BLASTX nr result
ID: Atropa21_contig00026057
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00026057
(539 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 99 6e-19
ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation spec... 97 2e-18
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261... 93 4e-17
emb|CBI26830.3| unnamed protein product [Vitis vinifera] 93 4e-17
emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera] 93 4e-17
gb|EMJ24509.1| hypothetical protein PRUPE_ppa007296mg [Prunus pe... 91 2e-16
ref|XP_002312464.2| zinc finger family protein [Populus trichoca... 89 5e-16
gb|EXC54203.1| E3 ubiquitin protein ligase RIE1 [Morus notabilis] 89 8e-16
gb|EOY01100.1| Zinc finger isoform 2 [Theobroma cacao] 88 1e-15
gb|EOY01099.1| Zinc finger, C3HC4 type (RING finger) family prot... 88 1e-15
ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation spec... 87 2e-15
ref|XP_006448162.1| hypothetical protein CICLE_v10015731mg [Citr... 87 2e-15
ref|XP_006448161.1| hypothetical protein CICLE_v10015731mg [Citr... 87 2e-15
ref|XP_002314782.2| hypothetical protein POPTR_0010s11660g [Popu... 87 2e-15
ref|XP_002526000.1| cleavage and polyadenylation specificity fac... 87 2e-15
ref|XP_004150618.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 86 7e-15
ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation spec... 85 9e-15
ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 84 2e-14
gb|ADN33708.1| zinc finger protein [Cucumis melo subsp. melo] 84 2e-14
gb|ESW32424.1| hypothetical protein PHAVU_002G321300g [Phaseolus... 84 3e-14
>ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like [Solanum tuberosum]
Length = 948
Score = 99.0 bits (245), Expect = 6e-19
Identities = 43/47 (91%), Positives = 46/47 (97%)
Frame = +1
Query: 397 NVAKRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
++AKRCEY+NTMGSLLWWIVGFYWIVSGGEILLQNAP LYWLAVVFL
Sbjct: 759 SIAKRCEYMNTMGSLLWWIVGFYWIVSGGEILLQNAPHLYWLAVVFL 805
>ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Solanum lycopersicum]
Length = 1043
Score = 97.1 bits (240), Expect = 2e-18
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = +1
Query: 403 AKRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
AKRCEY+NTMGSLLWWI+GFYWIVSGGEILLQNAP LYWLAVVFL
Sbjct: 856 AKRCEYMNTMGSLLWWIIGFYWIVSGGEILLQNAPHLYWLAVVFL 900
>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 92.8 bits (229), Expect = 4e-17
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +1
Query: 385 FGHYNVAKRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
F +V KRCE VNTM S LWWIVGFYW+VSGGE LLQNAPRLYWLAVVFL
Sbjct: 2106 FNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVVFL 2156
>emb|CBI26830.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 92.8 bits (229), Expect = 4e-17
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +1
Query: 385 FGHYNVAKRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
F +V KRCE VNTM S LWWIVGFYW+VSGGE LLQNAPRLYWLAVVFL
Sbjct: 76 FNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVVFL 126
>emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]
Length = 361
Score = 92.8 bits (229), Expect = 4e-17
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = +1
Query: 385 FGHYNVAKRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
F +V KRCE VNTM S LWWIVGFYW+VSGGE LLQNAPRLYWLAVVFL
Sbjct: 162 FNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWLAVVFL 212
>gb|EMJ24509.1| hypothetical protein PRUPE_ppa007296mg [Prunus persica]
Length = 374
Score = 90.9 bits (224), Expect = 2e-16
Identities = 38/47 (80%), Positives = 44/47 (93%)
Frame = +1
Query: 397 NVAKRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
+++KRCE VNTM S LWWIVGFYW+V+GGE+LLQNAPRLYWLAVVFL
Sbjct: 185 SLSKRCETVNTMASFLWWIVGFYWVVAGGEVLLQNAPRLYWLAVVFL 231
>ref|XP_002312464.2| zinc finger family protein [Populus trichocarpa]
gi|550332992|gb|EEE89831.2| zinc finger family protein
[Populus trichocarpa]
Length = 351
Score = 89.4 bits (220), Expect = 5e-16
Identities = 38/47 (80%), Positives = 43/47 (91%)
Frame = +1
Query: 397 NVAKRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
+V KRCE VNTM S LWW+VGFYW+VSGG++LLQNAPRLYWLAVVFL
Sbjct: 161 SVTKRCESVNTMVSFLWWMVGFYWVVSGGDVLLQNAPRLYWLAVVFL 207
>gb|EXC54203.1| E3 ubiquitin protein ligase RIE1 [Morus notabilis]
Length = 428
Score = 88.6 bits (218), Expect = 8e-16
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = +1
Query: 388 GHYNVAKRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
G+ + KRCE VNTM S LWWIVGFYW+VSGG +LLQNAPRLYWL VVFL
Sbjct: 217 GYASFTKRCESVNTMVSFLWWIVGFYWVVSGGNVLLQNAPRLYWLTVVFL 266
>gb|EOY01100.1| Zinc finger isoform 2 [Theobroma cacao]
Length = 256
Score = 88.2 bits (217), Expect = 1e-15
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +1
Query: 397 NVAKRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
+V KRCE VNTM S LWWIVGFYW+VSGG LLQNAPRLYWLAVVFL
Sbjct: 171 SVTKRCESVNTMVSFLWWIVGFYWVVSGGNYLLQNAPRLYWLAVVFL 217
>gb|EOY01099.1| Zinc finger, C3HC4 type (RING finger) family protein isoform 1
[Theobroma cacao]
Length = 360
Score = 88.2 bits (217), Expect = 1e-15
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +1
Query: 397 NVAKRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
+V KRCE VNTM S LWWIVGFYW+VSGG LLQNAPRLYWLAVVFL
Sbjct: 171 SVTKRCESVNTMVSFLWWIVGFYWVVSGGNYLLQNAPRLYWLAVVFL 217
>ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Citrus sinensis]
Length = 1019
Score = 87.0 bits (214), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 406 KRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
KRCE +NTM S LWWIVGFYW+VSGG++LLQ+APRLYWLAVVFL
Sbjct: 832 KRCESINTMASFLWWIVGFYWVVSGGDLLLQDAPRLYWLAVVFL 875
>ref|XP_006448162.1| hypothetical protein CICLE_v10015731mg [Citrus clementina]
gi|557550773|gb|ESR61402.1| hypothetical protein
CICLE_v10015731mg [Citrus clementina]
Length = 359
Score = 87.0 bits (214), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 406 KRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
KRCE +NTM S LWWIVGFYW+VSGG++LLQ+APRLYWLAVVFL
Sbjct: 172 KRCESINTMASFLWWIVGFYWVVSGGDLLLQDAPRLYWLAVVFL 215
>ref|XP_006448161.1| hypothetical protein CICLE_v10015731mg [Citrus clementina]
gi|557550772|gb|ESR61401.1| hypothetical protein
CICLE_v10015731mg [Citrus clementina]
Length = 259
Score = 87.0 bits (214), Expect = 2e-15
Identities = 36/44 (81%), Positives = 41/44 (93%)
Frame = +1
Query: 406 KRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
KRCE +NTM S LWWIVGFYW+VSGG++LLQ+APRLYWLAVVFL
Sbjct: 172 KRCESINTMASFLWWIVGFYWVVSGGDLLLQDAPRLYWLAVVFL 215
>ref|XP_002314782.2| hypothetical protein POPTR_0010s11660g [Populus trichocarpa]
gi|550329589|gb|EEF00953.2| hypothetical protein
POPTR_0010s11660g [Populus trichocarpa]
Length = 327
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/44 (86%), Positives = 40/44 (90%)
Frame = +1
Query: 406 KRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
KRCE VNTM S LWWIVGFYW+VSGG+ LLQNAPRLYWLAVVFL
Sbjct: 139 KRCESVNTMVSFLWWIVGFYWVVSGGDALLQNAPRLYWLAVVFL 182
>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis] gi|223534732|gb|EEF36424.1| cleavage and
polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 87.0 bits (214), Expect = 2e-15
Identities = 38/47 (80%), Positives = 41/47 (87%)
Frame = +1
Query: 397 NVAKRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
+V KRCE VNTM S LWWIVGFYW+VSGG+ LLQNAP LYWLAVVFL
Sbjct: 773 SVIKRCESVNTMASFLWWIVGFYWVVSGGDELLQNAPHLYWLAVVFL 819
>ref|XP_004150618.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449523519|ref|XP_004168771.1| PREDICTED: E3 ubiquitin
protein ligase RIE1-like [Cucumis sativus]
Length = 356
Score = 85.5 bits (210), Expect = 7e-15
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +1
Query: 397 NVAKRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
+VAKRCE VNTM SL+WW+ GFYW+V+GG IL+QNAP LYWLAVVFL
Sbjct: 169 SVAKRCESVNTMVSLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFL 215
>ref|XP_004298504.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Fragaria vesca subsp. vesca]
Length = 1009
Score = 85.1 bits (209), Expect = 9e-15
Identities = 36/47 (76%), Positives = 43/47 (91%)
Frame = +1
Query: 397 NVAKRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
+V+KRCE +NTM S LWWIVGFYW+VSGG+ LLQ+APRLYWL+VVFL
Sbjct: 820 SVSKRCESINTMVSFLWWIVGFYWVVSGGDRLLQDAPRLYWLSVVFL 866
>ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 357
Score = 84.3 bits (207), Expect = 2e-14
Identities = 37/45 (82%), Positives = 41/45 (91%)
Frame = +1
Query: 403 AKRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
AKRCE +NT S LWWIVGFYW+VSGG+ILLQ+APRLYWLAVVFL
Sbjct: 169 AKRCESLNTGVSFLWWIVGFYWVVSGGDILLQDAPRLYWLAVVFL 213
>gb|ADN33708.1| zinc finger protein [Cucumis melo subsp. melo]
Length = 356
Score = 84.3 bits (207), Expect = 2e-14
Identities = 35/47 (74%), Positives = 42/47 (89%)
Frame = +1
Query: 397 NVAKRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
+VAKRCE VNT+ SL+WW+ GFYW+V+GG IL+QNAP LYWLAVVFL
Sbjct: 169 SVAKRCESVNTLVSLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFL 215
>gb|ESW32424.1| hypothetical protein PHAVU_002G321300g [Phaseolus vulgaris]
Length = 345
Score = 83.6 bits (205), Expect = 3e-14
Identities = 35/44 (79%), Positives = 41/44 (93%)
Frame = +1
Query: 406 KRCEYVNTMGSLLWWIVGFYWIVSGGEILLQNAPRLYWLAVVFL 537
KRC +NTM SLLWW+VGFYW+VSGG++LLQ+APRLYWLAVVFL
Sbjct: 158 KRCTSLNTMVSLLWWMVGFYWVVSGGDVLLQDAPRLYWLAVVFL 201