BLASTX nr result
ID: Atropa21_contig00025793
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00025793 (516 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_006358629.1| PREDICTED: decapping nuclease Dom3z homolog,... 60 3e-07 ref|XP_004245834.1| PREDICTED: protein Dom3z homolog, chloroplas... 60 3e-07 gb|EMT12303.1| hypothetical protein F775_04838 [Aegilops tauschii] 56 6e-06 >ref|XP_006358629.1| PREDICTED: decapping nuclease Dom3z homolog, chloroplastic-like [Solanum tuberosum] Length = 552 Score = 60.1 bits (144), Expect = 3e-07 Identities = 35/68 (51%), Positives = 36/68 (52%) Frame = +3 Query: 3 DLGSQGFGDLLASIRNKNIPLDRMHFVVRIFCLFNSLSELHVFGS*FNGGLLFSFSLCQT 182 DLGSQGFGDLLASIRNKNIPLDRMHFV T Sbjct: 281 DLGSQGFGDLLASIRNKNIPLDRMHFV--------------------------------T 308 Query: 183 YRNNLNKV 206 YRNNLNK+ Sbjct: 309 YRNNLNKI 316 >ref|XP_004245834.1| PREDICTED: protein Dom3z homolog, chloroplastic-like [Solanum lycopersicum] Length = 554 Score = 60.1 bits (144), Expect = 3e-07 Identities = 35/68 (51%), Positives = 36/68 (52%) Frame = +3 Query: 3 DLGSQGFGDLLASIRNKNIPLDRMHFVVRIFCLFNSLSELHVFGS*FNGGLLFSFSLCQT 182 DLGSQGFGDLLASIRNKNIPLDRMHFV T Sbjct: 286 DLGSQGFGDLLASIRNKNIPLDRMHFV--------------------------------T 313 Query: 183 YRNNLNKV 206 YRNNLNK+ Sbjct: 314 YRNNLNKI 321 >gb|EMT12303.1| hypothetical protein F775_04838 [Aegilops tauschii] Length = 680 Score = 55.8 bits (133), Expect = 6e-06 Identities = 33/68 (48%), Positives = 40/68 (58%) Frame = +3 Query: 3 DLGSQGFGDLLASIRNKNIPLDRMHFVVRIFCLFNSLSELHVFGS*FNGGLLFSFSLCQT 182 DLGSQGFGDLLA IRN N+PL +HFVV+ C+ + F F + T Sbjct: 385 DLGSQGFGDLLACIRNSNLPLQNIHFVVK--CIIAN----------------FIFVIL-T 425 Query: 183 YRNNLNKV 206 YRNNLNK+ Sbjct: 426 YRNNLNKI 433