BLASTX nr result
ID: Atropa21_contig00026701
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00026701
(3090 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT38724.1| Putative retrotransposon protein, identical [Sola... 343 0.0
gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum ... 345 0.0
gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum] 259 e-174
gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum] 305 e-168
ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581... 291 e-166
gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum] 340 e-163
gb|EOY19264.1| Uncharacterized protein TCM_044274 [Theobroma cacao] 257 e-140
gb|EOY08678.1| DNA/RNA polymerases superfamily protein [Theobrom... 256 e-136
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana... 248 e-131
gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobrom... 247 e-128
gb|EOY03078.1| Retrotransposon protein, putative [Theobroma cacao] 251 e-127
gb|EOY21478.1| DNA/RNA polymerases superfamily protein [Theobrom... 257 e-125
gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobrom... 255 e-123
gb|ABA95392.1| retrotransposon protein, putative, Ty3-gypsy subc... 192 e-122
gb|EOY08454.1| DNA/RNA polymerases superfamily protein [Theobrom... 255 e-119
gb|EOY20275.1| DNA/RNA polymerases superfamily protein [Theobrom... 231 e-104
gb|EOY08659.1| DNA/RNA polymerases superfamily protein [Theobrom... 256 e-100
gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, puta... 257 1e-98
gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobrom... 291 3e-97
gb|EOY21678.1| DNA/RNA polymerases superfamily protein [Theobrom... 257 5e-97
>gb|AAT38724.1| Putative retrotransposon protein, identical [Solanum demissum]
Length = 1602
Score = 319 bits (817), Expect(3) = 0.0
Identities = 153/211 (72%), Positives = 175/211 (82%)
Frame = +3
Query: 1977 RGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRNI 2156
+G DG LRY+ RLC+P VDGL+E++ME+ H+SRYS+HPG TKMY +L E YW N MK+ I
Sbjct: 1153 QGGDGVLRYQGRLCVPMVDGLQERVMEEAHSSRYSVHPGSTKMYRDLREFYWWNGMKKGI 1212
Query: 2157 EDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIVD 2336
+F+ KC NCQ VK E QRPGGLAQNI +P K EMINMDFI GLPRS +HD IWVIVD
Sbjct: 1213 AEFVAKCPNCQQVKVEHQRPGGLAQNIELPEWKWEMINMDFITGLPRSRRQHDSIWVIVD 1272
Query: 2337 RLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLGT 2516
R+TKSAHFLPVKTT SAEDYAKLYIQEIVRLHG +SII D GAQFTA FWKSFQKGLG+
Sbjct: 1273 RMTKSAHFLPVKTTHSAEDYAKLYIQEIVRLHGVPISIISDRGAQFTAQFWKSFQKGLGS 1332
Query: 2517 KVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
KV+L+T FHPQTDG E+TI TLED+LRACV
Sbjct: 1333 KVSLSTAFHPQTDGQAERTIQTLEDMLRACV 1363
Score = 234 bits (598), Expect(3) = 0.0
Identities = 138/286 (48%), Positives = 179/286 (62%), Gaps = 1/286 (0%)
Frame = +1
Query: 1126 GEGVKVGFQKIEAVKN*PQTYLNLRDKKFLRSGMLLQALLEGFYSILDSLIRLTQKKVKF 1305
G+G+KV +KIEAV+N P+ + FL + +EGF SI L +LTQK KF
Sbjct: 869 GDGIKVDTRKIEAVQNWPRPTSPTEIRSFLGLAGYYRRFVEGFSSIASPLTKLTQKTGKF 928
Query: 1306 QWPDA*EHSFEELKMRLTFFLVLTLSEGTYGFVVYYDALGVGHECIIMQHGKVIAYASRQ 1485
QW +A E SF+ELK RL VLTL EGT G VVY DA +G C++MQ+GKVIAYASRQ
Sbjct: 929 QWSEACEKSFQELKKRLITAPVLTLPEGTQGLVVYCDASRIGLGCVLMQNGKVIAYASRQ 988
Query: 1486 LKTYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDIFIDHKSLQYIFKQRKLNLKQNRRL 1665
LK +EKNY TH+LEL V+VF LK+ R+YLYGVH+DIF DHKSLQY+ Q+ LNL+Q R L
Sbjct: 989 LKVHEKNYPTHDLELAVVVFALKLWRHYLYGVHVDIFTDHKSLQYVLTQKALNLRQRRWL 1048
Query: 1666 ELKKTMM*MSSIIQEK*ICS*CS*SAID-GNLSPC*RKNRTMTKEIHRLTSLEV*LLDTE 1842
EL K K S S + G+ + R + K++HRL L V D+
Sbjct: 1049 ELLKDYDLSILYHPGKANVVADSLSRLSMGSTTHIEEGRRELAKDMHRLACLGVRFTDST 1108
Query: 1843 DGDMFV*NRFESSLVAEVKEK*FNDPYLLQLKEGIHNHKTTTFKQG 1980
+G + V ++ ESSL++EVKEK DP LL+LK + + F+QG
Sbjct: 1109 EGGIAVTSKAESSLMSEVKEKQDQDPILLELKANVQKQRVLAFEQG 1154
Score = 165 bits (417), Expect(3) = 0.0
Identities = 83/131 (63%), Positives = 99/131 (75%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
DFK NWDD LIEF YNNSYH+SI+M P +ALYG+RCRS I WFEVGE L+ DLV+Q
Sbjct: 1365 DFKSNWDDHLPLIEFAYNNSYHSSIQMAPYEALYGRRCRSPIGWFEVGEARLIGPDLVHQ 1424
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSPD 2971
MEKVK+IQE LK A S QKSY++VR LEF+VD+ V++KV P+KGVMRF KKGKLSP
Sbjct: 1425 AMEKVKVIQERLKTAQSRQKSYTDVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPR 1484
Query: 2972 IFNHTRSYERL 3004
R +R+
Sbjct: 1485 YIGPYRIVQRV 1495
Score = 343 bits (880), Expect(2) = 2e-99
Identities = 187/376 (49%), Positives = 249/376 (66%)
Frame = +2
Query: 116 VYHRIIITNLVELEMVDFDIIMNMDWLSSYYVSLGCRTKIVSFEFPSKPIIE*KDDAVSL 295
+ H+ + +L+EL+MVDFD+I+ MDWL + Y S+ CRT++V F+FPS+PI+E +
Sbjct: 536 INHKSTMVDLIELDMVDFDVILGMDWLHACYASIDCRTRVVKFQFPSEPILEWSSSSAVP 595
Query: 296 IGRFVSYLKVRKMISKEYIYYLVLVRDTDTQTPTF*SMPIVSEFLEVFSKDLPKVLSDRE 475
GRF+SYLK RK++SK IY+L V D+ + P F S+PIV EF EVF DLP + +RE
Sbjct: 596 KGRFISYLKARKLVSKGCIYHLARVNDSSVEIPYFQSVPIVREFPEVFPDDLPGIPPERE 655
Query: 476 IKFRLDLLSDTKTIPISPYRMALIELKELKSVKISL**EIY*AKCLTLGCTVLFVRKKYG 655
I F +DL+ DT+ I I PYRMA ELKELK + L G VLFVRKK G
Sbjct: 656 IDFGIDLIPDTRPISIPPYRMAPAELKELKDL---LEKGFIRPSVSPWGAPVLFVRKKDG 712
Query: 656 SIHMYIDYHQLNKVTIKNKYSLSRIDDLFEQLQGV*CYSKINIILGYHQFKVKRVDILKI 835
S+ + IDY QLNKVTIKNKY L RIDDLF+QLQG C+SKI++ GYHQ +V+ DI K
Sbjct: 713 SLRICIDYRQLNKVTIKNKYPLPRIDDLFDQLQGATCFSKIDLRSGYHQLRVRERDIPKT 772
Query: 836 AFKTRYRHFEFCVISFGLTNAPAVFY*SYEQDLQALL*SFDYCVY**YSNLFS**G*SYR 1015
AF+TRY H+EF V+SFGLTNAPA F + + L F ++ ++S +
Sbjct: 773 AFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFRPYLDMF-VIIFIDDILIYSRNEEDHA 831
Query: 1016 TSQNSIANTVQDLKLYAKNFKCEFWLKSMAFLGHLILEKA*RLVFRKLRQ*RISPRPTSI 1195
+ ++ T++D +LYAK KCEFWLKS+AFLGH++ ++ RK+ + PRPTS
Sbjct: 832 SHLRTVLQTLKDKELYAKFSKCEFWLKSVAFLGHIVSGDGIKVDTRKIEAVQNWPRPTSP 891
Query: 1196 SEIRNFLGLACYYRRF 1243
+EIR+FLGLA YYRRF
Sbjct: 892 TEIRSFLGLAGYYRRF 907
Score = 49.3 bits (116), Expect(2) = 2e-99
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +3
Query: 3 VAKKFRIEQERLHKPFEVFTPVGESVIVRRVYRSCPV 113
VA KF + ERL +PF V TPVGES++ RVYR CPV
Sbjct: 498 VANKFDVLPERLCEPFCVSTPVGESILAERVYRDCPV 534
Score = 63.2 bits (152), Expect = 7e-07
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +1
Query: 2926 KGCDEI*KERKTQSRYI*PYKILRKIDQVSYELELPQDLIIVHLVFHVSMFRKCV 3090
KG K+ K RYI PY+I++++ V+YELELPQ+L VH VFH+SM +KC+
Sbjct: 1470 KGVMRFGKKGKLSPRYIGPYRIVQRVGSVAYELELPQELAAVHPVFHISMLKKCI 1524
>gb|AAT38744.1| Putative gag-pol polyprotein, identical [Solanum demissum]
Length = 1515
Score = 318 bits (814), Expect(3) = 0.0
Identities = 152/211 (72%), Positives = 175/211 (82%)
Frame = +3
Query: 1977 RGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRNI 2156
+G DG LRY+ RLC+P VDGL+E++ME+ H+SRYS+HPG TKMY +L E YW N MK+ I
Sbjct: 1147 QGGDGVLRYQGRLCVPMVDGLQERVMEEAHSSRYSVHPGSTKMYRDLREFYWWNGMKKGI 1206
Query: 2157 EDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIVD 2336
+F+ KC NCQ VK E QRPGGLAQNI +P K EMINMDFI GLPRS +HD IWVIVD
Sbjct: 1207 AEFVAKCPNCQQVKVEHQRPGGLAQNIELPEWKWEMINMDFITGLPRSRRQHDSIWVIVD 1266
Query: 2337 RLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLGT 2516
R+TKSAHFLPV+TT SAEDYAKLYIQEIVRLHG +SII D GAQFTA FWKSFQKGLG+
Sbjct: 1267 RMTKSAHFLPVRTTHSAEDYAKLYIQEIVRLHGVPISIISDRGAQFTAQFWKSFQKGLGS 1326
Query: 2517 KVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
KV+L+T FHPQTDG E+TI TLED+LRACV
Sbjct: 1327 KVSLSTAFHPQTDGQAERTIQTLEDMLRACV 1357
Score = 235 bits (600), Expect(3) = 0.0
Identities = 138/286 (48%), Positives = 180/286 (62%), Gaps = 1/286 (0%)
Frame = +1
Query: 1126 GEGVKVGFQKIEAVKN*PQTYLNLRDKKFLRSGMLLQALLEGFYSILDSLIRLTQKKVKF 1305
G+G+KV +KIEAV+N P+ + FL + +EGF SI L +LTQK KF
Sbjct: 863 GDGIKVDTRKIEAVQNWPRPTSPTEIRSFLGLAGYYRRFVEGFSSIASPLTKLTQKTGKF 922
Query: 1306 QWPDA*EHSFEELKMRLTFFLVLTLSEGTYGFVVYYDALGVGHECIIMQHGKVIAYASRQ 1485
QW +A E SF+ELK RL VLTL EGT G VVY DA +G C++MQ+GKVIAYASRQ
Sbjct: 923 QWSEACEKSFQELKKRLITAPVLTLPEGTQGLVVYCDASRIGLGCVLMQNGKVIAYASRQ 982
Query: 1486 LKTYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDIFIDHKSLQYIFKQRKLNLKQNRRL 1665
LK +EKNY TH+LEL V+VF LK+ R+YLYGVH+DIF DHKSLQY+ Q++LNL+Q R L
Sbjct: 983 LKVHEKNYPTHDLELAVVVFALKLWRHYLYGVHVDIFTDHKSLQYVLTQKELNLRQRRWL 1042
Query: 1666 ELKKTMM*MSSIIQEK*ICS*CS*SAID-GNLSPC*RKNRTMTKEIHRLTSLEV*LLDTE 1842
EL K K S S + G+ + R + K++HRL L V D+
Sbjct: 1043 ELLKDYDLSILYHPGKANVVADSLSRLSMGSTTHIEEGRRELAKDMHRLACLGVRFTDST 1102
Query: 1843 DGDMFV*NRFESSLVAEVKEK*FNDPYLLQLKEGIHNHKTTTFKQG 1980
+G + V ++ ESSL++EVKEK DP LL+LK + + F+QG
Sbjct: 1103 EGGIAVTSKAESSLMSEVKEKQDQDPILLELKANVQKQRVLAFEQG 1148
Score = 165 bits (417), Expect(3) = 0.0
Identities = 83/131 (63%), Positives = 99/131 (75%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
DFK NWDD LIEF YNNSYH+SI+M P +ALYG+RCRS I WFEVGE L+ DLV+Q
Sbjct: 1359 DFKSNWDDHLPLIEFAYNNSYHSSIQMAPYEALYGRRCRSPIGWFEVGEARLIGPDLVHQ 1418
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSPD 2971
MEKVK+IQE LK A S QKSY++VR LEF+VD+ V++KV P+KGVMRF KKGKLSP
Sbjct: 1419 AMEKVKVIQERLKTAQSRQKSYTDVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPR 1478
Query: 2972 IFNHTRSYERL 3004
R +R+
Sbjct: 1479 YIGPYRIVQRV 1489
Score = 345 bits (885), Expect(2) = e-100
Identities = 188/376 (50%), Positives = 249/376 (66%)
Frame = +2
Query: 116 VYHRIIITNLVELEMVDFDIIMNMDWLSSYYVSLGCRTKIVSFEFPSKPIIE*KDDAVSL 295
+ H+ + +L+EL+MVDFD+I+ MDWL + Y S+ CRT++V F+FPS+PI+E +
Sbjct: 530 INHKSTMVDLIELDMVDFDVILGMDWLHACYASIDCRTRVVKFQFPSEPILEWSSSSAVP 589
Query: 296 IGRFVSYLKVRKMISKEYIYYLVLVRDTDTQTPTF*SMPIVSEFLEVFSKDLPKVLSDRE 475
GRF+SYLK RK++SK IY+L V D+ + P F S+PIV EF EVF DLP + +RE
Sbjct: 590 KGRFISYLKARKLVSKGCIYHLARVNDSSVEIPYFQSVPIVREFPEVFPNDLPGIPPERE 649
Query: 476 IKFRLDLLSDTKTIPISPYRMALIELKELKSVKISL**EIY*AKCLTLGCTVLFVRKKYG 655
I F +DL+ DT+ I I PYRMA ELKELK + L G VLFVRKK G
Sbjct: 650 IDFGIDLIPDTRPISIPPYRMAPAELKELKDL---LEKGFIRPSVSPWGAPVLFVRKKDG 706
Query: 656 SIHMYIDYHQLNKVTIKNKYSLSRIDDLFEQLQGV*CYSKINIILGYHQFKVKRVDILKI 835
S+ M IDY QLNKVTIKNKY L RIDDLF+QLQG C+SKI++ GYHQ +V+ DI K
Sbjct: 707 SLRMCIDYRQLNKVTIKNKYPLPRIDDLFDQLQGATCFSKIDLRSGYHQLRVRERDIPKT 766
Query: 836 AFKTRYRHFEFCVISFGLTNAPAVFY*SYEQDLQALL*SFDYCVY**YSNLFS**G*SYR 1015
AF+TRY H+EF V+SFGLTNAPA F + + L F ++ ++S +
Sbjct: 767 AFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFRPYLDMF-VIIFIDDILIYSRNEEDHA 825
Query: 1016 TSQNSIANTVQDLKLYAKNFKCEFWLKSMAFLGHLILEKA*RLVFRKLRQ*RISPRPTSI 1195
+ ++ T++D +LYAK KCEFWLKS+AFLGH++ ++ RK+ + PRPTS
Sbjct: 826 SHLRTVLQTLKDKELYAKFSKCEFWLKSVAFLGHIVSGDGIKVDTRKIEAVQNWPRPTSP 885
Query: 1196 SEIRNFLGLACYYRRF 1243
+EIR+FLGLA YYRRF
Sbjct: 886 TEIRSFLGLAGYYRRF 901
Score = 49.3 bits (116), Expect(2) = e-100
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +3
Query: 3 VAKKFRIEQERLHKPFEVFTPVGESVIVRRVYRSCPV 113
VA KF + ERL +PF V TPVGES++ RVYR CPV
Sbjct: 492 VANKFDVLPERLCEPFCVSTPVGESILAERVYRDCPV 528
>gb|ABI34354.1| Retrotransposon gag protein [Solanum demissum]
Length = 4543
Score = 259 bits (663), Expect(3) = e-174
Identities = 130/211 (61%), Positives = 151/211 (71%)
Frame = +3
Query: 1977 RGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRNI 2156
+G DG LRY+ RLC+P VDGL+EKIME+ H+SRYS+HPG TKMY +L E+YW N MK+ I
Sbjct: 929 QGGDGALRYQGRLCVPMVDGLQEKIMEEAHSSRYSVHPGSTKMYRDLREVYWWNGMKKGI 988
Query: 2157 EDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIVD 2336
+F+ KC NCQ VK E QRPGGLAQ I +P K EMINMDFI GLPRS +HD IWVIVD
Sbjct: 989 AEFVAKCPNCQQVKVEHQRPGGLAQRIELPEWKWEMINMDFITGLPRSRRQHDSIWVIVD 1048
Query: 2337 RLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLGT 2516
R+TKSAHFLPVKTT++ EDYAKLY+QEI KGLG+
Sbjct: 1049 RMTKSAHFLPVKTTNTTEDYAKLYVQEI---------------------------KGLGS 1081
Query: 2517 KVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
KVNL+T FHPQTDG E TI LED+LRACV
Sbjct: 1082 KVNLSTAFHPQTDGQAEHTIQILEDMLRACV 1112
Score = 259 bits (663), Expect(3) = e-174
Identities = 130/211 (61%), Positives = 151/211 (71%)
Frame = +3
Query: 1977 RGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRNI 2156
+G DG LRY+ RLC+P VDGL+EKIME+ H+SRYS+HPG TKMY +L E+YW N MK+ I
Sbjct: 2439 QGGDGALRYQGRLCVPMVDGLQEKIMEEAHSSRYSVHPGSTKMYRDLREVYWWNGMKKGI 2498
Query: 2157 EDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIVD 2336
+F+ KC NCQ VK E QRPGGLAQ I +P K EMINMDFI GLPRS +HD IWVIVD
Sbjct: 2499 AEFVAKCPNCQQVKVEHQRPGGLAQRIELPEWKWEMINMDFITGLPRSRRQHDSIWVIVD 2558
Query: 2337 RLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLGT 2516
R+TKSAHFLPVKTT++ EDYAKLY+QEI KGLG+
Sbjct: 2559 RMTKSAHFLPVKTTNTTEDYAKLYVQEI---------------------------KGLGS 2591
Query: 2517 KVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
KVNL+T FHPQTDG E TI LED+LRACV
Sbjct: 2592 KVNLSTAFHPQTDGQAEHTIQILEDMLRACV 2622
Score = 259 bits (663), Expect(3) = e-174
Identities = 130/211 (61%), Positives = 151/211 (71%)
Frame = +3
Query: 1977 RGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRNI 2156
+G DG LRY+ RLC+P VDGL+EKIME+ H+SRYS+HPG TKMY +L E+YW N MK+ I
Sbjct: 3949 QGGDGALRYQGRLCVPMVDGLQEKIMEEAHSSRYSVHPGSTKMYRDLREVYWWNGMKKGI 4008
Query: 2157 EDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIVD 2336
+F+ KC NCQ VK E QRPGGLAQ I +P K EMINMDFI GLPRS +HD IWVIVD
Sbjct: 4009 AEFVAKCPNCQQVKVEHQRPGGLAQRIELPEWKWEMINMDFITGLPRSRRQHDSIWVIVD 4068
Query: 2337 RLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLGT 2516
R+TKSAHFLPVKTT++ EDYAKLY+QEI KGLG+
Sbjct: 4069 RMTKSAHFLPVKTTNTTEDYAKLYVQEI---------------------------KGLGS 4101
Query: 2517 KVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
KVNL+T FHPQTDG E TI LED+LRACV
Sbjct: 4102 KVNLSTAFHPQTDGQAEHTIQILEDMLRACV 4132
Score = 238 bits (607), Expect(3) = e-174
Identities = 141/286 (49%), Positives = 179/286 (62%), Gaps = 1/286 (0%)
Frame = +1
Query: 1126 GEGVKVGFQKIEAVKN*PQTYLNLRDKKFLRSGMLLQALLEGFYSILDSLIRLTQKKVKF 1305
G+G+KV KIEAV+N P+ + FL + +EGF +I L +LTQK VK
Sbjct: 645 GDGIKVDTWKIEAVQNWPRPTSPTEIRSFLGLAGYYRRFVEGFSTIASPLTKLTQKTVKL 704
Query: 1306 QWPDA*EHSFEELKMRLTFFLVLTLSEGTYGFVVYYDALGVGHECIIMQHGKVIAYASRQ 1485
QW +A E SF+ELK RLT VLTL EGT GFVV+ DA VG C++MQ+ KVIAYASRQ
Sbjct: 705 QWSEACEKSFQELKKRLTTAPVLTLPEGTQGFVVHCDASRVGLGCVLMQNDKVIAYASRQ 764
Query: 1486 LKTYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDIFIDHKSLQYIFKQRKLNLKQNRRL 1665
LK +EKNY TH+LEL +VF LKI R+YLYGVH+DIF DHKSLQY+ Q++LNL+Q R L
Sbjct: 765 LKAHEKNYPTHDLELAAVVFALKIWRHYLYGVHVDIFTDHKSLQYVLTQKELNLRQRRWL 824
Query: 1666 ELKKTMM*MSSIIQEK*ICS*CS*SAID-GNLSPC*RKNRTMTKEIHRLTSLEV*LLDTE 1842
EL K + K S S + G+ + R +TK++HRL L V D+
Sbjct: 825 ELLKDYVLSILYHPGKANVVADSLSRLSMGSTAHIEEGRRELTKDVHRLACLGVRFTDSA 884
Query: 1843 DGDMFV*NRFESSLVAEVKEK*FNDPYLLQLKEGIHNHKTTTFKQG 1980
G + V NR ESSLV EVK+K DP LL+LK + + F+QG
Sbjct: 885 KGGIAVANRAESSLVLEVKKKQDQDPILLELKANVQKQRVLAFEQG 930
Score = 238 bits (607), Expect(3) = e-174
Identities = 141/286 (49%), Positives = 179/286 (62%), Gaps = 1/286 (0%)
Frame = +1
Query: 1126 GEGVKVGFQKIEAVKN*PQTYLNLRDKKFLRSGMLLQALLEGFYSILDSLIRLTQKKVKF 1305
G+G+KV KIEAV+N P+ + FL + +EGF +I L +LTQK VK
Sbjct: 2155 GDGIKVDTWKIEAVQNWPRPTSPTEIRSFLGLAGYYRRFVEGFSTIASPLTKLTQKTVKL 2214
Query: 1306 QWPDA*EHSFEELKMRLTFFLVLTLSEGTYGFVVYYDALGVGHECIIMQHGKVIAYASRQ 1485
QW +A E SF+ELK RLT VLTL EGT GFVV+ DA VG C++MQ+ KVIAYASRQ
Sbjct: 2215 QWSEACEKSFQELKKRLTTAPVLTLPEGTQGFVVHCDASRVGLGCVLMQNDKVIAYASRQ 2274
Query: 1486 LKTYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDIFIDHKSLQYIFKQRKLNLKQNRRL 1665
LK +EKNY TH+LEL +VF LKI R+YLYGVH+DIF DHKSLQY+ Q++LNL+Q R L
Sbjct: 2275 LKAHEKNYPTHDLELAAVVFALKIWRHYLYGVHVDIFTDHKSLQYVLTQKELNLRQRRWL 2334
Query: 1666 ELKKTMM*MSSIIQEK*ICS*CS*SAID-GNLSPC*RKNRTMTKEIHRLTSLEV*LLDTE 1842
EL K + K S S + G+ + R +TK++HRL L V D+
Sbjct: 2335 ELLKDYVLSILYHPGKANVVADSLSRLSMGSTAHIEEGRRELTKDVHRLACLGVRFTDSA 2394
Query: 1843 DGDMFV*NRFESSLVAEVKEK*FNDPYLLQLKEGIHNHKTTTFKQG 1980
G + V NR ESSLV EVK+K DP LL+LK + + F+QG
Sbjct: 2395 KGGIAVANRAESSLVLEVKKKQDQDPILLELKANVQKQRVLAFEQG 2440
Score = 238 bits (607), Expect(3) = e-174
Identities = 141/286 (49%), Positives = 179/286 (62%), Gaps = 1/286 (0%)
Frame = +1
Query: 1126 GEGVKVGFQKIEAVKN*PQTYLNLRDKKFLRSGMLLQALLEGFYSILDSLIRLTQKKVKF 1305
G+G+KV KIEAV+N P+ + FL + +EGF +I L +LTQK VK
Sbjct: 3665 GDGIKVDTWKIEAVQNWPRPTSPTEIRSFLGLAGYYRRFVEGFSTIASPLTKLTQKTVKL 3724
Query: 1306 QWPDA*EHSFEELKMRLTFFLVLTLSEGTYGFVVYYDALGVGHECIIMQHGKVIAYASRQ 1485
QW +A E SF+ELK RLT VLTL EGT GFVV+ DA VG C++MQ+ KVIAYASRQ
Sbjct: 3725 QWSEACEKSFQELKKRLTTAPVLTLPEGTQGFVVHCDASRVGLGCVLMQNDKVIAYASRQ 3784
Query: 1486 LKTYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDIFIDHKSLQYIFKQRKLNLKQNRRL 1665
LK +EKNY TH+LEL +VF LKI R+YLYGVH+DIF DHKSLQY+ Q++LNL+Q R L
Sbjct: 3785 LKAHEKNYPTHDLELAAVVFALKIWRHYLYGVHVDIFTDHKSLQYVLTQKELNLRQRRWL 3844
Query: 1666 ELKKTMM*MSSIIQEK*ICS*CS*SAID-GNLSPC*RKNRTMTKEIHRLTSLEV*LLDTE 1842
EL K + K S S + G+ + R +TK++HRL L V D+
Sbjct: 3845 ELLKDYVLSILYHPGKANVVADSLSRLSMGSTAHIEEGRRELTKDVHRLACLGVRFTDSA 3904
Query: 1843 DGDMFV*NRFESSLVAEVKEK*FNDPYLLQLKEGIHNHKTTTFKQG 1980
G + V NR ESSLV EVK+K DP LL+LK + + F+QG
Sbjct: 3905 KGGIAVANRAESSLVLEVKKKQDQDPILLELKANVQKQRVLAFEQG 3950
Score = 165 bits (418), Expect(3) = e-174
Identities = 83/131 (63%), Positives = 100/131 (76%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
DFKGNWDD LIEF YNNSYH SI+M P +ALYG+RCRS I WFEVGE +L+ DLV+Q
Sbjct: 1114 DFKGNWDDHLPLIEFAYNNSYHPSIQMAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQ 1173
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSPD 2971
MEKVK+I+E LK A S QKSY++VR LEF+VD+ V++KV P+KGVMRF KKGKLSP
Sbjct: 1174 AMEKVKVIKERLKTAQSRQKSYTDVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPR 1233
Query: 2972 IFNHTRSYERL 3004
R +R+
Sbjct: 1234 YIGPYRIAKRI 1244
Score = 165 bits (418), Expect(3) = e-174
Identities = 83/131 (63%), Positives = 100/131 (76%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
DFKGNWDD LIEF YNNSYH SI+M P +ALYG+RCRS I WFEVGE +L+ DLV+Q
Sbjct: 2624 DFKGNWDDHLPLIEFAYNNSYHPSIQMAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQ 2683
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSPD 2971
MEKVK+I+E LK A S QKSY++VR LEF+VD+ V++KV P+KGVMRF KKGKLSP
Sbjct: 2684 AMEKVKVIKERLKTAQSRQKSYTDVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPR 2743
Query: 2972 IFNHTRSYERL 3004
R +R+
Sbjct: 2744 YIGPYRIAKRI 2754
Score = 165 bits (418), Expect(3) = e-174
Identities = 83/131 (63%), Positives = 100/131 (76%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
DFKGNWDD LIEF YNNSYH SI+M P +ALYG+RCRS I WFEVGE +L+ DLV+Q
Sbjct: 4134 DFKGNWDDHLPLIEFAYNNSYHPSIQMAPYEALYGRRCRSPIGWFEVGEAQLIGPDLVHQ 4193
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSPD 2971
MEKVK+I+E LK A S QKSY++VR LEF+VD+ V++KV P+KGVMRF KKGKLSP
Sbjct: 4194 AMEKVKVIKERLKTAQSRQKSYTDVRRRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPR 4253
Query: 2972 IFNHTRSYERL 3004
R +R+
Sbjct: 4254 YIGPYRIAKRI 4264
Score = 176 bits (445), Expect = 7e-41
Identities = 97/190 (51%), Positives = 127/190 (66%)
Frame = +2
Query: 674 DYHQLNKVTIKNKYSLSRIDDLFEQLQGV*CYSKINIILGYHQFKVKRVDILKIAFKTRY 853
DY QLNKVTIKNKY L RIDDLF+QLQG C+SKI++ GYHQ +V+ DI K AF+TRY
Sbjct: 495 DYRQLNKVTIKNKYPLPRIDDLFDQLQGATCFSKIDLRSGYHQLRVRECDIPKTAFRTRY 554
Query: 854 RHFEFCVISFGLTNAPAVFY*SYEQDLQALL*SFDYCVY**YSNLFS**G*SYRTSQNSI 1033
H+EF V+SFGLTNAPA F + + L F V+ ++S + + ++
Sbjct: 555 GHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDMF-VIVFIDDILIYSRNEGDHASHLRTV 613
Query: 1034 ANTVQDLKLYAKNFKCEFWLKSMAFLGHLILEKA*RLVFRKLRQ*RISPRPTSISEIRNF 1213
T++D +LYAK KCEFWLKS+AFLGH++ ++ K+ + PRPTS +EIR+F
Sbjct: 614 LQTLKDKELYAKFSKCEFWLKSVAFLGHIVSGDGIKVDTWKIEAVQNWPRPTSPTEIRSF 673
Query: 1214 LGLACYYRRF 1243
LGLA YYRRF
Sbjct: 674 LGLAGYYRRF 683
Score = 176 bits (445), Expect = 7e-41
Identities = 97/190 (51%), Positives = 127/190 (66%)
Frame = +2
Query: 674 DYHQLNKVTIKNKYSLSRIDDLFEQLQGV*CYSKINIILGYHQFKVKRVDILKIAFKTRY 853
DY QLNKVTIKNKY L RIDDLF+QLQG C+SKI++ GYHQ +V+ DI K AF+TRY
Sbjct: 2005 DYRQLNKVTIKNKYPLPRIDDLFDQLQGATCFSKIDLRSGYHQLRVRECDIPKTAFRTRY 2064
Query: 854 RHFEFCVISFGLTNAPAVFY*SYEQDLQALL*SFDYCVY**YSNLFS**G*SYRTSQNSI 1033
H+EF V+SFGLTNAPA F + + L F V+ ++S + + ++
Sbjct: 2065 GHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDMF-VIVFIDDILIYSRNEGDHASHLRTV 2123
Query: 1034 ANTVQDLKLYAKNFKCEFWLKSMAFLGHLILEKA*RLVFRKLRQ*RISPRPTSISEIRNF 1213
T++D +LYAK KCEFWLKS+AFLGH++ ++ K+ + PRPTS +EIR+F
Sbjct: 2124 LQTLKDKELYAKFSKCEFWLKSVAFLGHIVSGDGIKVDTWKIEAVQNWPRPTSPTEIRSF 2183
Query: 1214 LGLACYYRRF 1243
LGLA YYRRF
Sbjct: 2184 LGLAGYYRRF 2193
Score = 176 bits (445), Expect = 7e-41
Identities = 97/190 (51%), Positives = 127/190 (66%)
Frame = +2
Query: 674 DYHQLNKVTIKNKYSLSRIDDLFEQLQGV*CYSKINIILGYHQFKVKRVDILKIAFKTRY 853
DY QLNKVTIKNKY L RIDDLF+QLQG C+SKI++ GYHQ +V+ DI K AF+TRY
Sbjct: 3515 DYRQLNKVTIKNKYPLPRIDDLFDQLQGATCFSKIDLRSGYHQLRVRECDIPKTAFRTRY 3574
Query: 854 RHFEFCVISFGLTNAPAVFY*SYEQDLQALL*SFDYCVY**YSNLFS**G*SYRTSQNSI 1033
H+EF V+SFGLTNAPA F + + L F V+ ++S + + ++
Sbjct: 3575 GHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDMF-VIVFIDDILIYSRNEGDHASHLRTV 3633
Query: 1034 ANTVQDLKLYAKNFKCEFWLKSMAFLGHLILEKA*RLVFRKLRQ*RISPRPTSISEIRNF 1213
T++D +LYAK KCEFWLKS+AFLGH++ ++ K+ + PRPTS +EIR+F
Sbjct: 3634 LQTLKDKELYAKFSKCEFWLKSVAFLGHIVSGDGIKVDTWKIEAVQNWPRPTSPTEIRSF 3693
Query: 1214 LGLACYYRRF 1243
LGLA YYRRF
Sbjct: 3694 LGLAGYYRRF 3703
Score = 62.4 bits (150), Expect(2) = 4e-15
Identities = 26/52 (50%), Positives = 39/52 (75%)
Frame = +2
Query: 116 VYHRIIITNLVELEMVDFDIIMNMDWLSSYYVSLGCRTKIVSFEFPSKPIIE 271
+ H+ +LVEL+MV+FD+I+ MDWL + Y SL CRT+ V F+F ++P+IE
Sbjct: 434 ISHKSTKADLVELDMVNFDVILGMDWLHACYASLDCRTRAVKFQFLNEPVIE 485
Score = 62.4 bits (150), Expect(2) = 4e-15
Identities = 26/52 (50%), Positives = 39/52 (75%)
Frame = +2
Query: 116 VYHRIIITNLVELEMVDFDIIMNMDWLSSYYVSLGCRTKIVSFEFPSKPIIE 271
+ H+ +LVEL+MV+FD+I+ MDWL + Y SL CRT+ V F+F ++P+IE
Sbjct: 1944 ISHKSTKADLVELDMVNFDVILGMDWLHACYASLDCRTRAVKFQFLNEPVIE 1995
Score = 62.4 bits (150), Expect(2) = 4e-15
Identities = 26/52 (50%), Positives = 39/52 (75%)
Frame = +2
Query: 116 VYHRIIITNLVELEMVDFDIIMNMDWLSSYYVSLGCRTKIVSFEFPSKPIIE 271
+ H+ +LVEL+MV+FD+I+ MDWL + Y SL CRT+ V F+F ++P+IE
Sbjct: 3454 ISHKSTKADLVELDMVNFDVILGMDWLHACYASLDCRTRAVKFQFLNEPVIE 3505
Score = 48.5 bits (114), Expect(2) = 4e-15
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +3
Query: 3 VAKKFRIEQERLHKPFEVFTPVGESVIVRRVYRSCPV 113
VA +F + ERL +PF V TPVGES++ RVYR CPV
Sbjct: 396 VANQFEVLPERLCEPFCVSTPVGESILAERVYRDCPV 432
Score = 48.5 bits (114), Expect(2) = 4e-15
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +3
Query: 3 VAKKFRIEQERLHKPFEVFTPVGESVIVRRVYRSCPV 113
VA +F + ERL +PF V TPVGES++ RVYR CPV
Sbjct: 1906 VANQFEVLPERLCEPFCVSTPVGESILAERVYRDCPV 1942
Score = 48.5 bits (114), Expect(2) = 4e-15
Identities = 22/37 (59%), Positives = 27/37 (72%)
Frame = +3
Query: 3 VAKKFRIEQERLHKPFEVFTPVGESVIVRRVYRSCPV 113
VA +F + ERL +PF V TPVGES++ RVYR CPV
Sbjct: 3416 VANQFEVLPERLCEPFCVSTPVGESILAERVYRDCPV 3452
Score = 63.2 bits (152), Expect = 7e-07
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +1
Query: 2926 KGCDEI*KERKTQSRYI*PYKILRKIDQVSYELELPQDLIIVHLVFHVSMFRKCV 3090
KG K+ K RYI PY+I ++I V+YELELPQ+L VH VFH+SM +KC+
Sbjct: 1219 KGVMRFGKKGKLSPRYIGPYRIAKRIGNVAYELELPQELAAVHPVFHISMLKKCI 1273
Score = 63.2 bits (152), Expect = 7e-07
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +1
Query: 2926 KGCDEI*KERKTQSRYI*PYKILRKIDQVSYELELPQDLIIVHLVFHVSMFRKCV 3090
KG K+ K RYI PY+I ++I V+YELELPQ+L VH VFH+SM +KC+
Sbjct: 2729 KGVMRFGKKGKLSPRYIGPYRIAKRIGNVAYELELPQELAAVHPVFHISMLKKCI 2783
Score = 63.2 bits (152), Expect = 7e-07
Identities = 29/55 (52%), Positives = 38/55 (69%)
Frame = +1
Query: 2926 KGCDEI*KERKTQSRYI*PYKILRKIDQVSYELELPQDLIIVHLVFHVSMFRKCV 3090
KG K+ K RYI PY+I ++I V+YELELPQ+L VH VFH+SM +KC+
Sbjct: 4239 KGVMRFGKKGKLSPRYIGPYRIAKRIGNVAYELELPQELAAVHPVFHISMLKKCI 4293
>gb|AAV31171.1| Putative polyprotein, identical [Solanum tuberosum]
Length = 1487
Score = 295 bits (755), Expect(3) = e-168
Identities = 145/211 (68%), Positives = 169/211 (80%)
Frame = +3
Query: 1977 RGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRNI 2156
+G DG LRY+ RLC+P VDGL+++IME+ H+SRYSIHPG+TKMY +L E+YW N MK+ I
Sbjct: 1038 QGGDGVLRYQGRLCVPMVDGLQKRIMEEAHSSRYSIHPGFTKMYRDLREVYWWNGMKKGI 1097
Query: 2157 EDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIVD 2336
+F+ KC NCQ VK E QR GGLAQ I + K EMINMDFI GLPRS +HD IWVIVD
Sbjct: 1098 AEFVAKCPNCQQVKVEHQRLGGLAQRIELLELKWEMINMDFITGLPRSRRQHDSIWVIVD 1157
Query: 2337 RLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLGT 2516
R+TKSAHFLPVKTT+SAEDYAKLYIQE+VRLHG +SII + GAQ FWK FQKGLG
Sbjct: 1158 RMTKSAHFLPVKTTNSAEDYAKLYIQEVVRLHGVPISIISNRGAQ----FWKFFQKGLGL 1213
Query: 2517 KVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
VNL+T FHPQTDG E+TI TLED+LRACV
Sbjct: 1214 NVNLSTAFHPQTDGQAERTIQTLEDMLRACV 1244
Score = 185 bits (470), Expect(3) = e-168
Identities = 118/257 (45%), Positives = 150/257 (58%), Gaps = 1/257 (0%)
Frame = +1
Query: 1126 GEGVKVGFQKIEAVKN*PQTYLNLRDKKFLRSGMLLQALLEGFYSILDSLIRLTQKKVKF 1305
G+G+KV +KIEAVKN P++ + FL + +EGF SI L +LTQK VKF
Sbjct: 786 GDGIKVDTRKIEAVKNCPRSISPTEIRSFLGLVGYYRRFVEGFSSIASPLTKLTQKTVKF 845
Query: 1306 QWPDA*EHSFEELKMRLTFFLVLTLSEGTYGFVVYYDALGVGHECIIMQHGKVIAYASRQ 1485
QW +A E SF+ELK RL VLTL EGT FVVY DA +G
Sbjct: 846 QWSEACEKSFQELKKRLISTPVLTLPEGTQSFVVYCDASRIG-----------------L 888
Query: 1486 LKTYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDIFIDHKSLQYIFKQRKLNLKQNRRL 1665
LK +EKNY TH+LEL V+VF LKI R+YLYGVH+D+F DHKSLQY+ Q++LNL+Q R L
Sbjct: 889 LKVHEKNYPTHDLELAVVVFVLKIWRHYLYGVHVDVFTDHKSLQYVLTQKELNLRQRRWL 948
Query: 1666 ELKKTMM*MSSIIQEK*ICS*CS*SAID-GNLSPC*RKNRTMTKEIHRLTSLEV*LLDTE 1842
EL K K S S + GN + + R + K++HRL L V L+D+
Sbjct: 949 ELLKDYDLSILYHPGKANVVADSLSRLSMGNTTHIEEEKRELAKDVHRLACLGVRLIDSA 1008
Query: 1843 DGDMFV*NRFESSLVAE 1893
G + V N ESSLV+E
Sbjct: 1009 KGGISVTNEAESSLVSE 1025
Score = 163 bits (413), Expect(3) = e-168
Identities = 83/131 (63%), Positives = 99/131 (75%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
DFKGNWDD LIEF YNNSYH+SI+M P +ALYG+RCRS I WFEVGE L+ +LV+Q
Sbjct: 1246 DFKGNWDDHLPLIEFAYNNSYHSSIQMAPYEALYGRRCRSPIGWFEVGEAGLIGPNLVHQ 1305
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSPD 2971
MEKVK+IQE LK A S QKSY++VR LEF+VDN V++KV P+KGVMR KKGKLSP
Sbjct: 1306 AMEKVKVIQERLKTAQSRQKSYTDVRRRALEFEVDNWVYLKVSPMKGVMRVGKKGKLSPR 1365
Query: 2972 IFNHTRSYERL 3004
R +R+
Sbjct: 1366 YIGPYRIAKRI 1376
Score = 305 bits (781), Expect(2) = 7e-87
Identities = 172/376 (45%), Positives = 231/376 (61%)
Frame = +2
Query: 116 VYHRIIITNLVELEMVDFDIIMNMDWLSSYYVSLGCRTKIVSFEFPSKPIIE*KDDAVSL 295
+ H+ + +LV+L+MVDFD+I MDWL + Y SL CRT++V F+FP++P+IE +V
Sbjct: 477 INHKSTMADLVDLDMVDFDVISGMDWLHACYTSLDCRTRVVKFQFPNEPVIEWSSSSVVP 536
Query: 296 IGRFVSYLKVRKMISKEYIYYLVLVRDTDTQTPTF*SMPIVSEFLEVFSKDLPKVLSDRE 475
G F+SYLK RK++SK +Y+LV V D+ + P F S+PIV EF EVF DLP + S+RE
Sbjct: 537 KGCFISYLKARKLVSKGCVYHLVRVHDSSVKMPPFQSVPIVREFPEVFPDDLPGIPSERE 596
Query: 476 IKFRLDLLSDTKTIPISPYRMALIELKELKSVKISL**EIY*AKCLTLGCTVLFVRKKYG 655
I+F + L+ DT+ I I PYRMA ELKELK L
Sbjct: 597 IEFGIGLIPDTRPISIPPYRMAPAELKELKEQLKDL------------------------ 632
Query: 656 SIHMYIDYHQLNKVTIKNKYSLSRIDDLFEQLQGV*CYSKINIILGYHQFKVKRVDILKI 835
+ DY QLNKVTIKNKY LSRIDDLF+QLQG C+SKI++ GYHQ +V+ DI KI
Sbjct: 633 ---LDKDYRQLNKVTIKNKYPLSRIDDLFDQLQGATCFSKIDLRSGYHQLRVRGCDIPKI 689
Query: 836 AFKTRYRHFEFCVISFGLTNAPAVFY*SYEQDLQALL*SFDYCVY**YSNLFS**G*SYR 1015
F+ Y H+EF V+SFG TNAPA F + + L F V+ ++S +
Sbjct: 690 TFRIIYGHYEFLVMSFGFTNAPAAFMDLMNRVFKPYLDMF-VIVFIDDILIYSRNKEDHA 748
Query: 1016 TSQNSIANTVQDLKLYAKNFKCEFWLKSMAFLGHLILEKA*RLVFRKLRQ*RISPRPTSI 1195
+ + T++D +LYAK KCEFWLKS+AFLGH++ ++ RK+ + PR S
Sbjct: 749 SHLRIVLQTLKDKELYAKFSKCEFWLKSVAFLGHIVSGDGIKVDTRKIEAVKNCPRSISP 808
Query: 1196 SEIRNFLGLACYYRRF 1243
+EIR+FLGL YYRRF
Sbjct: 809 TEIRSFLGLVGYYRRF 824
Score = 45.8 bits (107), Expect(2) = 7e-87
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = +3
Query: 3 VAKKFRIEQERLHKPFEVFTPVGESVIVRRVYRSCPV 113
VA KF + ERL +PF V TPVGES++ RVY CPV
Sbjct: 439 VANKFDVLLERLCEPFCVSTPVGESILAERVYCDCPV 475
>ref|XP_006364939.1| PREDICTED: uncharacterized protein LOC102581051 [Solanum tuberosum]
Length = 1946
Score = 291 bits (745), Expect(3) = e-166
Identities = 139/216 (64%), Positives = 168/216 (77%)
Frame = +3
Query: 1974 TRGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRN 2153
++G DG LRY+ RLC+P VDGL+EKI+E+ HNS YSIHPG TKMY +L ++YW MK++
Sbjct: 1497 SQGGDGALRYQGRLCVPCVDGLREKILEEAHNSSYSIHPGSTKMYRDLRDVYWWGGMKKD 1556
Query: 2154 IEDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIV 2333
I F+ C +CQ VKAE QRPGGL Q+I IP K E INMDF+ GLP++ IWV+V
Sbjct: 1557 IAKFVSGCHSCQQVKAEHQRPGGLTQDIEIPTWKWEEINMDFVVGLPKTRKGFGSIWVVV 1616
Query: 2334 DRLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLG 2513
DR+TKSAHFLPVKTT AEDYA+LYI ++VRLHG +SII D G QFT+HFWKSFQ+GLG
Sbjct: 1617 DRMTKSAHFLPVKTTYGAEDYARLYIHDLVRLHGIPLSIISDRGTQFTSHFWKSFQRGLG 1676
Query: 2514 TKVNLNTVFHPQTDGHKEQTI*TLEDILRACVQILK 2621
T+V L T FHPQTDG E+TI TLED+LRACV LK
Sbjct: 1677 TRVKLTTAFHPQTDGQAERTIQTLEDMLRACVLELK 1712
Score = 206 bits (525), Expect(3) = e-166
Identities = 126/286 (44%), Positives = 170/286 (59%), Gaps = 1/286 (0%)
Frame = +1
Query: 1126 GEGVKVGFQKIEAVKN*PQTYLNLRDKKFLRSGMLLQALLEGFYSILDSLIRLTQKKVKF 1305
G G+KV +K + ++N P+ + FL + + GF SI + +LTQKK KF
Sbjct: 1214 GGGIKVDPKKTDVIRNWPRPLTPSDIRSFLGLAGYYRRFVNGFSSIASPMTKLTQKKAKF 1273
Query: 1306 QWPDA*EHSFEELKMRLTFFLVLTLSEGTYGFVVYYDALGVGHECIIMQHGKVIAYASRQ 1485
+W D E SF+ LK +L +L+L +G GFVVY DA VG C++MQ+GKVIAYASRQ
Sbjct: 1274 EWTDECERSFQTLKDKLVSAPILSLPDGLEGFVVYCDASRVGLGCVLMQNGKVIAYASRQ 1333
Query: 1486 LKTYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDIFIDHKSLQYIFKQRKLNLKQNRRL 1665
LK +EKNY TH+LEL +VF LKI R+YLYGVH+D+F DHKSLQY+F Q+ LNL+Q R L
Sbjct: 1334 LKVHEKNYPTHDLELAAVVFALKIWRHYLYGVHVDVFTDHKSLQYVFTQKDLNLRQRRWL 1393
Query: 1666 E-LKKTMM*MSSIIQEK*ICS*CS*SAIDGNLSPC*RKNRTMTKEIHRLTSLEV*LLDTE 1842
E LK M + + + + G+L+ +R M +E+HRL L V L +
Sbjct: 1394 EFLKDYDMSVHYHPGKANVVADALSRVSMGSLAHVDIGDREMAREVHRLARLGVRLEEVG 1453
Query: 1843 DGDMFV*NRFESSLVAEVKEK*FNDPYLLQLKEGIHNHKTTTFKQG 1980
+G + V + SSLV EV K D LL+LK + K F QG
Sbjct: 1454 NGGVVVVDGARSSLVDEVIAKQDLDSSLLELKALVKEGKVEVFSQG 1499
Score = 140 bits (352), Expect(3) = e-166
Identities = 69/119 (57%), Positives = 92/119 (77%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
+ KG+W+D LIEF YNNSYH+SI M P +ALYG+RCRS + FEVGE LL DLV +
Sbjct: 1710 ELKGSWEDHLPLIEFSYNNSYHSSIGMAPFEALYGRRCRSSVGLFEVGEVALLGPDLVME 1769
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSP 2968
+E+V++I+E LK+A S +KSY++VR LEF+V + V++KV P+KGV+RF KKGKLSP
Sbjct: 1770 ALEEVRMIRERLKMAQSRRKSYADVRRRALEFRVGDWVYLKVSPMKGVVRFGKKGKLSP 1828
Score = 277 bits (709), Expect = 2e-71
Identities = 164/341 (48%), Positives = 219/341 (64%), Gaps = 1/341 (0%)
Frame = +2
Query: 224 RTKIVSFEFPSKPIIE*KDDAVSLIGRFVSYLKVRKMISKEYIYYLVLVRDTDTQTPTF* 403
RT+ V F+FPS+PI E + V + GRF+S +K K+ISK +Y+ V VRD +++T
Sbjct: 913 RTRRVKFQFPSEPIFEWESQNVVVKGRFISCIKAHKLISKGCLYHFVRVRDVESKTLLIE 972
Query: 404 SMPIVSEFLEVFSKDLPKVLSDREIKFRLDLLSDTKTIPISPYRMALIELKELKS-VKIS 580
S+P+V+EFL+VF DLP V +REI F +DLL DT+ I I PYR+A ELKELK +K
Sbjct: 973 SVPVVNEFLDVFPNDLPGVPLEREIDFGIDLLPDTQPIFIPPYRIAPAELKELKEQLKDL 1032
Query: 581 L**EIY*AKCLTLGCTVLFVRKKYGSIHMYIDYHQLNKVTIKNKYSLSRIDDLFEQLQGV 760
L G VLFV+KK GS+ M IDY QLN+VT+KNKY L RIDDLF+QLQG
Sbjct: 1033 LEKGFIRPSQSPWGAPVLFVKKKDGSLRMCIDYRQLNRVTVKNKYPLPRIDDLFDQLQGA 1092
Query: 761 *CYSKINIILGYHQFKVKRVDILKIAFKTRYRHFEFCVISFGLTNAPAVFY*SYEQDLQA 940
+SKI++ GYHQ KV+ DI K AF+TRY H+EF V+SFGLTNAPA+F + +
Sbjct: 1093 SHFSKIDLRSGYHQVKVRECDIPKTAFRTRYGHYEFVVMSFGLTNAPAIFMDLMNRVFKP 1152
Query: 941 LL*SFDYCVY**YSNLFS**G*SYRTSQNSIANTVQDLKLYAKNFKCEFWLKSMAFLGHL 1120
L SF V+ ++S + + +++ KLYAK KCEFWL+ +AFLGH+
Sbjct: 1153 YLDSF-VVVFIDDILIYSHSEEEHMGHLRVVLQRLREEKLYAKYEKCEFWLREVAFLGHV 1211
Query: 1121 ILEKA*RLVFRKLRQ*RISPRPTSISEIRNFLGLACYYRRF 1243
+ ++ +K R PRP + S+IR+FLGLA YYRRF
Sbjct: 1212 VSGGGIKVDPKKTDVIRNWPRPLTPSDIRSFLGLAGYYRRF 1252
Score = 65.9 bits (159), Expect = 1e-07
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = +1
Query: 2926 KGCDEI*KERKTQSRYI*PYKILRKIDQVSYELELPQDLIIVHLVFHVSMFRKCV 3090
KG K+ K RY+ PYK++R+I +V+YELELP ++ +VH VFHVSM RKCV
Sbjct: 1815 KGVVRFGKKGKLSPRYVGPYKVMRRIGKVAYELELPSEMDLVHPVFHVSMLRKCV 1869
>gb|AAT39297.2| Gag-pol protein, putative [Solanum demissum]
Length = 1554
Score = 310 bits (794), Expect(3) = e-163
Identities = 148/211 (70%), Positives = 175/211 (82%)
Frame = +3
Query: 1977 RGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRNI 2156
+G DG LRY+ RLC+P VDGL+E+IME+ H+SRYSIHPG TKMYH+L E+YW N MK+ I
Sbjct: 1153 QGGDGVLRYQGRLCVPMVDGLQERIMEEAHSSRYSIHPGSTKMYHDLREVYWWNGMKKGI 1212
Query: 2157 EDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIVD 2336
+F+ KC NCQ VK E QRP GLAQ I +P K EMINMDFI GLP+S +HD IWVIVD
Sbjct: 1213 AEFVAKCPNCQQVKVEHQRPVGLAQRIKLPEWKWEMINMDFITGLPKSHRQHDSIWVIVD 1272
Query: 2337 RLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLGT 2516
++TKSAHFLPV+TT+ AEDYAKLY+QEIVRLHG +SII D GAQFTA FWKSF+KGLG+
Sbjct: 1273 QMTKSAHFLPVRTTNIAEDYAKLYVQEIVRLHGIPISIISDRGAQFTAQFWKSFKKGLGS 1332
Query: 2517 KVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
KVNL+T F+PQTDG E+TI TLED+LRACV
Sbjct: 1333 KVNLSTAFYPQTDGQAERTIHTLEDMLRACV 1363
Score = 164 bits (415), Expect(3) = e-163
Identities = 83/131 (63%), Positives = 98/131 (74%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
DFKGNWDD LIEF YNNSYH+SI M P +ALYG+RC S I WFEVGE +L+ DLV+Q
Sbjct: 1365 DFKGNWDDHLPLIEFAYNNSYHSSIHMAPYEALYGRRCISPIGWFEVGEAQLIGPDLVHQ 1424
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSPD 2971
MEKVK+IQE LK A S QKSY +VR LEF+VD+ V++KV P+KGVMRF KKGKLSP
Sbjct: 1425 AMEKVKVIQERLKTAQSRQKSYIDVRTRALEFEVDDWVYLKVSPMKGVMRFGKKGKLSPQ 1484
Query: 2972 IFNHTRSYERL 3004
R +R+
Sbjct: 1485 YIGPYRIAKRI 1495
Score = 151 bits (382), Expect(3) = e-163
Identities = 107/285 (37%), Positives = 135/285 (47%)
Frame = +1
Query: 1126 GEGVKVGFQKIEAVKN*PQTYLNLRDKKFLRSGMLLQALLEGFYSILDSLIRLTQKKVKF 1305
G+G+KV KIEA++N P+ + FL + +EGF SI L +LTQK VKF
Sbjct: 948 GDGIKVDTGKIEAMQNWPRPTSPTEIRSFLGLAGYYRRFVEGFSSIASPLTKLTQKTVKF 1007
Query: 1306 QWPDA*EHSFEELKMRLTFFLVLTLSEGTYGFVVYYDALGVGHECIIMQHGKVIAYASRQ 1485
+W +A E SF+E K RL VLTL EGT GFVVY DA VG C++MQ+G
Sbjct: 1008 RWSEACEKSFQEFKKRLITAPVLTLPEGTQGFVVYCDASRVGLGCVLMQNG--------- 1058
Query: 1486 LKTYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDIFIDHKSLQYIFKQRKLNLKQNRRL 1665
KI R++LYGVH+DIF DHKSLQY+ Q++LNL+Q R L
Sbjct: 1059 ----------------------KIWRHHLYGVHVDIFTDHKSLQYVLTQKELNLRQRRWL 1096
Query: 1666 ELKKTMM*MSSIIQEK*ICS*CS*SAIDGNLSPC*RKNRTMTKEIHRLTSLEV*LLDTED 1845
EL K D NLS R
Sbjct: 1097 ELLK-----------------------DYNLSILYRPG---------------------- 1111
Query: 1846 GDMFV*NRFESSLVAEVKEK*FNDPYLLQLKEGIHNHKTTTFKQG 1980
+ V NR ESSLV+EVKEK DP L+ K + + F+QG
Sbjct: 1112 --IAVANRAESSLVSEVKEKQDQDPIFLEFKANVQKQRVLAFEQG 1154
Score = 340 bits (872), Expect(2) = 6e-98
Identities = 189/377 (50%), Positives = 248/377 (65%), Gaps = 1/377 (0%)
Frame = +2
Query: 116 VYHRIIITNLVELEMVDFDIIMNMDWLSSYYVSLGCRTKIVSFEFPSKPIIE*KDDAVSL 295
+ H+ + +LVEL+MVDFD+I+ M+WL + Y SL CRT++V F+FP++P+ E +
Sbjct: 611 INHKSTMADLVELDMVDFDVILGMNWLHACYASLDCRTRVVKFQFPNEPVFEWSSSSAVP 670
Query: 296 IGRFVSYLKVRKMISKEYIYYLVLVRDTDTQTPTF*SMPIVSEFLEVFSKDLPKVLSDRE 475
GRF+SYLK RK++SK IY+LV V D+ + P F S+PIV EF +VF DLP + +RE
Sbjct: 671 KGRFISYLKARKLVSKGCIYHLVRVHDSSVEIPHFQSVPIVREFPKVFPDDLPGIPPERE 730
Query: 476 IKFRLDLLSDTKTIPISPYRMALIELKELK-SVKISL**EIY*AKCLTLGCTVLFVRKKY 652
I F +DL+ DT I I PYRMA ELKELK +K L G VLFVRKK
Sbjct: 731 IDFGIDLIPDTHPISIPPYRMAPSELKELKEQLKDLLDKGFIRPSVSPWGAPVLFVRKKD 790
Query: 653 GSIHMYIDYHQLNKVTIKNKYSLSRIDDLFEQLQGV*CYSKINIILGYHQFKVKRVDILK 832
GS+ M IDY QLNKVTIKNKY L RIDDLF QLQG C+SKI++ GYHQ +V+ DI K
Sbjct: 791 GSLRMCIDYRQLNKVTIKNKYPLPRIDDLFNQLQGATCFSKIDLRSGYHQLRVRECDIPK 850
Query: 833 IAFKTRYRHFEFCVISFGLTNAPAVFY*SYEQDLQALL*SFDYCVY**YSNLFS**G*SY 1012
AF+TRY H+EF V+SFGLTNAPA F + + L +F V+ ++S +
Sbjct: 851 TAFRTRYGHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDTF-VIVFIDDILVYSRNEEDH 909
Query: 1013 RTSQNSIANTVQDLKLYAKNFKCEFWLKSMAFLGHLILEKA*RLVFRKLRQ*RISPRPTS 1192
+ ++ T++D KLYAK KCEFWLKS+AFLGH++ ++ K+ + PRPTS
Sbjct: 910 ASHLRTVLQTLKDNKLYAKFSKCEFWLKSVAFLGHIVSGDGIKVDTGKIEAMQNWPRPTS 969
Query: 1193 ISEIRNFLGLACYYRRF 1243
+EIR+FLGLA YYRRF
Sbjct: 970 PTEIRSFLGLAGYYRRF 986
Score = 47.8 bits (112), Expect(2) = 6e-98
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +3
Query: 3 VAKKFRIEQERLHKPFEVFTPVGESVIVRRVYRSCP 110
VA KF + ERL +PF V TPVGES++ RVYR CP
Sbjct: 573 VANKFDVLPERLCEPFCVSTPVGESILAERVYRDCP 608
Score = 60.8 bits (146), Expect = 3e-06
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = +1
Query: 2926 KGCDEI*KERKTQSRYI*PYKILRKIDQVSYELELPQDLIIVHLVFHVSMFRKCV 3090
KG K+ K +YI PY+I ++I V+YELELPQ+L VH VFH+SM +KC+
Sbjct: 1470 KGVMRFGKKGKLSPQYIGPYRIAKRIGNVAYELELPQELEAVHPVFHISMLKKCI 1524
>gb|EOY19264.1| Uncharacterized protein TCM_044274 [Theobroma cacao]
Length = 860
Score = 257 bits (657), Expect(4) = e-140
Identities = 121/212 (57%), Positives = 157/212 (74%)
Frame = +3
Query: 1974 TRGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRN 2153
T+G DG LRY +RL +P DGL+ +I+E+ H + Y +HPG TKMY +L E+YW +KR+
Sbjct: 445 TKGTDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRD 504
Query: 2154 IEDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIV 2333
+ +F+ KC CQ VKAE Q+P GL Q + +P K E I MDF+ GLPR+S +D IW++V
Sbjct: 505 VAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGGYDSIWIVV 564
Query: 2334 DRLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLG 2513
DRLTKSAHFLPVKTT A YA++Y+ EIVRLHG +SI+ D GAQFT+ FW Q+ LG
Sbjct: 565 DRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISIVSDRGAQFTSRFWGKLQEALG 624
Query: 2514 TKVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
TK++ +T FHPQTDG E+TI TLED+LRACV
Sbjct: 625 TKLDFSTAFHPQTDGQSERTIKTLEDMLRACV 656
Score = 181 bits (460), Expect(4) = e-140
Identities = 115/293 (39%), Positives = 171/293 (58%), Gaps = 4/293 (1%)
Frame = +1
Query: 1129 EGVKVGFQKIEAVKN*PQTYLNLRDKKFLRSGMLLQALLEGFYSILDSLIRLTQKKVKFQ 1308
EG++V +KIEAV+ P+ + F+ + ++ F I+ L +LT+K KF+
Sbjct: 163 EGIRVDTKKIEAVEKWPRPTSVTEIRSFVGLAGYYRRFVKDFSKIVAPLTKLTRKDTKFE 222
Query: 1309 WPDA*EHSFEELKMRLTFFLVLTLSEGTYGFVVYYDALGVGHECIIMQHGKVIAYASRQL 1488
W DA E+SFE+LK LT VL+L +GT G+ V+ DA GVG C++MQHGKVIAYASRQL
Sbjct: 223 WSDACENSFEKLKACLTTAPVLSLPQGTRGYTVFCDASGVGLGCVLMQHGKVIAYASRQL 282
Query: 1489 KTYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDIFIDHKSLQYIFKQRKLNLKQNRRLE 1668
K +E+NY H+LE+ +VF LKI R+YLYG +I++DHKSL+YIF+QR LNL+Q R +E
Sbjct: 283 KRHEQNYPIHDLEMAAIVFALKIWRHYLYGETCEIYMDHKSLKYIFQQRDLNLRQRRWME 342
Query: 1669 LKK----TMM*MSSIIQEK*ICS*CS*SAIDGNLSPC*RKNRTMTKEIHRLTSLEV*LLD 1836
L K T++ + + S ++ G+L+ R++ +EIH L + V L
Sbjct: 343 LLKDYDCTILYHPG--KANVVADALSRKSM-GSLAHISIGRRSLVREIHSLGDIGVRLEV 399
Query: 1837 TEDGDMFV*NRFESSLVAEVKEK*FNDPYLLQLKEGIHNHKTTTFKQGEMMVL 1995
E + R L+ ++KE D ++++ E K F +G VL
Sbjct: 400 AETSALLAHFRVRPILMDKIKEAQSKDEFVIKALEDPQGRKGKMFTKGTDGVL 452
Score = 82.4 bits (202), Expect(4) = e-140
Identities = 47/119 (39%), Positives = 61/119 (51%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
D W+ L+EF YNNS+ TSI+M +ALYG+RCRS I W EVGE +LL +LV
Sbjct: 658 DLGVKWEQYLPLVEFAYNNSFQTSIQMAAFEALYGRRCRSPIGWLEVGERKLLGPELVQD 717
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSP 2968
EK+ +I++ K+L + VMRF KKGKLSP
Sbjct: 718 ATEKIHMIRQ------------------------------KMLTAQRVMRFGKKGKLSP 746
Score = 52.0 bits (123), Expect(4) = e-140
Identities = 25/46 (54%), Positives = 31/46 (67%)
Frame = +1
Query: 2947 KERKTQSRYI*PYKILRKIDQVSYELELPQDLIIVHLVFHVSMFRK 3084
K+ K RYI P++IL K+ V+Y L LP DL +H VFHVSM RK
Sbjct: 740 KKGKLSPRYIGPFEILEKVGAVAYRLALPPDLSNIHPVFHVSMLRK 785
Score = 91.3 bits (225), Expect = 2e-15
Identities = 51/130 (39%), Positives = 81/130 (62%), Gaps = 1/130 (0%)
Frame = +2
Query: 308 VSYLKVRKMISKEYIYYLVLVRDTDTQTPTF*SMPIVSEFLEVFSKDLPKVLSDREIKFR 487
+S + R+++ + I YL +V+D+ + + +V EF++VF ++LP + +RE++F
Sbjct: 16 ISVISARRLLRQGCIGYLAVVKDSQAKIGDVTQVSVVKEFVDVFPEELPGLPPEREVEFC 75
Query: 488 LDLLSDTKTIPISPYRMALIELKELKSVKISL**EIY*AKCLT-LGCTVLFVRKKYGSIH 664
+DL+ DT+ I I PYRMA ELKELK L + + ++ G VLFV+KK GS+
Sbjct: 76 IDLIPDTRPISIPPYRMAPAELKELKDQLEDLLDKGFIRPSVSPWGAPVLFVKKKDGSLR 135
Query: 665 MYIDYHQLNK 694
+ IDY QLNK
Sbjct: 136 LCIDYRQLNK 145
Score = 70.1 bits (170), Expect = 6e-09
Identities = 33/65 (50%), Positives = 48/65 (73%)
Frame = +2
Query: 1061 YAKNFKCEFWLKSMAFLGHLILEKA*RLVFRKLRQ*RISPRPTSISEIRNFLGLACYYRR 1240
Y + KCEFWL+S+AFLGH++ ++ R+ +K+ PRPTS++EIR+F+GLA YYRR
Sbjct: 140 YRQLNKCEFWLESVAFLGHVVSKEGIRVDTKKIEAVEKWPRPTSVTEIRSFVGLAGYYRR 199
Query: 1241 F*RVF 1255
F + F
Sbjct: 200 FVKDF 204
>gb|EOY08678.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 666
Score = 256 bits (653), Expect(4) = e-136
Identities = 121/212 (57%), Positives = 156/212 (73%)
Frame = +3
Query: 1974 TRGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRN 2153
T+G DG LRY +RL +P DGL+ KI+E+ H + Y +HPG TKMY +L E+YW +KR+
Sbjct: 328 TKGTDGVLRYGTRLYVPDGDGLRRKILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRD 387
Query: 2154 IEDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIV 2333
+ +F+ KC CQ VKAE Q+P GL Q + +P K E I MDF+ GLPR+S +D IW++V
Sbjct: 388 VAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGGYDSIWIVV 447
Query: 2334 DRLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLG 2513
DRLTKSAHFL VKTT A YA++Y+ EIVRLHG +SI+ D GAQFT+ FW Q+ LG
Sbjct: 448 DRLTKSAHFLSVKTTYGAAQYARVYVDEIVRLHGIPISIVSDRGAQFTSRFWGKLQEALG 507
Query: 2514 TKVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
TK++ +T FHPQTDG E+TI TLED+LRACV
Sbjct: 508 TKLDFSTTFHPQTDGQSERTIQTLEDMLRACV 539
Score = 182 bits (462), Expect(4) = e-136
Identities = 116/293 (39%), Positives = 170/293 (58%), Gaps = 4/293 (1%)
Frame = +1
Query: 1129 EGVKVGFQKIEAVKN*PQTYLNLRDKKFLRSGMLLQALLEGFYSILDSLIRLTQKKVKFQ 1308
EG++V +KIEAV+ P+ + F+ + ++ F I+ L +LT+K KF+
Sbjct: 46 EGIRVDTKKIEAVEKWPRPTSVTEIRSFVGLAGYYRRFVKDFSKIVAPLTKLTRKDTKFE 105
Query: 1309 WPDA*EHSFEELKMRLTFFLVLTLSEGTYGFVVYYDALGVGHECIIMQHGKVIAYASRQL 1488
W DA E+SFE+LK LT VL+L +GT G+ V+ DA GVG C++MQHGKVIAYASRQL
Sbjct: 106 WSDACENSFEKLKACLTTAPVLSLPQGTGGYTVFCDASGVGLGCVLMQHGKVIAYASRQL 165
Query: 1489 KTYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDIFIDHKSLQYIFKQRKLNLKQNRRLE 1668
K +E+NY HNLE+ +VF LKI R+YLYG +I+ DHKSL+YIF+QR LNL+Q R +E
Sbjct: 166 KRHEQNYPIHNLEMAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRDLNLRQRRWME 225
Query: 1669 LKK----TMM*MSSIIQEK*ICS*CS*SAIDGNLSPC*RKNRTMTKEIHRLTSLEV*LLD 1836
L K T++ + + S ++ G+L+ R++ +EIH L + V L
Sbjct: 226 LLKDYDCTILYHPG--KANVVADALSRKSM-GSLAHISIGRRSLVREIHSLGDIGVRLEV 282
Query: 1837 TEDGDMFV*NRFESSLVAEVKEK*FNDPYLLQLKEGIHNHKTTTFKQGEMMVL 1995
E + R L+ ++KE D ++++ E K F +G VL
Sbjct: 283 AETNALLAHFRVRPILMDKIKEAQSKDEFVIKALEDPQGRKGKMFTKGTDGVL 335
Score = 97.8 bits (242), Expect(4) = e-136
Identities = 48/94 (51%), Positives = 63/94 (67%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
D W+ L+EF YNNS+ TSI+M P +ALYG+RCRS I W EVGE +LL +LV
Sbjct: 541 DLGVKWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQD 600
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQV 2893
EK+ +I++ + A S QKSY++ R DLEFQV
Sbjct: 601 ATEKIHMIRQKMLTAQSRQKSYADNRRRDLEFQV 634
Score = 21.9 bits (45), Expect(4) = e-136
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 996 SEVDHIEHLRIVLQTL 1043
S +H +HL+IVLQ L
Sbjct: 2 SREEHEQHLKIVLQIL 17
Score = 77.0 bits (188), Expect = 5e-11
Identities = 36/75 (48%), Positives = 55/75 (73%)
Frame = +2
Query: 1031 IANTVQDLKLYAKNFKCEFWLKSMAFLGHLILEKA*RLVFRKLRQ*RISPRPTSISEIRN 1210
+ +++ +LYAK KCEFWL+S+AFLGH++ ++ R+ +K+ PRPTS++EIR+
Sbjct: 13 VLQILREHRLYAKFSKCEFWLESVAFLGHVVSKEGIRVDTKKIEAVEKWPRPTSVTEIRS 72
Query: 1211 FLGLACYYRRF*RVF 1255
F+GLA YYRRF + F
Sbjct: 73 FVGLAGYYRRFVKDF 87
>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
Length = 1152
Score = 240 bits (612), Expect(3) = e-131
Identities = 114/208 (54%), Positives = 147/208 (70%)
Frame = +3
Query: 1986 DGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRNIEDF 2165
+G L Y RLC+P VDGL++++M++ H +++HPG TKMY +L E YW MK NI +F
Sbjct: 699 NGHLWYGDRLCVPDVDGLRQQVMDEAHKIAFAVHPGSTKMYRDLKERYWWLGMKLNIAEF 758
Query: 2166 IDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIVDRLT 2345
+ KC CQ VKAE +RPGGL + + +P K E I MDFI GLPR+ HD+IWVIVDRLT
Sbjct: 759 VAKCDTCQRVKAEHRRPGGLLKPLEVPEWKWENITMDFITGLPRTKSGHDMIWVIVDRLT 818
Query: 2346 KSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLGTKVN 2525
KSAHFLP K + + +LY+ IVRLHG +SI+ D ++F +HFWK QK TK +
Sbjct: 819 KSAHFLPCKVDMPIKKFTQLYLDNIVRLHGVPLSIVSDRDSRFISHFWKGLQKAFETKTD 878
Query: 2526 LNTVFHPQTDGHKEQTI*TLEDILRACV 2609
L+T FHPQTDG E+TI TLED+LRACV
Sbjct: 879 LSTAFHPQTDGQSERTIQTLEDMLRACV 906
Score = 160 bits (404), Expect(3) = e-131
Identities = 107/284 (37%), Positives = 148/284 (52%), Gaps = 1/284 (0%)
Frame = +1
Query: 1126 GEGVKVGFQKIEAVKN*PQTYLNLRDKKFLRSGMLLQALLEGFYSILDSLIRLTQKKVKF 1305
G+G++V KIEAV P+ + FL + ++ F I L RLTQK +KF
Sbjct: 418 GDGIQVDPAKIEAVSKWPRPTTVTEIRSFLGLAGYYRKFVQDFSKIATPLTRLTQKNIKF 477
Query: 1306 QWPDA*EHSFEELKMRLTFFLVLTLSEGTYGFVVYYDALGVGHECIIMQHGKVIAYASRQ 1485
+W E +F+ LK +LT VL L E + VY DA G G C++MQ GKVIAYASRQ
Sbjct: 478 EWSKECEEAFQTLKDKLTVAPVLALPEVFDNYDVYTDASGQGLGCVLMQAGKVIAYASRQ 537
Query: 1486 LKTYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDIFIDHKSLQYIFKQRKLNLKQNRRL 1665
LK +EKNY TH+LEL +VF LK R+YLYGV IF DHKSL++ F Q LN++Q R L
Sbjct: 538 LKVHEKNYPTHDLELAAVVFALKQWRHYLYGVKARIFTDHKSLKFFFTQENLNMRQRRWL 597
Query: 1666 ELKKTMM*MSSIIQEK*ICS*CS*SAIDGNLSPC*RKNRTMTKEIHRLTSLEV*LLDTE- 1842
E K K + D T+ + IH+L SL++ +++ E
Sbjct: 598 EFVKDYDLDIQYHPGK------ANVVADALSRRPVNAITTLQEVIHQLDSLQIQVVEREG 651
Query: 1843 DGDMFV*NRFESSLVAEVKEK*FNDPYLLQLKEGIHNHKTTTFK 1974
+ F S L+ +++ K DP L+ LK T ++
Sbjct: 652 EAQCFAPLMARSELLDDIRAKQDEDPVLVDLKRVAREKPTVGYQ 695
Score = 121 bits (303), Expect(3) = e-131
Identities = 58/116 (50%), Positives = 83/116 (71%)
Frame = +2
Query: 2621 GNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQVME 2800
G+WDD ++ EF YNNSYH S+ M P +ALYG++CR+ + W EVGE + +LV Q E
Sbjct: 911 GSWDDFLSVAEFAYNNSYHASLGMPPFEALYGRKCRTPLYWDEVGEKQYTGPELVEQAKE 970
Query: 2801 KVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSP 2968
KV+LI+++LK A QKS++++R LEF V + V+++ P+KGV RF +KGKLSP
Sbjct: 971 KVELIRKNLKAAQDRQKSWADIRRRPLEFAVGDRVYLRASPMKGVKRFGQKGKLSP 1026
Score = 248 bits (632), Expect(2) = 1e-63
Identities = 151/373 (40%), Positives = 210/373 (56%), Gaps = 4/373 (1%)
Frame = +2
Query: 137 TNLVELEMVDFDIIMNMDWLSSYYVSLGCRTKIVSFEFPSKPIIE*KDDAVSLIGR---F 307
++L L+ +FD+I+ MDWLS +V + CR K V F P K + + +
Sbjct: 85 SDLTVLDFTNFDVILGMDWLSKNFVHVDCRGKKVIFRVPGKSDKTFQGNVYKASKKKYPI 144
Query: 308 VSYLKVRKMISKEYIYYLVLVRDTDTQTPTF*SMPIVSEFLEVFSKDLPKVLSDREIKFR 487
+S ++ K + K Y++ DT+ TP IV +F EVF +LP + DR+I+F
Sbjct: 145 ISAVRAMKALQKGCEGYVLYAMDTEKHTPKLEETSIVKDFPEVFPDELPGNMPDRDIEFE 204
Query: 488 LDLLSDTKTIPISPYRMALIELKELK-SVKISL**EIY*AKCLTLGCTVLFVRKKYGSIH 664
+ L+ +PYRMA ELKELK +K L + G VLFV+KK GS+
Sbjct: 205 IQLIPGAAPTAKAPYRMAPAELKELKIQLKDMLERNVIQPSTSPWGAPVLFVKKKDGSLR 264
Query: 665 MYIDYHQLNKVTIKNKYSLSRIDDLFEQLQGV*CYSKINIILGYHQFKVKRVDILKIAFK 844
M IDY LN +TIKNKY L RIDDLF QLQG +SKI++ GYHQ K+K D K AF
Sbjct: 265 MCIDYRALNNLTIKNKYPLPRIDDLFNQLQGKKVFSKIDLRSGYHQLKIKVADRPKTAFS 324
Query: 845 TRYRHFEFCVISFGLTNAPAVFY*SYEQDLQALL*SFDYCVY**YSNLFS**G*SYRTSQ 1024
TRY H+EF V+ FGLTNAP+ F ++ L F V+ ++S +
Sbjct: 325 TRYGHYEFLVMPFGLTNAPSAFMDLMQRVFMPYLDKF-VVVFIDDILIYSKDEKEHEEHL 383
Query: 1025 NSIANTVQDLKLYAKNFKCEFWLKSMAFLGHLILEKA*RLVFRKLRQ*RISPRPTSISEI 1204
+ T+++ KLYAK KCEFWLK ++FLGH+I ++ K+ PRPT+++EI
Sbjct: 384 RIVLQTLKEKKLYAKFSKCEFWLKQVSFLGHVISGDGIQVDPAKIEAVSKWPRPTTVTEI 443
Query: 1205 RNFLGLACYYRRF 1243
R+FLGLA YYR+F
Sbjct: 444 RSFLGLAGYYRKF 456
Score = 25.4 bits (54), Expect(2) = 1e-63
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 3 VAKKFRIEQERLHKPFEVFTPVGESVIVRRV 95
+A+K + + L KP + TP+G V +V
Sbjct: 40 IARKLNLPLQELEKPLSITTPLGRVTKVAQV 70
>gb|EOY14099.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1502
Score = 216 bits (550), Expect(3) = e-128
Identities = 109/214 (50%), Positives = 142/214 (66%), Gaps = 2/214 (0%)
Frame = +3
Query: 1974 TRGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRN 2153
T+G DG LRY +RL +P DGL+ +I+E+ H + Y +HPG TKMY +L E+YW +KR+
Sbjct: 1126 TKGTDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRD 1185
Query: 2154 IEDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*--K*EMINMDFIAGLPRSS*RHDLIWV 2327
+ +F +PV K E I MDF+ GLPR+S +D IW+
Sbjct: 1186 VAEF------------------------PLPVLEWKWEHIAMDFVTGLPRTSGGYDSIWI 1221
Query: 2328 IVDRLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKG 2507
+VDRLTKSAHFLPVKTT A YA++Y+ EIVRLHG +SI+ D GAQFT+ FW Q+
Sbjct: 1222 VVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISIVSDRGAQFTSRFWGKLQEA 1281
Query: 2508 LGTKVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
LGTK++ +T FHPQTDG E+TI TLED+LRACV
Sbjct: 1282 LGTKLDFSTAFHPQTDGQSERTIQTLEDMLRACV 1315
Score = 179 bits (454), Expect(3) = e-128
Identities = 115/293 (39%), Positives = 169/293 (57%), Gaps = 4/293 (1%)
Frame = +1
Query: 1129 EGVKVGFQKIEAVKN*PQTYLNLRDKKFLRSGMLLQALLEGFYSILDSLIRLTQKKVKFQ 1308
EG++V +KIEAV+ P+ + F+ + ++ F I+ L +LT+K KF+
Sbjct: 844 EGIQVDTKKIEAVEKWPRPTSVTEIRSFVGLAGYYRRFVKDFSKIVAPLTKLTRKDTKFE 903
Query: 1309 WPDA*EHSFEELKMRLTFFLVLTLSEGTYGFVVYYDALGVGHECIIMQHGKVIAYASRQL 1488
W DA E+SFE+LK LT VL+L +GT G++V+ DA GVG C++MQHGKVIAYASRQL
Sbjct: 904 WSDACENSFEKLKACLTTAPVLSLPQGTGGYMVFCDASGVGLGCVLMQHGKVIAYASRQL 963
Query: 1489 KTYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDIFIDHKSLQYIFKQRKLNLKQNRRLE 1668
K +E NY H+LE+ +VF LKI R+YLYG +I+ DHKSL+YIF+QR LNL+Q R +E
Sbjct: 964 KRHEHNYPIHDLEMAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRDLNLRQRRWME 1023
Query: 1669 LKK----TMM*MSSIIQEK*ICS*CS*SAIDGNLSPC*RKNRTMTKEIHRLTSLEV*LLD 1836
L K T++ + + S ++ G+L+ R++ +EIH L + V L
Sbjct: 1024 LLKDYDCTILYHPG--KANVVADALSRKSM-GSLAHISIGRRSLVREIHSLGDIGVRLEV 1080
Query: 1837 TEDGDMFV*NRFESSLVAEVKEK*FNDPYLLQLKEGIHNHKTTTFKQGEMMVL 1995
E + R L+ +KE D ++++ E K F +G VL
Sbjct: 1081 AETNALLAHFRVRPILMDRIKEAQSKDEFVIKALEDPQGRKGKMFTKGTDGVL 1133
Score = 116 bits (291), Expect(3) = e-128
Identities = 63/131 (48%), Positives = 84/131 (64%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
D W+ L+EF YNNS+ TSI+M P +ALYG+RCRS I W EVGE +LL +L+
Sbjct: 1317 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELMQD 1376
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSPD 2971
EK+ +I++ + A S QKSY++ R DLEFQV + VF+KV P KGVMR K +PD
Sbjct: 1377 ATEKIHMIRQRMLTAQSRQKSYADNRRRDLEFQVGDHVFLKVSPTKGVMR-----KYNPD 1431
Query: 2972 IFNHTRSYERL 3004
+H YE +
Sbjct: 1432 P-SHVIRYETI 1441
Score = 247 bits (630), Expect = 3e-62
Identities = 151/373 (40%), Positives = 214/373 (57%), Gaps = 1/373 (0%)
Frame = +2
Query: 140 NLVELEMVDFDIIMNMDWLSSYYVSLGCRTKIVSFEFPSKPIIE*KDDAVSLIGRFVSYL 319
NLV L+ +DFD+I+ MDWLS + S+ C K+V IG
Sbjct: 563 NLVVLDTLDFDVILGMDWLSPCHASVDCYHKLVK------------------IGDVTQ-- 602
Query: 320 KVRKMISKEYIYYLVLVRDTDTQTPTF*SMPIVSEFLEVFSKDLPKVLSDREIKFRLDLL 499
+ +V EF++VF ++LP + +REI+F +DL+
Sbjct: 603 -----------------------------VSVVKEFVDVFPEELPGLPPEREIEFCIDLI 633
Query: 500 SDTKTIPISPYRMALIELKELKSVKISL**EIY*AKCLT-LGCTVLFVRKKYGSIHMYID 676
DT+ I I PYRMA ELKELK L + + ++ G VLFV+KK GS+ + ID
Sbjct: 634 PDTRPISIPPYRMAPAELKELKDQLEDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCID 693
Query: 677 YHQLNKVTIKNKYSLSRIDDLFEQLQGV*CYSKINIILGYHQFKVKRVDILKIAFKTRYR 856
Y QLNKVT+KNKY L RIDDLF+QLQG C+SKI++ GYHQ +++ DI KIAF+TRY
Sbjct: 694 YRQLNKVTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIRNEDIPKIAFQTRYG 753
Query: 857 HFEFCVISFGLTNAPAVFY*SYEQDLQALL*SFDYCVY**YSNLFS**G*SYRTSQNSIA 1036
H+EF V+SFGLTNAPA F + + L F V+ ++S + +
Sbjct: 754 HYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDKF-VVVFIDDILIYSKSREEHEQHLKIVL 812
Query: 1037 NTVQDLKLYAKNFKCEFWLKSMAFLGHLILEKA*RLVFRKLRQ*RISPRPTSISEIRNFL 1216
+++ +LYAK KCEFWL+S+AFLGH++ ++ ++ +K+ PRPTS++EIR+F+
Sbjct: 813 QILREHRLYAKFSKCEFWLESVAFLGHVVSKEGIQVDTKKIEAVEKWPRPTSVTEIRSFV 872
Query: 1217 GLACYYRRF*RVF 1255
GLA YYRRF + F
Sbjct: 873 GLAGYYRRFVKDF 885
>gb|EOY03078.1| Retrotransposon protein, putative [Theobroma cacao]
Length = 1263
Score = 202 bits (513), Expect(3) = e-127
Identities = 103/212 (48%), Positives = 137/212 (64%)
Frame = +3
Query: 1974 TRGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRN 2153
T+G DG LRY +RL +P DGL+ +I+E+ H + Y +HPG TKMY +L E+YW +KR+
Sbjct: 843 TKGTDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRD 902
Query: 2154 IEDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIV 2333
+ +F+ KC CQ VKAE Q+ L Q + +P K E I MDF+ GLPR++ +D IW++V
Sbjct: 903 VAEFVSKCLVCQQVKAEHQKLTRLLQPLPVPKWKWEHIAMDFVTGLPRTNGGYDSIWIVV 962
Query: 2334 DRLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLG 2513
DRLTKSAHFLPVK T A YA++Y+ EI+ Q+ LG
Sbjct: 963 DRLTKSAHFLPVKITYGAAQYARVYVDEIL-------------------------QEPLG 997
Query: 2514 TKVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
TK++ +T FHPQTDG EQTI TLED+LRACV
Sbjct: 998 TKLDFSTTFHPQTDGQSEQTIQTLEDMLRACV 1029
Score = 175 bits (444), Expect(3) = e-127
Identities = 114/293 (38%), Positives = 167/293 (56%), Gaps = 4/293 (1%)
Frame = +1
Query: 1129 EGVKVGFQKIEAVKN*PQTYLNLRDKKFLRSGMLLQALLEGFYSILDSLIRLTQKKVKFQ 1308
+G++V +KIEAV+ P+ + F+ + ++ F I+ L +LT K KF+
Sbjct: 561 DGIQVDSKKIEAVEKWPRPTSVTEIRSFVGLAGYYRRFVKDFSKIVAPLTKLTCKDAKFE 620
Query: 1309 WPDA*EHSFEELKMRLTFFLVLTLSEGTYGFVVYYDALGVGHECIIMQHGKVIAYASRQL 1488
W DA E+SFE+LK LT VL+L +GT G++V+ DA VG C++MQHGKVIAYAS QL
Sbjct: 621 WSDAYENSFEKLKACLTIAPVLSLPQGTRGYMVFCDASRVGLGCVLMQHGKVIAYASSQL 680
Query: 1489 KTYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDIFIDHKSLQYIFKQRKLNLKQNRRLE 1668
K +E+NY HNLE+ +VF LKI R+YLYG +I+ DHKSL+YIF+QR LNL+Q R +E
Sbjct: 681 KRHEQNYPIHNLEIAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRDLNLRQRRWME 740
Query: 1669 LKK----TMM*MSSIIQEK*ICS*CS*SAIDGNLSPC*RKNRTMTKEIHRLTSLEV*LLD 1836
L K T++ + + S ++ G+L+ R++ KEIH L + V L
Sbjct: 741 LLKDYDCTILYHPG--KANVVADAFSRKSM-GSLAHISTGRRSLVKEIHSLGDIGVHLEV 797
Query: 1837 TEDGDMFV*NRFESSLVAEVKEK*FNDPYLLQLKEGIHNHKTTTFKQGEMMVL 1995
E + R L+ ++KE D ++ + E K F +G VL
Sbjct: 798 AETNALLAHFRVRPILMDKIKEAQSKDEFVTKAIEDPQGRKGKMFTKGTDGVL 850
Score = 129 bits (325), Expect(3) = e-127
Identities = 70/140 (50%), Positives = 89/140 (63%), Gaps = 2/140 (1%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
D W+ L+EF YNNS+ TSI+M P +ALYG+RCRS I W EVGE +LL LV
Sbjct: 1031 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPKLVQD 1090
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSPD 2971
EK+ +I++ + A S QKSY + R DLEFQV + VF+KV P KGVMRF KKGKLSP
Sbjct: 1091 ATEKIHMIRQRMLTAQSRQKSYVDNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSPR 1150
Query: 2972 IFNHTRSYERL--IKYLMSL 3025
ER+ + Y ++L
Sbjct: 1151 YIGPFEILERVGEVAYRLAL 1170
Score = 251 bits (642), Expect = 1e-63
Identities = 145/374 (38%), Positives = 220/374 (58%), Gaps = 2/374 (0%)
Frame = +2
Query: 140 NLVELEMVDFDIIMNMDWLSSYYVSLGCRTKIVSFEFPSKPIIE*KDDAVSLIGRFVSYL 319
NLV L+ +DFD+I+ MDWLS + S+ C K+V F+FP +P + D + +S +
Sbjct: 262 NLVVLDTLDFDVILGMDWLSPCHASVDCYHKLVRFDFPGEPSFSIQGDRSNAPTNLISVI 321
Query: 320 KVRKMISKEYIYYLVLVRDTDTQTPTF*SMPIVSEFLEVFSKDLPKVLSDREIKFRLDLL 499
R+++ ++ + YL +V+DT + + +V EF++VF ++LP++ +E+K +L+ L
Sbjct: 322 SARRLLRQDCVGYLAVVKDTQAKIGDVTQVSVVKEFVDVFPEELPEL---KELKDQLEDL 378
Query: 500 SDTKTI--PISPYRMALIELKELKSVKISL**EIY*AKCLTLGCTVLFVRKKYGSIHMYI 673
D I +SP+ G VLFV+KK GS+ + I
Sbjct: 379 LDKGFIRPSVSPW-----------------------------GAPVLFVKKKDGSLRLCI 409
Query: 674 DYHQLNKVTIKNKYSLSRIDDLFEQLQGV*CYSKINIILGYHQFKVKRVDILKIAFKTRY 853
DY QLNKVT+KNKY L RIDDLF+QLQ C+SKI++ GYHQ +++ DI K AF+TRY
Sbjct: 410 DYRQLNKVTVKNKYPLPRIDDLFDQLQRAQCFSKIDLRSGYHQLRIRNEDIPKTAFRTRY 469
Query: 854 RHFEFCVISFGLTNAPAVFY*SYEQDLQALL*SFDYCVY**YSNLFS**G*SYRTSQNSI 1033
H+EF V+SFGLTNAPA F + + L F V+ ++S + +
Sbjct: 470 GHYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDKF-MVVFIDDILIYSKSRKEHEQHLKIV 528
Query: 1034 ANTVQDLKLYAKNFKCEFWLKSMAFLGHLILEKA*RLVFRKLRQ*RISPRPTSISEIRNF 1213
+++ +LYAK KCEFWL+S+AFLGH++ + ++ +K+ PRPTS++EIR+F
Sbjct: 529 LQILKEHQLYAKFSKCEFWLESVAFLGHVVSKDGIQVDSKKIEAVEKWPRPTSVTEIRSF 588
Query: 1214 LGLACYYRRF*RVF 1255
+GLA YYRRF + F
Sbjct: 589 VGLAGYYRRFVKDF 602
>gb|EOY21478.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 878
Score = 257 bits (657), Expect(4) = e-125
Identities = 121/212 (57%), Positives = 157/212 (74%)
Frame = +3
Query: 1974 TRGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRN 2153
T+G DG LRY +RL +P DGL+ +I+E+ H + Y +HPG TKMY +L E+YW +KR+
Sbjct: 611 TKGTDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRD 670
Query: 2154 IEDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIV 2333
+ +F+ KC CQ VKAE Q+P GL Q + +P K E I MDF+ GLPR+S +D IW++V
Sbjct: 671 VAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGGYDSIWIVV 730
Query: 2334 DRLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLG 2513
DRLTKSAHFLPVKTT A YA++Y+ EIVRLHG +SI+ D GAQFT+ FW Q+ LG
Sbjct: 731 DRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISIVSDRGAQFTSRFWGKLQEALG 790
Query: 2514 TKVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
TK++ +T FHPQTDG E+TI TLED+LRACV
Sbjct: 791 TKLDFSTAFHPQTDGQSERTIQTLEDMLRACV 822
Score = 167 bits (423), Expect(4) = e-125
Identities = 105/255 (41%), Positives = 151/255 (59%), Gaps = 4/255 (1%)
Frame = +1
Query: 1243 LEGFYSILDSLIRLTQKKVKFQWPDA*EHSFEELKMRLTFFLVLTLSEGTYGFVVYYDAL 1422
++ F I+ L +LT+K KF+W DA E+SFE+LK LT VL+L +GT G+ V+ DA
Sbjct: 367 VKDFSKIVAPLTKLTRKDTKFEWSDACENSFEKLKACLTTAPVLSLPQGTGGYTVFCDAS 426
Query: 1423 GVGHECIIMQHGKVIAYASRQLKTYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDIFID 1602
GVG C++MQHGKVIAYASRQLK +E+NY H+LE+ +VF LKI R+YLYG +I+ D
Sbjct: 427 GVGLGCVLMQHGKVIAYASRQLKRHEQNYPIHDLEMAAIVFALKIWRHYLYGETCEIYTD 486
Query: 1603 HKSLQYIFKQRKLNLKQNRRLELKK----TMM*MSSIIQEK*ICS*CS*SAIDGNLSPC* 1770
HKSL+YIF+QR LNL+Q R +EL K T++ + + S ++ G+L+
Sbjct: 487 HKSLKYIFQQRDLNLRQRRWMELLKDYDCTILYHPG--KANVVADALSRKSM-GSLAHIF 543
Query: 1771 RKNRTMTKEIHRLTSLEV*LLDTEDGDMFV*NRFESSLVAEVKEK*FNDPYLLQLKEGIH 1950
R++ +EIH L + V L E + R L+ +KE D ++++ E
Sbjct: 544 IGRRSLVREIHSLGDIGVRLEVAETNALLAHFRVRPILMDRIKEAQSKDEFVIKALEDPQ 603
Query: 1951 NHKTTTFKQGEMMVL 1995
K F +G VL
Sbjct: 604 GRKGKMFTKGTDGVL 618
Score = 61.6 bits (148), Expect(4) = e-125
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELL 2770
D W+ L+EF YNNS+ TSI+M P +ALYG+RCRS I W E G+ + L
Sbjct: 824 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEGGKKKPL 876
Score = 37.4 bits (85), Expect(4) = e-125
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +2
Query: 1175 SPRPTSISEIRNFLGLACYYRRF*RVF 1255
S PTS++EIR+F+GLA YYRRF + F
Sbjct: 344 SAPPTSVTEIRSFVGLAGYYRRFVKDF 370
>gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 679
Score = 255 bits (652), Expect(3) = e-123
Identities = 120/212 (56%), Positives = 157/212 (74%)
Frame = +3
Query: 1974 TRGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRN 2153
T+G DG LRY +RL +P DGL+ +I+E+ H + Y +HPG TKMY +L E+YW +KR+
Sbjct: 234 TKGTDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRD 293
Query: 2154 IEDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIV 2333
+ +F+ KC CQ VKAE Q+P GL Q + +P K E I MDF+ GLPR+S +D IW++V
Sbjct: 294 VAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGGYDSIWIVV 353
Query: 2334 DRLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLG 2513
D+LTKSAHFLPVKTT A YA++Y+ EIVRLHG +SI+ D GAQFT+ FW Q+ LG
Sbjct: 354 DQLTKSAHFLPVKTTYGAAHYARVYVDEIVRLHGIPISIVSDRGAQFTSRFWGKLQEALG 413
Query: 2514 TKVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
TK++ +T FHPQTDG E+TI TLED+LRACV
Sbjct: 414 TKLDFSTAFHPQTDGQSERTIQTLEDMLRACV 445
Score = 129 bits (325), Expect(3) = e-123
Identities = 68/140 (48%), Positives = 91/140 (65%), Gaps = 2/140 (1%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
D W+ L+EF YNNS+ TSI+M P +ALYG+RCRS I W EVGE +LL +LV
Sbjct: 447 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQD 506
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSPD 2971
EK+ +I++ + A S QKSY++ R DLEFQV + VF+K P KGVMRF KKGKLSP
Sbjct: 507 ATEKIHMIRQRMLTAQSRQKSYADNRRRDLEFQVGDHVFLKFSPTKGVMRFGKKGKLSPR 566
Query: 2972 IFNHTRSYERL--IKYLMSL 3025
+ E++ + Y ++L
Sbjct: 567 YIGPFKILEKVGAVAYRLAL 586
Score = 107 bits (267), Expect(3) = e-123
Identities = 76/198 (38%), Positives = 111/198 (56%), Gaps = 4/198 (2%)
Frame = +1
Query: 1414 DALGVGHECIIMQHGKVIAYASRQLKTYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDI 1593
+AL VG ++MQHGKVIAYASRQLK +E+NY +LE+ V+VF LKI R+YLYG +I
Sbjct: 49 EALWVGG--VLMQHGKVIAYASRQLKRHEQNYPILDLEMAVIVFALKIWRHYLYGETCEI 106
Query: 1594 FIDHKSLQYIFKQRKLNLKQNRRLELKK----TMM*MSSIIQEK*ICS*CS*SAIDGNLS 1761
+ DHKSL+YIF+QR NL+Q R +EL K T++ + + S ++ G+L+
Sbjct: 107 YTDHKSLKYIFQQRDFNLRQRRWMELLKDYDCTILYHPG--KANVVADALSRKSM-GSLA 163
Query: 1762 PC*RKNRTMTKEIHRLTSLEV*LLDTEDGDMFV*NRFESSLVAEVKEK*FNDPYLLQLKE 1941
R++ +EIH L + V L E + R L+ +KE D ++++ E
Sbjct: 164 HISIGRRSLVREIHSLGDIGVRLEVAETNALLAHFRVRPILMDRIKEAQSKDEFVIKALE 223
Query: 1942 GIHNHKTTTFKQGEMMVL 1995
K F +G VL
Sbjct: 224 DPRGRKGKMFTKGTDGVL 241
>gb|ABA95392.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 785
Score = 192 bits (487), Expect(5) = e-122
Identities = 116/318 (36%), Positives = 174/318 (54%), Gaps = 6/318 (1%)
Frame = +3
Query: 1674 KDYDVDVLYHSRKINM*LMLLVGDRWES*PMLKKK*NHDEGNSPINQ------FRSLTFG 1835
KDYD+ + YH K N+ V D L +K +H + +NQ F+ L
Sbjct: 247 KDYDLGIHYHPGKANV-----VADA------LSRKLHHITASFLVNQPELHEEFQKLNLE 295
Query: 1836 YRRW*YVCLEQVRILLSSRSEGEIV**SLFIATEGRYPQS*DYNF*TRGDDGTLRYRSRL 2015
++ ++ L S+ + + + + + NF ++ +G + + ++
Sbjct: 296 VVEDGFIAALALQPTLQSQIKAAQLTDKRVAKIKTQIKEGLTSNF-SQSPNGIILHGKQI 354
Query: 2016 CIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRNIEDFIDKCSNCQ*V 2195
+P ++E I+++ H S SIHPG TKMY +L YW M+R+I ++ C CQ +
Sbjct: 355 YVPDDLQIRELILKEAHESPLSIHPGCTKMYQDLRTRYWWPSMRRDIAAYVAICDVCQRI 414
Query: 2196 KAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIVDRLTKSAHFLPVKT 2375
KAE QR GL Q + +P K + + MDFI GLP++ HD IWVIVDRLTK AHF+PV
Sbjct: 415 KAEHQRLAGLLQPLQVPEWKFDEVGMDFITGLPKTPHGHDSIWVIVDRLTKVAHFIPVHM 474
Query: 2376 TDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLGTKVNLNTVFHPQTD 2555
T + A+LY+ I+RLHG +I+ D G QFT+ FW++ LGT++ +T FHPQT
Sbjct: 475 TYNGAKLAELYMTHIIRLHGVPKAIVSDRGPQFTSRFWENLHDLLGTELFFSTAFHPQTG 534
Query: 2556 GHKEQTI*TLEDILRACV 2609
G E+T LED+LRACV
Sbjct: 535 GQTERTNQILEDMLRACV 552
Score = 139 bits (350), Expect(5) = e-122
Identities = 81/182 (44%), Positives = 107/182 (58%)
Frame = +1
Query: 1132 GVKVGFQKIEAVKN*PQTYLNLRDKKFLRSGMLLQALLEGFYSILDSLIRLTQKKVKFQW 1311
GV V ++ V N Q + FL + +E F I + +L +K+ KF+W
Sbjct: 66 GVAVNPSNVQNVLNGKQPQSVPEVRSFLGLAGYYRRFIENFSRIARPMTQLLKKEQKFEW 125
Query: 1312 PDA*EHSFEELKMRLTFFLVLTLSEGTYGFVVYYDALGVGHECIIMQHGKVIAYASRQLK 1491
A E SF+ELK RLT VL + + GF +Y DA G C++MQ GKV+AYASRQL+
Sbjct: 126 STACEASFQELKRRLTTAPVLVMPDTRKGFDIYCDASHHGLGCVLMQDGKVVAYASRQLR 185
Query: 1492 TYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDIFIDHKSLQYIFKQRKLNLKQNRRLEL 1671
+E NY TH+LEL +V LKI R+YL G +I+ DHKSL+Y F Q LNL+Q R LEL
Sbjct: 186 PHEVNYPTHDLELAAVVHALKIWRHYLIGNQCEIYTDHKSLKYFFTQPDLNLRQRRWLEL 245
Query: 1672 KK 1677
K
Sbjct: 246 IK 247
Score = 107 bits (268), Expect(5) = e-122
Identities = 49/115 (42%), Positives = 76/115 (66%)
Frame = +2
Query: 2624 NWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQVMEK 2803
NW+ C EF YNNSY S++M+P +ALYG++CR+ + W EVGE + ++ + +
Sbjct: 558 NWEKCLAFAEFSYNNSYQASLQMSPFEALYGRKCRTPLFWSEVGERQFFGPSIINEAQQN 617
Query: 2804 VKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSP 2968
V LI++ LK A S KSY++ R +L F+V + V++KV P++G RF+ GKL+P
Sbjct: 618 VDLIRKRLKEAQSRLKSYADRRRRELSFEVGDFVYLKVSPLRGTRRFQVHGKLAP 672
Score = 50.8 bits (120), Expect(5) = e-122
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +1
Query: 2956 KTQSRYI*PYKILRKIDQVSYELELPQDLIIVHLVFHVSMFRKCV 3090
K RYI PYKIL + +V+Y+LELP L +H VFHVS +KC+
Sbjct: 669 KLAPRYIGPYKILARRGEVAYQLELPPQLSDMHDVFHVSQLKKCL 713
Score = 44.3 bits (103), Expect(5) = e-122
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +3
Query: 942 YFDLLIIVFIDNILIYSRSEVDHIEHLRIVLQTL 1043
Y D ++VFID+ILIYS++E H +HLR+VL L
Sbjct: 3 YLDKFVVVFIDDILIYSKNEEAHAQHLRMVLDKL 36
Score = 62.0 bits (149), Expect = 2e-06
Identities = 30/63 (47%), Positives = 41/63 (65%)
Frame = +2
Query: 1055 KLYAKNFKCEFWLKSMAFLGHLILEKA*RLVFRKLRQ*RISPRPTSISEIRNFLGLACYY 1234
+LY K KCEFWLK +AFLGH++ E + ++ +P S+ E+R+FLGLA YY
Sbjct: 40 RLYVKFSKCEFWLKEVAFLGHVLSEGGVAVNPSNVQNVLNGKQPQSVPEVRSFLGLAGYY 99
Query: 1235 RRF 1243
RRF
Sbjct: 100 RRF 102
>gb|EOY08454.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1400
Score = 255 bits (652), Expect(3) = e-119
Identities = 120/212 (56%), Positives = 155/212 (73%)
Frame = +3
Query: 1974 TRGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRN 2153
T+G DG LRY +RL +P DGL+ +I+E+ H Y +HPG TKMY +L E+YW ++KR+
Sbjct: 1005 TKGTDGVLRYGTRLYVPDGDGLRREILEEAHMVAYVVHPGATKMYQDLKEVYWWEELKRD 1064
Query: 2154 IEDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIV 2333
+ +F+ KC CQ VKAE Q+P GL Q + +P K E I MDF+ GLPR+S +D IW++V
Sbjct: 1065 VAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGGYDSIWIVV 1124
Query: 2334 DRLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLG 2513
DRLTKSAHFLPVKTT A YA++Y+ EIVR HG +SI+ D GAQFT FW Q+ LG
Sbjct: 1125 DRLTKSAHFLPVKTTYGAAQYARVYVDEIVRQHGIPISIVFDRGAQFTGRFWGKLQEALG 1184
Query: 2514 TKVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
TK++ +T FHPQTDG E+TI TLED+LRACV
Sbjct: 1185 TKLDFSTAFHPQTDGQSERTIQTLEDMLRACV 1216
Score = 117 bits (293), Expect(3) = e-119
Identities = 93/296 (31%), Positives = 142/296 (47%), Gaps = 7/296 (2%)
Frame = +1
Query: 1129 EGVKVGFQKIEAVKN*PQTYLNLRDKKFLRSGMLLQALLEGFYSILDSLIRLTQKKVKFQ 1308
EG++V +KIE V+ P+ + F+ + ++ F I+ L +LT+K KF+
Sbjct: 756 EGIQVDTKKIEVVEKWPRPTSVTEIRSFVGLAGYYRRFVKDFSKIVAPLTKLTRKDTKFE 815
Query: 1309 WPDA*EHSFEELKMRLTFFLVLTLSEGTYGFVVYYDALGVGHECIIMQHGKVIAYASRQL 1488
W DA E+SFE+LK LT VL+LS QL
Sbjct: 816 WSDACENSFEKLKACLTTAPVLSLS---------------------------------QL 842
Query: 1489 KTYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDIFIDHKSLQYIFKQRKLNLKQNRRLE 1668
K +E+NY H+LE+ +VF LKI R+YLYG +I+ DHKSL+YIF+QR LNL+Q R +E
Sbjct: 843 KRHEQNYPIHDLEMAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRDLNLRQRRWME 902
Query: 1669 LKK----TMM---*MSSIIQEK*ICS*CS*SAIDGNLSPC*RKNRTMTKEIHRLTSLEV* 1827
L K T++ +S++ + G+L+ R++ +EIH L + V
Sbjct: 903 LLKDYDCTILYHPGKASVVAD------ALGQKSMGSLAHISICRRSLVREIHSLGDMGVR 956
Query: 1828 LLDTEDGDMFV*NRFESSLVAEVKEK*FNDPYLLQLKEGIHNHKTTTFKQGEMMVL 1995
L E + R L+ +KE D ++++ E K F +G VL
Sbjct: 957 LEVAETNALLAHFRVRPILMDRIKEAQSKDEFVIKALEDPRGRKGKMFTKGTDGVL 1012
Score = 109 bits (272), Expect(3) = e-119
Identities = 61/131 (46%), Positives = 80/131 (61%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
D W+ L+EF YNNS+ TSI+M P +ALYG+RCRS I W EVGE +LL +LV
Sbjct: 1218 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQD 1277
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSPD 2971
EK +I++ + A S QKSY++ R DLEFQV + VF+KV P KGK +PD
Sbjct: 1278 ATEKTHMIRQTMLTAQSRQKSYADNRRRDLEFQVGDHVFLKVSP--------TKGKYNPD 1329
Query: 2972 IFNHTRSYERL 3004
+H YE +
Sbjct: 1330 P-SHVIRYETI 1339
Score = 224 bits (571), Expect = 2e-55
Identities = 137/372 (36%), Positives = 201/372 (54%)
Frame = +2
Query: 140 NLVELEMVDFDIIMNMDWLSSYYVSLGCRTKIVSFEFPSKPIIE*KDDAVSLIGRFVSYL 319
NLV L+ +DFD+I+ M+WLS + S+ C K+V F+FP +P + D + +S +
Sbjct: 500 NLVVLDTLDFDVILGMNWLSPCHASVDCYHKLVRFDFPGEPSFSIQGDRSNAPTNLISVI 559
Query: 320 KVRKMISKEYIYYLVLVRDTDTQTPTF*SMPIVSEFLEVFSKDLPKVLSDREIKFRLDLL 499
R+++ + I YL +V+D+ + + +V EF++VF +LP + +RE++F +DL+
Sbjct: 560 SARRLLRQGCIGYLAVVKDSQAKIGDVTQVSVVKEFMDVFPDELPGLPPEREVEFCIDLI 619
Query: 500 SDTKTIPISPYRMALIELKELKSVKISL**EIY*AKCLTLGCTVLFVRKKYGSIHMYIDY 679
DT+ I I PYRMA ELKELK L L G F+R
Sbjct: 620 PDTRPISIPPYRMAPAELKELKDQLEDL---------LDKG----FIRPS---------- 656
Query: 680 HQLNKVTIKNKYSLSRIDDLFEQLQGV*CYSKINIILGYHQFKVKRVDILKIAFKTRYRH 859
LNKVT+KNKY L RIDDLF+QLQG C+SKI++ GYHQ +++ DI K AF+TRY H
Sbjct: 657 --LNKVTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIRNEDIPKTAFRTRYGH 714
Query: 860 FEFCVISFGLTNAPAVFY*SYEQDLQALL*SFDYCVY**YSNLFS**G*SYRTSQNSIAN 1039
+EF V+SFGLTNAP F
Sbjct: 715 YEFLVMSFGLTNAPVAF------------------------------------------- 731
Query: 1040 TVQDLKLYAKNFKCEFWLKSMAFLGHLILEKA*RLVFRKLRQ*RISPRPTSISEIRNFLG 1219
+ L + FK +L ++AFLGH++ ++ ++ +K+ PRPTS++EIR+F+G
Sbjct: 732 ----MDLMNRVFKP--YLDNVAFLGHVVSKEGIQVDTKKIEVVEKWPRPTSVTEIRSFVG 785
Query: 1220 LACYYRRF*RVF 1255
LA YYRRF + F
Sbjct: 786 LAGYYRRFVKDF 797
>gb|EOY20275.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 562
Score = 231 bits (590), Expect(3) = e-104
Identities = 118/245 (48%), Positives = 154/245 (62%), Gaps = 33/245 (13%)
Frame = +3
Query: 1974 TRGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIY-------- 2129
T+G DG LRY +RL +P DGL+ +I+E+ H + Y +HPG TKMY +L E+
Sbjct: 150 TKGTDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVXXXXXXXXX 209
Query: 2130 -------------------------WLNDMKRNIEDFIDKCSNCQ*VKAE*QRPGGLAQN 2234
W +KR++ +F+ KC CQ VKAE Q+P GL Q
Sbjct: 210 XXXXXXXXXXXXXXXXXXXXXXXXXWWEGLKRDVAEFVSKCLVCQQVKAEHQKPAGLLQP 269
Query: 2235 INIPV*K*EMINMDFIAGLPRSS*RHDLIWVIVDRLTKSAHFLPVKTTDSAEDYAKLYIQ 2414
+ P K E I MDF+ GLPR+S +D IW+++DRLTKSAHFLPVKTT A YA++Y+
Sbjct: 270 LPAPEWKWEHIAMDFVTGLPRTSGGYDSIWIVMDRLTKSAHFLPVKTTYGAAQYARVYVD 329
Query: 2415 EIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLGTKVNLNTVFHPQTDGHKEQTI*TLEDI 2594
EIVRLHG +SI+ D AQFT+ FW Q+ LGTK++ +T FHPQTDG E+TI TLED+
Sbjct: 330 EIVRLHGIPISIVSDREAQFTSRFWGKLQEALGTKLDFSTAFHPQTDGQSERTIQTLEDM 389
Query: 2595 LRACV 2609
LRACV
Sbjct: 390 LRACV 394
Score = 130 bits (327), Expect(3) = e-104
Identities = 66/119 (55%), Positives = 82/119 (68%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
D W+ L+EF YNNS+ TSI+M P +ALYG+RCRS I W EVGE +LL +LV
Sbjct: 396 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQD 455
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSP 2968
EK+ +I + + A S QKSY++ R DLEFQV + VF+KV P KGVMRF KKGKLSP
Sbjct: 456 ATEKIHMISQKMLTAQSRQKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSP 514
Score = 67.0 bits (162), Expect(3) = e-104
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 4/160 (2%)
Frame = +1
Query: 1528 LIVMVFTLKI*RYYLYGVHIDIFIDHKSLQYIFKQRKLNLKQNRRLELKK----TMM*MS 1695
+ +VF LKI R+YLYG +I+ DHKSL+YIF+QR LNL+Q R +EL K T++
Sbjct: 1 MAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRDLNLRQRRWMELLKDYDCTILYHP 60
Query: 1696 SIIQEK*ICS*CS*SAIDGNLSPC*RKNRTMTKEIHRLTSLEV*LLDTEDGDMFV*NRFE 1875
+ + S ++ G+L+ R++ +EIH L + V L E + R
Sbjct: 61 G--KANVVADALSRKSM-GSLAHISIGRRSLVREIHSLGDIGVRLEVAETNALLAHFRVR 117
Query: 1876 SSLVAEVKEK*FNDPYLLQLKEGIHNHKTTTFKQGEMMVL 1995
L+ ++KE D ++++ E K F +G VL
Sbjct: 118 PILMDKIKEAQSKDEFVIKALEDPRGRKGKMFTKGTDGVL 157
>gb|EOY08659.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 937
Score = 256 bits (653), Expect(3) = e-100
Identities = 121/212 (57%), Positives = 156/212 (73%)
Frame = +3
Query: 1974 TRGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRN 2153
T+G DG LRY +RL +P DGL+ +I+E+ H + Y IHPG TKMY +L E+YW +KR+
Sbjct: 464 TKGTDGVLRYGTRLYVPDSDGLRREILEEAHMAAYVIHPGATKMYQDLKEVYWWEGLKRD 523
Query: 2154 IEDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIV 2333
+ +F+ KC CQ VKAE Q+P GL Q + +P K E I MDF+ GLPR++ +D IW++V
Sbjct: 524 VAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTNGGYDSIWIVV 583
Query: 2334 DRLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLG 2513
DRLTKSAHFLPVKTT A YA++Y+ EIVRLHG +SI+ D GAQFT+ FW Q+ LG
Sbjct: 584 DRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISIVSDRGAQFTSRFWGKLQEALG 643
Query: 2514 TKVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
TK++ +T FHPQTDG E TI TLED+LRACV
Sbjct: 644 TKLDFSTAFHPQTDGQSEWTIQTLEDMLRACV 675
Score = 129 bits (325), Expect(3) = e-100
Identities = 65/119 (54%), Positives = 82/119 (68%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
D W+ L+EF YNNS+ TSI+M P +ALYG+RCRS I W EVGE +LL + V
Sbjct: 677 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPEFVQD 736
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSP 2968
EK+ +I++ + A S QKSY++ R DLEFQV + VF+KV P KGVMRF KKGKLSP
Sbjct: 737 ATEKIHMIRQRMLTAQSRQKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSP 795
Score = 30.4 bits (67), Expect(3) = e-100
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Frame = +1
Query: 1627 KQRKLNLKQNRRLELKKTMM*MSSIIQE----K*ICS*CS*SAIDGNLSPC*RKNRTMTK 1794
KQR LNL+Q R +EL K +I+ + S ++ G+L+ R++ K
Sbjct: 348 KQRDLNLRQRRWMELLKDYD--CTILHHPGKANVVADALSRKSM-GSLAHISIGRRSLVK 404
Query: 1795 EIHRLTSLEV*LLDTEDGDMFV*NRFESSLVAEVKEK*FNDPYLLQLKEGIHNHKTTTFK 1974
EIH L + V L E + R L+ +KE D ++++ E K F
Sbjct: 405 EIHSLGDIGVRLEVAETNALLAHFRVRPILMDRIKEAQSKDEFVIKALEDPRGKKGKMFT 464
Query: 1975 QGEMMVL 1995
+G VL
Sbjct: 465 KGTDGVL 471
Score = 67.4 bits (163), Expect = 4e-08
Identities = 32/55 (58%), Positives = 43/55 (78%)
Frame = +3
Query: 909 FIDLMNRIFKPYFDLLIIVFIDNILIYSRSEVDHIEHLRIVLQTLCRISSFTQKI 1073
F+DLMNR+FKPY D ++VFID+ILIYS+S +H +HL+IVLQ L R F +K+
Sbjct: 256 FMDLMNRVFKPYLDKFVVVFIDDILIYSKSREEHEQHLKIVLQIL-REHRFFEKL 309
>gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma
cacao]
Length = 521
Score = 257 bits (657), Expect(3) = 1e-98
Identities = 121/212 (57%), Positives = 157/212 (74%)
Frame = +3
Query: 1974 TRGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRN 2153
T+G DG LRY +RL +P DGL+ +I+E+ H + Y +HPG TKMY +L E+YW +KR+
Sbjct: 76 TKGTDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRD 135
Query: 2154 IEDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIV 2333
+ +F+ KC CQ VKAE Q+P GL Q + +P K E I MDF+ GLPR+S +D IW++V
Sbjct: 136 VAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGGYDSIWIVV 195
Query: 2334 DRLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLG 2513
DRLTKSAHFLPVKTT A YA++Y+ EIVRLHG +SI+ D GAQFT+ FW Q+ LG
Sbjct: 196 DRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISIVSDRGAQFTSRFWGKLQEALG 255
Query: 2514 TKVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
TK++ +T FHPQTDG E+TI TLED+LRACV
Sbjct: 256 TKLDFSTAFHPQTDGQSERTIQTLEDMLRACV 287
Score = 129 bits (324), Expect(3) = 1e-98
Identities = 65/119 (54%), Positives = 82/119 (68%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
D W+ L+EF YNNS+ TSI+M P +ALYG+RCRS I W EVGE +LL +LV
Sbjct: 289 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQD 348
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSP 2968
EK+ +I++ + A S KSY++ R DLEFQV + VF+KV P KGVMRF KKGKLSP
Sbjct: 349 ATEKIHMIRQRMLTAQSRHKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSP 407
Score = 25.0 bits (53), Expect(3) = 1e-98
Identities = 18/72 (25%), Positives = 32/72 (44%)
Frame = +1
Query: 1780 RTMTKEIHRLTSLEV*LLDTEDGDMFV*NRFESSLVAEVKEK*FNDPYLLQLKEGIHNHK 1959
R++ +EIH L + V L E + R L+ ++KE + ++++ E K
Sbjct: 12 RSLVREIHSLGDIGVRLEVAETNALLAHFRVRPILMDKIKEAQSKNEFVIKALEDPQGRK 71
Query: 1960 TTTFKQGEMMVL 1995
F +G VL
Sbjct: 72 GKMFTKGTDGVL 83
>gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 1447
Score = 254 bits (649), Expect(2) = 3e-97
Identities = 120/212 (56%), Positives = 156/212 (73%)
Frame = +3
Query: 1974 TRGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRN 2153
T+G DG LRY +RL +P DGL+ +I+E+ H + Y +HPG TKMY +L E+YW +KR+
Sbjct: 1002 TKGTDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRD 1061
Query: 2154 IEDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIV 2333
+ +F+ KC CQ VKAE Q+P GL Q + +P K E I MDF+ GLPR+S +D IW++V
Sbjct: 1062 VAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGGYDSIWIVV 1121
Query: 2334 DRLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLG 2513
DRLTKSAHFLPVKTT A YA++Y+ EIVRLHG +SI+ D GAQFT+ FW Q+ LG
Sbjct: 1122 DRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISIVSDRGAQFTSRFWGKLQEALG 1181
Query: 2514 TKVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
TK++ +T FHPQTDG E+TI TLE +LRACV
Sbjct: 1182 TKLDFSTAFHPQTDGQSERTIQTLEAMLRACV 1213
Score = 131 bits (329), Expect(2) = 3e-97
Identities = 66/119 (55%), Positives = 83/119 (69%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
D W+ L+EF YNNS+ TSI+M P +ALYG+RCRS I W EVGE +LL +LV
Sbjct: 1215 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQD 1274
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSP 2968
EK+ +I++ + A S QKSY++ R DLEFQV + VF+KV P KGVMRF KKGKLSP
Sbjct: 1275 ATEKIHMIRQRMLTAQSRQKSYADNRRRDLEFQVGDHVFLKVSPTKGVMRFGKKGKLSP 1333
Score = 291 bits (746), Expect = 9e-76
Identities = 160/373 (42%), Positives = 237/373 (63%), Gaps = 1/373 (0%)
Frame = +2
Query: 140 NLVELEMVDFDIIMNMDWLSSYYVSLGCRTKIVSFEFPSKPIIE*KDDAVSLIGRFVSYL 319
NLV L+ +DFD+I+ M+WLS + S+ C K+V F+FP +P + D + +S +
Sbjct: 422 NLVVLDTLDFDVILGMNWLSPCHASVDCYHKLVRFDFPGEPSFSIQGDRSNAPTNLISVI 481
Query: 320 KVRKMISKEYIYYLVLVRDTDTQTPTF*SMPIVSEFLEVFSKDLPKVLSDREIKFRLDLL 499
R+++ + I YL +V+D+ + + +V EF++VF ++LP + +RE++F +DL+
Sbjct: 482 SARRLLRQGCIGYLAVVKDSQAKIGDVTQVSVVKEFVDVFPEELPSLPPEREVEFCIDLI 541
Query: 500 SDTKTIPISPYRMALIELKELKSVKISL**EIY*AKCLT-LGCTVLFVRKKYGSIHMYID 676
DT+ I I PYRMA ELKELK L + + ++ G VLFV+KK GS+ + ID
Sbjct: 542 PDTRPISIPPYRMAPAELKELKDQLEDLLDKGFIRPSVSPWGAPVLFVKKKDGSLRLCID 601
Query: 677 YHQLNKVTIKNKYSLSRIDDLFEQLQGV*CYSKINIILGYHQFKVKRVDILKIAFKTRYR 856
Y QLNKVT+KNKY L RIDDLF+QLQG C+SKI++ GYHQ +++ DI K AF+TRY
Sbjct: 602 YRQLNKVTVKNKYPLPRIDDLFDQLQGAQCFSKIDLRSGYHQLRIRNEDIPKTAFRTRYG 661
Query: 857 HFEFCVISFGLTNAPAVFY*SYEQDLQALL*SFDYCVY**YSNLFS**G*SYRTSQNSIA 1036
H+EF V+SFGLTNAPA F + + L F V+ ++S + +
Sbjct: 662 HYEFLVMSFGLTNAPAAFMDLMNRVFKPYLDKF-VVVFIDDILIYSKSREEHEQHLKIVL 720
Query: 1037 NTVQDLKLYAKNFKCEFWLKSMAFLGHLILEKA*RLVFRKLRQ*RISPRPTSISEIRNFL 1216
+++ +LYAK KCEFWL+S+AFLGH++ ++ R+ +K+ PRPTS+SEIR+F+
Sbjct: 721 QILREHRLYAKFSKCEFWLESVAFLGHVVSKEGIRVDTKKIEAVEKWPRPTSVSEIRSFV 780
Query: 1217 GLACYYRRF*RVF 1255
GLA YYRRF + F
Sbjct: 781 GLAGYYRRFVKDF 793
Score = 172 bits (435), Expect(2) = 2e-42
Identities = 91/183 (49%), Positives = 126/183 (68%)
Frame = +1
Query: 1129 EGVKVGFQKIEAVKN*PQTYLNLRDKKFLRSGMLLQALLEGFYSILDSLIRLTQKKVKFQ 1308
EG++V +KIEAV+ P+ + F+ + ++ F I+ L +LT+K KF+
Sbjct: 752 EGIRVDTKKIEAVEKWPRPTSVSEIRSFVGLAGYYRRFVKDFSKIVAPLTKLTRKDTKFE 811
Query: 1309 WPDA*EHSFEELKMRLTFFLVLTLSEGTYGFVVYYDALGVGHECIIMQHGKVIAYASRQL 1488
W DA E+SFE+LK LT VL+L +GT G+ ++ DA GVG C++MQHGKVIAYASRQL
Sbjct: 812 WSDACENSFEKLKACLTTAPVLSLPQGTGGYTMFCDASGVGLGCVLMQHGKVIAYASRQL 871
Query: 1489 KTYEKNYLTHNLELIVMVFTLKI*RYYLYGVHIDIFIDHKSLQYIFKQRKLNLKQNRRLE 1668
K +E+NY H+LE+ +VF LKI R+YLYG +I+ DHKSL+YIF+QR LNL+Q R +E
Sbjct: 872 KRHEQNYPIHDLEMAAIVFALKIWRHYLYGETCEIYTDHKSLKYIFQQRDLNLRQCRWME 931
Query: 1669 LKK 1677
L K
Sbjct: 932 LLK 934
Score = 30.4 bits (67), Expect(2) = 2e-42
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +2
Query: 1709 KNKYVADALSRRSMGILAHV 1768
K VADALSR+SMG LAH+
Sbjct: 946 KANVVADALSRKSMGSLAHI 965
>gb|EOY21678.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
Length = 448
Score = 257 bits (657), Expect(2) = 5e-97
Identities = 121/212 (57%), Positives = 157/212 (74%)
Frame = +3
Query: 1974 TRGDDGTLRYRSRLCIPYVDGLKEKIMEKIHNSRYSIHPGYTKMYHNLNEIYWLNDMKRN 2153
T+G DG LRY +RL +P DGL+ +I+E+ H + Y +HPG TKMY +L E+YW +KR+
Sbjct: 3 TKGTDGVLRYGTRLYVPDGDGLRREILEEAHMAAYVVHPGATKMYQDLKEVYWWEGLKRD 62
Query: 2154 IEDFIDKCSNCQ*VKAE*QRPGGLAQNINIPV*K*EMINMDFIAGLPRSS*RHDLIWVIV 2333
+ +F+ KC CQ VKAE Q+P GL Q + +P K E I MDF+ GLPR+S +D IW++V
Sbjct: 63 VAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGGYDSIWIVV 122
Query: 2334 DRLTKSAHFLPVKTTDSAEDYAKLYIQEIVRLHGTSVSIILDCGAQFTAHFWKSFQKGLG 2513
DRLTKSAHFLPVKTT A YA++Y+ EIVRLHG +SI+ D GAQFT+ FW Q+ LG
Sbjct: 123 DRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISIVSDRGAQFTSRFWGKLQEALG 182
Query: 2514 TKVNLNTVFHPQTDGHKEQTI*TLEDILRACV 2609
TK++ +T FHPQTDG E+TI TLED+LRACV
Sbjct: 183 TKLDFSTAFHPQTDGQSERTIQTLEDMLRACV 214
Score = 127 bits (319), Expect(2) = 5e-97
Identities = 64/119 (53%), Positives = 82/119 (68%)
Frame = +2
Query: 2612 DFKGNWDDCFTLIEFVYNNSYHTSIKMTPLKALYGQRCRSLIDWFEVGETELLRLDLVYQ 2791
D W+ L+EF YNNS+ TSI+M P +ALYG+RCRS I W EVGE +LL +LV
Sbjct: 216 DLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGRRCRSPIGWLEVGERKLLGPELVQD 275
Query: 2792 VMEKVKLIQEHLKIAWSIQKSYSNVRCTDLEFQVDN*VFMKVLPIKGVMRFEKKGKLSP 2968
EK+ +I++ + A S QKSY++ R LEFQV + VF+KV P KG+MRF KKGKLSP
Sbjct: 276 ATEKIHMIRQRMLTAQSRQKSYADNRRRYLEFQVGDHVFLKVSPTKGIMRFGKKGKLSP 334