BLASTX nr result
ID: Atropa21_contig00025932
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00025932 (470 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006348431.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 93 4e-17 ref|XP_006348430.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 93 4e-17 ref|XP_004228649.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 77 2e-12 ref|XP_006339182.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A... 56 4e-06 >ref|XP_006348431.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X2 [Solanum tuberosum] Length = 366 Score = 92.8 bits (229), Expect = 4e-17 Identities = 49/64 (76%), Positives = 55/64 (85%) Frame = -3 Query: 468 GIANVSRMMERLETRENRTDNNIVDRSNTDQRQNDNVVTHNGSRLNGNNSTTFSASSARN 289 G A+VSRMME LET+EN+TDNNI SN++QR NDN+V HNGSRLNGNNSTT SASSARN Sbjct: 305 GTASVSRMMEHLETQENQTDNNIP--SNSEQRLNDNMVAHNGSRLNGNNSTTSSASSARN 362 Query: 288 *VII 277 VII Sbjct: 363 EVII 366 >ref|XP_006348430.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X1 [Solanum tuberosum] Length = 367 Score = 92.8 bits (229), Expect = 4e-17 Identities = 49/64 (76%), Positives = 55/64 (85%) Frame = -3 Query: 468 GIANVSRMMERLETRENRTDNNIVDRSNTDQRQNDNVVTHNGSRLNGNNSTTFSASSARN 289 G A+VSRMME LET+EN+TDNNI SN++QR NDN+V HNGSRLNGNNSTT SASSARN Sbjct: 306 GTASVSRMMEHLETQENQTDNNIP--SNSEQRLNDNMVAHNGSRLNGNNSTTSSASSARN 363 Query: 288 *VII 277 VII Sbjct: 364 EVII 367 >ref|XP_004228649.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Solanum lycopersicum] Length = 342 Score = 77.0 bits (188), Expect = 2e-12 Identities = 40/55 (72%), Positives = 44/55 (80%) Frame = -3 Query: 453 SRMMERLETRENRTDNNIVDRSNTDQRQNDNVVTHNGSRLNGNNSTTFSASSARN 289 S M +LETREN TDNNI SN +QR ND++V HNGSRLNGNNSTT SASSARN Sbjct: 290 STSMGQLETRENNTDNNIP--SNVEQRHNDDMVAHNGSRLNGNNSTTSSASSARN 342 >ref|XP_006339182.1| PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Solanum tuberosum] Length = 383 Score = 56.2 bits (134), Expect = 4e-06 Identities = 35/66 (53%), Positives = 43/66 (65%), Gaps = 6/66 (9%) Frame = -3 Query: 468 GIANVSRMMERLETREN------RTDNNIVDRSNTDQRQNDNVVTHNGSRLNGNNSTTFS 307 GIA++S +MERLETREN NIVD S T QR + N+ TH G+ LN NST + Sbjct: 319 GIASLSHLMERLETRENSRAGSVSAVTNIVDSSRTLQRDHGNMGTHIGNGLN-RNSTASA 377 Query: 306 ASSARN 289 ASSA+N Sbjct: 378 ASSAQN 383