BLASTX nr result

ID: Atropa21_contig00025200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atropa21_contig00025200
         (1596 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006360109.1| PREDICTED: glycine-rich RNA-binding protein ...    82   6e-13
ref|XP_004244175.1| PREDICTED: nucleolin-like isoform 2 [Solanum...    81   1e-12
ref|XP_004244174.1| PREDICTED: nucleolin-like isoform 1 [Solanum...    81   1e-12

>ref|XP_006360109.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
            [Solanum tuberosum]
          Length = 157

 Score = 82.0 bits (201), Expect = 6e-13
 Identities = 34/41 (82%), Positives = 36/41 (87%)
 Frame = +1

Query: 1228 FLDGWVIFAEYAKPRPPPPLMQNNNAVPGYGNYNSPTYGRQ 1350
            FLDGWVIFAEYA+PRPPPP MQNNN  PGYGNYNS +YG Q
Sbjct: 117  FLDGWVIFAEYARPRPPPPSMQNNNTTPGYGNYNSSSYGSQ 157


>ref|XP_004244175.1| PREDICTED: nucleolin-like isoform 2 [Solanum lycopersicum]
          Length = 138

 Score = 81.3 bits (199), Expect = 1e-12
 Identities = 34/41 (82%), Positives = 35/41 (85%)
 Frame = +1

Query: 1228 FLDGWVIFAEYAKPRPPPPLMQNNNAVPGYGNYNSPTYGRQ 1350
            FLDGWVIFAEYA+PRPPPP MQNNN  PGYGNYNS  YG Q
Sbjct: 98   FLDGWVIFAEYARPRPPPPSMQNNNTTPGYGNYNSSPYGSQ 138


>ref|XP_004244174.1| PREDICTED: nucleolin-like isoform 1 [Solanum lycopersicum]
          Length = 151

 Score = 81.3 bits (199), Expect = 1e-12
 Identities = 34/41 (82%), Positives = 35/41 (85%)
 Frame = +1

Query: 1228 FLDGWVIFAEYAKPRPPPPLMQNNNAVPGYGNYNSPTYGRQ 1350
            FLDGWVIFAEYA+PRPPPP MQNNN  PGYGNYNS  YG Q
Sbjct: 111  FLDGWVIFAEYARPRPPPPSMQNNNTTPGYGNYNSSPYGSQ 151


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