BLASTX nr result
ID: Atropa21_contig00025189
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00025189 (1366 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004245425.1| PREDICTED: B3 domain-containing transcriptio... 130 2e-27 ref|XP_004243797.1| PREDICTED: B3 domain-containing transcriptio... 130 2e-27 ref|XP_006357562.1| PREDICTED: B3 domain-containing transcriptio... 127 8e-27 ref|XP_004309082.1| PREDICTED: B3 domain-containing transcriptio... 58 8e-06 >ref|XP_004245425.1| PREDICTED: B3 domain-containing transcription factor VRN1-like [Solanum lycopersicum] Length = 296 Score = 130 bits (326), Expect = 2e-27 Identities = 59/86 (68%), Positives = 70/86 (81%), Gaps = 2/86 (2%) Frame = -2 Query: 261 EPCTYSYSSASFYVIIEPSVIDNRQLGMPD--T*EHGYELLETLKLIVLTDDFWCVGVKK 88 E C+ SYS+ SFYVI+EPSV+D+RQL +PD EHG ELL+T+K+IV TDDFWCVG+KK Sbjct: 2 ESCSNSYSAGSFYVIVEPSVMDDRQLRLPDKFVQEHGDELLDTVKIIVPTDDFWCVGLKK 61 Query: 87 AGKMIWLHDDWHEFTEHHSIGYWIFL 10 AGKMIWLHD W EF EHHS+ W FL Sbjct: 62 AGKMIWLHDGWQEFMEHHSVNCWYFL 87 >ref|XP_004243797.1| PREDICTED: B3 domain-containing transcription factor VRN1-like [Solanum lycopersicum] Length = 630 Score = 130 bits (326), Expect = 2e-27 Identities = 59/86 (68%), Positives = 70/86 (81%), Gaps = 2/86 (2%) Frame = -2 Query: 261 EPCTYSYSSASFYVIIEPSVIDNRQLGMPD--T*EHGYELLETLKLIVLTDDFWCVGVKK 88 E C+ SYS+ SFYVI+EPSV+D+RQL +PD EHG ELL+T+K+IV TDDFWCVG+KK Sbjct: 2 ESCSNSYSAGSFYVIVEPSVMDDRQLRLPDKFVREHGDELLDTVKIIVPTDDFWCVGLKK 61 Query: 87 AGKMIWLHDDWHEFTEHHSIGYWIFL 10 AGKMIWLHD W EF EHHS+ W FL Sbjct: 62 AGKMIWLHDGWQEFMEHHSVNCWYFL 87 >ref|XP_006357562.1| PREDICTED: B3 domain-containing transcription factor VRN1-like [Solanum tuberosum] Length = 584 Score = 127 bits (320), Expect = 8e-27 Identities = 59/88 (67%), Positives = 69/88 (78%), Gaps = 2/88 (2%) Frame = -2 Query: 267 MTEPCTYSYSSASFYVIIEPSVIDNRQLGMPD--T*EHGYELLETLKLIVLTDDFWCVGV 94 M E C+ SYS SFYVI++PSV+D+RQL +PD EHG ELL+T+K+IV T DFWCVGV Sbjct: 1 MMEACSNSYSVGSFYVIVDPSVMDDRQLRLPDKFVQEHGDELLDTVKIIVPTGDFWCVGV 60 Query: 93 KKAGKMIWLHDDWHEFTEHHSIGYWIFL 10 KKAGKMIWLHD W EF EHHS+ W FL Sbjct: 61 KKAGKMIWLHDGWQEFMEHHSVNCWYFL 88 >ref|XP_004309082.1| PREDICTED: B3 domain-containing transcription factor VRN1-like [Fragaria vesca subsp. vesca] Length = 461 Score = 58.2 bits (139), Expect = 8e-06 Identities = 31/75 (41%), Positives = 45/75 (60%), Gaps = 2/75 (2%) Frame = -2 Query: 246 SYSSASFYVIIEPSVIDNRQLGMPD--T*EHGYELLETLKLIVLTDDFWCVGVKKAGKMI 73 S S A+F+ +I S I+N++L +P E+G EL +IV D W VG+++A K I Sbjct: 8 SDSVANFFKVILSSTIENQKLDIPKKFALEYGEELSNGATVIVPAGDVWQVGLERAHKRI 67 Query: 72 WLHDDWHEFTEHHSI 28 W D W EF EH+S+ Sbjct: 68 WFVDGWPEFAEHYSL 82