13609 [Genlisea aurea] 280 6e-73
ref|XP_006280433.1| hypothetical protein CARUB_v10026365mg [Caps... 278 2e-72
ref|XP_002863633.1| pentatricopeptide repeat-containing protein ... 274 4e-71
ref|XP_006664303.1| PREDICTED: pentatricopeptide repeat-containi... 177 7e-42
gb|ABA96368.1| pentatricopeptide, putative, expressed [Oryza sat... 174 5e-41
gb|EMS58725.1| hypothetical protein TRIUR3_04390 [Triticum urartu] 173 1e-40
gb|ABA91346.1| pentatricopeptide, putative, expressed [Oryza sat... 172 2e-40
gb|EMJ15830.1| hypothetical protein PRUPE_ppa002950mg [Prunus pe... 170 9e-40
ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containi... 169 2e-39
ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi... 168 4e-39
gb|EOX91580.1| Tetratricopeptide repeat (TPR)-like superfamily p... 167 6e-39
>ref|XP_006355780.1| PREDICTED: pentatricopeptide repeat-containing protein At5g43790-like
[Solanum tuberosum]
Length = 602
Score = 515 bits (1326), Expect = e-143
Identities = 256/314 (81%), Positives = 273/314 (86%)
Frame = +3
Query: 192 MNTLSPKSAHPIFKLIEQCKKISTLKQVHAQMITTGLILHTYPLXXXXXXXXXXXXXXXX 371
MNTLSPKSAHPIFKLIEQCK I+TLKQVHAQMITTGLI HTYPL
Sbjct: 1 MNTLSPKSAHPIFKLIEQCKNIATLKQVHAQMITTGLIFHTYPLSRILISSSTIDATISY 60
Query: 372 XXXXFNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTTLIPNSYTYPSLFK 551
FN VTNPTIFLFNTLISSSL+RKKDDQ+ FALALY RILMQTTLIPNSYTYPSLFK
Sbjct: 61 ALSIFNHVTNPTIFLFNTLISSSLSRKKDDQTQFALALYNRILMQTTLIPNSYTYPSLFK 120
Query: 552 ACSSQPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLA 731
ACSSQPWLQHGRALHTH+LKFLEPPYDHFVQASLLNFYSKC +LGVSR LFDQIT PDLA
Sbjct: 121 ACSSQPWLQHGRALHTHVLKFLEPPYDHFVQASLLNFYSKCGELGVSRFLFDQITGPDLA 180
Query: 732 SWNSILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPNEVSVVVLISSC 911
SWNSIL AYAHN V YE++ D+ YDS++LSLE L LF QMQKSLT PNEVS+V LIS+C
Sbjct: 181 SWNSILAAYAHNYFVYYESNLDSVYDSSSLSLEVLLLFRQMQKSLTCPNEVSLVALISAC 240
Query: 912 ADLGALSQGLWAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRMLERDTYCYN 1091
ADLGALSQG+WAHSYVL NGLKLNR+VG ALIA+YANCGRLDFARQVFD++LERDTYCYN
Sbjct: 241 ADLGALSQGIWAHSYVLRNGLKLNRYVGAALIAVYANCGRLDFARQVFDQLLERDTYCYN 300
Query: 1092 AMIRGLAVHGLGLE 1133
AMIRGLAVHGLGLE
Sbjct: 301 AMIRGLAVHGLGLE 314
>ref|XP_004244755.1| PREDICTED: pentatricopeptide repeat-containing protein At5g43790-like
[Solanum lycopersicum]
Length = 602
Score = 513 bits (1320), Expect = e-143
Identities = 253/314 (80%), Positives = 272/314 (86%)
Frame = +3
Query: 192 MNTLSPKSAHPIFKLIEQCKKISTLKQVHAQMITTGLILHTYPLXXXXXXXXXXXXXXXX 371
MNTLSPKSAHPIFK+IEQCK I+TLKQVHAQMITTGLI HTYPL
Sbjct: 1 MNTLSPKSAHPIFKIIEQCKNIATLKQVHAQMITTGLIFHTYPLSRILISSSTIDATISY 60
Query: 372 XXXXFNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTTLIPNSYTYPSLFK 551
FN VTNPTIFLFNTLISSSL+RKKDDQ+HFALALY RIL QTTLIPNSYTYPSLFK
Sbjct: 61 ALSIFNHVTNPTIFLFNTLISSSLSRKKDDQTHFALALYNRILTQTTLIPNSYTYPSLFK 120
Query: 552 ACSSQPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLA 731
AC SQPW+QHGRALHTH+LKFLEPPYDHFVQASLLNFYSKC +LGV+R LFDQIT PDLA
Sbjct: 121 ACGSQPWIQHGRALHTHVLKFLEPPYDHFVQASLLNFYSKCGELGVARFLFDQITGPDLA 180
Query: 732 SWNSILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPNEVSVVVLISSC 911
SWNSIL AYAHN SV YEA D+ YDS++LSLE L LFSQMQKSLT PNEVS+V LIS+C
Sbjct: 181 SWNSILAAYAHNYSVYYEADLDSVYDSSSLSLEVLLLFSQMQKSLTCPNEVSLVALISAC 240
Query: 912 ADLGALSQGLWAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRMLERDTYCYN 1091
ADLGALS G+WAHSYVL N LKLNRFVGTALIA+Y+NCGRLDFARQVFD++LERDTYCYN
Sbjct: 241 ADLGALSHGIWAHSYVLRNDLKLNRFVGTALIAVYSNCGRLDFARQVFDQLLERDTYCYN 300
Query: 1092 AMIRGLAVHGLGLE 1133
AMIRGLAVHGLG+E
Sbjct: 301 AMIRGLAVHGLGVE 314
>ref|XP_002283562.1| PREDICTED: pentatricopeptide repeat-containing protein At5g43790-like
[Vitis vinifera]
Length = 590
Score = 359 bits (921), Expect = 1e-96
Identities = 185/308 (60%), Positives = 221/308 (71%)
Frame = +3
Query: 204 SPKSAHPIFKLIEQCKKISTLKQVHAQMITTGLILHTYPLXXXXXXXXXXXXXXXXXXXX 383
+P S HP +L+E+CK + TLKQVHA MITTGLI HTYPL
Sbjct: 5 NPSSNHPTLQLLEKCKTLDTLKQVHAHMITTGLIFHTYPLSRILLISSTIVFTHALSI-- 62
Query: 384 FNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTTLIPNSYTYPSLFKACSS 563
FN + NPTIFL+NTLISS LA K +H A +LY+R+L TTL PN +T+PSLFKAC S
Sbjct: 63 FNHIPNPTIFLYNTLISS-LANIKP-HTHIAFSLYSRVLTHTTLKPNGFTFPSLFKACGS 120
Query: 564 QPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLASWNS 743
QPWL+HGRALHTH+LKFLEP D FVQA+LLN+Y+KC K+G R LF+QI+KPDLASWNS
Sbjct: 121 QPWLRHGRALHTHVLKFLEPTCDPFVQAALLNYYAKCGKVGACRYLFNQISKPDLASWNS 180
Query: 744 ILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPNEVSVVVLISSCADLG 923
IL+AY HN+ E +LSLE L LF +MQKSL + NEV++V LIS+CA+LG
Sbjct: 181 ILSAYVHNSGAICE--------DVSLSLEVLTLFIEMQKSLIKANEVTLVALISACAELG 232
Query: 924 ALSQGLWAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRMLERDTYCYNAMIR 1103
ALSQG WAH YVL + LKLN FVGTALI MY+ CG LD A Q+FD++ RDT CYNAMI
Sbjct: 233 ALSQGAWAHVYVLKHNLKLNHFVGTALIDMYSKCGCLDLACQLFDQLPHRDTLCYNAMIG 292
Query: 1104 GLAVHGLG 1127
G A+HG G
Sbjct: 293 GFAIHGYG 300
>gb|EOY05819.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 601
Score = 346 bits (888), Expect = 9e-93
Identities = 175/314 (55%), Positives = 219/314 (69%), Gaps = 2/314 (0%)
Frame = +3
Query: 192 MNTLSPKSAHPIFKLIEQCKKISTLKQVHAQMITTGLILHTYPLXXXXXXXXXXXXXXXX 371
MN+ +P HP + +CK +LKQVHAQMITTGL LHTYPL
Sbjct: 1 MNSSNPIFTHPTLNYLSKCKTFYSLKQVHAQMITTGLTLHTYPLSKLLYVSATLALSHAL 60
Query: 372 XXXXFNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTTLIPNSYTYPSLFK 551
FNQ+ NPTIFLFNTLISS + ++ +H A +LY RIL T+ PNS+TYPSLFK
Sbjct: 61 AI--FNQIPNPTIFLFNTLISSIITNQRS-HTHLAFSLYERILCYETVKPNSHTYPSLFK 117
Query: 552 ACSSQPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLA 731
AC S PWL HG ALH H+LKFLEP YD+FV ASLLNFY+ KLGV+R +FD I+ PDLA
Sbjct: 118 ACGSHPWLHHGLALHAHVLKFLEPTYDNFVHASLLNFYANYGKLGVARYMFDHISNPDLA 177
Query: 732 SWNSILTAYAHNTSVEYEASPDN--AYDSTNLSLEALFLFSQMQKSLTRPNEVSVVVLIS 905
+WNSIL+AYA + S Y S ++ + ++LSLEAL+LF++MQ SL +PNEV++ LIS
Sbjct: 178 TWNSILSAYARSDSSSYYVSNNSNITSEDSSLSLEALYLFNEMQHSLVKPNEVTLAALIS 237
Query: 906 SCADLGALSQGLWAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRMLERDTYC 1085
+CA+LGAL+QG WAH YVL +K+N +VGTALI MY+ CG L A Q+FD++ ERD C
Sbjct: 238 ACANLGALTQGTWAHVYVLKYSIKVNYYVGTALIDMYSKCGCLGLAYQLFDQLPERDVLC 297
Query: 1086 YNAMIRGLAVHGLG 1127
YNAMI G +HG G
Sbjct: 298 YNAMIGGFGIHGYG 311
>ref|XP_003535689.1| PREDICTED: pentatricopeptide repeat-containing protein At5g43790-like
[Glycine max]
Length = 591
Score = 338 bits (868), Expect = 2e-90
Identities = 172/303 (56%), Positives = 213/303 (70%)
Frame = +3
Query: 219 HPIFKLIEQCKKISTLKQVHAQMITTGLILHTYPLXXXXXXXXXXXXXXXXXXXXFNQVT 398
HPI + +++C ++TLKQVHAQM+TTGL TY L FN +
Sbjct: 6 HPILQKLQKCHNLNTLKQVHAQMLTTGLSFQTYYLSHLLNTSSKFASTYAFTI--FNHIP 63
Query: 399 NPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTTLIPNSYTYPSLFKACSSQPWLQ 578
NPT+FL+NTLISS DQ H A +LY IL TL PNS+T+PSLFKAC+S PWLQ
Sbjct: 64 NPTLFLYNTLISS--LTHHSDQIHLAFSLYNHILTHKTLQPNSFTFPSLFKACASHPWLQ 121
Query: 579 HGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLASWNSILTAY 758
HG LH H+LKFL+PPYD FVQ SLLNFY+K KL VSR LFDQI++PDLA+WN++L AY
Sbjct: 122 HGPPLHAHVLKFLQPPYDPFVQNSLLNFYAKYGKLCVSRYLFDQISEPDLATWNTMLAAY 181
Query: 759 AHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPNEVSVVVLISSCADLGALSQG 938
A + S S +++ ++SLEAL LF MQ S +PNEV++V LIS+C++LGALSQG
Sbjct: 182 AQSAS---HVSYSTSFEDADMSLEALHLFCDMQLSQIKPNEVTLVALISACSNLGALSQG 238
Query: 939 LWAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRMLERDTYCYNAMIRGLAVH 1118
WAH YVL N LKLNRFVGTAL+ MY+ CG L+ A Q+FD + +RDT+CYNAMI G AVH
Sbjct: 239 AWAHGYVLRNNLKLNRFVGTALVDMYSKCGCLNLACQLFDELSDRDTFCYNAMIGGFAVH 298
Query: 1119 GLG 1127
G G
Sbjct: 299 GHG 301
>ref|XP_004488126.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g43790-like, partial [Cicer arietinum]
Length = 632
Score = 315 bits (806), Expect = 3e-83
Identities = 165/315 (52%), Positives = 211/315 (66%), Gaps = 3/315 (0%)
Frame = +3
Query: 192 MNTLSPKSAHPIFKLIEQCKKISTLKQVHAQMITTGLILHTYPLXXXXXXXXXXXXXXXX 371
M SP HP +++C ++TLKQ+HAQ++TTGL TY L
Sbjct: 35 MKPQSPIFNHPTLLKLQKCNNLNTLKQIHAQIVTTGLSFQTYCLSHLINISSKFNLPYAC 94
Query: 372 XXXXFNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTTLIPNSYTYPSLFK 551
FN + NPTIFL+NTLISS + + + H A LY +I++ +L PNS+T+PSL K
Sbjct: 95 TI--FNYIPNPTIFLYNTLISSLI--NQHSKIHLAFKLYNKIIIHKSLQPNSFTFPSLLK 150
Query: 552 ACSSQP-WLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDL 728
AC S P W Q G LHTH+LK L+PP+DHFVQASLLNFY+K KL VSR LFDQI PDL
Sbjct: 151 ACCSNPTWFQFGPKLHTHVLKLLQPPFDHFVQASLLNFYAKYGKLCVSRYLFDQINGPDL 210
Query: 729 ASWNSILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPNEVSVVVLISS 908
A+WN IL +YA++ S +D NLSLEAL+LF +MQ + +PNEV++V LIS+
Sbjct: 211 ATWNIILGSYANSVS---HHGYSTRFDDANLSLEALYLFHEMQVAQIKPNEVTIVALISA 267
Query: 909 CADLGALSQGLWAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRMLE--RDTY 1082
C++LGALSQG W H +VL N LK+NRFVGTAL+ MY+ CG L+ A Q+FD M E +DT+
Sbjct: 268 CSNLGALSQGFWFHCFVLRNKLKMNRFVGTALVDMYSKCGCLNLACQLFDEMPESNKDTF 327
Query: 1083 CYNAMIRGLAVHGLG 1127
CYNAMI G A+HG G
Sbjct: 328 CYNAMIGGFALHGYG 342
>ref|XP_003595326.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484374|gb|AES65577.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 740
Score = 314 bits (804), Expect = 5e-83
Identities = 163/322 (50%), Positives = 219/322 (68%), Gaps = 7/322 (2%)
Frame = +3
Query: 183 AHHMNTLSPKSA---HPIFKLIEQ-CKKISTLKQVHAQMITTGLILHTYPLXXXXXXXXX 350
++ ++ + PK+ HP + ++Q C +TLKQ+H Q+ITTGL TY L
Sbjct: 134 SNFLDFMKPKNHIFNHPTLQTLQQKCNNFNTLKQIHTQIITTGLSFQTYCLSHLIKISSK 193
Query: 351 XXXXXXXXXXXFNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTTLIPNSY 530
FN ++NPTIFL+NTLISS + + +Q H A +LY +IL L PNS+
Sbjct: 194 FNLPYAFKI--FNYISNPTIFLYNTLISSLINQTNQNQIHLAFSLYNKILTNKNLQPNSF 251
Query: 531 TYPSLFKAC-SSQPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFD 707
T+PSLFKAC S+Q W +G LHTH+LKFL+PP+D+FVQASLLNFY+K K+ VSR +FD
Sbjct: 252 TFPSLFKACCSNQSWFHYGPLLHTHVLKFLQPPFDNFVQASLLNFYAKYGKMCVSRYIFD 311
Query: 708 QITKPDLASWNSILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPNEVS 887
+I +PDLA+WN IL AYA ++S S N++D + SLE+L+LF MQ RPNEV+
Sbjct: 312 RINEPDLATWNVILNAYARSSSYH---SYSNSFDDADFSLESLYLFRDMQVIGIRPNEVT 368
Query: 888 VVVLISSCADLGALSQGLWAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRML 1067
+V LIS+C++LGA+SQG W H +VL N +K+NRFVGTA + MY+ CG L+ A QVFD+M
Sbjct: 369 IVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQVFDKMP 428
Query: 1068 E--RDTYCYNAMIRGLAVHGLG 1127
E RD++CY AMI G AVHG G
Sbjct: 429 ENDRDSFCYTAMIGGFAVHGYG 450
>ref|XP_006403187.1| hypothetical protein EUTSA_v10003201mg [Eutrema salsugineum]
gi|557104300|gb|ESQ44640.1| hypothetical protein
EUTSA_v10003201mg [Eutrema salsugineum]
Length = 467
Score = 290 bits (742), Expect = 7e-76
Identities = 154/317 (48%), Positives = 201/317 (63%), Gaps = 3/317 (0%)
Frame = +3
Query: 192 MNTLSPKSAHPIFKLIEQCKKISTLKQVHAQMITTGLILHTYPLXXXXXXXXXXXXXXXX 371
M + S + H LI +CK + LKQ+HAQ +T GL HT+PL
Sbjct: 1 MTSPSTSNNHRCLNLISKCKTLENLKQIHAQFLTIGLSHHTFPLSKLLLLSSTVCLSYAL 60
Query: 372 XXXXFNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTTLIPNSYTYPSLFK 551
F ++ NP++FL+NTLISS ++ + Q+H A +LY +I ++ PN +TYPSLFK
Sbjct: 61 SI--FRRIANPSVFLYNTLISSIVSNHQSSQTHLAFSLYAQIFRSVSVRPNEFTYPSLFK 118
Query: 552 ACSSQP-WLQHGRALHTHILKFLEPP-YDHFVQASLLNFYSKCRKLGVSRCLFDQITKPD 725
A W +HGRALH H+LK +EP +D FVQA+L+ FY+ C KL +R LFD+I PD
Sbjct: 119 ASGFDTRWHRHGRALHAHVLKLIEPVNHDRFVQAALVGFYANCGKLRAARSLFDRIKGPD 178
Query: 726 LASWNSILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKS-LTRPNEVSVVVLI 902
LA+WN+++ AYA++ E E+ LS EAL LF M +S L RPNEVS+V LI
Sbjct: 179 LATWNTLIAAYANSGDGESESG-------LCLSEEALRLFVDMHRSSLVRPNEVSLVALI 231
Query: 903 SSCADLGALSQGLWAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRMLERDTY 1082
SCA+LG G+WAH Y+L N L LN+FVGT+LI Y+ CG L FARQ+FD M +RD
Sbjct: 232 KSCANLGEFRGGVWAHVYLLKNNLTLNQFVGTSLIDFYSKCGCLSFARQMFDEMRDRDAS 291
Query: 1083 CYNAMIRGLAVHGLGLE 1133
CYNAMIRGLAVHG G E
Sbjct: 292 CYNAMIRGLAVHGFGKE 308
Score = 69.3 bits (168), Expect = 3e-09
Identities = 59/235 (25%), Positives = 106/235 (45%), Gaps = 8/235 (3%)
Frame = +3
Query: 384 FNQVTNPTIFLFNTLISSSLARKKDDQSHF-------ALALYTRILMQTTLIPNSYTYPS 542
F+++ P + +NTLI++ A D +S AL L+ + + + PN + +
Sbjct: 171 FDRIKGPDLATWNTLIAA-YANSGDGESESGLCLSEEALRLFVDMHRSSLVRPNEVSLVA 229
Query: 543 LFKACSSQPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKP 722
L K+C++ + G H ++LK + FV SL++FYSKC L +R +FD++
Sbjct: 230 LIKSCANLGEFRGGVWAHVYLLKN-NLTLNQFVGTSLIDFYSKCGCLSFARQMFDEMRDR 288
Query: 723 DLASWNSILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPNEVSVVVLI 902
D + +N+++ A + EA+ L+ + P+E + VV I
Sbjct: 289 DASCYNAMIRGLAVH----------------GFGKEAIKLYRSLISQGLIPDEATFVVTI 332
Query: 903 SSCADLGALSQGLWA-HSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRM 1064
S+C+ G + GL HS G++ L+ + GRL+ A + M
Sbjct: 333 SACSHSGLVEDGLQIFHSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEDFIENM 387
>ref|NP_199192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262420|sp|Q9FG85.1|PP415_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g43790 gi|10177948|dbj|BAB11307.1| unnamed protein
product [Arabidopsis thaliana]
gi|332007627|gb|AED95010.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 460
Score = 285 bits (730), Expect = 2e-74
Identities = 153/318 (48%), Positives = 200/318 (62%), Gaps = 4/318 (1%)
Frame = +3
Query: 192 MNTLSPKSAHPIFKLIEQCKKISTLKQVHAQMITTGLILHTYPLXXXXXXXXXXXXXXXX 371
M + S H LI +CK + LKQ+HAQ+IT GL HTYPL
Sbjct: 1 MTSPSTSKNHRCLNLISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYAL 60
Query: 372 XXXXFNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTT--LIPNSYTYPSL 545
Q+ NP++FL+NTLISS ++ Q+H A +LY +IL + + PN +TYPSL
Sbjct: 61 SI--LRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSL 118
Query: 546 FKACS-SQPWLQHGRALHTHILKFLEPP-YDHFVQASLLNFYSKCRKLGVSRCLFDQITK 719
FKA W +HGRALH H+LKFLEP +D FVQA+L+ FY+ C KL +R LF++I +
Sbjct: 119 FKASGFDAQWHRHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIRE 178
Query: 720 PDLASWNSILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPNEVSVVVL 899
PDLA+WN++L AYA++ ++ + E L LF +MQ RPNE+S+V L
Sbjct: 179 PDLATWNTLLAAYANSEEIDSDE-------------EVLLLFMRMQ---VRPNELSLVAL 222
Query: 900 ISSCADLGALSQGLWAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRMLERDT 1079
I SCA+LG +G+WAH YVL N L LN+FVGT+LI +Y+ CG L FAR+VFD M +RD
Sbjct: 223 IKSCANLGEFVRGVWAHVYVLKNNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDV 282
Query: 1080 YCYNAMIRGLAVHGLGLE 1133
CYNAMIRGLAVHG G E
Sbjct: 283 SCYNAMIRGLAVHGFGQE 300
Score = 66.6 bits (161), Expect = 2e-08
Identities = 52/228 (22%), Positives = 105/228 (46%), Gaps = 1/228 (0%)
Frame = +3
Query: 384 FNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTTLIPNSYTYPSLFKACSS 563
F ++ P + +NTL+++ ++ D L L+ R+ ++ PN + +L K+C++
Sbjct: 173 FERIREPDLATWNTLLAAYANSEEIDSDEEVLLLFMRMQVR----PNELSLVALIKSCAN 228
Query: 564 QPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLASWNS 743
G H ++LK + FV SL++ YSKC L +R +FD++++ D++ +N+
Sbjct: 229 LGEFVRGVWAHVYVLKN-NLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNA 287
Query: 744 ILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPNEVSVVVLISSCADLG 923
++ A + E + L+ + P+ + VV IS+C+ G
Sbjct: 288 MIRGLAVH----------------GFGQEGIELYKSLISQGLVPDSATFVVTISACSHSG 331
Query: 924 ALSQGLWA-HSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRM 1064
+ +GL +S G++ L+ + GRL+ A + +M
Sbjct: 332 LVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKM 379
>gb|EPS61188.1| hypothetical protein M569_13609 [Genlisea aurea]
Length = 478
Score = 280 bits (717), Expect = 6e-73
Identities = 149/324 (45%), Positives = 205/324 (63%), Gaps = 15/324 (4%)
Frame = +3
Query: 201 LSPKSAHPIFKLIEQCKKISTLKQVHAQMITTGLILHTYPLXXXXXXXXXXXXXXXXXXX 380
+ P HP+ L+ C + TLKQ+H Q I GLILHTYP+
Sbjct: 1 MKPSCKHPLLTLLNSCTTLHTLKQIHGQFILNGLILHTYPISRLLLVSSSLASISYTLAI 60
Query: 381 XFNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTT-LIPNSYTYPSLFKAC 557
FN+V NPTIFL+NTLISS + ++ + AL+LY +++ L PNSYT+PSLFKA
Sbjct: 61 -FNRVLNPTIFLYNTLISSCI---RNGHAQIALSLYHQVIAGPPHLEPNSYTFPSLFKAF 116
Query: 558 SSQPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLASW 737
++ +HG ALH H++KFL+ P+D+FVQ SLLNFYS+C ++ V+R FD+I PDLA+W
Sbjct: 117 GARELFRHGAALHAHVVKFLQHPHDNFVQVSLLNFYSRCGRVDVARYFFDRIVDPDLAAW 176
Query: 738 NSILTAYAH--------NTSVEYEASPDNAYDSTNLSLEALFLFSQMQK----SLTRPNE 881
NSIL+AYA + S E + + S+E L LFS MQ+ S P+E
Sbjct: 177 NSILSAYARISDYDEYFSLSCSGEEEEEEEEGIISSSMEVLNLFSLMQQKRSSSSMEPSE 236
Query: 882 VSVVVLISSCADLGALSQGLWAHSYVL--SNGLKLNRFVGTALIAMYANCGRLDFARQVF 1055
+++V LI +CA+L ALSQG WAH+Y L +N L++N F+GTALI +Y+NCG L A Q+F
Sbjct: 237 LTLVALIMACANLSALSQGTWAHAYALRDTNNLRINHFMGTALITLYSNCGSLHLASQLF 296
Query: 1056 DRMLERDTYCYNAMIRGLAVHGLG 1127
+ +DT+C+NAMIRG A+HG G
Sbjct: 297 STLPLKDTFCFNAMIRGYAIHGYG 320
>ref|XP_006280433.1| hypothetical protein CARUB_v10026365mg [Capsella rubella]
gi|482549137|gb|EOA13331.1| hypothetical protein
CARUB_v10026365mg [Capsella rubella]
Length = 461
Score = 278 bits (712), Expect = 2e-72
Identities = 153/319 (47%), Positives = 198/319 (62%), Gaps = 5/319 (1%)
Frame = +3
Query: 192 MNTLSPKSAHPIFKLIEQCKK-ISTLKQVHAQMITTGLILHTYPLXXXXXXXXXXXXXXX 368
M + S H LI +C + LKQ+HAQ+ITTGL HTYPL
Sbjct: 1 MTSPSTSKNHRCLNLIPKCNNSLQNLKQIHAQIITTGLSHHTYPLSKLLHLSSTVCLSYA 60
Query: 369 XXXXXFNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTTLI--PNSYTYPS 542
Q++NP++FL+NTLISS ++ Q+H A ALY ++ + + PN++TYPS
Sbjct: 61 LSI--LRQISNPSVFLYNTLISSIVSNHDSTQTHLAFALYDQVSSSKSNLVRPNAFTYPS 118
Query: 543 LFKACSSQP-WLQHGRALHTHILKFLEP-PYDHFVQASLLNFYSKCRKLGVSRCLFDQIT 716
LFKA P W +HGRALH H+LKFLEP +D FV+A+L+ FY+ C KL +R LF++I
Sbjct: 119 LFKASGFDPIWHRHGRALHAHVLKFLEPVSHDRFVEAALVGFYANCGKLREARSLFERIR 178
Query: 717 KPDLASWNSILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPNEVSVVV 896
PDLA+WN++L AYA++ +E + E L LF +MQ RPNEVS+V
Sbjct: 179 DPDLATWNTLLAAYANSEEIESDD-------------EVLRLFVRMQ---VRPNEVSLVA 222
Query: 897 LISSCADLGALSQGLWAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRMLERD 1076
LI SCA LG G+WAH Y+ N L LN+FVGT+LI +Y+ CG L FARQVFD M +RD
Sbjct: 223 LIKSCASLGEFWGGVWAHVYLYKNNLTLNQFVGTSLIDLYSKCGCLSFARQVFDEMSQRD 282
Query: 1077 TYCYNAMIRGLAVHGLGLE 1133
CYNAMIRGLAVHG G E
Sbjct: 283 VSCYNAMIRGLAVHGFGQE 301
Score = 68.2 bits (165), Expect = 6e-09
Identities = 54/248 (21%), Positives = 116/248 (46%), Gaps = 2/248 (0%)
Frame = +3
Query: 384 FNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTTLIPNSYTYPSLFKACSS 563
F ++ +P + +NTL+++ ++ + L L+ R+ ++ PN + +L K+C+S
Sbjct: 174 FERIRDPDLATWNTLLAAYANSEEIESDDEVLRLFVRMQVR----PNEVSLVALIKSCAS 229
Query: 564 QPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLASWNS 743
G H ++ K + FV SL++ YSKC L +R +FD++++ D++ +N+
Sbjct: 230 LGEFWGGVWAHVYLYKN-NLTLNQFVGTSLIDLYSKCGCLSFARQVFDEMSQRDVSCYNA 288
Query: 744 ILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPNEVSVVVLISSCADLG 923
++ A + EA+ ++++ P++ + VV IS+C+ G
Sbjct: 289 MIRGLAVH----------------GFGQEAIEFYNRLVSQGLVPDDATFVVTISACSHSG 332
Query: 924 ALSQGLWA-HSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRM-LERDTYCYNAM 1097
+ +GL HS G++ L+ + GRL+ A + +M ++ + + +
Sbjct: 333 LVDEGLQIFHSMKEVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPMKPNATLWRSF 392
Query: 1098 IRGLAVHG 1121
+ HG
Sbjct: 393 LGSAQTHG 400
>ref|XP_002863633.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297309468|gb|EFH39892.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 460
Score = 274 bits (701), Expect = 4e-71
Identities = 150/318 (47%), Positives = 196/318 (61%), Gaps = 4/318 (1%)
Frame = +3
Query: 192 MNTLSPKSAHPIFKLIEQCKKISTLKQVHAQMITTGLILHTYPLXXXXXXXXXXXXXXXX 371
M + S H LI +CK + LKQ+HAQ+IT GL HTYPL
Sbjct: 1 MTSPSTSKNHRCLNLIPKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYAL 60
Query: 372 XXXXFNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTT--LIPNSYTYPSL 545
Q+ NP++FL+NTLISS ++ Q+H A +LY +IL + + PN +TYPSL
Sbjct: 61 SI--LRQIPNPSVFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSL 118
Query: 546 FKACSSQP-WLQHGRALHTHILKFLEPP-YDHFVQASLLNFYSKCRKLGVSRCLFDQITK 719
FKA + W +HGRALH H+LKF+EP +D FVQA+L+ FY+ C +L +R L ++I +
Sbjct: 119 FKASGFETKWHRHGRALHAHVLKFIEPVNHDRFVQAALVGFYANCGELREARSLLERIRE 178
Query: 720 PDLASWNSILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPNEVSVVVL 899
PDLA+WN++L AYA++ E + E L LF +MQ RPNE+S+V L
Sbjct: 179 PDLATWNTLLAAYANSEETESDE-------------EVLKLFVRMQ---VRPNELSLVAL 222
Query: 900 ISSCADLGALSQGLWAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRMLERDT 1079
I SCA+LG G+WAH Y+L L LN+FVGT+LI Y+ CG L FARQVFD M ERD
Sbjct: 223 IKSCANLGEFWGGVWAHVYLLKKNLTLNQFVGTSLIDFYSKCGCLSFARQVFDEMSERDI 282
Query: 1080 YCYNAMIRGLAVHGLGLE 1133
C+NAMIRGLAVHG G E
Sbjct: 283 SCFNAMIRGLAVHGFGQE 300
Score = 70.5 bits (171), Expect = 1e-09
Identities = 54/246 (21%), Positives = 115/246 (46%), Gaps = 2/246 (0%)
Frame = +3
Query: 390 QVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTTLIPNSYTYPSLFKACSSQP 569
++ P + +NTL+++ ++ + L L+ R+ ++ PN + +L K+C++
Sbjct: 175 RIREPDLATWNTLLAAYANSEETESDEEVLKLFVRMQVR----PNELSLVALIKSCANLG 230
Query: 570 WLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLASWNSIL 749
G H ++LK + FV SL++FYSKC L +R +FD++++ D++ +N+++
Sbjct: 231 EFWGGVWAHVYLLK-KNLTLNQFVGTSLIDFYSKCGCLSFARQVFDEMSERDISCFNAMI 289
Query: 750 TAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPNEVSVVVLISSCADLGAL 929
A + E + L++ + P+ + VV IS+C+ G +
Sbjct: 290 RGLAVH----------------GFGQEGIELYNSLISQGLVPDNATFVVTISACSHSGLV 333
Query: 930 SQGLWA-HSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRM-LERDTYCYNAMIR 1103
+GL HS G++ L+ + GRL+ A + +M ++ + + + +
Sbjct: 334 DEGLQIFHSMKTVYGIEPKVEHYGCLVDLLGRSGRLEEAEECIKKMPMKPNATLWRSFLG 393
Query: 1104 GLAVHG 1121
+HG
Sbjct: 394 SAQIHG 399
>ref|XP_006664303.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
chloroplastic-like [Oryza brachyantha]
Length = 599
Score = 177 bits (449), Expect = 7e-42
Identities = 110/296 (37%), Positives = 163/296 (55%), Gaps = 10/296 (3%)
Frame = +3
Query: 270 QVHAQMITTGLILHTYPLXXXXXXXXXXXXXXXXXXXXFNQVTNPTIFLFNTLISSSLAR 449
Q+HA ++T GL H+ L PT FL N+L+++S R
Sbjct: 36 QLHALLLTAGLAHHSPNLSLLLRLASPALSVSHRLHLLLCSPLPPTTFLANSLLAASSPR 95
Query: 450 KKDDQSHFALALYTRILMQTT------LIPNSYTYPSLFKACSSQPWLQHGRALHTHILK 611
+L+LY+ + + +T L PN++TYP LF+A AL TH +K
Sbjct: 96 CFPS----SLSLYSLLFLSSTMPPPPLLRPNAFTYPLLFRAAPPAVAF----ALATHSVK 147
Query: 612 FL---EPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLASWNSILTAYAHNTSVEY 782
FL YD F+ A+LL+ +++C ++ R +FD+I +PDL +WN++L+AYA S
Sbjct: 148 FLGTHAASYDRFLGAALLDVFARCGRIASCRRVFDRIARPDLPAWNALLSAYARCAS--- 204
Query: 783 EASPDNAYDSTNLSLEALFLFSQMQKSLT-RPNEVSVVVLISSCADLGALSQGLWAHSYV 959
+A D+ L LF++M T RPNE+++V +I +C +LGAL G+WAH+Y+
Sbjct: 205 -----SAADTI------LELFARMLSLATIRPNEITLVAVIGACGELGALGHGIWAHTYL 253
Query: 960 LSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRMLERDTYCYNAMIRGLAVHGLG 1127
+ L +N + TAL+ MYA CGRLD A VF +RDT CYNAM++GLA HG G
Sbjct: 254 VKRQLAINCIMTTALVEMYARCGRLDLAEHVFATTSDRDTRCYNAMLQGLAAHGHG 309
Score = 72.8 bits (177), Expect = 2e-10
Identities = 60/251 (23%), Positives = 116/251 (46%), Gaps = 5/251 (1%)
Frame = +3
Query: 384 FNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTTLIPNSYTYPSLFKACSS 563
F+++ P + +N L+S+ AR + L L+ R+L T+ PN T ++ AC
Sbjct: 181 FDRIARPDLPAWNALLSA-YARCASSAADTILELFARMLSLATIRPNEITLVAVIGACGE 239
Query: 564 QPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLASWNS 743
L HG HT+++K + + + +L+ Y++C +L ++ +F + D +N+
Sbjct: 240 LGALGHGIWAHTYLVK-RQLAINCIMTTALVEMYARCGRLDLAEHVFATTSDRDTRCYNA 298
Query: 744 IL---TAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPNEVSVVVLISSCA 914
+L A+ H + AL LF +M+ S + V+V+ ++ SCA
Sbjct: 299 MLQGLAAHGHGRA-------------------ALALFDRMRGSGMLVDGVTVLSVLCSCA 339
Query: 915 DLGALSQGL-WAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRM-LERDTYCY 1088
G + +GL + + G++ ++ M + GRLD A ++ M + + Y
Sbjct: 340 HAGLVDEGLEYFDKMEIEFGIEPRIEHYGCVVDMLSRAGRLDDAEKLIHEMPIAPNAAIY 399
Query: 1089 NAMIRGLAVHG 1121
++IR +HG
Sbjct: 400 RSLIRACGIHG 410
>gb|ABA96368.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 605
Score = 174 bits (442), Expect = 5e-41
Identities = 107/292 (36%), Positives = 156/292 (53%), Gaps = 6/292 (2%)
Frame = +3
Query: 270 QVHAQMITTGLILHTYPLXXXXXXXXXXXXXXXXXXXXFNQVTNPTIFLFNTLISSSLAR 449
Q+HA ++T GL H+ + PT FL N+L+ LA
Sbjct: 38 QLHALVLTAGLARHSPNFSLLLRLASPLLPVSHRLRLLLSSPLPPTTFLANSLL---LAS 94
Query: 450 KKDDQSHFALALYTRILMQTT---LIPNSYTYPSLFKACSSQPWLQHGRALHTHILKFL- 617
AL+LY + + ++ L PN++TYP LF+A L AL TH +KFL
Sbjct: 95 SSSRCLPSALSLYALLFLSSSPPLLRPNAFTYPPLFRAAPPALAL----ALATHSVKFLG 150
Query: 618 --EPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLASWNSILTAYAHNTSVEYEAS 791
D + A+LL +++C ++ R +FD+I PDL +WN++L+AYA + + +
Sbjct: 151 AHAASCDRVLGAALLGVFARCGRIASCRRVFDRIAHPDLPAWNALLSAYARLRARDVACA 210
Query: 792 PDNAYDSTNLSLEALFLFSQMQKSLTRPNEVSVVVLISSCADLGALSQGLWAHSYVLSNG 971
T+ + L LF +M PNE+++V +I +C +LGA+S G+WAH+Y +
Sbjct: 211 -------TSAADAILELFVRMLSLAIEPNEITLVAVIGACGELGAVSHGVWAHTYAVKRR 263
Query: 972 LKLNRFVGTALIAMYANCGRLDFARQVFDRMLERDTYCYNAMIRGLAVHGLG 1127
L +N V TAL+ MYA CGRLD A QVF +RDT CYNAM+ GLAVHG G
Sbjct: 264 LAVNCIVATALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHG 315
>gb|EMS58725.1| hypothetical protein TRIUR3_04390 [Triticum urartu]
Length = 618
Score = 173 bits (438), Expect = 1e-40
Identities = 109/294 (37%), Positives = 163/294 (55%), Gaps = 9/294 (3%)
Frame = +3
Query: 273 VHAQMITTGLILHT--YPLXXXXXXXXXXXXXXXXXXXXFNQVTNPTIFLFNTLISSSLA 446
+HA ++T+GL LH+ + L + + PT FL N+L+ + L
Sbjct: 59 LHALLLTSGLALHSPNFALLLRLASSSVPSVSHRLQLLLCSPLP-PTAFLANSLLLAHLP 117
Query: 447 RKKDDQSHFALALYTRILMQTT--LIPNSYTYPSLFKACSSQPWLQHGRALHTHILKFL- 617
AL LY+ + + + L PN +TYP+L +A + L AL TH LKFL
Sbjct: 118 S--------ALPLYSLLFLASPPLLRPNEFTYPALLRASPPRTAL----ALATHSLKFLG 165
Query: 618 --EPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLASWNSILTAYAHNTSVEYEAS 791
D + A+LL+ +++C ++ R +FD+I +PDL +WN++LTAYA
Sbjct: 166 AGAASRDRVLGAALLDAFARCGRIASCRRVFDRIVQPDLPAWNALLTAYARR-------- 217
Query: 792 PDNAYDST--NLSLEALFLFSQMQKSLTRPNEVSVVVLISSCADLGALSQGLWAHSYVLS 965
A DS+ + E L LF++M S PNE+++V +IS+C +LGAL GLWAH+Y L
Sbjct: 218 ---ARDSSCAGEAAEILELFARMVSSTVTPNEITLVAVISACGELGALGHGLWAHAYALR 274
Query: 966 NGLKLNRFVGTALIAMYANCGRLDFARQVFDRMLERDTYCYNAMIRGLAVHGLG 1127
+ L +N ++ TAL+ MY CG +D A QVF + + DT CYNAM++GLA HG G
Sbjct: 275 HRLTVNCYLATALVEMYTRCGEMDLAEQVFAGVTDMDTRCYNAMLQGLAFHGRG 328
Score = 62.8 bits (151), Expect = 3e-07
Identities = 51/252 (20%), Positives = 112/252 (44%), Gaps = 6/252 (2%)
Frame = +3
Query: 384 FNQVTNPTIFLFNTLISSSLARKKDD----QSHFALALYTRILMQTTLIPNSYTYPSLFK 551
F+++ P + +N L+++ R +D ++ L L+ R ++ +T+ PN T ++
Sbjct: 196 FDRIVQPDLPAWNALLTAYARRARDSSCAGEAAEILELFAR-MVSSTVTPNEITLVAVIS 254
Query: 552 ACSSQPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLA 731
AC L HG H + L+ + ++ +L+ Y++C ++ ++ +F +T D
Sbjct: 255 ACGELGALGHGLWAHAYALRH-RLTVNCYLATALVEMYTRCGEMDLAEQVFAGVTDMDTR 313
Query: 732 SWNSILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPNEVSVVVLISSC 911
+N++L A + AL LF +M + V+++ ++ +C
Sbjct: 314 CYNAMLQGLAFH----------------GRGRAALTLFDRMCAEGFPVDSVTMLAVMCAC 357
Query: 912 ADLGALSQGLWAHSYV-LSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRM-LERDTYC 1085
A G + +G W + + G+ ++ + G+LD A ++ M + +
Sbjct: 358 AHAGLVDEGQWLFDRMEIQFGVTPRIEHYGCMVDILGRAGQLDVAEKLIRGMDIPPNAAM 417
Query: 1086 YNAMIRGLAVHG 1121
Y ++IR +HG
Sbjct: 418 YRSLIRACGIHG 429
>gb|ABA91346.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica Group]
Length = 624
Score = 172 bits (437), Expect = 2e-40
Identities = 106/293 (36%), Positives = 157/293 (53%), Gaps = 7/293 (2%)
Frame = +3
Query: 270 QVHAQMITTGLILHTYPLXXXXXXXXXXXXXXXXXXXXFNQVTNPTIFLFNTLISSSLAR 449
Q+H ++T GL H+ + PT FL N+ + LA
Sbjct: 56 QLHGLLLTAGLARHSPNFSLLLRLASPLLPVPHRLRLLLSSPLPPTTFLANSFL---LAS 112
Query: 450 KKDDQSHFALALYTRILMQTT----LIPNSYTYPSLFKACSSQPWLQHGRALHTHILKFL 617
AL+LY + + ++ L PN++TYP LF+A L AL TH +KFL
Sbjct: 113 SSPGCLPSALSLYALLFLSSSSPPLLRPNAFTYPPLFRAAPPALAL----ALATHSIKFL 168
Query: 618 ---EPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLASWNSILTAYAHNTSVEYEA 788
D + A+LL+ +++C ++ R +FD+I PDL +WN++L+AYA + + A
Sbjct: 169 GAHAASCDRVLGAALLDVFARCGRIASCRKVFDRIANPDLPAWNALLSAYARLRARDV-A 227
Query: 789 SPDNAYDSTNLSLEALFLFSQMQKSLTRPNEVSVVVLISSCADLGALSQGLWAHSYVLSN 968
+A D+ L +F +M +PNE+++V +I +C +LGA+S G+WAH+Y +
Sbjct: 228 CASSAADAI------LEMFVRMLSLAIKPNEITLVAVIGACGELGAVSHGVWAHTYAVKR 281
Query: 969 GLKLNRFVGTALIAMYANCGRLDFARQVFDRMLERDTYCYNAMIRGLAVHGLG 1127
L +N V TAL+ MYA CGRLD A QVF +RDT CYNAM+ GLAVHG G
Sbjct: 282 RLAVNCIVATALVEMYAGCGRLDLAEQVFAAASDRDTRCYNAMLHGLAVHGHG 334
>gb|EMJ15830.1| hypothetical protein PRUPE_ppa002950mg [Prunus persica]
Length = 619
Score = 170 bits (431), Expect = 9e-40
Identities = 106/319 (33%), Positives = 162/319 (50%)
Frame = +3
Query: 177 LRAHHMNTLSPKSAHPIFKLIEQCKKISTLKQVHAQMITTGLILHTYPLXXXXXXXXXXX 356
L H+ N SP + + L++ C LKQ+H QM+ + + L
Sbjct: 24 LNPHNPNQ-SPSLSQKLLYLLKHCVSTKELKQIHTQMLINSIHKPNFLLPKIVDLKDFSY 82
Query: 357 XXXXXXXXXFNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTTLIPNSYTY 536
F+ + P + FN +I Q L Y + + L+PN++TY
Sbjct: 83 ASML-----FSHIPEPNDYAFNIMIRGLTTTWHKYQ--LTLEFYYQ-MKSLCLMPNNFTY 134
Query: 537 PSLFKACSSQPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFDQIT 716
P +F AC++ L HGRA H+ + K D V SL+ Y++C KLG +R +FD+I
Sbjct: 135 PFVFIACANLVELNHGRAAHSSVFK-TGLDKDGHVTHSLITMYARCGKLGFARKVFDEIC 193
Query: 717 KPDLASWNSILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPNEVSVVV 896
+ DL SWNS+++ Y+ + EA+ LF +M+ + P+E+S+V
Sbjct: 194 QRDLVSWNSMISGYS----------------KMGYAGEAVRLFQEMRDAEFEPDEMSLVS 237
Query: 897 LISSCADLGALSQGLWAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFDRMLERD 1076
++ +C DLG LS G W S+V+ N L+LN +VG+ALI MY CG L AR+VFD M ++D
Sbjct: 238 ILGACGDLGDLSLGRWVESFVVENKLELNSYVGSALIGMYGKCGDLSSARRVFDSMKKKD 297
Query: 1077 TYCYNAMIRGLAVHGLGLE 1133
+NAMI G A +G+ E
Sbjct: 298 RVTWNAMITGYAQNGMSDE 316
Score = 117 bits (294), Expect = 7e-24
Identities = 66/201 (32%), Positives = 110/201 (54%)
Frame = +3
Query: 519 PNSYTYPSLFKACSSQPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRC 698
P+ + S+ AC L GR + + +++ + + +V ++L+ Y KC L +R
Sbjct: 230 PDEMSLVSILGACGDLGDLSLGRWVESFVVEN-KLELNSYVGSALIGMYGKCGDLSSARR 288
Query: 699 LFDQITKPDLASWNSILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPN 878
+FD + K D +WN+++T YA N +S EA+ LF M++ P+
Sbjct: 289 VFDSMKKKDRVTWNAMITGYAQN----------------GMSDEAMVLFDDMKERGVNPD 332
Query: 879 EVSVVVLISSCADLGALSQGLWAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFD 1058
++++V ++S+CA +GAL G W Y G++ + +VGTALI MYA CG L A +VF+
Sbjct: 333 KITLVGMLSACASVGALDLGRWIDIYASERGIQQDIYVGTALIDMYAKCGSLANALRVFE 392
Query: 1059 RMLERDTYCYNAMIRGLAVHG 1121
M +++ +NAMI LA HG
Sbjct: 393 DMPQKNEVSWNAMISALAFHG 413
>ref|XP_002272744.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like
[Vitis vinifera]
Length = 622
Score = 169 bits (428), Expect = 2e-39
Identities = 107/327 (32%), Positives = 166/327 (50%), Gaps = 17/327 (5%)
Frame = +3
Query: 204 SPKSAHPIFKLIEQCKKISTLKQVHAQMITTGLILHTYPLXXXXXXXXXXXXXXXXXXXX 383
S +A L+++C + L+Q+H QM+ TGLIL P
Sbjct: 14 SESNAAQTLHLLQRCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYART 73
Query: 384 -FNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTTLIP-NSYTYPSLFKAC 557
F+++ P F++NT+I K+ ++ AL LY +L + +P N+YT+P L KAC
Sbjct: 74 VFDRIFRPNTFMWNTMIRGYSNSKEPEE---ALLLYHHMLYHS--VPHNAYTFPFLLKAC 128
Query: 558 SSQPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLASW 737
SS L+ + +H HI+K + + + SLLN YSK + +R LFDQ+ + D SW
Sbjct: 129 SSMSALEETQQIHAHIIK-MGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSW 187
Query: 738 NSILTAYAHNTSVEYEASPDNAYDSTNL---------------SLEALFLFSQMQKSLTR 872
NS++ Y +E N N+ EAL LF +MQ + +
Sbjct: 188 NSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIK 247
Query: 873 PNEVSVVVLISSCADLGALSQGLWAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQV 1052
+ V++V + +CADLG L QG W H+Y+ + ++++ +G LI MYA CG L+ A +V
Sbjct: 248 LDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEV 307
Query: 1053 FDRMLERDTYCYNAMIRGLAVHGLGLE 1133
F +M E+ + AMI G A+HG G E
Sbjct: 308 FRKMEEKGVSVWTAMISGYAIHGRGRE 334
>ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed
protein product [Vitis vinifera]
Length = 618
Score = 168 bits (425), Expect = 4e-39
Identities = 104/327 (31%), Positives = 171/327 (52%), Gaps = 5/327 (1%)
Frame = +3
Query: 168 LAKLRAHHMNTLSPKSAHPIFKLIEQCKKISTLKQVHAQMITTGL-----ILHTYPLXXX 332
LAK + H TL+ K + L++QC +L+Q+H QMI + +LH +
Sbjct: 19 LAKSQRHAQQTLTDK----LLSLLKQCTSTKSLQQIHTQMIINAIHKPNFLLHRF----- 69
Query: 333 XXXXXXXXXXXXXXXXXFNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTT 512
F+Q+ P + FN +I + + + + Y + +
Sbjct: 70 -----IDLKDFNNASLLFSQIPYPNEYAFNIMIRGLTTTWQ--KFNLTIEFYYQ-MKDFG 121
Query: 513 LIPNSYTYPSLFKACSSQPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVS 692
+ PN++TYP +F AC++ L HG+ H+ +LK H V+ SL+ YS+C +LG +
Sbjct: 122 IRPNNFTYPFVFIACANLLVLNHGQCAHSGVLKSGLCADGH-VRHSLITMYSRCGELGCA 180
Query: 693 RCLFDQITKPDLASWNSILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTR 872
R +FD+I++ DL SWNS+++ Y+ + +A+ LF +M+ +
Sbjct: 181 RRVFDEISEKDLVSWNSMISGYSR----------------MGYAGDAVGLFGEMRDAGFE 224
Query: 873 PNEVSVVVLISSCADLGALSQGLWAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQV 1052
P+E+++V ++ +C DLG L G W +V+ N + LN FVG+ALI MY CG L AR+V
Sbjct: 225 PDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGMYGKCGDLSSARRV 284
Query: 1053 FDRMLERDTYCYNAMIRGLAVHGLGLE 1133
FDRM+++D +NAMI G A +G+ E
Sbjct: 285 FDRMVKKDVVTWNAMITGYAQNGVSDE 311
Score = 125 bits (313), Expect = 4e-26
Identities = 71/201 (35%), Positives = 113/201 (56%)
Frame = +3
Query: 519 PNSYTYPSLFKACSSQPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRC 698
P+ T S+ AC L G + +++ E + FV ++L+ Y KC L +R
Sbjct: 225 PDEMTLVSILGACGDLGDLGLGSWIEGFVVEN-EMDLNSFVGSALIGMYGKCGDLSSARR 283
Query: 699 LFDQITKPDLASWNSILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKSLTRPN 878
+FD++ K D+ +WN+++T YA N +S EA+ LFS M++S P+
Sbjct: 284 VFDRMVKKDVVTWNAMITGYAQN----------------GVSDEAIILFSGMRESGVNPD 327
Query: 879 EVSVVVLISSCADLGALSQGLWAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFD 1058
++++V ++S+CA +GAL G W +Y GL+ + +V TALI MYA CG LD A +VF+
Sbjct: 328 KITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYAKCGSLDDALRVFE 387
Query: 1059 RMLERDTYCYNAMIRGLAVHG 1121
M +++ +NAMI LA HG
Sbjct: 388 DMPQKNEVSWNAMISALAFHG 408
Score = 58.5 bits (140), Expect = 5e-06
Identities = 51/233 (21%), Positives = 108/233 (46%), Gaps = 3/233 (1%)
Frame = +3
Query: 384 FNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTTLIPNSYTYPSLFKACSS 563
F+++ + +N +I+ D+ A+ L++ + ++ + P+ T + AC+S
Sbjct: 285 FDRMVKKDVVTWNAMITGYAQNGVSDE---AIILFSG-MRESGVNPDKITLVGVLSACAS 340
Query: 564 QPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLASWNS 743
L G+ L T+ + D +V +L++ Y+KC L + +F+ + + + SWN+
Sbjct: 341 IGALDFGKWLDTYASE-RGLQNDIYVSTALIDMYAKCGSLDDALRVFEDMPQKNEVSWNA 399
Query: 744 ILTAYAHNTSVEYEASPDNAYDSTNLSLEALFLFSQMQKS--LTRPNEVSVVVLISSCAD 917
+++A A + P E+L LF +M K RPN++S + ++S+C
Sbjct: 400 MISALA------FHGRPQ----------ESLSLFKRMSKEGGAVRPNDISFIGVLSACVH 443
Query: 918 LGALSQGLWAHSYVLSN-GLKLNRFVGTALIAMYANCGRLDFARQVFDRMLER 1073
G + +G + S+ GL + ++ + A G + A ++M E+
Sbjct: 444 AGLVDEGRQLFDLMSSSFGLVPKIEHHSCMVDLLARAGHVHEAWDFIEKMPEK 496
>gb|EOX91580.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 633
Score = 167 bits (424), Expect = 6e-39
Identities = 105/325 (32%), Positives = 172/325 (52%), Gaps = 16/325 (4%)
Frame = +3
Query: 207 PKSAHPIFKLIEQCKKISTLKQVHAQMITTGLILHTYP-LXXXXXXXXXXXXXXXXXXXX 383
P S + L+++ I L Q+HA ++ GL H +P L
Sbjct: 32 PPSPDKLALLLDKSNSIHHLLQIHATLLRRGL--HDHPILNFKLQRSYSSLGRLDYSLAL 89
Query: 384 FNQVTNPTIFLFNTLISSSLARKKDDQSHFALALYTRILMQTTLIPNSYTYPSLFKACSS 563
FN+ NP IF + ++I+ A S AL +YTR+L + PN +T+ S+ K+CS
Sbjct: 90 FNRTLNPNIFFYTSIIN---AHALHGLSQEALFIYTRMLFEGVQ-PNEFTFSSILKSCS- 144
Query: 564 QPWLQHGRALHTHILKFLEPPYDHFVQASLLNFYSKCRKLGVSRCLFDQITKPDLASWNS 743
+HG+ LH+ +KF D +V+ L++ Y++ +G +R +F+++ + L S+ +
Sbjct: 145 ---FEHGKMLHSQAIKFGFDS-DLYVKTGLVDVYARGGDIGSARLVFERMLEKSLVSFTT 200
Query: 744 ILTAYAHNTSVEYE-------ASPD--------NAYDSTNLSLEALFLFSQMQKSLTRPN 878
+LT YA + +E D + Y + EAL LF +M + RPN
Sbjct: 201 MLTCYAKHGELEEARLLFDGMVKKDVVCWNVMIDGYAQHGMPNEALVLFRRMLAAKARPN 260
Query: 879 EVSVVVLISSCADLGALSQGLWAHSYVLSNGLKLNRFVGTALIAMYANCGRLDFARQVFD 1058
E++++ ++S+CA LGAL G W H+Y+ +N +++N V TALI MY+ CG L+ AR VFD
Sbjct: 261 EITILAVLSACAQLGALESGRWLHTYIDNNNIQVNVRVATALIDMYSKCGSLEDARLVFD 320
Query: 1059 RMLERDTYCYNAMIRGLAVHGLGLE 1133
R+ ++D +N+MI G A+HG E
Sbjct: 321 RIPDKDVVAWNSMIIGYALHGFSQE 345
Score = 78.6 bits (192), Expect = 4e-12
Identities = 59/219 (26%), Positives = 106/219 (48%), Gaps = 3/219 (1%)
Frame = +3
Query: 474 ALALYTRILMQTTLIPNSYTYPSLFKACSSQPWLQHGRALHTHILKFLEPPYDHFVQASL 653
AL L+ R+L PN T ++ AC+ L+ GR LHT+I + V +L
Sbjct: 245 ALVLFRRMLAAKAR-PNEITILAVLSACAQLGALESGRWLHTYIDNN-NIQVNVRVATAL 302
Query: 654 LNFYSKCRKLGVSRCLFDQITKPDLASWNSILTAYAHNTSVEYEASPDNAYDSTNLSLEA 833
++ YSKC L +R +FD+I D+ +WNS++ YA + S EA
Sbjct: 303 IDMYSKCGSLEDARLVFDRIPDKDVVAWNSMIIGYALH----------------GFSQEA 346
Query: 834 LFLFSQMQKSLTRPNEVSVVVLISSCADLGALSQGLWAHSYVLSN--GLKLNRFVGTALI 1007
L LF M ++ RP +++ + ++ +C G +++G W+ Y + + G++ ++
Sbjct: 347 LELFHGMCRTRLRPTDITFIGVLGACGHAGLVNEG-WSLFYAMKDEYGIEPKIEHYGCMV 405
Query: 1008 AMYANCGRLDFARQVFDRM-LERDTYCYNAMIRGLAVHG 1121
+ GRL+ A ++ M +E D + A++ +HG
Sbjct: 406 NLLGRAGRLEEAYELAKNMKIEPDPILWGALLGACRLHG 444