BLASTX nr result

ID: Atropa21_contig00025761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00025761
         (556 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343776.1| PREDICTED: growth-regulating factor 8-like [...   234   1e-59
ref|XP_004246083.1| PREDICTED: growth-regulating factor 8-like [...   197   2e-48

>ref|XP_006343776.1| PREDICTED: growth-regulating factor 8-like [Solanum tuberosum]
          Length = 422

 Score =  234 bits (597), Expect = 1e-59
 Identities = 130/194 (67%), Positives = 140/194 (72%), Gaps = 9/194 (4%)
 Frame = +1

Query: 1   HPPTPKS------NNHHHPPTPKSNNHHHSFQFPTVQLSAPLSDQN--RCIEWLGRGDRS 156
           H   P+S      + + HPP PKSNN+ HSFQFPTVQLSAP  DQ   RCIEWLGRGD S
Sbjct: 164 HKSKPRSRKPVEIHTNRHPPIPKSNNNSHSFQFPTVQLSAPSGDQTSPRCIEWLGRGDTS 223

Query: 157 GTIPVV-TCNNKQNLQQLMQSSSRMGFNIDHTDQNRRNSPAFQVQDEAKVYPMSFNQYMI 333
            TIPVV TCN     QQLM SSS MGFN    DQNRRNSPAFQVQD  KVYPM+FNQYM 
Sbjct: 224 RTIPVVNTCN-----QQLMHSSSGMGFN---NDQNRRNSPAFQVQDAPKVYPMNFNQYMC 275

Query: 334 NSSSGHTLESQFKNEQCNDSVIASLQGRVTTKDLVDGWSKDGFNDGISNNDSFTSLTLSM 513
           NSSS   L SQ KNEQ N+S+I    GR TT+   + W KDG +DGISNN SFTSLTLSM
Sbjct: 276 NSSSDQALGSQLKNEQGNNSII----GRGTTR---NAWPKDGLSDGISNNGSFTSLTLSM 328

Query: 514 SGWNHGMDDDNEHA 555
           SGWN GMDDDNEHA
Sbjct: 329 SGWNRGMDDDNEHA 342


>ref|XP_004246083.1| PREDICTED: growth-regulating factor 8-like [Solanum lycopersicum]
          Length = 398

 Score =  197 bits (500), Expect = 2e-48
 Identities = 115/184 (62%), Positives = 126/184 (68%)
 Frame = +1

Query: 4   PPTPKSNNHHHPPTPKSNNHHHSFQFPTVQLSAPLSDQNRCIEWLGRGDRSGTIPVVTCN 183
           P + K    H  P+PKSNN H SFQFPTVQ   P +DQ RCIEWLGRGD  GTIPV    
Sbjct: 160 PRSRKPVEIHTNPSPKSNNRH-SFQFPTVQ---PSNDQTRCIEWLGRGDTCGTIPVDDNC 215

Query: 184 NKQNLQQLMQSSSRMGFNIDHTDQNRRNSPAFQVQDEAKVYPMSFNQYMINSSSGHTLES 363
           NKQ    LMQS   +GFN        RNSPAFQVQ E K+YPM+FNQYM NSSS   L S
Sbjct: 216 NKQ----LMQS---IGFNT-------RNSPAFQVQHEPKLYPMNFNQYMCNSSSDQALAS 261

Query: 364 QFKNEQCNDSVIASLQGRVTTKDLVDGWSKDGFNDGISNNDSFTSLTLSMSGWNHGMDDD 543
           Q KNE CN+S+IASLQGR TT    + W K    DGIS+N SFTSLTLSMSGWN GMDDD
Sbjct: 262 QLKNEHCNNSIIASLQGRGTTS---NAWPK----DGISSNGSFTSLTLSMSGWNGGMDDD 314

Query: 544 NEHA 555
           N+HA
Sbjct: 315 NKHA 318


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