BLASTX nr result
ID: Atropa21_contig00025220
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00025220
(489 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006351701.1| PREDICTED: DNA polymerase V-like [Solanum tu... 122 4e-26
ref|XP_004230526.1| PREDICTED: DNA polymerase V-like [Solanum ly... 120 1e-25
emb|CBI35443.3| unnamed protein product [Vitis vinifera] 72 8e-11
ref|XP_002263595.1| PREDICTED: DNA polymerase V-like [Vitis vini... 72 8e-11
emb|CAN80013.1| hypothetical protein VITISV_030078 [Vitis vinifera] 72 8e-11
ref|XP_004292138.1| PREDICTED: DNA polymerase V-like [Fragaria v... 71 1e-10
ref|XP_002518323.1| DNA binding protein, putative [Ricinus commu... 67 3e-09
ref|XP_006486780.1| PREDICTED: DNA polymerase V-like isoform X1 ... 66 5e-09
ref|XP_006422655.1| hypothetical protein CICLE_v10027696mg [Citr... 66 5e-09
gb|EMJ02421.1| hypothetical protein PRUPE_ppa000330mg [Prunus pe... 62 6e-08
ref|XP_002313953.2| hypothetical protein POPTR_0009s08340g [Popu... 62 8e-08
gb|EXC33021.1| DNA polymerase V [Morus notabilis] 62 1e-07
ref|XP_002300310.2| hypothetical protein POPTR_0001s29220g [Popu... 59 9e-07
gb|EOX98606.1| DNA polymerase phi subunit [Theobroma cacao] 57 2e-06
ref|XP_002864901.1| DNA polymerase V family [Arabidopsis lyrata ... 56 4e-06
gb|ESW20324.1| hypothetical protein PHAVU_006G199700g [Phaseolus... 55 7e-06
ref|XP_006279898.1| hypothetical protein CARUB_v10025747mg [Caps... 55 7e-06
ref|XP_003547107.1| PREDICTED: DNA polymerase V-like [Glycine max] 55 7e-06
ref|XP_003593314.1| DNA polymerase V [Medicago truncatula] gi|35... 55 7e-06
gb|ABN05723.1| DNA polymerase V [Medicago truncatula] 55 7e-06
>ref|XP_006351701.1| PREDICTED: DNA polymerase V-like [Solanum tuberosum]
Length = 1252
Score = 122 bits (307), Expect = 4e-26
Identities = 64/86 (74%), Positives = 69/86 (80%), Gaps = 7/86 (8%)
Frame = -2
Query: 488 KSIVSSKPDDSSY-------LAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLTDPN 330
KS VSS PDD+S+ LAKLGCLVN LLKNMPDKASRRADVRKF GK+IQVLTD
Sbjct: 1167 KSFVSSNPDDNSHFAKLGSHLAKLGCLVNVLLKNMPDKASRRADVRKFFGKVIQVLTDLE 1226
Query: 329 LRALFLRALEPDCEVQLKDMFPALKK 252
RALFL ALEPDCE QL+DMFPAL +
Sbjct: 1227 QRALFLEALEPDCEAQLRDMFPALNQ 1252
>ref|XP_004230526.1| PREDICTED: DNA polymerase V-like [Solanum lycopersicum]
gi|460369353|ref|XP_004230527.1| PREDICTED: DNA
polymerase V-like [Solanum lycopersicum]
Length = 1252
Score = 120 bits (302), Expect = 1e-25
Identities = 63/86 (73%), Positives = 68/86 (79%), Gaps = 7/86 (8%)
Frame = -2
Query: 488 KSIVSSKPDDSSY-------LAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLTDPN 330
KS VSS PDD+S+ LAK GCLVN LLKNMPDKASRRADVRKF GK+IQVLTD
Sbjct: 1167 KSFVSSNPDDNSHFAELGSHLAKSGCLVNVLLKNMPDKASRRADVRKFFGKVIQVLTDVE 1226
Query: 329 LRALFLRALEPDCEVQLKDMFPALKK 252
LRALFL+ALEPDCE QLK MFP L +
Sbjct: 1227 LRALFLKALEPDCEAQLKGMFPVLNQ 1252
>emb|CBI35443.3| unnamed protein product [Vitis vinifera]
Length = 1237
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Frame = -2
Query: 476 SSKPDDSSYLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLTDPNLRALFLRALEP 297
+SK S+L KLG L+ L+ NMP+K +RR VRKFCGK+ Q+++ NL FL+ L P
Sbjct: 1156 ASKKMLKSHLPKLGLLIKVLVTNMPEKQARRTHVRKFCGKVFQMISTSNLTKSFLKDLPP 1215
Query: 296 D----CEVQLKDMFPALKK 252
D CE L + F ALKK
Sbjct: 1216 DAHVACETHLGEAFLALKK 1234
>ref|XP_002263595.1| PREDICTED: DNA polymerase V-like [Vitis vinifera]
Length = 1280
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Frame = -2
Query: 476 SSKPDDSSYLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLTDPNLRALFLRALEP 297
+SK S+L KLG L+ L+ NMP+K +RR VRKFCGK+ Q+++ NL FL+ L P
Sbjct: 1199 ASKKMLKSHLPKLGLLIKVLVTNMPEKQARRTHVRKFCGKVFQMISTSNLTKSFLKDLPP 1258
Query: 296 D----CEVQLKDMFPALKK 252
D CE L + F ALKK
Sbjct: 1259 DAHVACETHLGEAFLALKK 1277
>emb|CAN80013.1| hypothetical protein VITISV_030078 [Vitis vinifera]
Length = 1395
Score = 72.0 bits (175), Expect = 8e-11
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Frame = -2
Query: 476 SSKPDDSSYLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLTDPNLRALFLRALEP 297
+SK S+L KLG L+ L+ NMP+K +RR VRKFCGK+ Q+++ NL FL+ L P
Sbjct: 1314 ASKKMLKSHLPKLGLLIKVLVTNMPEKQARRTHVRKFCGKVFQMISTSNLTKSFLKDLPP 1373
Query: 296 D----CEVQLKDMFPALKK 252
D CE L + F ALKK
Sbjct: 1374 DAHVACETHLGEAFLALKK 1392
>ref|XP_004292138.1| PREDICTED: DNA polymerase V-like [Fragaria vesca subsp. vesca]
Length = 1254
Score = 71.2 bits (173), Expect = 1e-10
Identities = 41/77 (53%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Frame = -2
Query: 455 SYLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLTDPNLRALFLRALEPD----CE 288
S+L KL L+ LL NMP+K SRRA+VRKFCGKI Q++ L FL+ L PD CE
Sbjct: 1178 SHLEKLCQLIEQLLTNMPEKQSRRAEVRKFCGKIFQMIATLKLSKSFLKNLAPDAHAKCE 1237
Query: 287 VQLKDMFPALKK*MLGE 237
QL D F LKK L E
Sbjct: 1238 SQLGDQFKNLKKIQLKE 1254
>ref|XP_002518323.1| DNA binding protein, putative [Ricinus communis]
gi|223542543|gb|EEF44083.1| DNA binding protein, putative
[Ricinus communis]
Length = 1229
Score = 66.6 bits (161), Expect = 3e-09
Identities = 41/93 (44%), Positives = 55/93 (59%), Gaps = 14/93 (15%)
Frame = -2
Query: 488 KSIVSSKPDDSS----------YLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLT 339
KS+VSS D+SS +L KL LV L+ NMP+ SRRA+VRKFC KI Q+++
Sbjct: 1130 KSMVSSSADESSRNATKKILKPHLQKLSYLVKELVMNMPENKSRRAEVRKFCIKIFQIMS 1189
Query: 338 DPNLRALFLRALEPD----CEVQLKDMFPALKK 252
+ FL+ L P+ CE QL ++F LKK
Sbjct: 1190 THDTAKSFLKDLTPETQAACESQLGELFLNLKK 1222
>ref|XP_006486780.1| PREDICTED: DNA polymerase V-like isoform X1 [Citrus sinensis]
gi|568866893|ref|XP_006486781.1| PREDICTED: DNA
polymerase V-like isoform X2 [Citrus sinensis]
Length = 1294
Score = 65.9 bits (159), Expect = 5e-09
Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Frame = -2
Query: 476 SSKPDDSSYLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLTDPNLRALFLRALEP 297
+SK S+L L ++ L+ NMP+K SRRA+VRKFC K+ Q+L+ NL FL+ L
Sbjct: 1214 ASKRKLKSHLRNLSHVIKQLVTNMPEKQSRRAEVRKFCAKMFQMLSTLNLTKPFLKDLPS 1273
Query: 296 D----CEVQLKDMFPALKK 252
D CE QL DMF LKK
Sbjct: 1274 DAHAACESQLGDMFLNLKK 1292
>ref|XP_006422655.1| hypothetical protein CICLE_v10027696mg [Citrus clementina]
gi|557524589|gb|ESR35895.1| hypothetical protein
CICLE_v10027696mg [Citrus clementina]
Length = 1222
Score = 65.9 bits (159), Expect = 5e-09
Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Frame = -2
Query: 476 SSKPDDSSYLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLTDPNLRALFLRALEP 297
+SK S+L L ++ L+ NMP+K SRRA+VRKFC K+ Q+L+ NL FL+ L
Sbjct: 1142 ASKRKLKSHLRNLSHVIKQLVTNMPEKQSRRAEVRKFCAKMFQMLSTLNLTKPFLKDLPS 1201
Query: 296 D----CEVQLKDMFPALKK 252
D CE QL DMF LKK
Sbjct: 1202 DAHAACESQLGDMFLNLKK 1220
>gb|EMJ02421.1| hypothetical protein PRUPE_ppa000330mg [Prunus persica]
Length = 1277
Score = 62.4 bits (150), Expect = 6e-08
Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Frame = -2
Query: 455 SYLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLTDPNLRALFLRALEPD----CE 288
S+L KL LV LL NMP+K SRRA+ RKFC +I+Q++T L FL+ L PD CE
Sbjct: 1202 SHLQKLCRLVEQLLTNMPEKQSRRAEARKFCIRILQMITTLKLTKSFLKNLAPDAHTKCE 1261
Query: 287 VQLKDMFPALKK 252
QL F +KK
Sbjct: 1262 SQLGGQFINMKK 1273
>ref|XP_002313953.2| hypothetical protein POPTR_0009s08340g [Populus trichocarpa]
gi|550331298|gb|EEE87908.2| hypothetical protein
POPTR_0009s08340g [Populus trichocarpa]
Length = 1298
Score = 62.0 bits (149), Expect = 8e-08
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 14/93 (15%)
Frame = -2
Query: 488 KSIVSSKPDDSS----------YLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLT 339
KS+VSS D+S+ +L KL L+ L NMP+K SRRA+ RKFCGK+ + ++
Sbjct: 1203 KSMVSSGNDESNRNASKKVLKNHLQKLSHLIKELATNMPEKPSRRAEARKFCGKVFRYVS 1262
Query: 338 DPNLRALFLRALEPD----CEVQLKDMFPALKK 252
+L FL+ L P+ CE QL +++ KK
Sbjct: 1263 TYDLTKSFLKYLAPEAEAACESQLGELYLNFKK 1295
>gb|EXC33021.1| DNA polymerase V [Morus notabilis]
Length = 1269
Score = 61.6 bits (148), Expect = 1e-07
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 4/72 (5%)
Frame = -2
Query: 455 SYLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLTDPNLRALFLRALEPD----CE 288
S+L+KL L+ L+ N +K SRRA+VRKFCGKI Q ++ L FL++L+ + CE
Sbjct: 1196 SHLSKLCHLIEVLVTNKAEKQSRRAEVRKFCGKIFQTVSTVKLAKAFLKSLDQNVHVLCE 1255
Query: 287 VQLKDMFPALKK 252
QL D F LKK
Sbjct: 1256 SQLGDQFLNLKK 1267
>ref|XP_002300310.2| hypothetical protein POPTR_0001s29220g [Populus trichocarpa]
gi|550348455|gb|EEE85115.2| hypothetical protein
POPTR_0001s29220g [Populus trichocarpa]
Length = 1283
Score = 58.5 bits (140), Expect = 9e-07
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 14/93 (15%)
Frame = -2
Query: 488 KSIVSSKPDDSS----------YLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLT 339
KS+V S D+S+ +L KL L+ L+ MP+K SRRA+VRKFCGK+ + ++
Sbjct: 1188 KSMVPSGNDESNRDASKKILKNHLQKLSHLIKELVTKMPEKQSRRAEVRKFCGKVFRYVS 1247
Query: 338 DPNLRALFLRALEPD----CEVQLKDMFPALKK 252
+L FL+ L P+ CE QL +++ K+
Sbjct: 1248 TYDLTKCFLKYLGPEAEAACESQLGELYLNFKE 1280
>gb|EOX98606.1| DNA polymerase phi subunit [Theobroma cacao]
Length = 1278
Score = 57.4 bits (137), Expect = 2e-06
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Frame = -2
Query: 476 SSKPDDSSYLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLTDPNLRALFLRALEP 297
+SK S+L L L+ L+ MP+K R+ +V KFC KI Q+++ +L FLR L P
Sbjct: 1198 ASKKILKSHLQSLSHLIERLVTRMPEKKLRKTEVHKFCDKIFQMISTLDLTEAFLRCLGP 1257
Query: 296 D----CEVQLKDMFPALKK 252
D CE QL +F LKK
Sbjct: 1258 DARPSCESQLGPLFLKLKK 1276
>ref|XP_002864901.1| DNA polymerase V family [Arabidopsis lyrata subsp. lyrata]
gi|297310736|gb|EFH41160.1| DNA polymerase V family
[Arabidopsis lyrata subsp. lyrata]
Length = 1301
Score = 56.2 bits (134), Expect = 4e-06
Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Frame = -2
Query: 473 SKPDDSSYLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLTDPNLRALFLRALEPD 294
SK ++L KL L+ L+ NMP+ RRA VRKFCG+I Q+++ L L+ L PD
Sbjct: 1221 SKKTMKTHLKKLIHLIKELVANMPEAKVRRAQVRKFCGRIFQMVSSLKLTNSLLKGLGPD 1280
Query: 293 ----CEVQLKDMFPALK 255
CE L D+F LK
Sbjct: 1281 GQSACESALGDLFLNLK 1297
>gb|ESW20324.1| hypothetical protein PHAVU_006G199700g [Phaseolus vulgaris]
Length = 1293
Score = 55.5 bits (132), Expect = 7e-06
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 12/91 (13%)
Frame = -2
Query: 488 KSIVSSKPDDS--------SYLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLTDP 333
KS+ S D+ S L KL L+ L N+P KA+RR +V KF K +++L+
Sbjct: 1200 KSLTSGNSDEQNASKKILKSSLDKLSRLMKELATNVPSKATRRTEVHKFYVKALEMLSKH 1259
Query: 332 NLRALFLRALEPD----CEVQLKDMFPALKK 252
NL FL+AL PD E QL D F LKK
Sbjct: 1260 NLTKHFLKALAPDTEAALEAQLGDQFITLKK 1290
>ref|XP_006279898.1| hypothetical protein CARUB_v10025747mg [Capsella rubella]
gi|482548602|gb|EOA12796.1| hypothetical protein
CARUB_v10025747mg [Capsella rubella]
Length = 1306
Score = 55.5 bits (132), Expect = 7e-06
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Frame = -2
Query: 473 SKPDDSSYLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLTDPNLRALFLRALEPD 294
SK ++L KL L+ L+ +P+ +RRA VRKFCG+I Q+++ L L+ L PD
Sbjct: 1226 SKKTMKTHLKKLSHLIKELVAKIPENKARRAQVRKFCGRIFQMVSSLKLTNSLLKGLGPD 1285
Query: 293 ----CEVQLKDMFPALK 255
CE L D+F LK
Sbjct: 1286 GQTACESALGDLFLNLK 1302
>ref|XP_003547107.1| PREDICTED: DNA polymerase V-like [Glycine max]
Length = 1262
Score = 55.5 bits (132), Expect = 7e-06
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Frame = -2
Query: 476 SSKPDDSSYLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLTDPNLRALFLRALEP 297
+SK + L KL L+ L+ NMP K +RR +V+KFC K +++L+ NL F++ L P
Sbjct: 1181 ASKKILKNSLDKLSHLLKELVTNMPSKPARRTEVQKFCVKALEILSKLNLTKNFVKTLAP 1240
Query: 296 D----CEVQLKDMFPALKK 252
D E QL + F +LKK
Sbjct: 1241 DTQAALEAQLGEQFISLKK 1259
>ref|XP_003593314.1| DNA polymerase V [Medicago truncatula] gi|355482362|gb|AES63565.1|
DNA polymerase V [Medicago truncatula]
Length = 1258
Score = 55.5 bits (132), Expect = 7e-06
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Frame = -2
Query: 476 SSKPDDSSYLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLTDPNLRALFLRALEP 297
SSK S L K+ + L+ NMP K +RRA+VRKFC K+ ++L+ +L L+ L P
Sbjct: 1177 SSKKIVKSNLDKISHAMKELVTNMPSKQARRAEVRKFCVKVFEILSKHSLTKYLLKTLAP 1236
Query: 296 DC----EVQLKDMFPALKK 252
+ E QL + F LKK
Sbjct: 1237 EAQAALEAQLGEKFLCLKK 1255
>gb|ABN05723.1| DNA polymerase V [Medicago truncatula]
Length = 1268
Score = 55.5 bits (132), Expect = 7e-06
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
Frame = -2
Query: 476 SSKPDDSSYLAKLGCLVNALLKNMPDKASRRADVRKFCGKIIQVLTDPNLRALFLRALEP 297
SSK S L K+ + L+ NMP K +RRA+VRKFC K+ ++L+ +L L+ L P
Sbjct: 1187 SSKKIVKSNLDKISHAMKELVTNMPSKQARRAEVRKFCVKVFEILSKHSLTKYLLKTLAP 1246
Query: 296 DC----EVQLKDMFPALKK 252
+ E QL + F LKK
Sbjct: 1247 EAQAALEAQLGEKFLCLKK 1265