BLASTX nr result

ID: Atropa21_contig00027190 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00027190
         (582 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605...    73   5e-11
ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579...    67   3e-09
ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein A...    60   5e-07
ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein A...    58   2e-06

>ref|XP_006354689.1| PREDICTED: uncharacterized protein LOC102605437 [Solanum tuberosum]
          Length = 333

 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 36/91 (39%), Positives = 56/91 (61%)
 Frame = -1

Query: 582 METDALTMQKVLDGIWEVPWSISIEIATIHHWRRNGHINISHVLREENAIADFFY*HGFR 403
           +ETD+  + K+L  IWEVPWSI + I  I    +  H+ I HV RE N +AD+     F 
Sbjct: 233 LETDSQVLIKILTRIWEVPWSIVVIIEDIWGLFQECHVQIQHVYREGNTLADYLANLAFF 292

Query: 402 FCSIV*FTSFQGLPATAQRLINVDKSQILNL 310
             +I+ + SF  LP+ A++++N+DK Q+ N+
Sbjct: 293 NPNIIVYNSFAELPSQAKKIVNLDKQQLPNI 323


>ref|XP_006338863.1| PREDICTED: uncharacterized protein LOC102579795 [Solanum tuberosum]
          Length = 778

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 28/54 (51%), Positives = 39/54 (72%)
 Frame = -1

Query: 582 METDALTMQKVLDGIWEVPWSISIEIATIHHWRRNGHINISHVLREENAIADFF 421
           +ETD+L + K+LDGIWE PWSIS+ I  I   RR+G + +SHV RE N + ++F
Sbjct: 205 LETDSLIVSKILDGIWETPWSISLLIKKIQWLRRDGQVEVSHVFREGNKVVNYF 258


>ref|XP_006356603.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 885

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 29/91 (31%), Positives = 51/91 (56%)
 Frame = -1

Query: 582  METDALTMQKVLDGIWEVPWSISIEIATIHHWRRNGHINISHVLREENAIADFFY*HGFR 403
            +ETD+L+++K++   W VPW I+ ++  I          I+H+ RE N++AD        
Sbjct: 774  IETDSLSLKKIIQQTWRVPWKIAEKVEEIREIMEKIKAKITHIFREGNSLADSLANIAIE 833

Query: 402  FCSIV*FTSFQGLPATAQRLINVDKSQILNL 310
              +   ++ FQ LP   +R++N+DK+QI  L
Sbjct: 834  SQAEHQYSCFQELPLKERRILNIDKAQIPTL 864


>ref|XP_006367640.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
            tuberosum]
          Length = 1035

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/92 (31%), Positives = 49/92 (53%)
 Frame = -1

Query: 582  METDALTMQKVLDGIWEVPWSISIEIATIHHWRRNGHINISHVLREENAIADFFY*HGFR 403
            +ETD+L +Q ++   W++PW +  ++  IH   +   + + HV RE N +ADF       
Sbjct: 745  LETDSLALQNMITRSWKIPWELVEKLEEIHEIMQQIDVQVCHVYREVNQLADFIANTTIN 804

Query: 402  FCSIV*FTSFQGLPATAQRLINVDKSQILNLM 307
                  F  F  LP+  ++L+N+DK Q L L+
Sbjct: 805  TEHKKVFHHFHQLPSLGKKLLNIDKHQELLLL 836


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