BLASTX nr result

ID: Atropa21_contig00026935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00026935
         (945 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]    59   1e-15
ref|XP_006354421.1| PREDICTED: uncharacterized protein LOC102596...    74   1e-10
ref|XP_006340520.1| PREDICTED: uncharacterized protein LOC102599...    60   5e-10
ref|XP_006367854.1| PREDICTED: uncharacterized protein LOC102604...    69   3e-09
ref|XP_004242076.1| PREDICTED: uncharacterized protein LOC101251...    48   9e-09
ref|XP_004246814.1| PREDICTED: uncharacterized protein LOC101252...    48   2e-08
ref|XP_004248959.1| PREDICTED: uncharacterized protein LOC101266...    65   3e-08
gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]      64   1e-07
ref|XP_004229040.1| PREDICTED: uncharacterized protein LOC101252...    63   1e-07
gb|ADU56214.1| gag-pol polyprotein [Solanum lycopersicum]              61   5e-07
ref|XP_004253217.1| PREDICTED: uncharacterized protein LOC101263...    60   1e-06

>gb|ABI34339.1| Polyprotein, 3'-partial, putative [Solanum demissum]
          Length = 1475

 Score = 59.3 bits (142), Expect(2) = 1e-15
 Identities = 54/169 (31%), Positives = 72/169 (42%), Gaps = 4/169 (2%)
 Frame = +3

Query: 438 SLRVSKRDEFSKLXXXXXXXXXXXXXFHXXXXXXXXXXPIETEKIRYFMRGLYISLQLAI 617
           S+R   RD+F +L             FH          P E E++R F+RGL + L+L  
Sbjct: 227 SVRDRLRDQFCRLEQGSMSVAEYETRFHELSRHAEMILPTEEERVRCFVRGLRLQLRLET 286

Query: 618 L*LVAFRPYFQSMVNHARMVESLRGRLPRYESEKRAHRYGHYSGSTPKGNVQ*G----RX 785
             LV+    F  +V+HA  +E LR R  +  SEKRA   G YS S P+          R 
Sbjct: 287 QSLVSAGRSFLDVVDHASTMEHLR-REAQGGSEKRARHEGSYSDSRPRSRDYHDRVGRRF 345

Query: 786 XXXXXXXXVQLTLHISDGGSAGQSGYSVGHTSKGFCS*FLDHGGHSGSS 932
                    Q +L  SDGG  G++  S G   + F S    HG  S  S
Sbjct: 346 RQGQSSRPTQASLQASDGG-RGEASSSQGR--EVFQSGSSGHGSRSSGS 391



 Score = 51.2 bits (121), Expect(2) = 1e-15
 Identities = 28/82 (34%), Positives = 42/82 (51%)
 Frame = +1

Query: 187 FSNIKSSSFYGQPEEDTCEFIVSSH*RFYTLDIIELHRVNFIALQLMSYAKK*WRSYIDY 366
           F  +    F G   ED  EF+ + H R  TL ++E    +FIA QL   A++ WR++I  
Sbjct: 143 FLRLTPPRFSGAVGEDAHEFLTTCHERLRTLGLVESRGADFIAYQLDGPARQWWRTFIQT 202

Query: 367 RLASSPLLF*TRFYQVFLEKYV 432
           R   SP +    F + FL K++
Sbjct: 203 RPVGSPPVSWDEFSEAFLAKFI 224


>ref|XP_006354421.1| PREDICTED: uncharacterized protein LOC102596344 [Solanum tuberosum]
          Length = 464

 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 40/118 (33%), Positives = 64/118 (54%)
 Frame = +1

Query: 133 RTVTAAVMTCNEGKI*EHFSNIKSSSFYGQPEEDTCEFIVSSH*RFYTLDIIELHRVNFI 312
           R +  +VMT NE  +   F  +K   F+G   ED  EFI+  + R Y L I++ H V F+
Sbjct: 64  RPLFGSVMTGNEHDMLTKFLKLKPPVFHGSETEDAYEFILDCYKRLYKLGIVQQHGVEFV 123

Query: 313 ALQLMSYAKK*WRSYIDYRLASSPLLF*TRFYQVFLEKYVTSACE*ARGMSFLS*SRG 486
           + QL    K+ WR+Y++ R +  P L  T+F+ +FLEKY+       +   F++  +G
Sbjct: 124 SFQLQGKVKQWWRAYMECRSSILPPLTWTQFHALFLEKYLPRTLRDLKKDEFMALEQG 181


>ref|XP_006340520.1| PREDICTED: uncharacterized protein LOC102599426 [Solanum tuberosum]
          Length = 1228

 Score = 59.7 bits (143), Expect(2) = 5e-10
 Identities = 49/168 (29%), Positives = 65/168 (38%), Gaps = 3/168 (1%)
 Frame = +3

Query: 438 SLRVSKRDEFSKLXXXXXXXXXXXXXFHXXXXXXXXXXPIETEKIRYFMRGLYISLQLAI 617
           S R  KR EF  L             FH          P+E E++R F++GL I ++L +
Sbjct: 40  SERERKRAEFKGLQQDSMPVVEYEGRFHALARHSSMILPMEAERVRRFVKGLIIPIRLEV 99

Query: 618 L*LVAFRPYFQSMVNHARMVESLRGRLPRYESEKRAHRYGHYSGSTPKGNVQ*GRXXXXX 797
             +V     FQ                      KRA   G Y GS+PK     GR     
Sbjct: 100 SQVVVSGVPFQK------------------REGKRARHSGDYGGSSPKSRGYFGRGYHSQ 141

Query: 798 XXXXVQLTLHISDGGSAGQSGYSVGHTSKGFCS*FL---DHGGHSGSS 932
               + + +  S+ G AG S  S  HTS+G  S  +    H  HSGSS
Sbjct: 142 SSRLIHVAIPASEAGYAGHSSLSSVHTSQGSSSRPVGRRGHSDHSGSS 189



 Score = 31.6 bits (70), Expect(2) = 5e-10
 Identities = 17/33 (51%), Positives = 20/33 (60%)
 Frame = +1

Query: 334 AKK*WRSYIDYRLASSPLLF*TRFYQVFLEKYV 432
           AK+ WR YI  R A S  L  T+F  VFL K+V
Sbjct: 5   AKQWWRDYISSRPAGSSPLSGTQFTHVFLAKFV 37


>ref|XP_006367854.1| PREDICTED: uncharacterized protein LOC102604402 [Solanum tuberosum]
          Length = 553

 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 39/106 (36%), Positives = 56/106 (52%)
 Frame = +1

Query: 118 TKFWSRTVTAAVMTCNEGKI*EHFSNIKSSSFYGQPEEDTCEFIVSSH*RFYTLDIIELH 297
           T  + R +   VMT  E ++   F  +KS  F+G   ED  EFI+  + RF+ L I+  +
Sbjct: 40  TDAFFRPLLGPVMTGTEQEMLTKFLKLKSLVFHGFESEDAYEFILDCYERFHKLGIVHRY 99

Query: 298 RVNFIALQLMSYAKK*WRSYIDYRLASSPLLF*TRFYQVFLEKYVT 435
            V F+  QL    K+ WR+Y+  R    P L   +FY +FLEKY T
Sbjct: 100 GVEFVTFQLQGETKQWWRTYVKCRSPVFPPLTWMQFYVLFLEKYAT 145


>ref|XP_004242076.1| PREDICTED: uncharacterized protein LOC101251787 [Solanum
           lycopersicum]
          Length = 945

 Score = 48.1 bits (113), Expect(2) = 9e-09
 Identities = 34/109 (31%), Positives = 51/109 (46%)
 Frame = +3

Query: 438 SLRVSKRDEFSKLXXXXXXXXXXXXXFHXXXXXXXXXXPIETEKIRYFMRGLYISLQLAI 617
           S+R   RD+FS+L             FH          P E E++R F+RGL   L++  
Sbjct: 273 SVRDRLRDQFSRLEQVSMTVSEYEARFHELSRHATMILPTEGERVRCFVRGLRYRLRVDT 332

Query: 618 L*LVAFRPYFQSMVNHARMVESLRGRLPRYESEKRAHRYGHYSGSTPKG 764
             +V+    F  +V+HAR +E +     +  S+KRA   G YS S  +G
Sbjct: 333 EHMVSAGRSFIDVVDHARSMEHIHHE-AQGGSDKRARYQGSYSESQTRG 380



 Score = 38.9 bits (89), Expect(2) = 9e-09
 Identities = 26/107 (24%), Positives = 48/107 (44%)
 Frame = +1

Query: 112 PSTKFWSRTVTAAVMTCNEGKI*EHFSNIKSSSFYGQPEEDTCEFIVSSH*RFYTLDIIE 291
           P   F S  +    M   + KI   F  +    F G   ED  EF ++   +  +L ++E
Sbjct: 164 PVHVFASPILEVREMPLRDQKILGVFQRLAPPIFLGAIGEDAHEFKLTCQEQLQSLGLLE 223

Query: 292 LHRVNFIALQLMSYAKK*WRSYIDYRLASSPLLF*TRFYQVFLEKYV 432
               +F A Q     ++ WR++ + R   SP++  + F + FL +++
Sbjct: 224 SRGADFTAHQFRRPGRQWWRTHRESRPVGSPIISWSEFSEAFLAQFM 270


>ref|XP_004246814.1| PREDICTED: uncharacterized protein LOC101252518 [Solanum
           lycopersicum]
          Length = 588

 Score = 48.1 bits (113), Expect(2) = 2e-08
 Identities = 43/166 (25%), Positives = 62/166 (37%)
 Frame = +3

Query: 438 SLRVSKRDEFSKLXXXXXXXXXXXXXFHXXXXXXXXXXPIETEKIRYFMRGLYISLQLAI 617
           S R  KR EF  L             FH          P E E++R F++GL I ++L  
Sbjct: 94  SERERKRTEFEGLQQGSMSVAEYEGKFHALARHASMILPTEAERVRRFVKGLIIPIRLGF 153

Query: 618 L*LVAFRPYFQSMVNHARMVESLRGRLPRYESEKRAHRYGHYSGSTPKGNVQ*GRXXXXX 797
             + A    FQ +V+ A+ +    G + R            + G+ P      GR     
Sbjct: 154 SQVAASGVPFQKVVDAAKEL----GMIQR-----------DFCGAPPSSRGYVGRGYHSQ 198

Query: 798 XXXXVQLTLHISDGGSAGQSGYSVGHTSKGFCS*FLDHGGHSGSSV 935
               +   +  S+ G    S  S  HTS+G  S  +  GGH G  V
Sbjct: 199 SSKPIHAAIPASEAGYTRHSSSSSVHTSQGSSSTPMVRGGHYGPDV 244



 Score = 38.1 bits (87), Expect(2) = 2e-08
 Identities = 21/52 (40%), Positives = 28/52 (53%)
 Frame = +1

Query: 277 LDIIELHRVNFIALQLMSYAKK*WRSYIDYRLASSPLLF*TRFYQVFLEKYV 432
           LD   L  +  +  Q+   AK+ WR YI  R A S  L  T+F QVFL K++
Sbjct: 40  LDWWSLMELTILLFQMTGSAKQWWRDYISSRPAGSSPLSWTQFTQVFLSKFI 91


>ref|XP_004248959.1| PREDICTED: uncharacterized protein LOC101266468 [Solanum
           lycopersicum]
          Length = 927

 Score = 65.5 bits (158), Expect = 3e-08
 Identities = 50/154 (32%), Positives = 71/154 (46%), Gaps = 4/154 (2%)
 Frame = +3

Query: 438 SLRVSKRDEFSKLXXXXXXXXXXXXXFHXXXXXXXXXXPIETEKIRYFMRGLYISLQLAI 617
           S+R   RD+FS+L             FH          P E E+IR F+RGL   L++  
Sbjct: 266 SVRDRLRDQFSRLEQGSMTVSEYEAMFHELSRHATMILPTEGERIRCFVRGLRYRLRVDT 325

Query: 618 L*LVAFRPYFQSMVNHARMVESLRGRLPRYESEKRAHRYGHYSGSTPKGNVQ*G----RX 785
             +V+    F  +V+HAR +E +  R  +  S+KRA  +G YS S  +G         R 
Sbjct: 326 EHMVSAGRSFLDVVDHARSMEHIH-REAQGGSDKRARYHGSYSESQTRGRDSYDRPRQRF 384

Query: 786 XXXXXXXXVQLTLHISDGGSAGQSGYSVGHTSKG 887
                   VQ+ L +S+GG   QSG S G  S+G
Sbjct: 385 QQGQTSRPVQVALPVSEGGQYQQSGPSTGQNSRG 418


>gb|AAT66771.2| Putative polyprotein, identical [Solanum demissum]
          Length = 1771

 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 50/154 (32%), Positives = 68/154 (44%), Gaps = 4/154 (2%)
 Frame = +3

Query: 438 SLRVSKRDEFSKLXXXXXXXXXXXXXFHXXXXXXXXXXPIETEKIRYFMRGLYISLQLAI 617
           S+R   RD+FS+L             FH          P E E++R F+RGL   L++  
Sbjct: 386 SVRDRLRDQFSRLEQGPMTVSEYETRFHELSRHATMILPTEEERVRCFVRGLRYRLRVDT 445

Query: 618 L*LVAFRPYFQSMVNHARMVESLRGRLPRYESEKRAHRYGHYSGSTPKGNVQ*G----RX 785
             LV+    F  +V+HAR +E +  R  +  S+KRA   G YSGS  +G         R 
Sbjct: 446 EHLVSAGRSFLDVVDHARSMEHIH-REAQGGSDKRARYQGSYSGSQTRGRDSYDRPRQRF 504

Query: 786 XXXXXXXXVQLTLHISDGGSAGQSGYSVGHTSKG 887
                   VQ  L  S+GG   Q G S G  S+G
Sbjct: 505 QQGQSSRPVQAALPASEGGQYHQGGPSTGQGSRG 538


>ref|XP_004229040.1| PREDICTED: uncharacterized protein LOC101252810 [Solanum
           lycopersicum]
          Length = 223

 Score = 63.2 bits (152), Expect = 1e-07
 Identities = 35/119 (29%), Positives = 58/119 (48%)
 Frame = +1

Query: 133 RTVTAAVMTCNEGKI*EHFSNIKSSSFYGQPEEDTCEFIVSSH*RFYTLDIIELHRVNFI 312
           R  T  +MT ++ ++   F  +K   F G   ED  +F+V  H   + + I++   V F+
Sbjct: 61  RLTTGPIMTNDQHELFSKFLKLKPPVFKGAESEDAYDFLVDCHELLHKMGIVKRFGVEFV 120

Query: 313 ALQLMSYAKK*WRSYIDYRLASSPLLF*TRFYQVFLEKYVTSACE*ARGMSFLS*SRGR 489
           + Q    AK  WRS+I+ +   +P +  T F   F+EKY+       +   FLS  +GR
Sbjct: 121 SYQFQGNAKMWWRSHIECQPTEAPPMTWTSFSSFFMEKYIPRTLRDRKRDEFLSLEQGR 179


>gb|ADU56214.1| gag-pol polyprotein [Solanum lycopersicum]
          Length = 317

 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 34/119 (28%), Positives = 57/119 (47%)
 Frame = +1

Query: 133 RTVTAAVMTCNEGKI*EHFSNIKSSSFYGQPEEDTCEFIVSSH*RFYTLDIIELHRVNFI 312
           R  T  +MT ++ ++   F  +K   F G   ED  +F+V  H   + + I+E   V F+
Sbjct: 146 RLTTGPIMTNDQHELFSKFLKLKPQVFKGAESEDAYDFLVDCHELLHKMGIVERCGVEFV 205

Query: 313 ALQLMSYAKK*WRSYIDYRLASSPLLF*TRFYQVFLEKYVTSACE*ARGMSFLS*SRGR 489
           + Q    AK  WRS+++ +   +P +    F  +F+EKY        +   FLS  +GR
Sbjct: 206 SYQFQGNAKMWWRSHVECQPTEAPPMTWASFSSLFMEKYFPRTLRDRKRDEFLSLEQGR 264


>ref|XP_004253217.1| PREDICTED: uncharacterized protein LOC101263890 [Solanum
           lycopersicum]
          Length = 490

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 32/116 (27%), Positives = 57/116 (49%)
 Frame = +1

Query: 142 TAAVMTCNEGKI*EHFSNIKSSSFYGQPEEDTCEFIVSSH*RFYTLDIIELHRVNFIALQ 321
           T  +MT ++ ++   F  +K   F G   +D  +F+V  H   + + I+E   V F++ Q
Sbjct: 138 TGPIMTNDQHELFSKFLKLKPPVFKGAESKDAYDFLVDCHELLHKMGIVERFGVEFVSYQ 197

Query: 322 LMSYAKK*WRSYIDYRLASSPLLF*TRFYQVFLEKYVTSACE*ARGMSFLS*SRGR 489
               AK  WRS+++ +   +P +    F  +F+EKY+       +   FLS  +GR
Sbjct: 198 FQGNAKMWWRSHVECQPTEAPPMTWASFSSLFMEKYIPRTLRDRKRDEFLSLEQGR 253


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