BLASTX nr result
ID: Atropa21_contig00025106
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atropa21_contig00025106
(611 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation spec... 101 1e-19
ref|XP_006448162.1| hypothetical protein CICLE_v10015731mg [Citr... 101 1e-19
ref|XP_003630948.1| E3 ubiquitin-protein ligase [Medicago trunca... 100 2e-19
ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and... 99 1e-18
ref|XP_004498249.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 99 1e-18
ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation spec... 99 1e-18
gb|AFK39085.1| unknown [Lotus japonicus] 99 1e-18
ref|XP_006584880.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 98 2e-18
ref|XP_006583716.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 98 2e-18
gb|ESW25240.1| hypothetical protein PHAVU_003G019100g [Phaseolus... 98 2e-18
gb|ESW25239.1| hypothetical protein PHAVU_003G019100g [Phaseolus... 98 2e-18
ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 98 2e-18
ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-... 98 2e-18
ref|XP_002526000.1| cleavage and polyadenylation specificity fac... 98 2e-18
gb|ESW32424.1| hypothetical protein PHAVU_002G321300g [Phaseolus... 97 5e-18
gb|EMJ24509.1| hypothetical protein PRUPE_ppa007296mg [Prunus pe... 97 5e-18
ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261... 97 5e-18
ref|XP_002314782.2| hypothetical protein POPTR_0010s11660g [Popu... 96 6e-18
ref|XP_002312464.2| zinc finger family protein [Populus trichoca... 96 1e-17
gb|EOY01099.1| Zinc finger, C3HC4 type (RING finger) family prot... 95 1e-17
>ref|XP_006469322.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Citrus sinensis]
Length = 1019
Score = 101 bits (252), Expect = 1e-19
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YED TELHALPCNHHFHSTCI+KWLKMNATCPLCKYNILKGNEQV
Sbjct: 975 YEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 1019
>ref|XP_006448162.1| hypothetical protein CICLE_v10015731mg [Citrus clementina]
gi|557550773|gb|ESR61402.1| hypothetical protein
CICLE_v10015731mg [Citrus clementina]
Length = 359
Score = 101 bits (252), Expect = 1e-19
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YED TELHALPCNHHFHSTCI+KWLKMNATCPLCKYNILKGNEQV
Sbjct: 315 YEDGTELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 359
>ref|XP_003630948.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355524970|gb|AET05424.1| E3 ubiquitin-protein ligase
[Medicago truncatula]
Length = 336
Score = 100 bits (250), Expect = 2e-19
Identities = 42/45 (93%), Positives = 44/45 (97%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YEDE ELHALPCNHHFHSTCI+KWLKMNATCPLCK+NILKGNEQV
Sbjct: 292 YEDEAELHALPCNHHFHSTCIVKWLKMNATCPLCKFNILKGNEQV 336
>ref|XP_006355061.1| PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation
specificity factor subunit 3-II-like [Solanum tuberosum]
Length = 948
Score = 98.6 bits (244), Expect = 1e-18
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YED ELHALPCNHHFHSTCI+KWLKMNATCPLCKYNILKGN+QV
Sbjct: 904 YEDGAELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNDQV 948
>ref|XP_004498249.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cicer arietinum]
Length = 349
Score = 98.6 bits (244), Expect = 1e-18
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YED TELH LPCNHHFHS+CI+KWLKMNATCPLCKYNILKGNEQV
Sbjct: 305 YEDGTELHTLPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 349
>ref|XP_004237193.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
3-II-like [Solanum lycopersicum]
Length = 1043
Score = 98.6 bits (244), Expect = 1e-18
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YED ELHALPCNHHFHSTCI+KWLKMNATCPLCKYNILKGN+QV
Sbjct: 999 YEDGAELHALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNDQV 1043
>gb|AFK39085.1| unknown [Lotus japonicus]
Length = 89
Score = 98.6 bits (244), Expect = 1e-18
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YED ELH+LPCNHHFHSTCI+KWLKMNATCPLCKYNILKGNEQV
Sbjct: 45 YEDGAELHSLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 89
>ref|XP_006584880.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform X1
[Glycine max] gi|571469954|ref|XP_006584881.1|
PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform
X2 [Glycine max]
Length = 345
Score = 98.2 bits (243), Expect = 2e-18
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YED ELH LPCNHHFHSTCI+KWLKMNATCPLCKYNILKGNEQV
Sbjct: 301 YEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 345
>ref|XP_006583716.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform X1
[Glycine max] gi|571466652|ref|XP_006583717.1|
PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform
X2 [Glycine max]
Length = 356
Score = 98.2 bits (243), Expect = 2e-18
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YED ELHALPCNHHFHS+CI+KWLKMNATCPLCKYNILKGNEQV
Sbjct: 312 YEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 356
>gb|ESW25240.1| hypothetical protein PHAVU_003G019100g [Phaseolus vulgaris]
Length = 342
Score = 98.2 bits (243), Expect = 2e-18
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YED ELHALPCNHHFHS+CI+KWLKMNATCPLCKYNILKGNEQV
Sbjct: 298 YEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 342
>gb|ESW25239.1| hypothetical protein PHAVU_003G019100g [Phaseolus vulgaris]
Length = 271
Score = 98.2 bits (243), Expect = 2e-18
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YED ELHALPCNHHFHS+CI+KWLKMNATCPLCKYNILKGNEQV
Sbjct: 227 YEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 271
>ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 1 [Glycine
max]
Length = 344
Score = 98.2 bits (243), Expect = 2e-18
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YED ELH LPCNHHFHSTCI+KWLKMNATCPLCKYNILKGNEQV
Sbjct: 300 YEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 344
>ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 357
Score = 98.2 bits (243), Expect = 2e-18
Identities = 41/45 (91%), Positives = 43/45 (95%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YED ELHALPCNHHFHS+CI+KWLKMNATCPLCKYNILKGNEQV
Sbjct: 313 YEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGNEQV 357
>ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis] gi|223534732|gb|EEF36424.1| cleavage and
polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 98.2 bits (243), Expect = 2e-18
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YED ELH LPCNHHFHSTCI+KWLKMNATCPLCKYNILKGNEQV
Sbjct: 919 YEDGAELHTLPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNEQV 963
>gb|ESW32424.1| hypothetical protein PHAVU_002G321300g [Phaseolus vulgaris]
Length = 345
Score = 96.7 bits (239), Expect = 5e-18
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YED ELH LPCNHHFHSTCI+KWLKMNATCPLCK+NILKGNEQV
Sbjct: 301 YEDGAELHVLPCNHHFHSTCIVKWLKMNATCPLCKFNILKGNEQV 345
>gb|EMJ24509.1| hypothetical protein PRUPE_ppa007296mg [Prunus persica]
Length = 374
Score = 96.7 bits (239), Expect = 5e-18
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YED TELH LPCNHHFH+TCI+KWLKMNATCPLCKYNILKGNE V
Sbjct: 330 YEDGTELHTLPCNHHFHATCIVKWLKMNATCPLCKYNILKGNEPV 374
>ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 96.7 bits (239), Expect = 5e-18
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YED ELHALPCNHHFHSTCI KWLKMNATCPLCKYNILKG+EQ+
Sbjct: 2255 YEDGAELHALPCNHHFHSTCIAKWLKMNATCPLCKYNILKGSEQI 2299
>ref|XP_002314782.2| hypothetical protein POPTR_0010s11660g [Populus trichocarpa]
gi|550329589|gb|EEF00953.2| hypothetical protein
POPTR_0010s11660g [Populus trichocarpa]
Length = 327
Score = 96.3 bits (238), Expect = 6e-18
Identities = 40/45 (88%), Positives = 42/45 (93%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQV 476
YED ELHALPCNHHFH+ CI+KWLKMNATCPLCKYNILKGNEQV
Sbjct: 283 YEDGAELHALPCNHHFHAMCIVKWLKMNATCPLCKYNILKGNEQV 327
>ref|XP_002312464.2| zinc finger family protein [Populus trichocarpa]
gi|550332992|gb|EEE89831.2| zinc finger family protein
[Populus trichocarpa]
Length = 351
Score = 95.5 bits (236), Expect = 1e-17
Identities = 39/44 (88%), Positives = 42/44 (95%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQ 479
YED ELHALPCNHHFH+TCI+KWLKMNATCPLCK+NILKGNEQ
Sbjct: 307 YEDGAELHALPCNHHFHATCIVKWLKMNATCPLCKFNILKGNEQ 350
>gb|EOY01099.1| Zinc finger, C3HC4 type (RING finger) family protein isoform 1
[Theobroma cacao]
Length = 360
Score = 95.1 bits (235), Expect = 1e-17
Identities = 39/44 (88%), Positives = 41/44 (93%)
Frame = -2
Query: 610 YEDETELHALPCNHHFHSTCILKWLKMNATCPLCKYNILKGNEQ 479
YED +LHALPCNHHFHS CI+KWLKMNATCPLCKYNILKGNEQ
Sbjct: 317 YEDGADLHALPCNHHFHSACIVKWLKMNATCPLCKYNILKGNEQ 360