BLASTX nr result
ID: Atropa21_contig00025276
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00025276
(919 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABI34321.1| RNase H family protein [Solanum demissum] 75 7e-13
ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601... 75 3e-11
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A... 65 5e-08
ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein A... 64 6e-08
ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260... 63 2e-07
ref|XP_006345316.1| PREDICTED: uncharacterized protein LOC102605... 62 4e-07
ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein A... 59 2e-06
ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein A... 59 2e-06
ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein A... 58 4e-06
ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein A... 58 4e-06
>gb|ABI34321.1| RNase H family protein [Solanum demissum]
Length = 945
Score = 74.7 bits (182), Expect(2) = 7e-13
Identities = 38/102 (37%), Positives = 58/102 (56%)
Frame = -3
Query: 311 SWRLFKHKLPFPNNSVCRFVDNMPTDCFCCITALTVIIQYFFMEGEVAQAL*KFFGQPLG 132
+WRL ++KLPF ++V +FVDN+ ++C CC T I + F+ +VA L K FG LG
Sbjct: 583 TWRLVQNKLPF-YDTVGKFVDNIDSNCVCCKNMKTETINHVFLNSDVASYLWKKFGGTLG 641
Query: 131 IIYPRKLVKAFLQDWCKTKIRNVVHKMMIQVLPIIIYWGMSK 6
I L+ W + N +H ++I LPI+I+W + K
Sbjct: 642 IDTRASSTINLLKTWWNVQTHNSIHNVIIHTLPILIFWEIWK 683
Score = 26.2 bits (56), Expect(2) = 7e-13
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 11/81 (13%)
Frame = -2
Query: 609 WLDN*TGLGTLLSTVR-----NKTILLDPRSFQNQRWDMEELQEILPN*ICQHIQSI--- 454
W DN G G L + + NK + D + WD ++L +ILP + I SI
Sbjct: 473 WWDNWMGNGALSNILPPPSHYNKDNVKD--FIHKREWDFDKLSDILPPQVVNQIVSIPIG 530
Query: 453 ---RRNYLTCKNSKDGTYSNK 400
+ +Y S++G ++ K
Sbjct: 531 DPNQSDYAIWIPSENGHFTTK 551
>ref|XP_006367184.1| PREDICTED: uncharacterized protein LOC102601483 [Solanum tuberosum]
Length = 2019
Score = 75.1 bits (183), Expect = 3e-11
Identities = 80/328 (24%), Positives = 129/328 (39%), Gaps = 26/328 (7%)
Frame = -3
Query: 911 NDKDKYHRSSWENLCFSKDEGGVGLG------------RWLIFVKYSILKSDRDLDVKTP 768
N+K KYH +SW+NL F +EGG+G+ +W F L D +K
Sbjct: 398 NEKKKYHWASWKNLSFPYEEGGIGMRNLKDVCIAFQYKQWWCFRSKQTLWGDF---LKAK 454
Query: 767 YDKDLPKPSTA*KHIRCLKYECLILSFWGTLTKIRKRVEINMIWIIENGECSFGWIIRLD 588
Y + S K++ W L + +VE ++ W + +G CSF W L
Sbjct: 455 YCQRSNPISK--------KWDTGDSLTWKHLMHNKHKVEEHIQWKLNSGSCSFWWDNWLG 506
Query: 587 LGPCLVLSG--------TKPSY*IQGHFKIKDGIWKSYRKFSPTEFASTFNP*EGII*HV 432
+GP S T + ++G + + I ++ + ++ F + I +
Sbjct: 507 VGPLARFSTDSNRLNNTTVAEFLVEGQWNVNKLIQQAPNDYLANILSTKFYVQQEIP-NQ 565
Query: 431 RIPKMEPTP--TKSMKFXXXXXXXXXXXXXSLI*KXXXXXXFS---WRLFKHKLPFPNNS 267
I K+ T S + + I S WR + KLP N
Sbjct: 566 AIWKLNSDGNFTYSSAWNAIREKRTKTIFNTFIWHKSIPFKTSFLLWRTLRGKLP-TNEK 624
Query: 266 VCRFVDNMPTDCFCCITALTV-IIQYFFMEGEVAQAL*KFFGQPLGIIYPRKLVKAFLQD 90
+ F N P +CFCC + I++ F +G+ A L K F GII + +
Sbjct: 625 LISF-GNEPANCFCCCNRSGLDTIEHTFNKGQFATYLWKSFAAAAGIITYHNSLPQLIMQ 683
Query: 89 WCKTKIRNVVHKMMIQVLPIIIYWGMSK 6
W TK N +++++Q PI I W + K
Sbjct: 684 WWSTKHNNAAYRLILQATPIFICWNLWK 711
>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 64.7 bits (156), Expect = 5e-08
Identities = 77/323 (23%), Positives = 127/323 (39%), Gaps = 21/323 (6%)
Frame = -3
Query: 911 NDKDKYHRSSWENLCFSKDEGGVGLGRWLIFVKYSILKSDRDLDVK-TPYDKDLPKPSTA 735
N+ KYH SSW+NL + +EGGVG+ K K K T + L
Sbjct: 222 NNSKKYHWSSWKNLSYPYEEGGVGMRNLNDVCKSFQFKQWWTFRTKQTLWGDFLRAKYCQ 281
Query: 734 *KHIRCLKYECLILSFWGTLTKIRKRVEINMIWIIENGECSFGWIIRLDLGPCLVLSGTK 555
+ K++ W + IR++VE ++ W ++ G CSF W + GP L+
Sbjct: 282 RSNPVSKKWDTGQSLTWKHMLAIRQQVEQHIQWQLQAGNCSFWWDNWMGTGP---LAQHT 338
Query: 554 PSY*IQGHFKIKD----GIWKSYRKFSPTEFASTFNP*EGII*HVRIPKMEPTPTKSM-K 390
+ + K+ D G+W +YRK AS I + IP+ + + + K
Sbjct: 339 CNNIRLNNSKVADFWENGVW-NYRKLVEQAPASQL----ANIMAIAIPQQQYQQDQPVWK 393
Query: 389 FXXXXXXXXXXXXXSLI*KXXXXXXFSWRLFKHKLPF--------------PNNSVCRFV 252
+ K S+ L+ + +PF P N
Sbjct: 394 LHSQGKFSCHSAWEEIRNKKAKNRFLSF-LWHNFIPFKTSFLLWRILKGKIPTNEKLTNF 452
Query: 251 DNMPTDCFCCITALTV-IIQYFFMEGEVAQAL*KFFGQPLGIIYPRKLVKAFLQDWCKTK 75
P+ C+CC+ + I + F G A + K F G+ ++ ++A L+ W K
Sbjct: 453 GIEPSPCYCCVDRAGMDSINHIFNTGNFAGRVWKSFAAGAGLQQDQQTLQARLKQWWTAK 512
Query: 74 IRNVVHKMMIQVLPIIIYWGMSK 6
N H++++Q PI I W + K
Sbjct: 513 SCNAGHQLLLQATPIFICWNLWK 535
>ref|XP_004253443.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 64.3 bits (155), Expect = 6e-08
Identities = 74/323 (22%), Positives = 124/323 (38%), Gaps = 21/323 (6%)
Frame = -3
Query: 911 NDKDKYHRSSWENLCFSKDEGGVGLGRWLIFVKYSILKSDRDLDVK-TPYDKDLPKPSTA 735
N+ KYH SSW+NL + +EGGVG+ K K K T + L
Sbjct: 222 NNSKKYHWSSWKNLSYPYEEGGVGMRNLNDVCKSFQFKQWWTFQTKQTLWGDFLRAKYCQ 281
Query: 734 *KHIRCLKYECLILSFWGTLTKIRKRVEINMIWIIENGECSFGWIIRLDLGPCLVLSGTK 555
+ K++ W + IR++VE ++ W ++ G CSF W + GP L+
Sbjct: 282 RSNPVSKKWDTGQSLTWKHMLAIRQQVEQHIQWQLQAGNCSFWWDNCMGTGP---LAQHT 338
Query: 554 PSY*IQGHFKIKD----GIWKSYRKFSPTEFASTFNP*EGII*HVRIPKMEPTPTKSM-K 390
S + K+ D G+W + + N I + IP+ + + + K
Sbjct: 339 CSNIRLNNSKVADFWENGVWNCRKLVEQAPASQLAN-----IMAIAIPQQQHQQDQPVWK 393
Query: 389 FXXXXXXXXXXXXXSLI*KXXXXXXFSWRLFKHKLPF--------------PNNSVCRFV 252
+ K S+ L+ + +PF P N
Sbjct: 394 LHSQGKFSCHSAWEEIRNKKAKNRFLSF-LWHNFIPFKTSFLLWRILKGKIPTNEKLTNF 452
Query: 251 DNMPTDCFCCITALTV-IIQYFFMEGEVAQAL*KFFGQPLGIIYPRKLVKAFLQDWCKTK 75
P+ C+CC+ + I + F G A + K F G+ ++ ++A L+ W K
Sbjct: 453 GIEPSPCYCCVDRAGMDSINHIFNTGNFAGRVWKSFAAGAGLQEDQQTLQARLKQWWTAK 512
Query: 74 IRNVVHKMMIQVLPIIIYWGMSK 6
N H++++Q PI I W + K
Sbjct: 513 SCNAGHQLLLQATPIFICWNLWK 535
>ref|XP_004233579.1| PREDICTED: uncharacterized protein LOC101260201 [Solanum
lycopersicum]
Length = 1531
Score = 62.8 bits (151), Expect = 2e-07
Identities = 75/306 (24%), Positives = 110/306 (35%), Gaps = 5/306 (1%)
Frame = -3
Query: 908 DKD--KYHRSSWENLCFSKDEGGVGLGRWLIFVKYSILKSDRDLDV-KTPYDKDLPKPST 738
DKD KYH +SW+ L + +EGG+G+ K K + K+ + + L
Sbjct: 1124 DKDGKKYHWASWDTLAYPTNEGGIGVRLLDDICKAFQYKHWWEFRTKKSLWSQFLKAKYC 1183
Query: 737 A*KHIRCLKYECLILSFWGTLTKIRKRVEINMIWIIENGECSFGWIIRLDLGPCLVLSGT 558
+ KY+ W LT+ R +E + W I +G F W L G
Sbjct: 1184 QRANPVAKKYDTGDSLVWRYLTRNRSEMEAYIRWNINSGTSKFWWDNWLGNGAIANYCDN 1243
Query: 557 KPSY--*IQGHFKIKDGIWKSYRKFSPTEFASTFNP*EGII*HVRIPKMEPTPTKSMKFX 384
S + F I W+ RK + NP II H +IP
Sbjct: 1244 VSSLNNRVLADFLIDASAWEVIRK------KKSVNPINNIIWHNQIP------------- 1284
Query: 383 XXXXXXXXXXXXSLI*KXXXXXXFSWRLFKHKLPFPNNSVCRFVDNMPTDCFCCITALTV 204
F WR + KLP N V RF DC+CC
Sbjct: 1285 ------------------FKVAFFIWRALRGKLP-TNEGVHRF-GIAAEDCYCCYQQGKD 1324
Query: 203 IIQYFFMEGEVAQAL*KFFGQPLGIIYPRKLVKAFLQDWCKTKIRNVVHKMMIQVLPIII 24
I + + A + K+ LG+ +++ L W N VHK+++Q+LP I
Sbjct: 1325 DINHILLTRNFANYIWKYHAAILGVTQLYTNIRSQLMHWRNQHTINEVHKLIMQILPNYI 1384
Query: 23 YWGMSK 6
W + K
Sbjct: 1385 CWNLWK 1390
>ref|XP_006345316.1| PREDICTED: uncharacterized protein LOC102605946 [Solanum tuberosum]
Length = 184
Score = 61.6 bits (148), Expect = 4e-07
Identities = 39/106 (36%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = -3
Query: 917 SSNDKDKYHRSSWENLCFSKDEGGVGLGRWL-IFVKYSILKSDRDLDVKTPYDKDLPKPS 741
S+ +KDKYH SSW N C+ K EGG+G+ R I +I K + V P K +
Sbjct: 12 STTEKDKYHLSSWINTCYPKQEGGLGMRRMSDICDTLNIKKWAKYCVVARPVAKVWVSGN 71
Query: 740 TA*KHIRCLKYECLILSFWGTLTKIRKRVEINMIWIIENGECSFGW 603
+ HI W T+ R + E+NM WII+NG SF W
Sbjct: 72 S---HI------------WKNFTQARDKAEVNMRWIIQNGSSSFWW 102
Score = 59.3 bits (142), Expect = 2e-06
Identities = 43/139 (30%), Positives = 74/139 (53%), Gaps = 8/139 (5%)
Frame = -2
Query: 843 GIRKMVDICEILNIKK**RFRCQDSL**RFTKAKYCIKAHQVSKV*VSDTLILGYIDQNK 664
G+R+M DIC+ LNIKK AKYC+ A V+KV VS +I +N
Sbjct: 37 GMRRMSDICDTLNIKK---------------WAKYCVVARPVAKVWVSGN---SHIWKNF 78
Query: 663 EES*NQHDLDY*KWGV*-----FWLDN*TGLGTLLSTVRNKT--ILLDPRSF-QNQRWDM 508
++ ++ +++ +W + FW DN TG G + N++ I + +F NQ W++
Sbjct: 79 TQARDKAEVNM-RWIIQNGSSSFWWDNWTGFGAIAKYCPNQSHSIRIHIHNFINNQEWNI 137
Query: 507 EELQEILPN*ICQHIQSIR 451
+ LQ++LP + QH+ +++
Sbjct: 138 QRLQQLLPMWLSQHVTTLK 156
>ref|XP_004253338.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 655
Score = 59.3 bits (142), Expect = 2e-06
Identities = 33/101 (32%), Positives = 49/101 (48%)
Frame = -3
Query: 308 WRLFKHKLPFPNNSVCRFVDNMPTDCFCCITALTVIIQYFFMEGEVAQAL*KFFGQPLGI 129
WR K KLP N + + + +DC CC I + + G A+ + K LGI
Sbjct: 377 WRALKGKLP--TNEFLQRIGSNISDCSCCYRKGKDDINHILINGNFAKYIWKIHAATLGI 434
Query: 128 IYPRKLVKAFLQDWCKTKIRNVVHKMMIQVLPIIIYWGMSK 6
I ++A L W K+ N VHK++I +LP +I W + K
Sbjct: 435 IPVNTNLRAQLLHWRNQKVNNEVHKLLIHILPNLICWNLWK 475
>ref|XP_004253259.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 668
Score = 59.3 bits (142), Expect = 2e-06
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Frame = -3
Query: 308 WRLFKHKLPFPNNSVCRFVDNMPTDCFCCITALTV-IIQYFFMEGEVAQAL*KFFGQPLG 132
WR+ K KLP N + F P+ CFCC+ + I++ F G A + + F G
Sbjct: 332 WRVLKGKLP-TNEKLSNFGIE-PSSCFCCVDRTGMDSIEHTFNSGSFATRVWRAFTTTAG 389
Query: 131 IIYPRKLVKAFLQDWCKTKIRNVVHKMMIQVLPIIIYWGMSK 6
+ + V+A L+ W ++RN H++++Q +PI I W + K
Sbjct: 390 LQEDQSSVQARLRQWWTARLRNASHQLLLQAMPIFIVWNLWK 431
>ref|XP_004253520.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 468
Score = 58.2 bits (139), Expect = 4e-06
Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Frame = -3
Query: 308 WRLFKHKLPFPNNSVCRFVDNMPTDCFCCITALTV-IIQYFFMEGEVAQAL*KFFGQPLG 132
WR K KLP N + F P CFCC + I++ F G A + FF G
Sbjct: 129 WRTLKGKLP-TNEKLSNFGIE-PLPCFCCFDRAGMDTIEHIFNSGPFATIVWNFFAATAG 186
Query: 131 IIYPRKLVKAFLQDWCKTKIRNVVHKMMIQVLPIIIYWGMSK 6
I + A ++ W TK N HK+++Q PI I W + K
Sbjct: 187 IQADHSTLPALIKQWWTTKPNNAGHKLLLQATPIFICWNLWK 228
>ref|XP_004253405.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 375
Score = 58.2 bits (139), Expect = 4e-06
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = -3
Query: 308 WRLFKHKLPFPNNSVCRFVDNMPTDCFCCITALTV-IIQYFFMEGEVAQAL*KFFGQPLG 132
WR+ K KLP N + F P+ CFCC+ + I++ F G A + + F G
Sbjct: 61 WRVLKGKLP-TNEKLSNFSIE-PSSCFCCVDRTRMDSIEHTFNSGSFATKVWRAFTTTAG 118
Query: 131 IIYPRKLVKAFLQDWCKTKIRNVVHKMMIQVLPIIIYWGMSK 6
+ + V+A L+ W + RN H++++Q +PI I W + K
Sbjct: 119 LQEDQSSVQARLRQWWTARPRNASHQLLLQAMPIFIVWNLWK 160