BLASTX nr result
ID: Atropa21_contig00025536
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00025536
(637 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006433264.1| hypothetical protein CICLE_v10003460mg [Citr... 70 7e-10
ref|XP_006433267.1| hypothetical protein CICLE_v10003828mg [Citr... 68 2e-09
gb|EOY11412.1| Nucleotide repair protein, putative isoform 4, pa... 68 3e-09
gb|EOY11409.1| DNA excision repair protein ERCC-1 isoform 1 [The... 68 3e-09
ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-... 67 6e-09
ref|XP_002512344.1| excision repair cross-complementing 1 ercc1,... 66 7e-09
gb|ESW16746.1| hypothetical protein PHAVU_007G181700g [Phaseolus... 65 1e-08
gb|ESW16745.1| hypothetical protein PHAVU_007G181700g [Phaseolus... 65 1e-08
ref|XP_006433265.1| hypothetical protein CICLE_v10003373mg, part... 65 1e-08
gb|EXB56542.1| DNA excision repair protein ERCC-1 [Morus notabilis] 65 2e-08
ref|XP_006589150.1| PREDICTED: DNA excision repair protein ERCC-... 65 2e-08
ref|XP_006345166.1| PREDICTED: DNA excision repair protein ERCC-... 65 2e-08
ref|XP_004302450.1| PREDICTED: DNA excision repair protein ERCC-... 65 2e-08
gb|EMJ06496.1| hypothetical protein PRUPE_ppa006720mg [Prunus pe... 65 2e-08
ref|XP_004235989.1| PREDICTED: DNA excision repair protein ERCC-... 65 2e-08
emb|CAA05781.1| nucleotide repair protein [Lilium longiflorum] 65 2e-08
ref|XP_006472001.1| PREDICTED: DNA excision repair protein ERCC-... 64 3e-08
ref|XP_002328427.1| predicted protein [Populus trichocarpa] gi|5... 64 3e-08
ref|XP_006471950.1| PREDICTED: DNA excision repair protein ERCC-... 64 4e-08
ref|XP_006433263.1| hypothetical protein CICLE_v10001229mg [Citr... 64 4e-08
>ref|XP_006433264.1| hypothetical protein CICLE_v10003460mg [Citrus clementina]
gi|557535386|gb|ESR46504.1| hypothetical protein
CICLE_v10003460mg [Citrus clementina]
Length = 199
Score = 69.7 bits (169), Expect = 7e-10
Identities = 32/41 (78%), Positives = 35/41 (85%)
Frame = +3
Query: 513 MQKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYLRFEVL 635
MQKGNPLLKHI VR FAD+VC YLLGQN+CALYLR E+L
Sbjct: 1 MQKGNPLLKHITYVRWAFADVVCDYLLGQNSCALYLRLELL 41
>ref|XP_006433267.1| hypothetical protein CICLE_v10003828mg [Citrus clementina]
gi|557535389|gb|ESR46507.1| hypothetical protein
CICLE_v10003828mg [Citrus clementina]
Length = 304
Score = 68.2 bits (165), Expect = 2e-09
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = +3
Query: 516 QKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
QKGNPLLKH+RN+R FAD+VCGYLLGQN+CALYL
Sbjct: 40 QKGNPLLKHLRNMRWAFADVVCGYLLGQNSCALYL 74
>gb|EOY11412.1| Nucleotide repair protein, putative isoform 4, partial [Theobroma
cacao]
Length = 298
Score = 67.8 bits (164), Expect = 3e-09
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +3
Query: 516 QKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
QKGNPLLKHIRNVR FADIVC YLLGQN+CALYL
Sbjct: 38 QKGNPLLKHIRNVRWAFADIVCDYLLGQNSCALYL 72
>gb|EOY11409.1| DNA excision repair protein ERCC-1 isoform 1 [Theobroma cacao]
Length = 409
Score = 67.8 bits (164), Expect = 3e-09
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +3
Query: 516 QKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
QKGNPLLKHIRNVR FADIVC YLLGQN+CALYL
Sbjct: 125 QKGNPLLKHIRNVRWAFADIVCDYLLGQNSCALYL 159
>ref|XP_002281063.2| PREDICTED: DNA excision repair protein ERCC-1-like [Vitis vinifera]
gi|296088298|emb|CBI36743.3| unnamed protein product
[Vitis vinifera]
Length = 398
Score = 66.6 bits (161), Expect = 6e-09
Identities = 31/35 (88%), Positives = 32/35 (91%)
Frame = +3
Query: 516 QKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
QKGNPLLKHIRNVR FADIVC YLLGQN+CALYL
Sbjct: 114 QKGNPLLKHIRNVRWDFADIVCDYLLGQNSCALYL 148
>ref|XP_002512344.1| excision repair cross-complementing 1 ercc1, putative [Ricinus
communis] gi|223548305|gb|EEF49796.1| excision repair
cross-complementing 1 ercc1, putative [Ricinus communis]
Length = 392
Score = 66.2 bits (160), Expect = 7e-09
Identities = 30/42 (71%), Positives = 34/42 (80%)
Frame = +3
Query: 495 SVISILMQKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
S++ QKGNPLLKHIRNVR FAD+VC YLLGQN C+LYL
Sbjct: 102 SILVSHRQKGNPLLKHIRNVRWAFADVVCDYLLGQNCCSLYL 143
>gb|ESW16746.1| hypothetical protein PHAVU_007G181700g [Phaseolus vulgaris]
Length = 276
Score = 65.5 bits (158), Expect = 1e-08
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +3
Query: 495 SVISILMQKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
S++ QKGNPLLKHIRNVR FADIVC Y+LGQ++CALYL
Sbjct: 113 SILVSHRQKGNPLLKHIRNVRWAFADIVCDYMLGQSSCALYL 154
>gb|ESW16745.1| hypothetical protein PHAVU_007G181700g [Phaseolus vulgaris]
Length = 393
Score = 65.5 bits (158), Expect = 1e-08
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = +3
Query: 495 SVISILMQKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
S++ QKGNPLLKHIRNVR FADIVC Y+LGQ++CALYL
Sbjct: 113 SILVSHRQKGNPLLKHIRNVRWAFADIVCDYMLGQSSCALYL 154
>ref|XP_006433265.1| hypothetical protein CICLE_v10003373mg, partial [Citrus clementina]
gi|557535387|gb|ESR46505.1| hypothetical protein
CICLE_v10003373mg, partial [Citrus clementina]
Length = 262
Score = 65.5 bits (158), Expect = 1e-08
Identities = 30/40 (75%), Positives = 33/40 (82%)
Frame = +3
Query: 516 QKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYLRFEVL 635
QKGNPLLKHIRN+R FAD+VCG LLGQN+CALYL L
Sbjct: 40 QKGNPLLKHIRNMRWAFADVVCGDLLGQNSCALYLSIREL 79
>gb|EXB56542.1| DNA excision repair protein ERCC-1 [Morus notabilis]
Length = 407
Score = 65.1 bits (157), Expect = 2e-08
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +3
Query: 516 QKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
QKGNPLLKHIRNVR FAD+VC YLLGQ +CALYL
Sbjct: 127 QKGNPLLKHIRNVRWAFADVVCDYLLGQGSCALYL 161
>ref|XP_006589150.1| PREDICTED: DNA excision repair protein ERCC-1-like [Glycine max]
Length = 393
Score = 65.1 bits (157), Expect = 2e-08
Identities = 29/42 (69%), Positives = 35/42 (83%)
Frame = +3
Query: 495 SVISILMQKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
S++ QKGNPLLKHIRNVR FAD+VC Y+LGQ++CALYL
Sbjct: 102 SILVSHRQKGNPLLKHIRNVRWAFADVVCDYMLGQSSCALYL 143
>ref|XP_006345166.1| PREDICTED: DNA excision repair protein ERCC-1-like [Solanum
tuberosum]
Length = 392
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = +3
Query: 516 QKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
QKGNPLLKHIRNVR FADIVC YLLG N CALYL
Sbjct: 111 QKGNPLLKHIRNVRWTFADIVCDYLLGPNTCALYL 145
>ref|XP_004302450.1| PREDICTED: DNA excision repair protein ERCC-1-like [Fragaria vesca
subsp. vesca]
Length = 380
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +3
Query: 516 QKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
QKGNPLLKHIRNVR FADIVC YLLGQ++CALYL
Sbjct: 109 QKGNPLLKHIRNVRWEFADIVCDYLLGQSSCALYL 143
>gb|EMJ06496.1| hypothetical protein PRUPE_ppa006720mg [Prunus persica]
Length = 398
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/35 (85%), Positives = 32/35 (91%)
Frame = +3
Query: 516 QKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
QKGNPLLKHIRNVR FADIVC YLLGQ++CALYL
Sbjct: 122 QKGNPLLKHIRNVRWEFADIVCDYLLGQSSCALYL 156
>ref|XP_004235989.1| PREDICTED: DNA excision repair protein ERCC-1-like [Solanum
lycopersicum]
Length = 390
Score = 65.1 bits (157), Expect = 2e-08
Identities = 30/35 (85%), Positives = 30/35 (85%)
Frame = +3
Query: 516 QKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
QKGNPLLKHIRNVR FADIVC YLLG N CALYL
Sbjct: 108 QKGNPLLKHIRNVRWTFADIVCDYLLGPNTCALYL 142
>emb|CAA05781.1| nucleotide repair protein [Lilium longiflorum]
Length = 278
Score = 65.1 bits (157), Expect = 2e-08
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = +3
Query: 516 QKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
QKGNPLLKHIRNV+ VFADIVC YL+GQ++CALYL
Sbjct: 39 QKGNPLLKHIRNVKWVFADIVCDYLVGQSSCALYL 73
>ref|XP_006472001.1| PREDICTED: DNA excision repair protein ERCC-1-like isoform X1
[Citrus sinensis]
Length = 335
Score = 64.3 bits (155), Expect = 3e-08
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +3
Query: 519 KGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
KGNPLLKHIRN+R FAD+VC YLLGQN+CALYL
Sbjct: 56 KGNPLLKHIRNMRWAFADVVCDYLLGQNSCALYL 89
>ref|XP_002328427.1| predicted protein [Populus trichocarpa]
gi|566169303|ref|XP_006382624.1| hypothetical protein
POPTR_0005s03890g [Populus trichocarpa]
gi|550337988|gb|ERP60421.1| hypothetical protein
POPTR_0005s03890g [Populus trichocarpa]
Length = 382
Score = 64.3 bits (155), Expect = 3e-08
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = +3
Query: 516 QKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
QKGNPLLKHIRNV+ FAD+VC YLLGQ++CALYL
Sbjct: 103 QKGNPLLKHIRNVKWAFADVVCDYLLGQSSCALYL 137
>ref|XP_006471950.1| PREDICTED: DNA excision repair protein ERCC-1-like [Citrus
sinensis]
Length = 394
Score = 63.9 bits (154), Expect = 4e-08
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = +3
Query: 516 QKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
QKGNPLLK+IRNVR FAD+VC YL+GQN+CALYL
Sbjct: 114 QKGNPLLKYIRNVRWAFADVVCDYLVGQNSCALYL 148
>ref|XP_006433263.1| hypothetical protein CICLE_v10001229mg [Citrus clementina]
gi|557535385|gb|ESR46503.1| hypothetical protein
CICLE_v10001229mg [Citrus clementina]
Length = 430
Score = 63.9 bits (154), Expect = 4e-08
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = +3
Query: 516 QKGNPLLKHIRNVRSVFADIVCGYLLGQNACALYL 620
QKGNPLLK+IRNVR FAD+VC YL+GQN+CALYL
Sbjct: 150 QKGNPLLKYIRNVRWAFADVVCDYLVGQNSCALYL 184