BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00025439
         (919 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268...   256   1e-70
emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga...   251   4e-67
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...   246   2e-64
ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256...   204   1e-53
gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas...   209   2e-51
ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulg...   209   2e-51
ref|XP_004239600.1| PREDICTED: uncharacterized protein LOC101264...   200   5e-49
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]       181   1e-45
emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li...   182   1e-43
gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,...   174   1e-43
dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ...   181   4e-43
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664...   169   2e-42
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                175   2e-42
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298...   175   4e-42
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...   175   2e-41
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   175   2e-41
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...   165   9e-40
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]           165   9e-40
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               169   1e-39
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...   169   2e-39

>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
            lycopersicum]
          Length = 717

 Score =  256 bits (654), Expect(2) = 1e-70
 Identities = 125/220 (56%), Positives = 163/220 (74%)
 Frame = +3

Query: 186  IMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVKWIFL 365
            ++  II   QAGFIPGRKIG+N+ILAHELV+AY RK++   CM+KIDL K YDSV+W FL
Sbjct: 346  VIHTIISDSQAGFIPGRKIGDNIILAHELVKAYTRKNVSPRCMLKIDLHKAYDSVEWPFL 405

Query: 366  QQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFAICME 545
            +Q++E L F + F  W+++CVKTVNYTI++NG+ T  FDA KGLR  D +S FLFAI ME
Sbjct: 406  EQVMEGLGFPDLFTKWVMKCVKTVNYTIVVNGQNTQRFDAAKGLRQGDPMSPFLFAIAME 465

Query: 546  YLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNFSMAS 725
            YLSR L GL+ +  F+Y PK +K+ +THL FADDLLLF++ +L S+KA+  CF  FS AS
Sbjct: 466  YLSRLLKGLKEDKSFKYHPKYAKLDVTHLCFADDLLLFSRGDLNSIKALQKCFTEFSQAS 525

Query: 726  GLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
            GLQ NL+K+S+Y GGV    +  I+  LG+   +LPFK L
Sbjct: 526  GLQANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYL 565



 Score = 38.1 bits (87), Expect(2) = 1e-70
 Identities = 16/31 (51%), Positives = 24/31 (77%)
 Frame = +2

Query: 827 LAF*VLDIPLSTRKISIIQWKPLTDKIVARI 919
           L F  L +PLS++K++ IQW PL +K++ARI
Sbjct: 560 LPFKYLGVPLSSKKLNTIQWYPLIEKVMARI 590


>emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1114

 Score =  251 bits (642), Expect(2) = 4e-67
 Identities = 125/284 (44%), Positives = 185/284 (65%), Gaps = 3/284 (1%)
 Frame = +3

Query: 3    DVSEAIKEFFHTDKIFKAINCSTITLIPKIDKPK---TIRL*IYCLLHYSL*IDFQILTN 173
            ++ E I +FF    + K INC+ +TLIPKID+ K     R    C   Y   I  +ILT 
Sbjct: 479  EIYEGILDFFENGFMHKPINCTAVTLIPKIDEAKHAKDYRPIACCSTLYK--IISKILTK 536

Query: 174  RLQKIMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVK 353
            RLQ ++  ++   Q GFIP R IG+N++LA EL++ Y R+H+   C+IK+D++K YDSV+
Sbjct: 537  RLQAVITEVVDCAQTGFIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVE 596

Query: 354  WIFLQQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFA 533
            W+FL+ +L++L F + FI W++ CVKTV+Y+IL+NG  ++PFDA KGLR  D +S FLFA
Sbjct: 597  WVFLESMLKELGFPSMFIRWIMACVKTVSYSILLNGIPSIPFDAQKGLRQGDPLSPFLFA 656

Query: 534  ICMEYLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNF 713
            + MEYLSRC+  +  +P+F + PKC ++ +THL FADDLL+F + +  S+  I + F +F
Sbjct: 657  LSMEYLSRCMGNMCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSF 716

Query: 714  SMASGLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
            S ASGLQ ++ K+ +Y GGV       +   +      LPF+ L
Sbjct: 717  SKASGLQASIEKSCIYFGGVCHEEAEQLADRIQMPIGSLPFRYL 760



 Score = 31.2 bits (69), Expect(2) = 4e-67
 Identities = 14/30 (46%), Positives = 20/30 (66%)
 Frame = +2

Query: 827 LAF*VLDIPLSTRKISIIQWKPLTDKIVAR 916
           L F  L +PL+++K++  Q KPL DKI  R
Sbjct: 755 LPFRYLGVPLASKKLNFSQCKPLIDKITTR 784


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score =  246 bits (629), Expect(2) = 2e-64
 Identities = 120/284 (42%), Positives = 186/284 (65%), Gaps = 3/284 (1%)
 Frame = +3

Query: 3    DVSEAIKEFFHTDKIFKAINCSTITLIPKID---KPKTIRL*IYCLLHYSL*IDFQILTN 173
            ++   I+EFF+  ++ + INC  +TL+PK+    + K  R    C + Y   I  ++LTN
Sbjct: 476  EIYAGIQEFFNNSRMHRPINCIVVTLLPKVQHATRVKEFRPIACCTVIYK--IISKMLTN 533

Query: 174  RLQKIMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVK 353
            R++ I+  ++   Q+GFIPGR I +N++LA EL++ Y RKH+   C++K+D++K YDSV+
Sbjct: 534  RMKGIIGEVVNEAQSGFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVE 593

Query: 354  WIFLQQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFA 533
            W FL+ +L +  F ++F+ W++ECV TV+Y++L+NG  T PF A KGLR  D +S FLFA
Sbjct: 594  WSFLETLLYEFGFPSRFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFA 653

Query: 534  ICMEYLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNF 713
            +CMEYLSRCL  L+ +PDF + PKC ++ ITHL FADDLL+F + +  S+  +   F  F
Sbjct: 654  LCMEYLSRCLEELKGSPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKF 713

Query: 714  SMASGLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
            S ASGL  +  K+++Y  GV+  +   +  Y+     +LPF+ L
Sbjct: 714  SHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYL 757



 Score = 26.9 bits (58), Expect(2) = 2e-64
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 827 LAF*VLDIPLSTRKISIIQWKPLTDKIVAR 916
           L F  L +PL+++K++  Q KPL + I  R
Sbjct: 752 LPFRYLGVPLTSKKLTYAQCKPLVEMITNR 781


>ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256917 [Solanum
           lycopersicum]
          Length = 421

 Score =  204 bits (518), Expect(2) = 1e-53
 Identities = 112/284 (39%), Positives = 161/284 (56%), Gaps = 3/284 (1%)
 Frame = +3

Query: 3   DVSEAIKEFFHTDKIFKAINCSTITLIPKIDKPKTI---RL*IYCLLHYSL*IDFQILTN 173
           D+ E ++ FF   K+FK  NC+ ++LIPK+  PK +   R    C + Y   I  +++TN
Sbjct: 144 DIIEVVQSFFKPGKLFKPFNCTLVSLIPKVQSPKNVKEYRTITCCTVLYK--IISKVITN 201

Query: 174 RLQKIMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVK 353
           R+  ++ ++IC  Q GFI GRKI EN++LAHELV +Y RK+I    M+KIDLQKVYDSV+
Sbjct: 202 RMHDVIHNVICDSQVGFILGRKISENILLAHELVNSYTRKNISPRSMLKIDLQKVYDSVE 261

Query: 354 WIFLQQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFA 533
           W FL+Q++  L F + F  W++ CVKTVNYTI++NG+ T  FDA +              
Sbjct: 262 WPFLKQVMVGLGFPDMFTQWVMHCVKTVNYTIVVNGQTTQRFDAAR-------------- 307

Query: 534 ICMEYLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNF 713
                L  C                           ++LLLF++ +L S+KA+  CFL F
Sbjct: 308 -----LFYCY--------------------------NNLLLFSRGDLNSIKALKGCFLEF 336

Query: 714 SMASGLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
           S ASG Q NL+K+S+Y GGV    +  I+  L +   ++PFK L
Sbjct: 337 SQASGQQANLNKSSIYCGGVQMEVRQQIVRQLHYKMEEIPFKYL 380



 Score = 33.9 bits (76), Expect(2) = 1e-53
 Identities = 13/27 (48%), Positives = 21/27 (77%)
 Frame = +2

Query: 827 LAF*VLDIPLSTRKISIIQWKPLTDKI 907
           + F  L +PLS++K+SI+QW PL +K+
Sbjct: 375 IPFKYLGVPLSSKKLSILQWYPLIEKL 401


>gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 402

 Score =  209 bits (531), Expect = 2e-51
 Identities = 107/243 (44%), Positives = 161/243 (66%), Gaps = 3/243 (1%)
 Frame = +3

Query: 6   VSEAIKEFFHTDKIFKAINCSTITLIPK---IDKPKTIRL*IYCLLHYSL*IDFQILTNR 176
           V +AI +FF T  + K INC+ +TL+PK   +   K  R    C + Y   I  +ILT+R
Sbjct: 160 VIDAILDFFKTGFMPKIINCTYMTLLPKEVNVTSVKNFRPIACCSVIYK--IISKILTSR 217

Query: 177 LQKIMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVKW 356
           +Q ++  ++   Q+ F+ GR I +N+IL+HELV++Y RK I   CM+KIDLQK Y+SV+W
Sbjct: 218 MQGVLNSVVSENQSAFVKGRVIFDNIILSHELVKSYSRKGISPRCMVKIDLQKAYNSVEW 277

Query: 357 IFLQQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFAI 536
            F++ ++ +L F  KF++W++ C+ T +YT  ING+LT PF A KGLR  D IS +LF I
Sbjct: 278 PFIKHLMLELGFSYKFVNWVMGCLTTASYTFNINGDLTRPFAAKKGLRQGDPISPYLFVI 337

Query: 537 CMEYLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNFS 716
           CMEYL+ CL+ L+ N  F++ P+C ++ + H+ F DDLLLF++ ++ SV  ++  F  FS
Sbjct: 338 CMEYLNICLIQLRKNAAFRFHPRCKRLNLIHVCFVDDLLLFSRGDVDSVSQLFEAFSLFS 397

Query: 717 MAS 725
            AS
Sbjct: 398 AAS 400


>ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulgaris subsp. maritima]
           gi|346683183|ref|YP_004842114.1| hypothetical protein
           BemaM_p069 [Beta macrocarpa]
           gi|319439824|emb|CBX33299.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500101|emb|CBX24919.1|
           hypothetical protein [Beta macrocarpa]
          Length = 238

 Score =  209 bits (531), Expect = 2e-51
 Identities = 105/230 (45%), Positives = 154/230 (66%), Gaps = 10/230 (4%)
 Frame = +3

Query: 186 IMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVKWIFL 365
           ++  +I   QAGFIPG+ IG+N++LA EL++ Y +K +   CMIK+DL+K YDS++W FL
Sbjct: 4   VIGEVINEAQAGFIPGKHIGDNILLATELIKGYSQKAVSPRCMIKVDLRKAYDSIEWSFL 63

Query: 366 QQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFAICME 545
           Q +L +L F ++FI+W++ECV TV+Y+IL+NG+ T PF + KG+R  D +S FLFAI ME
Sbjct: 64  QCMLSELGFPSQFITWIMECVTTVSYSILLNGKPTTPFPSKKGVRQGDPMSPFLFAIGME 123

Query: 546 YLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCF------- 704
           YLSRCL+ L  NP+F Y P+C K+ ITH+ FA DLLLF++ + +SV  +Y  F       
Sbjct: 124 YLSRCLLELTLNPNFNYHPRCEKLAITHMMFASDLLLFSRADTRSVILLYQAFQSSLKPL 183

Query: 705 ---LNFSMASGLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
                +S+  GL+ NL K+SV  GG+ +  + ++   LG      P +SL
Sbjct: 184 ERRAEYSICEGLEANLDKSSV--GGLCEAEKASMQEILGIWMCLSPIRSL 231


>ref|XP_004239600.1| PREDICTED: uncharacterized protein LOC101264629 [Solanum
           lycopersicum]
          Length = 261

 Score =  200 bits (509), Expect = 5e-49
 Identities = 117/284 (41%), Positives = 161/284 (56%), Gaps = 3/284 (1%)
 Frame = +3

Query: 3   DVSEAIKEFFHTDKIFKAINCSTITLIPKIDKPKTIRL*---IYCLLHYSL*IDFQILTN 173
           DV+EA+K FF T  + K  NC+ ++L PK+  PKT++       C + Y   I  ++LTN
Sbjct: 17  DVTEAVKGFFTTGNLHKDFNCTLVSLKPKVQNPKTVKEYSPIACCTVMYK--IISKVLTN 74

Query: 174 RLQKIMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVK 353
           RL  +++ +IC  QAG +                       +F S  +            
Sbjct: 75  RLHGVIQSVICDSQAGGVG----------------------LFGSSNV------------ 100

Query: 354 WIFLQQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFA 533
           W+ L ++         F+ WL +CVK VNY+I+ NG+ +  FDA KGLR  D +S FLFA
Sbjct: 101 WVRLPEM---------FVQWLTKCVKIVNYSIVFNGQTSQSFDAAKGLRQGDPMSPFLFA 151

Query: 534 ICMEYLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNF 713
           I M+YLSR L GL+ +  F+Y P+CSK+ ITHL FADDLL+F + +LKSVKAI  CF  F
Sbjct: 152 IAMKYLSRLLKGLKEDKQFRYHPRCSKLDITHLCFADDLLMFARGDLKSVKAIQLCFSQF 211

Query: 714 SMASGLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
           S AS LQ NL K+S+Y GGV Q  +  I+  LG+   +LPFK L
Sbjct: 212 SQASRLQANLSKSSIYCGGVQQEVKNQIVQQLGYNMEELPFKYL 255


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score =  181 bits (460), Expect(2) = 1e-45
 Identities = 108/282 (38%), Positives = 159/282 (56%), Gaps = 1/282 (0%)
 Frame = +3

Query: 3    DVSEAIKEFFHTDKIFKAINCSTITLIPKIDKPK-TIRL*IYCLLHYSL*IDFQILTNRL 179
            +V++AIKEFF +  + K  N +TI LIPKI  P  T        L+    +  ++LT+RL
Sbjct: 485  EVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPISCLNTLYKVIARLLTDRL 544

Query: 180  QKIMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVKWI 359
            Q+++  +I S Q+ F+PGR + ENV+LA +LV  Y   +I    M+K+DL+K +DSV+W 
Sbjct: 545  QRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPRGMLKVDLKKAFDSVRWE 604

Query: 360  FLQQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFAIC 539
            F+   L  L    KFI+W+ +C+ T  +T+ ING     F +TKGLR  D +S +LF + 
Sbjct: 605  FVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQGDPLSPYLFVLA 664

Query: 540  MEYLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNFSM 719
            ME  S  L     +    Y PK S + I+HL FADD+++F      S+  I     +F+ 
Sbjct: 665  MEAFSNLLHSRYESGLIHYHPKASNLSISHLMFADDVMIFFDGGSFSLHGICETLDDFAS 724

Query: 720  ASGLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
             SGL+ N  K+ +YL G+NQ    A   Y GF    LP + L
Sbjct: 725  WSGLKVNKDKSHLYLAGLNQLESNANAAY-GFPIGTLPIRYL 765



 Score = 29.3 bits (64), Expect(2) = 1e-45
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 842 LDIPLSTRKISIIQWKPLTDKIVAR 916
           L +PL  RK+ I +++PL +KI AR
Sbjct: 765 LGLPLMNRKLRIAEYEPLLEKITAR 789


>emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein
            [Arabidopsis thaliana]
          Length = 893

 Score =  182 bits (463), Expect = 1e-43
 Identities = 101/282 (35%), Positives = 160/282 (56%), Gaps = 1/282 (0%)
 Frame = +3

Query: 3    DVSEAIKEFFHTDKIFKAINCSTITLIPKI-DKPKTIRL*IYCLLHYSL*IDFQILTNRL 179
            +V+EA++EFF + ++ K  N +T+ LIPKI +  K         L+    +  ++LT+RL
Sbjct: 486  EVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRL 545

Query: 180  QKIMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVKWI 359
            +K++  +I   Q+ F+PGR + ENV+LA E+V  Y  K+I    M+K+DL+K +DSV+W 
Sbjct: 546  KKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWD 605

Query: 360  FLQQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFAIC 539
            F+      L    KF+ W+ +C+ T  +++++NG  +  F + KGLR  D +S +LF + 
Sbjct: 606  FIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLA 665

Query: 540  MEYLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNFSM 719
            ME  S  L         QY PK + + I+HL FADD+++F      S+  I     +F+ 
Sbjct: 666  MEVFSSLLKARFDAGYIQYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFAS 725

Query: 720  ASGLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
             SGL  N  K ++YL G ++    AI HY GF  S LP + L
Sbjct: 726  WSGLHVNKDKTNLYLAGTDEVEALAISHY-GFPISTLPIRYL 766


>gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13)
            [Arabidopsis thaliana]
          Length = 1164

 Score =  174 bits (441), Expect(2) = 1e-43
 Identities = 104/283 (36%), Positives = 160/283 (56%), Gaps = 2/283 (0%)
 Frame = +3

Query: 3    DVSEAIKEFFHTDKIFKAINCSTITLIPKIDKPKTIR--L*IYCLLHYSL*IDFQILTNR 176
            +V+EAI EFF + K+ K  N + + LIPKI    ++     I CL      I  ++LT+R
Sbjct: 382  EVTEAIHEFFTSGKLLKQWNATNLVLIPKITNASSMSDFRPISCLNTVYKVIS-KLLTDR 440

Query: 177  LQKIMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVKW 356
            L+  +   I   Q+ F+PGR   ENV+LA ELV  Y +K+I  S M+K+DL+K +DSV+W
Sbjct: 441  LKDFLPAAISHSQSAFMPGRLFLENVLLATELVHGYNKKNIAPSSMLKVDLRKAFDSVRW 500

Query: 357  IFLQQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFAI 536
             F+   L  L    KF  W+LEC+ T ++++++NG     F ++KGLR  D +S +LF +
Sbjct: 501  DFIVSALRALNVPEKFTCWILECLSTASFSVILNGHSAGHFWSSKGLRQGDPMSPYLFVL 560

Query: 537  CMEYLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNFS 716
             ME  S  L    ++    Y PK S++ I+HL FADD+++F      S+  I     +F+
Sbjct: 561  AMEVFSGLLQSRYTSGYIAYHPKTSQLEISHLMFADDVMIFFDGKSSSLHGIVESLEDFA 620

Query: 717  MASGLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
              SGL  N +K  +Y  G++Q+   ++  Y GF    LP + L
Sbjct: 621  GWSGLLMNTNKTQLYHAGLSQSESDSMASY-GFKLGSLPVRYL 662



 Score = 29.6 bits (65), Expect(2) = 1e-43
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = +2

Query: 842 LDIPLSTRKISIIQWKPLTDKIVAR 916
           L +PL +RK++I ++ PL +KI AR
Sbjct: 662 LGLPLMSRKLTIAEYAPLIEKITAR 686


>dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 893

 Score =  181 bits (458), Expect = 4e-43
 Identities = 100/282 (35%), Positives = 159/282 (56%), Gaps = 1/282 (0%)
 Frame = +3

Query: 3    DVSEAIKEFFHTDKIFKAINCSTITLIPKI-DKPKTIRL*IYCLLHYSL*IDFQILTNRL 179
            +V+EA++EFF + ++ K  N +T+ LIPKI +  K         L+    +  ++LT+RL
Sbjct: 486  EVTEAVQEFFRSGQLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRL 545

Query: 180  QKIMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVKWI 359
            +K++  +I   Q+ F+PGR + ENV+LA E+V  Y  K+I    M+K+DL+K +DSV+W 
Sbjct: 546  KKLLNEVISPSQSAFLPGRLLSENVLLATEIVHGYNTKNISSRGMLKVDLRKAFDSVRWD 605

Query: 360  FLQQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFAIC 539
            F+      L    KF+ W+ +C+ T  +++++NG  +  F + KGLR  D +S +LF + 
Sbjct: 606  FIISAFRALAVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLA 665

Query: 540  MEYLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNFSM 719
            ME  S  L          Y PK + + I+HL FADD+++F      S+  I     +F+ 
Sbjct: 666  MEVFSSLLKARFDAGYIHYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFAS 725

Query: 720  ASGLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
             SGL  N  K ++YL G ++    AI HY GF  S LP + L
Sbjct: 726  WSGLHVNKDKTNLYLAGTDEVEALAISHY-GFPISTLPIRYL 766


>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
          Length = 939

 Score =  169 bits (428), Expect(2) = 2e-42
 Identities = 89/211 (42%), Positives = 131/211 (62%)
 Frame = +3

Query: 213  QAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVKWIFLQQILEKLEF 392
            QA F+PG+++ ++V+LA EL++ Y RKH    CM++ID+QK YD+V W  L+ IL +L F
Sbjct: 375  QAAFVPGQQLHDHVMLAFELLRGYERKHGTPKCMLQIDIQKAYDTVHWDALEHILRELGF 434

Query: 393  LNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFAICMEYLSRCLVGL 572
             ++FI W++  V++V Y   ING  T   +A +G+R  D IS  LF + MEYL+R L  L
Sbjct: 435  PDQFIKWIMIAVRSVTYVFNINGRFTRRLEARRGIRQGDPISPLLFILVMEYLNRILSQL 494

Query: 573  QSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNFSMASGLQENLHKN 752
               P+F Y  KC KM IT+L FADDLLLF++ ++ SV+ +   F  F  + GL  N  K 
Sbjct: 495  DKIPNFNYHSKCEKMKITNLCFADDLLLFSRGDIGSVQIMLDKFNTFLRSMGLHVNPSKC 554

Query: 753  SVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
            ++Y G V+   +  +L   GF    +PF+ L
Sbjct: 555  NIYCGSVDINVKEQLLLISGFKEGKMPFRYL 585



 Score = 30.8 bits (68), Expect(2) = 2e-42
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +2

Query: 827 LAF*VLDIPLSTRKISIIQWKPLTDKIVARI 919
           + F  L IPLS++K++I  ++ L DKIV RI
Sbjct: 580 MPFRYLGIPLSSKKLNIKHYQVLIDKIVGRI 610


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  175 bits (444), Expect(2) = 2e-42
 Identities = 102/284 (35%), Positives = 156/284 (54%), Gaps = 3/284 (1%)
 Frame = +3

Query: 3   DVSEAIKEFFHTDKIFKAINCSTITLIPKIDKP---KTIRL*IYCLLHYSL*IDFQILTN 173
           D   AIK FF    + K +N + + LIPK D+    +  R    C + Y   +  +I+ N
Sbjct: 64  DFIAAIKSFFIKGFLPKGLNATILALIPKKDEATLMRDYRPISCCNVIYK--VISKIIAN 121

Query: 174 RLQKIMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVK 353
           RL+ ++   I   Q+ F+  R + ENV+LA ELV+ Y +  I   C +KID+ K +DSV+
Sbjct: 122 RLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQ 181

Query: 354 WIFLQQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFA 533
           W FL   LE L F   F  W+  C+ T  +++ +NGEL   F + +GLR    +S +LF 
Sbjct: 182 WQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFV 241

Query: 534 ICMEYLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNF 713
           ICM  LS  +     + +  Y PKC K+ +THL FADDL++F     +SV+ + + F  F
Sbjct: 242 ICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFADDLMVFIDGQQRSVEGVINIFKEF 301

Query: 714 SMASGLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
           +  SGL  +L K+++YL GV++ ++  IL    F    LP + L
Sbjct: 302 AGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYL 345



 Score = 24.6 bits (52), Expect(2) = 2e-42
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +2

Query: 842 LDIPLSTRKISIIQWKPLTDKIVARI 919
           L +PL T++++   + PL DK+ ++I
Sbjct: 345 LGLPLLTKQMTTADYSPLLDKVRSKI 370


>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
            subsp. vesca]
          Length = 958

 Score =  175 bits (443), Expect(2) = 4e-42
 Identities = 94/284 (33%), Positives = 156/284 (54%), Gaps = 4/284 (1%)
 Frame = +3

Query: 6    VSEAIKEFFHTDKIFKAINCSTITLIPKIDKPKTI---RL*IYCLLHYSL*IDFQILTNR 176
            V+ A+KEFF    +   +N + ITL+PK+  P T+   R    C   Y   I  ++L NR
Sbjct: 313  VAAAVKEFFSYGSLLMELNSTIITLVPKVANPTTMSDFRPISCCNTFYK--IIAKLLANR 370

Query: 177  LQKIMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVKW 356
            L+  +  I+   Q+ FIPGR+IG+N++LA E++  Y +      C   +D+ K  D+V+W
Sbjct: 371  LKGTLHLIVGPSQSTFIPGRRIGDNILLAQEIICDYHKADGQPRCTFMVDMMKANDTVEW 430

Query: 357  IFLQQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFAI 536
             F+   L+     +  I W+  C+ +  +++ +NGEL   F   +GLR  D +S +LF I
Sbjct: 431  DFIIATLQAFNIPSTLIGWIKSCISSAKFSVCVNGELAGFFARRRGLRQGDPLSPYLFVI 490

Query: 537  CMEYLSRCLV-GLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNF 713
             ME LS C+   +  +P F+Y  +C ++ ++HL FADDLL+F   +  SV+ ++  F NF
Sbjct: 491  AMEVLSLCIQRRINCSPCFRYHWRCDQLNLSHLCFADDLLMFCNGDENSVRTLHDAFSNF 550

Query: 714  SMASGLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
               S L+ N+ ++ ++L GV+  S  ++L    F     P + L
Sbjct: 551  ESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYL 594



 Score = 24.3 bits (51), Expect(2) = 4e-42
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +2

Query: 842 LDIPLSTRKISIIQWKPLTDKIVARI 919
           L IPL T K+ +    PL D+I  RI
Sbjct: 594 LGIPLITSKLRMQDCSPLLDRIETRI 619


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score =  175 bits (444), Expect = 2e-41
 Identities = 100/280 (35%), Positives = 159/280 (56%), Gaps = 3/280 (1%)
 Frame = +3

Query: 15   AIKEFFHTDKIFKAINCSTITLIPKIDKP---KTIRL*IYCLLHYSL*IDFQILTNRLQK 185
            A++ FF    + K IN + + LIPK  +    K  R    C + Y   +  +I+ NRL+ 
Sbjct: 495  AVQSFFTKGFLPKGINSTILALIPKKTEAREMKDYRPISCCNVLYK--VISKIIANRLKL 552

Query: 186  IMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVKWIFL 365
            ++   I   Q+ F+  R + EN++LA ELV+ Y +  I   C IKID+ K +DSV+W FL
Sbjct: 553  VLPKFIAGNQSAFVKDRLLIENLLLATELVKDYHKDTISTRCAIKIDISKAFDSVQWPFL 612

Query: 366  QQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFAICME 545
              +   L F  +FI W+  C+ T ++++ +NGEL   F +++GLR    +S +LF ICM+
Sbjct: 613  INVFTILGFPREFIHWINICITTASFSVQVNGELAGYFQSSRGLRQGCALSPYLFVICMD 672

Query: 546  YLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNFSMAS 725
             LS+ L    +   F Y PKC  M +THLSFADDL++ +   ++S++ I   F  F+  S
Sbjct: 673  VLSKMLDKAAAARHFGYHPKCKTMGLTHLSFADDLMVLSDGKIRSIERIIKVFDEFAKWS 732

Query: 726  GLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
            GL+ +L K++VYL G++ T++  +     F    LP + L
Sbjct: 733  GLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYL 772


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  175 bits (443), Expect = 2e-41
 Identities = 101/284 (35%), Positives = 157/284 (55%), Gaps = 3/284 (1%)
 Frame = +3

Query: 3    DVSEAIKEFFHTDKIFKAINCSTITLIPKIDKP---KTIRL*IYCLLHYSL*IDFQILTN 173
            D   AI+ FF    + K +N + + LIPK D+    K  R    C + Y   +  +IL N
Sbjct: 788  DFIAAIQSFFVKGFLPKGLNATILALIPKKDEAIEMKDYRPISCCNVLYK--VISKILAN 845

Query: 174  RLQKIMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVK 353
            RL+ ++   I   Q+ F+  R + ENV+LA ELV+ Y ++ +   C +KID+ K +DSV+
Sbjct: 846  RLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQ 905

Query: 354  WIFLQQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFA 533
            W FL   LE L F   F  W+  C+ T  +++ +NGEL   F +++GLR    +S +LF 
Sbjct: 906  WQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFGSSRGLRQGCALSPYLFV 965

Query: 534  ICMEYLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNF 713
            ICM  LS  +     + +  Y PKC K+ +THL FADDL++F   +  S++ + + F  F
Sbjct: 966  ICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFADDLMVFVDGHQWSIEGVINVFKEF 1025

Query: 714  SMASGLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
            +  SGLQ +L K+++YL GV+ + +   L    F    LP + L
Sbjct: 1026 AGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYL 1069


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score =  165 bits (417), Expect(2) = 9e-40
 Identities = 100/283 (35%), Positives = 155/283 (54%), Gaps = 2/283 (0%)
 Frame = +3

Query: 3    DVSEAIKEFFHTDKIFKAINCSTITLIPKIDKPKTIR--L*IYCLLHYSL*IDFQILTNR 176
            +V  AI EFF + ++ K  N +T+ LIPK     TI     I CL      I  ++LT+R
Sbjct: 345  EVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVIS-KLLTSR 403

Query: 177  LQKIMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVKW 356
            LQ ++  +I   Q+ F+PGR + ENV+LA E+V  Y R +I    M+K+DL+K +DSVKW
Sbjct: 404  LQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKW 463

Query: 357  IFLQQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFAI 536
             F+   L  L    ++I+W+ +C+ T ++TI +NG     F +TKGLR  D +S +LF +
Sbjct: 464  EFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVL 523

Query: 537  CMEYLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNFS 716
             ME  S+ L     +    Y PK   + I+HL FADD+++F      S+  I     +F+
Sbjct: 524  AMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFA 583

Query: 717  MASGLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
              SGL+ N  K+ ++  G++ + +     Y GF     P + L
Sbjct: 584  DWSGLKVNKDKSQLFQAGLDLSERITSAAY-GFPAGTFPIRYL 625



 Score = 26.2 bits (56), Expect(2) = 9e-40
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 842 LDIPLSTRKISIIQWKPLTDKIVARI 919
           L +PL  RK+ I  + PL +K+ AR+
Sbjct: 625 LGLPLMCRKLRIADYGPLLEKLSARL 650


>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score =  165 bits (417), Expect(2) = 9e-40
 Identities = 100/283 (35%), Positives = 155/283 (54%), Gaps = 2/283 (0%)
 Frame = +3

Query: 3    DVSEAIKEFFHTDKIFKAINCSTITLIPKIDKPKTIR--L*IYCLLHYSL*IDFQILTNR 176
            +V  AI EFF + ++ K  N +T+ LIPK     TI     I CL      I  ++LT+R
Sbjct: 345  EVLAAIHEFFDSGQLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVIS-KLLTSR 403

Query: 177  LQKIMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVKW 356
            LQ ++  +I   Q+ F+PGR + ENV+LA E+V  Y R +I    M+K+DL+K +DSVKW
Sbjct: 404  LQGLLSAVIGHSQSAFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKW 463

Query: 357  IFLQQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFAI 536
             F+   L  L    ++I+W+ +C+ T ++TI +NG     F +TKGLR  D +S +LF +
Sbjct: 464  EFVTAALRALAIPERYINWIHQCITTPSFTISVNGATGGFFRSTKGLRQGDPLSPYLFVL 523

Query: 537  CMEYLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNFS 716
             ME  S+ L     +    Y PK   + I+HL FADD+++F      S+  I     +F+
Sbjct: 524  AMEVFSKLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFA 583

Query: 717  MASGLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
              SGL+ N  K+ ++  G++ + +     Y GF     P + L
Sbjct: 584  DWSGLKVNKDKSQLFQAGLDLSERITSAAY-GFPAGTFPIRYL 625



 Score = 26.2 bits (56), Expect(2) = 9e-40
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +2

Query: 842 LDIPLSTRKISIIQWKPLTDKIVARI 919
           L +PL  RK+ I  + PL +K+ AR+
Sbjct: 625 LGLPLMCRKLRIADYGPLLEKLSARL 650


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  169 bits (429), Expect = 1e-39
 Identities = 98/280 (35%), Positives = 156/280 (55%), Gaps = 3/280 (1%)
 Frame = +3

Query: 15  AIKEFFHTDKIFKAINCSTITLIPK---IDKPKTIRL*IYCLLHYSL*IDFQILTNRLQK 185
           AI+ FF    + K +N + + LIPK     + K  R    C + Y   +  +IL NRL+ 
Sbjct: 48  AIQSFFALGFLPKGVNSTILALIPKKLESKEMKDYRPISCCNVMYK--VISKILANRLKL 105

Query: 186 IMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSVKWIFL 365
           ++   I   Q+ F+  R + ENV+LA +LV+ Y +  I   C IKID+ K  DSV+W FL
Sbjct: 106 LLPQFIAGNQSSFVKDRLLIENVLLATDLVKDYHKDSISERCAIKIDISKASDSVQWSFL 165

Query: 366 QQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLFAICME 545
              L  + F   FI W+  C+ T ++++ +NGEL   F +++GLR    +S +LF ICM+
Sbjct: 166 INTLTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGFFQSSRGLRQGCALSPYLFVICMD 225

Query: 546 YLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLNFSMAS 725
            LS+ L  +       Y P C +M +THLSFADDL++ T    +S++ I   F  FS  S
Sbjct: 226 VLSKLLDKVVGIGRIGYHPHCKRMGLTHLSFADDLMILTDGQCRSIEGIIEVFDLFSKWS 285

Query: 726 GLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
           GL+ ++ K++++  G++ TS+  +  +  F   +LP + L
Sbjct: 286 GLKISMEKSTIFSAGLSSTSRAQLHTHFPFEVGELPIRYL 325


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1216

 Score =  169 bits (427), Expect = 2e-39
 Identities = 100/285 (35%), Positives = 159/285 (55%), Gaps = 4/285 (1%)
 Frame = +3

Query: 3    DVSEAIKEFFHTDKIFKAINCSTITLIPKIDKPKTIR--L*IYC--LLHYSL*IDFQILT 170
            +V  AI+ FF    + K +N + + LIPK  + + I+    I C  +L+ ++    +IL 
Sbjct: 212  EVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAREIKDYRPISCCNVLYKAI---SKILA 268

Query: 171  NRLQKIMRHIICSFQAGFIPGRKIGENVILAHELVQAYFRKHIFHSCMIKIDLQKVYDSV 350
            NRL++I+   I   Q+ F+  R + ENV+LA ELV+ Y +  I   C +KID+ K +DS+
Sbjct: 269  NRLKRILPKFIVGNQSAFVKDRLLIENVLLATELVKDYHKDSISTRCAMKIDISKAFDSL 328

Query: 351  KWIFLQQILEKLEFLNKFISWLLECVKTVNYTILINGELTVPFDATKGLR*RDLISLFLF 530
            +W FL  +L  + F  +FI W+  C+ T +++I +NGEL   F + +GLR    +S +LF
Sbjct: 329  QWSFLTHVLAAMNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLF 388

Query: 531  AICMEYLSRCLVGLQSNPDFQYRPKCSKMCITHLSFADDLLLFTKENLKSVKAIYSCFLN 710
             I M+ LSR L       +F Y P+C  + +THL FADDL++ T   ++SV  I      
Sbjct: 389  VISMDVLSRMLDKAAGAREFGYHPRCKTLGLTHLCFADDLMILTDGKIRSVDGIVKVLNQ 448

Query: 711  FSMASGLQENLHKNSVYLGGVNQTSQTAILHYLGFGFSDLPFKSL 845
            F+   GL+  + K ++YL GV+  S+  +     FG   LP + L
Sbjct: 449  FAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYL 493