BLASTX nr result

ID: Atropa21_contig00027053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00027053
         (857 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004228683.1| PREDICTED: probable rRNA-processing protein ...    80   9e-13
ref|XP_006354174.1| PREDICTED: probable rRNA-processing protein ...    77   6e-12
ref|XP_004228684.1| PREDICTED: probable rRNA-processing protein ...    75   3e-11
ref|XP_006354166.1| PREDICTED: probable rRNA-processing protein ...    74   9e-11

>ref|XP_004228683.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Solanum
           lycopersicum]
          Length = 297

 Score = 80.1 bits (196), Expect = 9e-13
 Identities = 40/55 (72%), Positives = 42/55 (76%)
 Frame = -2

Query: 169 MMVENELAMMNPENEDFDPXXXXXXXXXXEAQQIVKLAEPSKTAVYNKDGLLERL 5
           MMV NELAMMNPENEDFDP            QQ+VKL+EPSKTAVYNKDGLLERL
Sbjct: 1   MMVANELAMMNPENEDFDPETESESEDEEGDQQVVKLSEPSKTAVYNKDGLLERL 55


>ref|XP_006354174.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Solanum
           tuberosum]
          Length = 297

 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 38/55 (69%), Positives = 42/55 (76%)
 Frame = -2

Query: 169 MMVENELAMMNPENEDFDPXXXXXXXXXXEAQQIVKLAEPSKTAVYNKDGLLERL 5
           MMV +E+AMMNPENEDFDP            QQ+VKLAEPSKTAVYN+DGLLERL
Sbjct: 1   MMVADEMAMMNPENEDFDPETESESEDEEGDQQVVKLAEPSKTAVYNRDGLLERL 55


>ref|XP_004228684.1| PREDICTED: probable rRNA-processing protein EBP2 homolog isoform 1
           [Solanum lycopersicum] gi|460365592|ref|XP_004228685.1|
           PREDICTED: probable rRNA-processing protein EBP2 homolog
           isoform 2 [Solanum lycopersicum]
          Length = 291

 Score = 75.1 bits (183), Expect = 3e-11
 Identities = 38/55 (69%), Positives = 41/55 (74%)
 Frame = -2

Query: 169 MMVENELAMMNPENEDFDPXXXXXXXXXXEAQQIVKLAEPSKTAVYNKDGLLERL 5
           MMV +ELAMMNPEN DFDP            QQ+VKLAEPSKTAVYN+DGLLERL
Sbjct: 1   MMVVDELAMMNPENGDFDPETESESEDEEGDQQVVKLAEPSKTAVYNRDGLLERL 55


>ref|XP_006354166.1| PREDICTED: probable rRNA-processing protein EBP2 homolog [Solanum
           tuberosum]
          Length = 299

 Score = 73.6 bits (179), Expect = 9e-11
 Identities = 37/55 (67%), Positives = 41/55 (74%)
 Frame = -2

Query: 169 MMVENELAMMNPENEDFDPXXXXXXXXXXEAQQIVKLAEPSKTAVYNKDGLLERL 5
           MMV +E+AMMN ENEDFDP            QQ+VKLAEPSKTAVYN+DGLLERL
Sbjct: 1   MMVADEIAMMNLENEDFDPETESESEDEEGDQQVVKLAEPSKTAVYNRDGLLERL 55


Top