BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00026589
         (678 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transc...   394   e-107
ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transc...   387   e-105
gb|EPS73151.1| hypothetical protein M569_01605, partial [Genlise...   317   3e-84
ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transc...   281   2e-73
ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [A...   262   6e-68
gb|EOY33216.1| BSD domain (BTF2-like transcription factors, Syna...   258   2e-66
gb|EOY33215.1| BSD domain (BTF2-like transcription factors, Syna...   258   2e-66
gb|EOY33214.1| BSD domain (BTF2-like transcription factors, Syna...   258   2e-66
gb|EOY33213.1| BSD domain (BTF2-like transcription factors, Syna...   258   2e-66
gb|EOY33212.1| BSD domain (BTF2-like transcription factors, Syna...   258   2e-66
gb|EOY33211.1| BSD domain (BTF2-like transcription factors, Syna...   258   2e-66
ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transc...   256   6e-66
ref|XP_006452719.1| hypothetical protein CICLE_v10007802mg [Citr...   254   1e-65
ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citr...   254   1e-65
ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citr...   254   1e-65
ref|XP_006452716.1| hypothetical protein CICLE_v10007802mg [Citr...   254   1e-65
ref|XP_006452715.1| hypothetical protein CICLE_v10007802mg [Citr...   254   1e-65
ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transc...   253   5e-65
ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Caps...   236   6e-60
gb|AFW61225.1| hypothetical protein ZEAMMB73_026868 [Zea mays]        235   1e-59

>ref|XP_006352543.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Solanum tuberosum]
          Length = 599

 Score =  394 bits (1013), Expect = e-107
 Identities = 204/226 (90%), Positives = 206/226 (91%), Gaps = 1/226 (0%)
 Frame = -3

Query: 676 LIKGHKFSKEGSSKQALLNLTQDQGG-YIFEFDSFPDRDQCRDFVASAIAACMEVGKAAS 500
           LIKGHK SKE SSKQALLNLTQ QGG Y+FEFDSFPDRDQCRDFVASAIAAC E+GKA S
Sbjct: 51  LIKGHKSSKECSSKQALLNLTQAQGGNYLFEFDSFPDRDQCRDFVASAIAACGEIGKATS 110

Query: 499 EKPAVPHDEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSEN 320
           EKPAVPHDEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSEN
Sbjct: 111 EKPAVPHDEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSEN 170

Query: 319 KKPKQRVALKNDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMSE 140
           KKPKQRVALKNDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYL FVPGKMSE
Sbjct: 171 KKPKQRVALKNDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSE 230

Query: 139 KEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASEA 2
           KEFWTKYSRAEYLHSTKNIV            AVFLKQDDML SEA
Sbjct: 231 KEFWTKYSRAEYLHSTKNIVAAAAEAAEDEELAVFLKQDDMLVSEA 276


>ref|XP_004248296.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Solanum lycopersicum]
          Length = 599

 Score =  387 bits (995), Expect = e-105
 Identities = 200/226 (88%), Positives = 203/226 (89%), Gaps = 1/226 (0%)
 Frame = -3

Query: 676 LIKGHKFSKEGSSKQALLNLTQDQGG-YIFEFDSFPDRDQCRDFVASAIAACMEVGKAAS 500
           LIKGHK SKE SSKQALLNLTQ QGG Y+FEFDSFPDRDQCRDFVASAIAAC E+GKA S
Sbjct: 51  LIKGHKSSKECSSKQALLNLTQAQGGNYLFEFDSFPDRDQCRDFVASAIAACGEIGKATS 110

Query: 499 EKPAVPHDEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSEN 320
           EKPAVPHDEQLSATEMGRRIKLLQENSELQ LHR+LVI GILSE EFWAARKKLLEQSEN
Sbjct: 111 EKPAVPHDEQLSATEMGRRIKLLQENSELQNLHRELVIAGILSETEFWAARKKLLEQSEN 170

Query: 319 KKPKQRVALKNDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMSE 140
           KKPKQRVALKNDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYL FVPGKMSE
Sbjct: 171 KKPKQRVALKNDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLKFVPGKMSE 230

Query: 139 KEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASEA 2
           KEFWTKYSRAEYLHSTKNIV            AVFLKQDDML SEA
Sbjct: 231 KEFWTKYSRAEYLHSTKNIVAAAAEAAEDEELAVFLKQDDMLVSEA 276


>gb|EPS73151.1| hypothetical protein M569_01605, partial [Genlisea aurea]
          Length = 281

 Score =  317 bits (811), Expect = 3e-84
 Identities = 161/227 (70%), Positives = 189/227 (83%), Gaps = 2/227 (0%)
 Frame = -3

Query: 676 LIKGHKFSKEGSSKQALLNLTQDQGG-YIFEFDSFPDRDQCRDFVASAIAACMEVGKAAS 500
           L+KGHKF+KEGSSKQA+LNLT +QGG YIFEF+ FPDRD CR+FVA+AIA   E GK+ +
Sbjct: 51  LLKGHKFTKEGSSKQAMLNLTMEQGGNYIFEFECFPDRDACREFVANAIALHAEPGKSVA 110

Query: 499 EKPAVPHD-EQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSE 323
           E+   P   EQLS  E+ RRIKLLQENSELQ LH+QLV GGIL+EAEFWA R+KLLEQ++
Sbjct: 111 ERVDAPATGEQLSRAELERRIKLLQENSELQALHKQLVYGGILTEAEFWATRQKLLEQND 170

Query: 322 NKKPKQRVALKNDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMS 143
           +++ KQR+ALKN+MW VKPLSDGQ+NRVTFNLTPE+IHQIFAEKPAVR+AYL FVP KM+
Sbjct: 171 SRRHKQRLALKNEMWIVKPLSDGQSNRVTFNLTPEIIHQIFAEKPAVREAYLRFVPEKMT 230

Query: 142 EKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASEA 2
           EKEFWTKYSRAEYLHST+NIV            AVFLK+DDML +EA
Sbjct: 231 EKEFWTKYSRAEYLHSTRNIVAAAAEAAEDEELAVFLKRDDMLVNEA 277


>ref|XP_002276057.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1 [Vitis vinifera]
           gi|296090002|emb|CBI39821.3| unnamed protein product
           [Vitis vinifera]
          Length = 602

 Score =  281 bits (718), Expect = 2e-73
 Identities = 147/229 (64%), Positives = 176/229 (76%), Gaps = 5/229 (2%)
 Frame = -3

Query: 673 IKGHKFSKEGSSKQALLNLTQDQ---GGYIFEFDSFPDRDQCRDFVASAIAACMEVGKAA 503
           IKGHKFSK GS+K ALLNLTQD    GGYIFEF+++PDR+ CR+FV  A+A   E  KA 
Sbjct: 51  IKGHKFSKGGSNKPALLNLTQDSEKGGGYIFEFENYPDREVCREFVGRALAKFSEASKAG 110

Query: 502 SEKPAVP-HDEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQS 326
           SE+ AV   DEQLS  EM RRIKLL+E+SELQKLH+Q V+ G+L+EAEFWA RKKLL+ +
Sbjct: 111 SEQSAVKLFDEQLSTIEMERRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDGN 170

Query: 325 ENKKPKQRVALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGK 149
            ++  KQRV  K+ M S +KPL+DG+TNRVTFNLTPE+IHQIFAEKPAV QA+LNFVP K
Sbjct: 171 TSRTSKQRVGFKSAMISDLKPLTDGRTNRVTFNLTPEIIHQIFAEKPAVHQAFLNFVPNK 230

Query: 148 MSEKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASEA 2
           M+EK+FW KY RAEYLH T+N V            AVFLK DD+LA+EA
Sbjct: 231 MTEKDFWNKYCRAEYLHCTRNTVAAAAEAAEDEELAVFLKHDDILANEA 279


>ref|XP_006857637.1| hypothetical protein AMTR_s00061p00135540 [Amborella trichopoda]
           gi|548861733|gb|ERN19104.1| hypothetical protein
           AMTR_s00061p00135540 [Amborella trichopoda]
          Length = 626

 Score =  262 bits (670), Expect = 6e-68
 Identities = 140/232 (60%), Positives = 170/232 (73%), Gaps = 8/232 (3%)
 Frame = -3

Query: 673 IKGHKFSKEGSSKQALLNLTQDQGG-YIFEFDSFPDRDQCRDFVASAIAA--CMEVGKAA 503
           IKGHKFSKEGS KQALLNLTQD+GG Y+FEF +F DRD CRD V   +    C+     +
Sbjct: 53  IKGHKFSKEGS-KQALLNLTQDKGGGYMFEFANFKDRDVCRDLVGRVLGRLQCLPPSDQS 111

Query: 502 SE----KPAVPHDEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLL 335
           ++    +P   HD QLS  EM +R+ LL+E+SELQKLHRQLVIGG+L+E EFWA RK LL
Sbjct: 112 AQVVPAQPTTQHDNQLSMAEMEQRMNLLREDSELQKLHRQLVIGGVLTETEFWATRKNLL 171

Query: 334 EQSENKKPKQRVALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFV 158
           + + +K  KQR   K+ M + V+PL+DG+TN+VTF+LTPE+IHQIFAEKPAV QA+L FV
Sbjct: 172 DDAAHKASKQRAGFKSAMLADVRPLTDGRTNKVTFSLTPEIIHQIFAEKPAVHQAFLKFV 231

Query: 157 PGKMSEKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASEA 2
           P KMSE++FWTKY RAEYLH TKN V            AVFLK DD+LASEA
Sbjct: 232 PSKMSERDFWTKYCRAEYLHRTKNSVAAAAEAAEDEELAVFLKHDDILASEA 283


>gb|EOY33216.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins) isoform 6 [Theobroma
           cacao]
          Length = 467

 Score =  258 bits (658), Expect = 2e-66
 Identities = 139/227 (61%), Positives = 169/227 (74%), Gaps = 3/227 (1%)
 Frame = -3

Query: 673 IKGHKFSKEGSSKQALLNLTQDQGG-YIFEFDSFPDRDQCRDFVASAIAACMEVGKAASE 497
           IKG K +KEGSSK   LNLT +Q G +IFEF+++ D   CRDFV   +A   EV    SE
Sbjct: 52  IKGQKHTKEGSSKPPWLNLTNNQNGSFIFEFENYSDLQDCRDFVGKVLAKSGEV----SE 107

Query: 496 KPAVPH-DEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSEN 320
           KP V + DEQLSA EM  RIKLL+E+SELQKLH+Q V+ G+L+EAEFWA RKKLL++  N
Sbjct: 108 KPTVTYPDEQLSAAEMELRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDREAN 167

Query: 319 KKPKQRVALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMS 143
           KK KQR+  K+ M S +KP +DG+TN+VTFNLTPE+I QIFAEKPAV +A+L +VP KMS
Sbjct: 168 KKTKQRLGFKSAMISDIKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMS 227

Query: 142 EKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASEA 2
           E++FWTKY RAEYLHSTKN V            AVFLKQDD+LASE+
Sbjct: 228 ERDFWTKYFRAEYLHSTKNSVAAAAEAAEDEELAVFLKQDDILASES 274


>gb|EOY33215.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins), putative isoform 5,
           partial [Theobroma cacao]
          Length = 481

 Score =  258 bits (658), Expect = 2e-66
 Identities = 139/227 (61%), Positives = 169/227 (74%), Gaps = 3/227 (1%)
 Frame = -3

Query: 673 IKGHKFSKEGSSKQALLNLTQDQGG-YIFEFDSFPDRDQCRDFVASAIAACMEVGKAASE 497
           IKG K +KEGSSK   LNLT +Q G +IFEF+++ D   CRDFV   +A   EV    SE
Sbjct: 52  IKGQKHTKEGSSKPPWLNLTNNQNGSFIFEFENYSDLQDCRDFVGKVLAKSGEV----SE 107

Query: 496 KPAVPH-DEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSEN 320
           KP V + DEQLSA EM  RIKLL+E+SELQKLH+Q V+ G+L+EAEFWA RKKLL++  N
Sbjct: 108 KPTVTYPDEQLSAAEMELRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDREAN 167

Query: 319 KKPKQRVALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMS 143
           KK KQR+  K+ M S +KP +DG+TN+VTFNLTPE+I QIFAEKPAV +A+L +VP KMS
Sbjct: 168 KKTKQRLGFKSAMISDIKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMS 227

Query: 142 EKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASEA 2
           E++FWTKY RAEYLHSTKN V            AVFLKQDD+LASE+
Sbjct: 228 ERDFWTKYFRAEYLHSTKNSVAAAAEAAEDEELAVFLKQDDILASES 274


>gb|EOY33214.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins) isoform 4, partial
           [Theobroma cacao]
          Length = 516

 Score =  258 bits (658), Expect = 2e-66
 Identities = 139/227 (61%), Positives = 169/227 (74%), Gaps = 3/227 (1%)
 Frame = -3

Query: 673 IKGHKFSKEGSSKQALLNLTQDQGG-YIFEFDSFPDRDQCRDFVASAIAACMEVGKAASE 497
           IKG K +KEGSSK   LNLT +Q G +IFEF+++ D   CRDFV   +A   EV    SE
Sbjct: 8   IKGQKHTKEGSSKPPWLNLTNNQNGSFIFEFENYSDLQDCRDFVGKVLAKSGEV----SE 63

Query: 496 KPAVPH-DEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSEN 320
           KP V + DEQLSA EM  RIKLL+E+SELQKLH+Q V+ G+L+EAEFWA RKKLL++  N
Sbjct: 64  KPTVTYPDEQLSAAEMELRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDREAN 123

Query: 319 KKPKQRVALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMS 143
           KK KQR+  K+ M S +KP +DG+TN+VTFNLTPE+I QIFAEKPAV +A+L +VP KMS
Sbjct: 124 KKTKQRLGFKSAMISDIKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMS 183

Query: 142 EKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASEA 2
           E++FWTKY RAEYLHSTKN V            AVFLKQDD+LASE+
Sbjct: 184 ERDFWTKYFRAEYLHSTKNSVAAAAEAAEDEELAVFLKQDDILASES 230


>gb|EOY33213.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins) isoform 3 [Theobroma
           cacao]
          Length = 549

 Score =  258 bits (658), Expect = 2e-66
 Identities = 139/227 (61%), Positives = 169/227 (74%), Gaps = 3/227 (1%)
 Frame = -3

Query: 673 IKGHKFSKEGSSKQALLNLTQDQGG-YIFEFDSFPDRDQCRDFVASAIAACMEVGKAASE 497
           IKG K +KEGSSK   LNLT +Q G +IFEF+++ D   CRDFV   +A   EV    SE
Sbjct: 52  IKGQKHTKEGSSKPPWLNLTNNQNGSFIFEFENYSDLQDCRDFVGKVLAKSGEV----SE 107

Query: 496 KPAVPH-DEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSEN 320
           KP V + DEQLSA EM  RIKLL+E+SELQKLH+Q V+ G+L+EAEFWA RKKLL++  N
Sbjct: 108 KPTVTYPDEQLSAAEMELRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDREAN 167

Query: 319 KKPKQRVALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMS 143
           KK KQR+  K+ M S +KP +DG+TN+VTFNLTPE+I QIFAEKPAV +A+L +VP KMS
Sbjct: 168 KKTKQRLGFKSAMISDIKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMS 227

Query: 142 EKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASEA 2
           E++FWTKY RAEYLHSTKN V            AVFLKQDD+LASE+
Sbjct: 228 ERDFWTKYFRAEYLHSTKNSVAAAAEAAEDEELAVFLKQDDILASES 274


>gb|EOY33212.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins) isoform 2, partial
           [Theobroma cacao]
          Length = 505

 Score =  258 bits (658), Expect = 2e-66
 Identities = 139/227 (61%), Positives = 169/227 (74%), Gaps = 3/227 (1%)
 Frame = -3

Query: 673 IKGHKFSKEGSSKQALLNLTQDQGG-YIFEFDSFPDRDQCRDFVASAIAACMEVGKAASE 497
           IKG K +KEGSSK   LNLT +Q G +IFEF+++ D   CRDFV   +A   EV    SE
Sbjct: 8   IKGQKHTKEGSSKPPWLNLTNNQNGSFIFEFENYSDLQDCRDFVGKVLAKSGEV----SE 63

Query: 496 KPAVPH-DEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSEN 320
           KP V + DEQLSA EM  RIKLL+E+SELQKLH+Q V+ G+L+EAEFWA RKKLL++  N
Sbjct: 64  KPTVTYPDEQLSAAEMELRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDREAN 123

Query: 319 KKPKQRVALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMS 143
           KK KQR+  K+ M S +KP +DG+TN+VTFNLTPE+I QIFAEKPAV +A+L +VP KMS
Sbjct: 124 KKTKQRLGFKSAMISDIKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMS 183

Query: 142 EKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASEA 2
           E++FWTKY RAEYLHSTKN V            AVFLKQDD+LASE+
Sbjct: 184 ERDFWTKYFRAEYLHSTKNSVAAAAEAAEDEELAVFLKQDDILASES 230


>gb|EOY33211.1| BSD domain (BTF2-like transcription factors, Synapse-associated
           proteins and DOS2-like proteins), putative isoform 1
           [Theobroma cacao]
          Length = 646

 Score =  258 bits (658), Expect = 2e-66
 Identities = 139/227 (61%), Positives = 169/227 (74%), Gaps = 3/227 (1%)
 Frame = -3

Query: 673 IKGHKFSKEGSSKQALLNLTQDQGG-YIFEFDSFPDRDQCRDFVASAIAACMEVGKAASE 497
           IKG K +KEGSSK   LNLT +Q G +IFEF+++ D   CRDFV   +A   EV    SE
Sbjct: 52  IKGQKHTKEGSSKPPWLNLTNNQNGSFIFEFENYSDLQDCRDFVGKVLAKSGEV----SE 107

Query: 496 KPAVPH-DEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSEN 320
           KP V + DEQLSA EM  RIKLL+E+SELQKLH+Q V+ G+L+EAEFWA RKKLL++  N
Sbjct: 108 KPTVTYPDEQLSAAEMELRIKLLREDSELQKLHKQFVLSGVLTEAEFWATRKKLLDREAN 167

Query: 319 KKPKQRVALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMS 143
           KK KQR+  K+ M S +KP +DG+TN+VTFNLTPE+I QIFAEKPAV +A+L +VP KMS
Sbjct: 168 KKTKQRLGFKSAMISDIKPSTDGRTNKVTFNLTPEIILQIFAEKPAVHRAFLTYVPNKMS 227

Query: 142 EKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASEA 2
           E++FWTKY RAEYLHSTKN V            AVFLKQDD+LASE+
Sbjct: 228 ERDFWTKYFRAEYLHSTKNSVAAAAEAAEDEELAVFLKQDDILASES 274


>ref|XP_004142720.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Cucumis sativus]
          Length = 729

 Score =  256 bits (653), Expect = 6e-66
 Identities = 137/227 (60%), Positives = 168/227 (74%), Gaps = 4/227 (1%)
 Frame = -3

Query: 673 IKGHKFSKEGSSKQALLNLTQDQGG-YIFEFDSFPDRDQCRDFVASAIAACMEVGKAASE 497
           IKGHK +KEGS+K   LNLT+DQGG YIFEF +F D   CR+ V SA+A   E  +A SE
Sbjct: 52  IKGHKNTKEGSNKPPWLNLTKDQGGSYIFEFKNFSDLHVCRELVGSALAKLGEAAQAPSE 111

Query: 496 KP--AVPHDEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSE 323
           +P  A PH EQLS  EM  R++ LQE+SELQKLH+Q VIGG+L+E+EFWAARKKLLEQ  
Sbjct: 112 RPVAAFPH-EQLSKLEMELRMRCLQEDSELQKLHKQFVIGGVLTESEFWAARKKLLEQDN 170

Query: 322 NKKPKQRVALKNDM-WSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGKM 146
           +KK KQ +  K+ M    KP+SDG+TN+VTFNLTPE+ +QIFA KPAV QA+LN VP K+
Sbjct: 171 SKKSKQLIGFKSSMVLDTKPMSDGRTNKVTFNLTPEIKYQIFALKPAVHQAFLNHVPNKI 230

Query: 145 SEKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASE 5
           SEK+FWTKY RAEYLHSTKN +            A+FLK D++LA+E
Sbjct: 231 SEKDFWTKYFRAEYLHSTKNSIAAAAEAAEDEELALFLKDDEILAAE 277


>ref|XP_006452719.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
           gi|557555945|gb|ESR65959.1| hypothetical protein
           CICLE_v10007802mg [Citrus clementina]
          Length = 557

 Score =  254 bits (650), Expect = 1e-65
 Identities = 139/226 (61%), Positives = 165/226 (73%), Gaps = 3/226 (1%)
 Frame = -3

Query: 673 IKGHKFSKEGSSKQALLNLTQDQGG-YIFEFDSFPDRDQCRDFVASAIAACMEVGKAASE 497
           I+GHK++KEGS+K  L+NL   QGG YIFEFDS+ D   CRDFV+  +    E   AA E
Sbjct: 53  IQGHKYTKEGSNKPPLINLANAQGGSYIFEFDSYSDLHVCRDFVSKVLEKSKETPNAALE 112

Query: 496 KPAVP-HDEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSEN 320
           K AV   DEQLS  EM  RIKLLQENSELQKLHRQ V G IL+EAEFWAARKKLL++  +
Sbjct: 113 KSAVKLPDEQLSEEEMQLRIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDRDPS 172

Query: 319 KKPKQRVALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMS 143
           KK KQRV  K+ M S ++P +DG+TN+VTF+LTPE+I QIFAEKPAV +A+LNFVP KM+
Sbjct: 173 KKSKQRVGFKSAMISDIRPATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKMT 232

Query: 142 EKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASE 5
           E EFWTKY RAEYL  TKN              AVFLK+DD+LA+E
Sbjct: 233 EMEFWTKYCRAEYLSRTKNYHAVVAEAAEDEELAVFLKEDDILANE 278


>ref|XP_006452718.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
           gi|557555944|gb|ESR65958.1| hypothetical protein
           CICLE_v10007802mg [Citrus clementina]
          Length = 564

 Score =  254 bits (650), Expect = 1e-65
 Identities = 139/226 (61%), Positives = 165/226 (73%), Gaps = 3/226 (1%)
 Frame = -3

Query: 673 IKGHKFSKEGSSKQALLNLTQDQGG-YIFEFDSFPDRDQCRDFVASAIAACMEVGKAASE 497
           I+GHK++KEGS+K  L+NL   QGG YIFEFDS+ D   CRDFV+  +    E   AA E
Sbjct: 20  IQGHKYTKEGSNKPPLINLANAQGGSYIFEFDSYSDLHVCRDFVSKVLEKSKETPNAALE 79

Query: 496 KPAVP-HDEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSEN 320
           K AV   DEQLS  EM  RIKLLQENSELQKLHRQ V G IL+EAEFWAARKKLL++  +
Sbjct: 80  KSAVKLPDEQLSEEEMQLRIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDRDPS 139

Query: 319 KKPKQRVALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMS 143
           KK KQRV  K+ M S ++P +DG+TN+VTF+LTPE+I QIFAEKPAV +A+LNFVP KM+
Sbjct: 140 KKSKQRVGFKSAMISDIRPATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKMT 199

Query: 142 EKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASE 5
           E EFWTKY RAEYL  TKN              AVFLK+DD+LA+E
Sbjct: 200 EMEFWTKYCRAEYLSRTKNYHAVVAEAAEDEELAVFLKEDDILANE 245


>ref|XP_006452717.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
           gi|557555943|gb|ESR65957.1| hypothetical protein
           CICLE_v10007802mg [Citrus clementina]
          Length = 597

 Score =  254 bits (650), Expect = 1e-65
 Identities = 139/226 (61%), Positives = 165/226 (73%), Gaps = 3/226 (1%)
 Frame = -3

Query: 673 IKGHKFSKEGSSKQALLNLTQDQGG-YIFEFDSFPDRDQCRDFVASAIAACMEVGKAASE 497
           I+GHK++KEGS+K  L+NL   QGG YIFEFDS+ D   CRDFV+  +    E   AA E
Sbjct: 53  IQGHKYTKEGSNKPPLINLANAQGGSYIFEFDSYSDLHVCRDFVSKVLEKSKETPNAALE 112

Query: 496 KPAVP-HDEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSEN 320
           K AV   DEQLS  EM  RIKLLQENSELQKLHRQ V G IL+EAEFWAARKKLL++  +
Sbjct: 113 KSAVKLPDEQLSEEEMQLRIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDRDPS 172

Query: 319 KKPKQRVALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMS 143
           KK KQRV  K+ M S ++P +DG+TN+VTF+LTPE+I QIFAEKPAV +A+LNFVP KM+
Sbjct: 173 KKSKQRVGFKSAMISDIRPATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKMT 232

Query: 142 EKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASE 5
           E EFWTKY RAEYL  TKN              AVFLK+DD+LA+E
Sbjct: 233 EMEFWTKYCRAEYLSRTKNYHAVVAEAAEDEELAVFLKEDDILANE 278


>ref|XP_006452716.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
           gi|557555942|gb|ESR65956.1| hypothetical protein
           CICLE_v10007802mg [Citrus clementina]
          Length = 533

 Score =  254 bits (650), Expect = 1e-65
 Identities = 139/226 (61%), Positives = 165/226 (73%), Gaps = 3/226 (1%)
 Frame = -3

Query: 673 IKGHKFSKEGSSKQALLNLTQDQGG-YIFEFDSFPDRDQCRDFVASAIAACMEVGKAASE 497
           I+GHK++KEGS+K  L+NL   QGG YIFEFDS+ D   CRDFV+  +    E   AA E
Sbjct: 53  IQGHKYTKEGSNKPPLINLANAQGGSYIFEFDSYSDLHVCRDFVSKVLEKSKETPNAALE 112

Query: 496 KPAVP-HDEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSEN 320
           K AV   DEQLS  EM  RIKLLQENSELQKLHRQ V G IL+EAEFWAARKKLL++  +
Sbjct: 113 KSAVKLPDEQLSEEEMQLRIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDRDPS 172

Query: 319 KKPKQRVALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMS 143
           KK KQRV  K+ M S ++P +DG+TN+VTF+LTPE+I QIFAEKPAV +A+LNFVP KM+
Sbjct: 173 KKSKQRVGFKSAMISDIRPATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKMT 232

Query: 142 EKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASE 5
           E EFWTKY RAEYL  TKN              AVFLK+DD+LA+E
Sbjct: 233 EMEFWTKYCRAEYLSRTKNYHAVVAEAAEDEELAVFLKEDDILANE 278


>ref|XP_006452715.1| hypothetical protein CICLE_v10007802mg [Citrus clementina]
           gi|557555941|gb|ESR65955.1| hypothetical protein
           CICLE_v10007802mg [Citrus clementina]
          Length = 536

 Score =  254 bits (650), Expect = 1e-65
 Identities = 139/226 (61%), Positives = 165/226 (73%), Gaps = 3/226 (1%)
 Frame = -3

Query: 673 IKGHKFSKEGSSKQALLNLTQDQGG-YIFEFDSFPDRDQCRDFVASAIAACMEVGKAASE 497
           I+GHK++KEGS+K  L+NL   QGG YIFEFDS+ D   CRDFV+  +    E   AA E
Sbjct: 53  IQGHKYTKEGSNKPPLINLANAQGGSYIFEFDSYSDLHVCRDFVSKVLEKSKETPNAALE 112

Query: 496 KPAVP-HDEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSEN 320
           K AV   DEQLS  EM  RIKLLQENSELQKLHRQ V G IL+EAEFWAARKKLL++  +
Sbjct: 113 KSAVKLPDEQLSEEEMQLRIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDRDPS 172

Query: 319 KKPKQRVALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMS 143
           KK KQRV  K+ M S ++P +DG+TN+VTF+LTPE+I QIFAEKPAV +A+LNFVP KM+
Sbjct: 173 KKSKQRVGFKSAMISDIRPATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKMT 232

Query: 142 EKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASE 5
           E EFWTKY RAEYL  TKN              AVFLK+DD+LA+E
Sbjct: 233 EMEFWTKYCRAEYLSRTKNYHAVVAEAAEDEELAVFLKEDDILANE 278


>ref|XP_006474796.1| PREDICTED: probable RNA polymerase II transcription factor B
           subunit 1-1-like [Citrus sinensis]
          Length = 597

 Score =  253 bits (645), Expect = 5e-65
 Identities = 138/226 (61%), Positives = 164/226 (72%), Gaps = 3/226 (1%)
 Frame = -3

Query: 673 IKGHKFSKEGSSKQALLNLTQDQGG-YIFEFDSFPDRDQCRDFVASAIAACMEVGKAASE 497
           I+GHK++KEGS+K  L+NL   QGG YIFEFDS+ D   CRDFV+  +    E   AA E
Sbjct: 53  IQGHKYTKEGSNKPPLINLANAQGGSYIFEFDSYADLHVCRDFVSKVLEKSKETPNAALE 112

Query: 496 KPAVP-HDEQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSEN 320
           K A+   DEQLS  EM  RIKLLQENSELQKLHRQ V G IL+EAEFWAARKKLL+   +
Sbjct: 113 KSAIKLPDEQLSEEEMQLRIKLLQENSELQKLHRQFVGGNILTEAEFWAARKKLLDIDPS 172

Query: 319 KKPKQRVALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMS 143
           KK KQRV  K+ M S ++P +DG+TN+VTF+LTPE+I QIFAEKPAV +A+LNFVP KM+
Sbjct: 173 KKSKQRVGFKSAMISDIRPATDGRTNKVTFSLTPEIILQIFAEKPAVHRAFLNFVPNKMT 232

Query: 142 EKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASE 5
           E EFWTKY RAEYL  TKN              AVFLK+DD+LA+E
Sbjct: 233 EMEFWTKYCRAEYLSRTKNYHAVVAEAAEDEELAVFLKEDDILANE 278


>ref|XP_006307068.1| hypothetical protein CARUB_v10008654mg [Capsella rubella]
           gi|482575779|gb|EOA39966.1| hypothetical protein
           CARUB_v10008654mg [Capsella rubella]
          Length = 593

 Score =  236 bits (601), Expect = 6e-60
 Identities = 128/226 (56%), Positives = 159/226 (70%), Gaps = 3/226 (1%)
 Frame = -3

Query: 673 IKGHKFSKEGSSKQALLNLTQDQG-GYIFEFDSFPDRDQCRDFVASAIAACMEVGKAASE 497
           IK  K++KEGS K A LNLT  QG  +IFEF ++PD   CRDF+  A+A C E       
Sbjct: 52  IKSQKYTKEGSQKPAWLNLTNKQGRSHIFEFGNYPDMHACRDFITKALAKCEE----EPN 107

Query: 496 KPAVPHD-EQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARKKLLEQSEN 320
           KPAVP   EQLS  E+  R KLL+ENSELQ+LH+Q V   +L+E EFWA RKKLL +   
Sbjct: 108 KPAVPASTEQLSIRELELRFKLLKENSELQRLHKQFVESKVLTEDEFWATRKKLLGKDSI 167

Query: 319 KKPKQRVALKNDMWS-VKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLNFVPGKMS 143
           +K KQ++ LK+ M S +KP +DG+TNRVTFNLTPE+I QIFAEKPAVRQA++++VP KM+
Sbjct: 168 RKSKQQLGLKSMMVSGIKPSTDGRTNRVTFNLTPEIIFQIFAEKPAVRQAFISYVPSKMT 227

Query: 142 EKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASE 5
           EK+FWTKY RAEYL+STKN              AVFLK D++LA E
Sbjct: 228 EKDFWTKYFRAEYLYSTKNTAVAAAEAAEDEELAVFLKPDEILARE 273


>gb|AFW61225.1| hypothetical protein ZEAMMB73_026868 [Zea mays]
          Length = 476

 Score =  235 bits (599), Expect = 1e-59
 Identities = 124/234 (52%), Positives = 159/234 (67%), Gaps = 10/234 (4%)
 Frame = -3

Query: 673 IKGHKFSKEGSSKQALLNLTQDQ--GGYIFEFDSFPDRDQCRDFVASAIAACMEVGKAAS 500
           IKGHKF+K   +K ALLNL+++   GGYIFEFD+  +RDQCRDFVA  +     +     
Sbjct: 50  IKGHKFNKVEGNKAALLNLSKEDKAGGYIFEFDNVGNRDQCRDFVARVLGKHQGI---VP 106

Query: 499 EKPAVPHD--------EQLSATEMGRRIKLLQENSELQKLHRQLVIGGILSEAEFWAARK 344
            +P V  +        EQLSA E+ RR+KLL+E+SELQKLH++ V+G IL E+EFWA RK
Sbjct: 107 PRPTVAPENSVASAALEQLSAAEVERRVKLLREDSELQKLHKKFVLGNILQESEFWATRK 166

Query: 343 KLLEQSENKKPKQRVALKNDMWSVKPLSDGQTNRVTFNLTPEVIHQIFAEKPAVRQAYLN 164
            LL+   NK+ KQ+   K+ +  ++P +DG+TN+VTF +TPE+IHQIFAEKPAVR+AYL+
Sbjct: 167 NLLDDEANKRSKQKPGFKSALVDIRPTTDGRTNKVTFQITPEMIHQIFAEKPAVRRAYLD 226

Query: 163 FVPGKMSEKEFWTKYSRAEYLHSTKNIVXXXXXXXXXXXXAVFLKQDDMLASEA 2
           FVP KMSE  FW KY RAEYL  TKN              A+FLK DD+LA EA
Sbjct: 227 FVPKKMSETRFWEKYCRAEYLVRTKNTAAATAEAAGDEELAIFLKNDDILAKEA 280