BLASTX nr result
ID: Atropa21_contig00027187
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00027187
(1404 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 297 8e-81
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 293 2e-76
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 288 4e-75
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 286 1e-74
ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663... 260 2e-68
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 263 2e-67
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661... 257 7e-66
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 219 2e-54
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 206 2e-50
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana] 195 6e-50
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 194 1e-46
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 194 1e-46
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 188 5e-45
dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like ... 184 6e-44
gb|AAC95175.1| putative non-LTR retroelement reverse transcripta... 183 1e-43
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal... 182 3e-43
gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thal... 180 1e-42
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 179 2e-42
emb|CAB72467.1| putative protein [Arabidopsis thaliana] 179 3e-42
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc... 176 3e-41
>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1114
Score = 297 bits (761), Expect(2) = 8e-81
Identities = 161/366 (43%), Positives = 225/366 (61%), Gaps = 5/366 (1%)
Frame = -2
Query: 1400 FSAQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLL 1221
F AQK L QGDPLSP++F + M+ L++ + DP+FN HPKC ++ + FA DLL+
Sbjct: 638 FDAQKGLRQGDPLSPFLFALSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLM 697
Query: 1220 FCRGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPF 1041
F R D +SI K+ F FSKASGL +I S IYFGGV + + D+++ G+LPF
Sbjct: 698 FARADASSISKIMAAFNSFSKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPF 757
Query: 1040 RYLSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIF 861
RYL VPL++K+L+ QC L+DK+ R + LSY G L LVKT+L+S+Q +W QIF
Sbjct: 758 RYLGVPLASKKLNFSQCKPLIDKITTRAQGWVAHLLSYAGRLQLVKTILYSMQNYWGQIF 817
Query: 860 ILPKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCK 681
LPKK++KAVET CR FLWTG TS K + W L PK GGLN+ + N A+ K
Sbjct: 818 PLPKKLIKAVETTCRKFLWTGTVDTSYKAPVAWDFLQQPKSTGGLNVTNMVLWNKAAILK 877
Query: 680 PLWNLCRK*DKLWVKWVHVYYVKNQSVWE-CFPKQAS*MLRKIFK----VVQTFGEDRLD 516
LW + K DKLWV+WV+ YY+K Q++ S +LRKIF+ + +T G + +
Sbjct: 878 LLWAITFKQDKLWVRWVNAYYIKRQNIENVTVSSNTSWILRKIFESRELLTRTGGWEAVS 937
Query: 515 DKQVKAVEVFSIRQVYL*LRGTYQKVSWRRLTCNNHGSPKWIFILYLALNKRLYTRDILK 336
+ FSI++ Y L+ Y+ V W+RL CNN +PK FIL+LA+ RL T + +
Sbjct: 938 NHM-----NFSIKKTYKLLQEDYENVVWKRLICNNKATPKSQFILWLAMLNRLATAERVS 992
Query: 335 KWEMNI 318
+W ++
Sbjct: 993 RWNRDV 998
Score = 32.0 bits (71), Expect(2) = 8e-81
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 312 VCPLCESENESVNHLFFKFSYSTLVW 235
+C +C +E E++ HLFF YS +W
Sbjct: 1001 LCKMCGNEIETIQHLFFNCIYSKEIW 1026
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 293 bits (749), Expect = 2e-76
Identities = 157/462 (33%), Positives = 258/462 (55%), Gaps = 4/462 (0%)
Frame = -2
Query: 1394 AQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLLFC 1215
A++ + QGDP+SP +F++ M+ LN++ L P+FN+H KC K+ I FA DLLLF
Sbjct: 465 ARRGIRQGDPISPLLFILVMEYLNRILSQLDKIPNFNYHSKCEKMKITNLCFADDLLLFS 524
Query: 1214 RGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPFRY 1035
RGD S+ + D F F ++ GL N +IY G VD ++ +L F +G +PFRY
Sbjct: 525 RGDIGSVQIMLDKFNTFLRSMGLHVNPSKCNIYCGSVDINVKEQLLLISGFKEGKMPFRY 584
Query: 1034 LSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIFIL 855
L +PLS+K+L+ +L+DK++GR+T ++ LSY G + L+++V+F+ FW Q L
Sbjct: 585 LGIPLSSKKLNIKHYQVLIDKIVGRITHWSAGLLSYAGRVQLIQSVIFATINFWMQCLPL 644
Query: 854 PKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCKPL 675
PK V+ + ICR+FLW G++ S+K I W+++C PK+ GGLNI++ N ++ K L
Sbjct: 645 PKFVIMRINAICRSFLWIGNSNISRKSPIAWEKVCSPKINGGLNIINLAIWNKISILKLL 704
Query: 674 WNLCRK*DKLWVKWVHVYYVKNQSVWECFPKQA-S*MLRKIFKVVQTFGEDRLDDKQVKA 498
WN+C K D LW+KW+H YY++ QS+W K++ S ++ + K+ L Q +
Sbjct: 705 WNVCNKSDNLWIKWLHTYYIRGQSIWSMVLKKSHSWIMSSMMKL-----RPLLLQYQSRM 759
Query: 497 VEVFSIRQVYL*LRGTYQKVSWRRLTCNNHGSPKWIFILYLALNKRLYTRDILKKWEMNI 318
+VF ++++YL L +K+SWR L CNN P+ +F L+ A + RL ++D L K+ +N+
Sbjct: 760 QDVFKMKKIYLALFEESEKMSWRTLMCNNLARPRALFCLWQACHFRLASKDRLIKFGLNV 819
Query: 317 KWYAPCVNLKMNQXXXXXXXXXXXX*YGKLLGWMGYRRCSMEWTR*VEWMIAQVNGKAAQ 138
+ + + +L W+ W+ + W+ + GK +
Sbjct: 820 DANCAFCSSMESHEHLFFGCIELKTIWTAVLNWLQIIHMPSTWSEELNWITRKCKGKGWR 879
Query: 137 SQVCRTVAARCVYFLMQERNNRVF---QKNQMVPGVLIRQII 21
+ + + +Y + RN+RVF N+ V +I II
Sbjct: 880 AMLLKCAFTETIYHIWAYRNHRVFGGNVNNRKVEDSIINTII 921
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 288 bits (737), Expect = 4e-75
Identities = 168/466 (36%), Positives = 254/466 (54%), Gaps = 6/466 (1%)
Frame = -2
Query: 1400 FSAQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLL 1221
F A+K L QGDP+SP++F +CM+ L++ + L PDFN HPKC +LNI FA DLL+
Sbjct: 635 FQARKGLRQGDPMSPFLFALCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLM 694
Query: 1220 FCRGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPF 1041
FCR D++S+ + F KFS ASGL + S+IYF GVD T + + D + G LPF
Sbjct: 695 FCRADKSSLDHMNVAFQKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPF 754
Query: 1040 RYLSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIF 861
RYL VPL++K+L+ QC L++ + R +K LSY G L L+K++L S+Q +W IF
Sbjct: 755 RYLGVPLTSKKLTYAQCKPLVEMITNRAQTWMAKLLSYAGRLQLIKSILSSMQNYWAHIF 814
Query: 860 ILPKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCK 681
L KKV++AVE +CR FLWTG +KK + W + PK GG N+++ + N A+ K
Sbjct: 815 PLSKKVIQAVEKVCRKFLWTGKTEETKKAPVAWATIQRPKSRGGWNVINMKYWNRAAMLK 874
Query: 680 PLWNLCRK*DKLWVKWVHVYYVKNQSVWEC-FPKQAS*MLRKIFKVVQTFGEDRL----D 516
LW + K DKLWV+W+H YY+K Q + Q + +LRKI K D L D
Sbjct: 875 LLWAIEFKRDKLWVRWIHSYYIKRQDILTVNISNQTTWILRKIVK-----ARDHLSNIGD 929
Query: 515 DKQVKAVEVFSIRQVYL*LRGTYQKVSWRRLTCNNHGSPKWIFILYLALNKRLYTRDILK 336
++ + FS+++ Y + ++V WRRL CNN+ +PK FIL++ L++RL T D +
Sbjct: 930 WDEICIGDKFSMKKAYKKISENGERVRWRRLICNNYATPKSKFILWMMLHERLPTVDRIS 989
Query: 335 KWEMNIKW-YAPCVNLKMNQXXXXXXXXXXXX*YGKLLGWMGYRRCSMEWTR*VEWMIAQ 159
+W + Y C N + K+ M + + + + Q
Sbjct: 990 RWGVQCDLNYRLCRNDGETIQHLFFSCSYSAGVWSKICYIMRFPNSGVSHQEIISSVCGQ 1049
Query: 158 VNGKAAQSQVCRTVAARCVYFLMQERNNRVFQKNQMVPGVLIRQII 21
K + ++ + VY + ++RN R F ++R+I+
Sbjct: 1050 ARKK--KGKLIVMLYTEFVYAIWKQRNKRTFTGENKDENEVLRKIL 1093
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 286 bits (733), Expect = 1e-74
Identities = 158/445 (35%), Positives = 246/445 (55%), Gaps = 2/445 (0%)
Frame = -2
Query: 1394 AQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLLFC 1215
A++ L QGDP+SP +FVI M+ LN+ + D DFN+HPKC KL I FA DLLLF
Sbjct: 23 ARRGLRQGDPISPMLFVIVMECLNRYLYKMQKDGDFNYHPKCDKLKITNLCFADDLLLFS 82
Query: 1214 RGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPFRY 1035
RGD+ S+ + + FSKA+GL+ N S+ G+D+VT++ +L+ F +G LPF+Y
Sbjct: 83 RGDKISVGMMMRAYESFSKATGLLVNPQKCSLLCAGIDAVTKREILEVSGFQEGQLPFKY 142
Query: 1034 LSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIFIL 855
L VP+++K+LS I L+DK++G++ T++ LSY G L LV +V+F++ +W F
Sbjct: 143 LGVPVTSKKLSTIHYSPLIDKIVGKIKHWTARLLSYAGRLQLVNSVMFALTNYWLNCFPF 202
Query: 854 PKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCKPL 675
PK VL+ +E ICR FLWTG S+K + WKQ+C P+ GGLNI+ N + K L
Sbjct: 203 PKSVLQKIEAICRIFLWTGGFEGSRKSPVAWKQICSPRSCGGLNIIDIDIWNKANLMKLL 262
Query: 674 WNLCRK*DKLWVKWVHVYYVKNQSVWECFPKQA-S*MLRKIFKVVQTFGE-DRLDDKQVK 501
WNL K D LWVKW+ YYVK + K S +++ I K + + D +++ ++
Sbjct: 263 WNLSSKEDSLWVKWIQAYYVKRSELMHIEMKNTDSWIMKAILKQREDLEKIDNMEELMIR 322
Query: 500 AVEVFSIRQVYL*LRGTYQKVSWRRLTCNNHGSPKWIFILYLALNKRLYTRDILKKWEMN 321
++ ++Y L+ Q+ W+ L N P+ FIL+LA + RL T+D L K+ M
Sbjct: 323 G--SINMGKLYRKLQDCGQRKEWKNLLYGNTARPRANFILWLACHGRLSTKDRLCKYGMI 380
Query: 320 IKWYAPCVNLKMNQXXXXXXXXXXXX*YGKLLGWMGYRRCSMEWTR*VEWMIAQVNGKAA 141
+ + + + ++L W+ R +W + W+ GK
Sbjct: 381 DDKSCCFCSEEESMNHLFFVCDNSKRVWMEVLQWVQIRHDPSDWPNELHWLTHHTKGKGT 440
Query: 140 QSQVCRTVAARCVYFLMQERNNRVF 66
++ V + A +Y + RNN++F
Sbjct: 441 RAAVLKMAIAETIYEIWNIRNNKIF 465
>ref|XP_006605183.1| PREDICTED: uncharacterized protein LOC102663533 [Glycine max]
Length = 514
Score = 260 bits (665), Expect(2) = 2e-68
Identities = 131/352 (37%), Positives = 208/352 (59%), Gaps = 1/352 (0%)
Frame = -2
Query: 1376 QGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLLFCRGDETS 1197
QGDP+SP +FV+ M+ N++ + +P FNHH +C +L I FA D+ L CRGD+ S
Sbjct: 132 QGDPISPLLFVLMMEYFNRIMVKMQRNPSFNHHSQCERLGITHLSFADDVFLLCRGDKKS 191
Query: 1196 IYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPFRYLSVPLS 1017
I + F FSK++GL N ++ GG++ + Q + F +G LP RYL VPLS
Sbjct: 192 IKMIIKAFSFFSKSTGLQINPAKCKVFCGGLNCDSIQVITKITGFEEGTLPVRYLGVPLS 251
Query: 1016 TKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIFILPKKVLK 837
K+L+ L L++K++G++ +SK LS G + LV++++ +I +W +F +PKKV++
Sbjct: 252 CKKLNVHHYLPLVEKIVGKIRHWSSKLLSIAGRIQLVRSIITAIAQYWMSVFPMPKKVIQ 311
Query: 836 AVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCKPLWNLCRK 657
+++ICR+F+W+G A +K L+ WKQ+C P GGLN+++ + N TA+ K LWN+C K
Sbjct: 312 KIDSICRSFIWSGSAEVKRKSLVAWKQVCKPARCGGLNLINLELWNVTAMLKCLWNICSK 371
Query: 656 *DKLWVKWVHVYYVKNQSVWECFPK-QAS*MLRKIFKVVQTFGEDRLDDKQVKAVEVFSI 480
D LWVKW+H Y++K +V K ++ +L+ + K +L ++ FS+
Sbjct: 372 EDNLWVKWIHAYFLKGDNVMSATIKSNSTWILKSVMKQRPQVNNLQLVWIEMLRKRKFSM 431
Query: 479 RQVYL*LRGTYQKVSWRRLTCNNHGSPKWIFILYLALNKRLYTRDILKKWEM 324
+QVY+ L + K+ W RL N P+ L+LA RL T+ LK M
Sbjct: 432 KQVYMELVEDHNKIDWFRLLRYNRARPRANVTLWLACQNRLATKTRLKNMNM 483
Score = 27.7 bits (60), Expect(2) = 2e-68
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -1
Query: 312 VCPLCESENESVNHLFFKFSYSTLVW 235
+C LC+ ++E ++HL F + +W
Sbjct: 488 LCSLCKEQDEDLDHLMFSCRVTKAIW 513
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 263 bits (671), Expect = 2e-67
Identities = 127/269 (47%), Positives = 179/269 (66%)
Frame = -2
Query: 1400 FSAQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLL 1221
F A K L QGDP+SP++F I M+ L+++ K L D F +HPK AKL++ FA DLLL
Sbjct: 443 FDAAKGLRQGDPMSPFLFAIAMEYLSRLLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLL 502
Query: 1220 FCRGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPF 1041
F RGD SI + F +FS+ASGL N+ SSIY GGV +Q ++ +L ++ LPF
Sbjct: 503 FSRGDLNSIKALQKCFTEFSQASGLQANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPF 562
Query: 1040 RYLSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIF 861
+YL VPLS+K+L+ IQ L++K+M R+ T+K LSY G LVKTVLF +Q W Q+F
Sbjct: 563 KYLGVPLSSKKLNTIQWYPLIEKVMARINSWTAKKLSYAGRAQLVKTVLFGVQALWAQLF 622
Query: 860 ILPKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCK 681
I+P K++K +E +CR++LW+G +KK LI W ++C PK GGL +++ + N +AV K
Sbjct: 623 IIPAKIIKLIEGLCRSYLWSGVGYVTKKALIAWDKVCSPKYEGGLGLINLKIWNRSAVTK 682
Query: 680 PLWNLCRK*DKLWVKWVHVYYVKNQSVWE 594
W+L K DKLW+KW+H YY+K Q W+
Sbjct: 683 LCWDLANKEDKLWIKWIHAYYIKGQREWK 711
>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
Length = 947
Score = 257 bits (657), Expect = 7e-66
Identities = 146/455 (32%), Positives = 234/455 (51%), Gaps = 8/455 (1%)
Frame = -2
Query: 1397 SAQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLLF 1218
+A++ + QGDP+SP +FV+ M+ LN++ L D +FNHH KC KL I FA D+LLF
Sbjct: 464 AAKRGIRQGDPISPLLFVVMMEYLNRLLVKLQLDLNFNHHAKCEKLGITHLTFADDVLLF 523
Query: 1217 CRGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPFR 1038
CRGD S+ + KFS +GL+ N IYFGGVD T+ + + +G LP R
Sbjct: 524 CRGDVMSVEMMLHVINKFSATTGLVVNPNKCRIYFGGVDGTTKNKIQQISSYEEGQLPVR 583
Query: 1037 YLSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIFI 858
YL VPL++K+L+ L L+DK+ R+ TSK L+ G + +V + +I FW Q
Sbjct: 584 YLGVPLTSKKLNIKYYLPLIDKITTRIRHWTSKLLNMTGRVQMVNCTITAIVQFWMQCLP 643
Query: 857 LPKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCKP 678
+P V+K ++++CR+F+W+ ++K I W +C PK GGLNI + + N V
Sbjct: 644 IPMSVIKKIDSMCRSFVWSRSTEITRKSPIAWNSVCRPKGQGGLNIFNLKVWNHITVLNC 703
Query: 677 LWNLCRK*DKLWVKWVHVYYVKNQSVWECF-PKQAS*MLRKIFK------VVQTFGEDRL 519
LWNLC+K D LWVKW+H +Y+KN SV S +L+ + +Q ++ L
Sbjct: 704 LWNLCKKVDNLWVKWIHAHYIKNSSVMNTMVTNNFSWVLKNVLSQREYIHTLQPVWDELL 763
Query: 518 DDKQVKAVEVFSIRQVYL*LRGTYQKVSWRRLTCNNHGSPKWIFILYLALNKRLYTRDIL 339
+ ++ K + + +V W L N P+ I +LA + RL T+D L
Sbjct: 764 NSERFKMKKAYDKMM-------EADRVHWSGLMRKNCARPRAIHTTWLACHGRLGTKDRL 816
Query: 338 KKWEM-NIKWYAPCVNLKMNQXXXXXXXXXXXX*YGKLLGWMGYRRCSMEWTR*VEWMIA 162
++ M K ++ C ++ Q + +L +G EW ++W++
Sbjct: 817 VRFGMITDKIWSLCKEVEETQNHILFSCKVATDIWSNVLNRIGIDHVPQEWPLELDWLLN 876
Query: 161 QVNGKAAQSQVCRTVAARCVYFLMQERNNRVFQKN 57
N K ++ + + +Y + RN+++F N
Sbjct: 877 LTNRKGWRAYLLKLSVTETIYGIWINRNSKIFGDN 911
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 219 bits (558), Expect = 2e-54
Identities = 141/469 (30%), Positives = 220/469 (46%), Gaps = 6/469 (1%)
Frame = -2
Query: 1400 FSAQKCLGQGDPLSPYMFVICMKKLNK-VFKLLGSDPDFNHHPKCAKLNII*PGFAYDLL 1224
F+ ++ L QGDPLSPY+FVI M+ L+ + + + P F +H +C +LN+ FA DLL
Sbjct: 471 FARRRGLRQGDPLSPYLFVIAMEVLSLCIQRRINCSPCFRYHWRCDQLNLSHLCFADDLL 530
Query: 1223 LFCRGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALP 1044
+FC GDE S+ + D F F S L N+ S I+ GVD + +VL FS G P
Sbjct: 531 MFCNGDENSVRTLHDAFSNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCP 590
Query: 1043 FRYLSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQI 864
RYL +PL T +L C LLD++ R+ +K LS+ G L L+++VL SIQ +W
Sbjct: 591 VRYLGIPLITSKLRMQDCSPLLDRIETRIKSWENKVLSFAGRLQLIQSVLSSIQVYWASH 650
Query: 863 FILPKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVC 684
ILPKKVLK +E R FLW G+ + + W ++CLPK GGL I N +
Sbjct: 651 LILPKKVLKDIEKRLRCFLWAGNCSGRAATKVAWSEICLPKCEGGLGIKDLHCWNKALMI 710
Query: 683 KPLWNLCRK*DKLWVKWVHVYYVKNQSVWEC-FPKQAS*MLRKIFKVVQ---TFGEDRLD 516
+WNL W WV VY +K S W P S RK+ K+ + +F + +
Sbjct: 711 SHIWNLVSSSSNFWTDWVKVYLLKGNSFWNAPLPSICSWNWRKLLKIRELCCSFFVNIIG 770
Query: 515 DKQVKAVEVFSIRQV-YL*LRGTYQKVSWRRLTCNNHGSPKWIFILYLALNKRLYTRDIL 339
D + ++ + + L LR + + L+ + +P + A N +R I
Sbjct: 771 DGRATSLWFDNWHPLGPLTLRWSSNIIGESGLSKSAMLTPNGFYSTSSAWNTLRPSRFI- 829
Query: 338 KKWEMNIKWYAPCVNLKMNQXXXXXXXXXXXX*YGKLLGWMGYRRCSMEWTR*VEWMIAQ 159
+ WY + + +L + + W+ + W+
Sbjct: 830 ------VPWYRLVWFVAETHNHLFFDCAYSFGIWTHVLSKCDVSKPLLPWSDFIFWVATN 883
Query: 158 VNGKAAQSQVCRTVAARCVYFLMQERNNRVFQKNQMVPGVLIRQIIQEM 12
G + + + VY + +ERNNR F+ + P V+ + I++ +
Sbjct: 884 WKGNSLPVVILKLALQAVVYAIWRERNNRRFRNESLPPAVVFKGIVESI 932
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 1223
Score = 206 bits (524), Expect = 2e-50
Identities = 105/269 (39%), Positives = 154/269 (57%)
Frame = -2
Query: 1400 FSAQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLL 1221
F + + L QG LSPY+FVICM L+K+ + F +HPKC + + FA DL++
Sbjct: 650 FQSSRGLRQGCALSPYLFVICMDVLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMV 709
Query: 1220 FCRGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPF 1041
G SI ++ F +F+K SGL ++ S++Y G+ + + V D+ FS G LP
Sbjct: 710 LSDGKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPV 769
Query: 1040 RYLSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIF 861
RYL +PL TKRLS CL LL+++ R+ TS+ LSY G L+L+ +VL+SI FW F
Sbjct: 770 RYLGLPLITKRLSTTDCLPLLEQVRKRIGSWTSRFLSYAGRLNLISSVLWSICNFWLAAF 829
Query: 860 ILPKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCK 681
LP+K ++ +E +C FLW+G S K I+W +C PK GGL + + N K
Sbjct: 830 RLPRKCIRELEKMCSAFLWSGTEMNSNKAKISWHMVCKPKDEGGLGLRSLKEANDVCCLK 889
Query: 680 PLWNLCRK*DKLWVKWVHVYYVKNQSVWE 594
+W + + LWVKWV + ++N S WE
Sbjct: 890 LVWKIVSHSNSLWVKWVDQHLLRNASFWE 918
>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
Length = 653
Score = 195 bits (496), Expect(2) = 6e-50
Identities = 113/361 (31%), Positives = 183/361 (50%)
Frame = -2
Query: 1400 FSAQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLL 1221
F +++ L QG LSPY+FV+ M L+K+ S F +H +C +L++ FA DL++
Sbjct: 177 FQSKRGLRQGCSLSPYLFVMSMDVLSKLLDQAASAKKFGYHSRCKELSLTHLSFADDLMV 236
Query: 1220 FCRGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPF 1041
G SI + + F F+K SGL ++ S+IY GV + ++ +F G LP
Sbjct: 237 LSDGKVRSIDGIVEVFDIFAKFSGLKISMEKSTIYLAGVTEDVYHEIQNRYQFDVGQLPV 296
Query: 1040 RYLSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIF 861
RYL +PL TKRL+A LL+ + ++ T++ LSY G L+L+ +VL+SI FW F
Sbjct: 297 RYLGLPLVTKRLTATDYSPLLEHIKKKIGTWTTRYLSYAGRLNLITSVLWSICNFWLAAF 356
Query: 860 ILPKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCK 681
LP++ ++ ++ IC FLW+G +K + W +C PK GGL + + N + K
Sbjct: 357 RLPRECIREIDKICSAFLWSGPDLNPRKTRVCWGDVCKPKQEGGLGLRSLKEMNEVSCLK 416
Query: 680 PLWNLCRK*DKLWVKWVHVYYVKNQSVWECFPKQAS*MLRKIFKVVQTFGEDRLDDKQVK 501
+W + + LWV+W+ Y +K+ + W ++ + R D+ K
Sbjct: 417 LIWRIVSHTNSLWVRWIEQYLLKHDTFWS---------VQTTTNMDSVLWRGRNDEYMPK 467
Query: 500 AVEVFSIRQVYL*LRGTYQKVSWRRLTCNNHGSPKWIFILYLALNKRLYTRDILKKWEMN 321
FS R + R T V+W H +PK+ F +LA+ RL T D + +W
Sbjct: 468 ----FSTRDTWNQTRNTSTPVTWHMGIWFAHATPKFSFCAWLAVQNRLSTGDKMLQWNRR 523
Query: 320 I 318
+
Sbjct: 524 L 524
Score = 30.8 bits (68), Expect(2) = 6e-50
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -1
Query: 309 CPLCESENESVNHLFFKFSYSTLVWK 232
C LC + E+ NHLFF Y+ +W+
Sbjct: 528 CVLCNNNIETRNHLFFSCCYTAEIWE 553
>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
Length = 872
Score = 194 bits (492), Expect = 1e-46
Identities = 101/287 (35%), Positives = 159/287 (55%), Gaps = 2/287 (0%)
Frame = -2
Query: 1400 FSAQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLL 1221
F +++ L QG LSPY+FVICM L+K+ F HPKC +L + FA DL++
Sbjct: 297 FQSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFADDLMV 356
Query: 1220 FCRGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPF 1041
G SI + + F +F K SGL ++ S++Y GV + +Q + K F G LP
Sbjct: 357 LSDGKTRSIEGILEVFDEFCKRSGLRISLEKSTLYMAGVSPIIKQEIAAKFLFDVGQLPV 416
Query: 1040 RYLSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIF 861
RYL +PL TKRL++ LL+++ R+ T + S+ G +L+K+VL+SI FW F
Sbjct: 417 RYLGLPLVTKRLTSADYSPLLEQIKKRIATWTFRFFSFAGRFNLIKSVLWSICNFWLAAF 476
Query: 860 ILPKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCK 681
LP++ ++ ++ +C +FLW+G +S K I+W +C PK GGL + + + N + K
Sbjct: 477 RLPRQCIREIDKLCSSFLWSGSEMSSHKAKISWDIVCKPKAEGGLGLRNLKEANDVSCLK 536
Query: 680 PLWNLCRK*DKLWVKWVHVYYVKNQSVWEC--FPKQAS*MLRKIFKV 546
+W + + LW KWV Y ++ +S+W S + RKI K+
Sbjct: 537 LVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQSTSMGSWIWRKILKI 583
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 194 bits (492), Expect = 1e-46
Identities = 102/286 (35%), Positives = 156/286 (54%), Gaps = 2/286 (0%)
Frame = -2
Query: 1400 FSAQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLL 1221
F +++ L QG LSPY+FVICM L+ + + + +HPKC KL++ FA DL++
Sbjct: 223 FGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMV 282
Query: 1220 FCRGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPF 1041
F G + S+ V + F +F+ SGL ++ S++Y GV + + +L F+ G LP
Sbjct: 283 FIDGQQRSVEGVINIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPV 342
Query: 1040 RYLSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIF 861
RYL +PL TK+++ LLDK+ +++ T++SLSY G L L+ +V+ S+ FW +
Sbjct: 343 RYLGLPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAY 402
Query: 860 ILPKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCK 681
LP +K +E +C FLW+G KK ITW LC K GGL I N + K
Sbjct: 403 RLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLK 462
Query: 680 PLWNLCRK*DKLWVKWVHVYYVKNQSVWECFPKQA--S*MLRKIFK 549
+W L + LWV WV Y ++ S W + + S M +K+ K
Sbjct: 463 LIWRLVSRQSSLWVNWVWTYIIRKGSFWSANDRSSLGSWMWKKLLK 508
>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1277
Score = 188 bits (477), Expect = 5e-45
Identities = 97/268 (36%), Positives = 145/268 (54%)
Frame = -2
Query: 1400 FSAQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLL 1221
F +++ L QG LSPY+FVICM L+ + + + +HPKC KL++ FA DL++
Sbjct: 792 FGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMV 851
Query: 1220 FCRGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPF 1041
F G + S+ V + F F+ SGL ++ S++Y V + + +L F+ G LP
Sbjct: 852 FIDGQQRSVEGVINIFKDFAGKSGLHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPV 911
Query: 1040 RYLSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIF 861
RYL PL TK+++ LLDK+ +++ T++SLSY G L L+ +V+ S+ FW +
Sbjct: 912 RYLGFPLLTKQMTTADYSPLLDKVRSKISSWTARSLSYAGRLALINSVIVSLSNFWMSAY 971
Query: 860 ILPKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCK 681
LP +K +E +C FLW+G KK ITW LC K GGL I N + K
Sbjct: 972 RLPAGCIKEIEKLCSAFLWSGPELNPKKAKITWTSLCKLKQEGGLGIKSLLEANKVSCLK 1031
Query: 680 PLWNLCRK*DKLWVKWVHVYYVKNQSVW 597
+W L + LWV WV Y ++ S W
Sbjct: 1032 LIWRLVSRQSSLWVNWVWTYIIRKGSFW 1059
>dbj|BAB08270.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
thaliana]
Length = 489
Score = 184 bits (468), Expect = 6e-44
Identities = 92/268 (34%), Positives = 150/268 (55%)
Frame = -2
Query: 1400 FSAQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLL 1221
F++ + L QG LSPY+FV+ M L+K+ F +HP+C ++ + FA DL++
Sbjct: 32 FNSTRGLRQGCSLSPYLFVVSMNVLSKLLDKATGQRRFGYHPRCKQMGLTHLSFADDLMV 91
Query: 1220 FCRGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPF 1041
G SI + + F F+K SGL ++ S++YF G+ + Q V+ F+ G LP
Sbjct: 92 LSDGKVRSIEGIVEVFETFAKCSGLRISMEKSTVYFAGLSHTSPQEVMAHFPFAVGTLPV 151
Query: 1040 RYLSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIF 861
RYL +PL TK+LS+ L L++ + ++ +++ LSY G L+L+ +VL+SI FW F
Sbjct: 152 RYLGLPLVTKQLSSTDYLPLIEHIKKKIGSWSARFLSYAGRLNLISSVLWSICNFWMGAF 211
Query: 860 ILPKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCK 681
LP++ ++ ++ +C +LW+G + K I W +C PK GGL + + N + K
Sbjct: 212 RLPRECIREIDKMCSAYLWSGGDLNTSKAKIAWTDVCKPKDEGGLGLRSLKEANDVSCLK 271
Query: 680 PLWNLCRK*DKLWVKWVHVYYVKNQSVW 597
+W + D LWVKW+H +K S W
Sbjct: 272 LIWRIISHADSLWVKWIHATLLKQVSFW 299
>gb|AAC95175.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1352
Score = 183 bits (465), Expect = 1e-43
Identities = 92/268 (34%), Positives = 151/268 (56%)
Frame = -2
Query: 1400 FSAQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLL 1221
F +++ L QG LSPY++VICM L+ + + ++HP+C +N+ FA D+++
Sbjct: 797 FRSERGLRQGCSLSPYLYVICMNVLSCMLDKAAVEKKISYHPRCRNMNLTHLCFADDIMV 856
Query: 1220 FCRGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPF 1041
F G SI F KF+ S L ++ S+I+ G+ + ++L + F G LP
Sbjct: 857 FSDGTSKSIQGTLAIFEKFAAMSWLKISLEKSTIFMAGISPNAKTSILQQFPFELGTLPV 916
Query: 1040 RYLSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIF 861
+YL +PL TKR++ L L++K+ R+T T++ LS+ G L L+K+VL SI FW +F
Sbjct: 917 KYLGLPLLTKRMTQSDYLPLVEKIRARITSWTNRFLSFAGRLQLIKSVLSSITNFWLSVF 976
Query: 860 ILPKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCK 681
LPK L+ +E + FLW+G +KK I W ++C K GGL + + N ++ K
Sbjct: 977 RLPKACLQEIEKMFSAFLWSGPDLNTKKAKIAWSEVCKLKEEGGLGLKPLKEANEVSLLK 1036
Query: 680 PLWNLCRK*DKLWVKWVHVYYVKNQSVW 597
+W + D LWVKWV+ + ++ ++ W
Sbjct: 1037 LIWRILSARDSLWVKWVNKHLIRKETFW 1064
>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
gi|7267919|emb|CAB78261.1| putative reverse transcriptase
[Arabidopsis thaliana]
Length = 662
Score = 182 bits (462), Expect = 3e-43
Identities = 98/289 (33%), Positives = 156/289 (53%), Gaps = 1/289 (0%)
Frame = -2
Query: 1400 FSAQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLL 1221
F++ + L QG L+PY+FVI M L+K F +HPKC L + FA D+++
Sbjct: 168 FNSLRGLRQGCSLTPYLFVIVMDVLSKKLDRAAGLRKFGYHPKCKNLGLTHLSFADDIMV 227
Query: 1220 FCRGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPF 1041
G S+ + + F F+K SGL ++ ++IYF G+ + D+ F+ G LP
Sbjct: 228 LTDGKLRSLEGIVEVFDSFAKQSGLKISMAKTTIYFAGISKSVCKEFEDQFHFAVGRLPV 287
Query: 1040 RYLSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIF 861
RYL +PL TKR ++ LL+++ R+ T++ LSY G L+LV +VL+SI FW F
Sbjct: 288 RYLCLPLVTKRFTSQDYSPLLEQIKRRIGTWTARFLSYAGRLNLVSSVLWSICNFWLSAF 347
Query: 860 ILPKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCK 681
LP++ ++ ++ +C FLW+G ++ K I W+ +C PK GGL + + N K
Sbjct: 348 RLPRECVREIDKLCSAFLWSGPELSTNKAKIAWETVCRPKREGGLGLQSIKEANDVCCLK 407
Query: 680 PLWNLCRK*DKLWVKWVHVYYVKNQSVWEC-FPKQAS*MLRKIFKVVQT 537
+W + + D LWV+W+ Y +K + W Q S M +K+ K T
Sbjct: 408 LIWRIVSQGDSLWVQWIRTYLLKRNTFWSFRSASQGSWMWKKLLKYRDT 456
>gb|AAG50886.1|AC025294_24 hypothetical protein [Arabidopsis thaliana]
Length = 629
Score = 180 bits (456), Expect = 1e-42
Identities = 99/290 (34%), Positives = 151/290 (52%), Gaps = 2/290 (0%)
Frame = -2
Query: 1400 FSAQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLL 1221
F + + + QG LSPY+FVI M+ L+K+ F HPKC L + FA DL++
Sbjct: 55 FRSARGIRQGCALSPYLFVISMEVLSKMLDQAAGGKRFGFHPKCKNLGLTHLCFADDLMI 114
Query: 1220 FCRGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPF 1041
G S+ + + F+K SGL N+ +++Y GV + ++ + F G LP
Sbjct: 115 LTDGKVRSVDGIVEVMNLFAKRSGLQINMEKTTLYTAGVSDHNRYMMISRYPFGLGQLPV 174
Query: 1040 RYLSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIF 861
RYL +PL TKRL+ L +++ R+ TS+ LS+ G L+L+ +VL+S FW F
Sbjct: 175 RYLGLPLVTKRLTKEDLSPLFEQIRNRIGTWTSRYLSFAGRLNLISSVLWSTMNFWMSAF 234
Query: 860 ILPKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCK 681
LP LK + +IC FLW+G +K ++W +C PK GGL + N +V K
Sbjct: 235 RLPSACLKEINSICSAFLWSGPELHRRKAKVSWDDICKPKQEGGLGLRSLTEANVVSVLK 294
Query: 680 PLWNLCRK*DKLWVKWVHVYYVKNQSVWECFPKQA--S*MLRKIFKVVQT 537
+W + D LWVKW + +K +S W P + S M +K+ K +T
Sbjct: 295 LIWRVTSNDDSLWVKWSKMNLLKQESFWSLTPNSSLGSWMWKKMLKYRET 344
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 179 bits (455), Expect = 2e-42
Identities = 96/286 (33%), Positives = 150/286 (52%), Gaps = 2/286 (0%)
Frame = -2
Query: 1400 FSAQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLL 1221
F + + L QG LSPY+FVICM L+ + + +HPKC K+ + FA DL++
Sbjct: 947 FGSSRGLRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMV 1006
Query: 1220 FCRGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPF 1041
F G + SI V + F +F+ SGL ++ S+IY GV + + L F+ G LP
Sbjct: 1007 FVDGHQWSIEGVINVFKEFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPV 1066
Query: 1040 RYLSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIF 861
RYL +PL TK+++ L++ + +++ T++SLSY G L L+ +V+ SI FW +
Sbjct: 1067 RYLGLPLLTKQMTTADYSPLIEAVKTKISSWTARSLSYAGRLALLNSVIVSIANFWMSAY 1126
Query: 860 ILPKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCK 681
LP ++ +E +C FLW+G KK I W +C PK GGL I N + K
Sbjct: 1127 RLPAGCIREIEKLCSAFLWSGPVLNPKKAKIAWSSICQPKKEGGLGIKSLAEANKVSCLK 1186
Query: 680 PLWNLCRK*DKLWVKWVHVYYVKNQSVWECFPKQA--S*MLRKIFK 549
+W L LWV W+ + ++ + W + + S M +K+ K
Sbjct: 1187 LIWRLLSTQPSLWVTWIWTFIIRKGTFWSANERSSLGSWMWKKLLK 1232
>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
Length = 762
Score = 179 bits (453), Expect = 3e-42
Identities = 93/268 (34%), Positives = 147/268 (54%)
Frame = -2
Query: 1400 FSAQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLL 1221
F + + L QG LSPY+FVICM L+K+ + +HP C ++ + FA DL++
Sbjct: 203 FQSSRGLRQGCALSPYLFVICMDVLSKLLDKVVGIGRIGYHPHCKRMGLTHLSFADDLMI 262
Query: 1220 FCRGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPF 1041
G SI + + F FSK SGL ++ S+I+ G+ S ++ + F G LP
Sbjct: 263 LTDGQCRSIEGIIEVFDLFSKWSGLKISMEKSTIFSAGLSSTSRAQLHTHFPFEVGELPI 322
Query: 1040 RYLSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIF 861
RYL +PL TKRLS++ L++++ R+ +S+ LS+ G +L+ ++++S FW F
Sbjct: 323 RYLGLPLVTKRLSSVDYAPLIEQIRKRIGSWSSRFLSFAGRFNLISSIIWSSCNFWLSAF 382
Query: 860 ILPKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCK 681
LP+ ++ +E +C +FLW+G SKK I+W Q+C PK GGL + + N K
Sbjct: 383 QLPRACIQEIEKLCSSFLWSGTNLNSKKAKISWNQVCKPKSEGGLGLRSLKEANDVCCLK 442
Query: 680 PLWNLCRK*DKLWVKWVHVYYVKNQSVW 597
+W + D LWVKWV +K + W
Sbjct: 443 LVWRIISHGDSLWVKWVEHNLLKREIFW 470
>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
Length = 1214
Score = 176 bits (445), Expect = 3e-41
Identities = 95/268 (35%), Positives = 142/268 (52%)
Frame = -2
Query: 1400 FSAQKCLGQGDPLSPYMFVICMKKLNKVFKLLGSDPDFNHHPKCAKLNII*PGFAYDLLL 1221
F K L QGDPLSP +FVI M+ L+++ + SD +HPK +++ I FA DL++
Sbjct: 643 FKGSKGLRQGDPLSPSLFVIAMEILSRLLENKFSDGSIGYHPKASEVRISSLAFADDLMI 702
Query: 1220 FCRGDETSIYKVFDGFPKFSKASGLIENIGNSSIYFGGVDSVTQQAVLDKLKFSKGALPF 1041
F G +S+ + F SGL N S++Y G++ ++ L F G PF
Sbjct: 703 FYDGKASSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLEDTDKEDTL-AFGFVNGTFPF 761
Query: 1040 RYLSVPLSTKRLSAIQCLLLLDKMMGRVTQ*TSKSLSYVG*LHLVKTVLFSIQTFWTQIF 861
RYL +PL ++L L+DK+ R +K+LS+ G L L+ +V++S FW F
Sbjct: 762 RYLGLPLLHRKLRRSDYSQLIDKIAARFNHWATKTLSFAGRLQLISSVIYSTVNFWLSSF 821
Query: 860 ILPKKVLKAVETICRTFLWTGDATTSKKPLITWKQLCLPKVAGGLNILHAQT*N*TAVCK 681
ILPK LK +E +C FLW D T ++W+ CLPK GGL + + T N T +
Sbjct: 822 ILPKCCLKTIEQMCNRFLWGNDITRRGDIKVSWQNSCLPKAEGGLGLRNFWTWNKTLNLR 881
Query: 680 PLWNLCRK*DKLWVKWVHVYYVKNQSVW 597
+W L + D LWV W H +++ + W
Sbjct: 882 LIWMLFARRDSLWVAWNHANRLRHVNFW 909