BLASTX nr result
ID: Atropa21_contig00025046
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atropa21_contig00025046 (763 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 152 1e-44 gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptas... 159 7e-43 ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256... 114 3e-35 ref|XP_004240821.1| PREDICTED: uncharacterized protein LOC101254... 95 1e-30 emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulga... 105 4e-29 gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] 115 7e-28 ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668... 99 7e-28 dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 116 2e-27 dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 116 2e-27 dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis ... 124 3e-26 emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-li... 109 3e-26 ref|XP_006598323.1| PREDICTED: uncharacterized protein LOC102660... 89 3e-26 dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like ... 108 5e-26 gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm,... 112 7e-26 gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00... 108 1e-25 ref|XP_004237698.1| PREDICTED: uncharacterized protein LOC101249... 116 1e-25 gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 91 2e-25 gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 91 2e-25 gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 92 4e-25 emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 92 4e-25 >emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1110 Score = 152 bits (385), Expect(2) = 1e-44 Identities = 89/238 (37%), Positives = 131/238 (55%), Gaps = 34/238 (14%) Frame = +3 Query: 150 KMLKAINC---TVLPKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQA 320 +M + INC T+LPK + ++++RPIACC V+YKII+K+L R++ +I V++E Q+ Sbjct: 489 RMHRPINCIVVTLLPKVQHATRVKEFRPIACCTVIYKIISKMLTNRMKGIIGEVVNEAQS 548 Query: 321 EFIPGKKVADNVILTHELVKGYNRKNVSPRCMI---------DR*WNVSNGELFHFG--- 464 FIPG+ +ADN++L EL++GY RK++SPRC++ W+ L+ FG Sbjct: 549 GFIPGRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPS 608 Query: 465 ---*W*AH*A----------------F*CCNGFKARRPISSLLFVVVMEYLSRNLADFKT 587 W F G + P+S LF + MEYLSR L + K Sbjct: 609 RFVGWIMECVSTVSYSVLVNGIPTQPFQARKGLRQGDPMSPFLFALCMEYLSRCLEELKG 668 Query: 588 VNTFKNHPKFKKLDIAHLSFLDDLLLFARGDQQSLSLLHEKFNIFTAASGLRENLNKS 761 F HPK ++L+I HL F DDLL+F R D+ SL ++ F F+ ASGL + KS Sbjct: 669 SPDFNFHPKCERLNITHLMFADDLLMFCRADKSSLDHMNVAFQKFSHASGLAASHEKS 726 Score = 54.7 bits (130), Expect(2) = 1e-44 Identities = 24/44 (54%), Positives = 34/44 (77%) Frame = +2 Query: 8 EILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFF 139 EI +AL IG+DKAP +D FNA+F+KK+W IK++I ++EFF Sbjct: 442 EIDEALAGIGNDKAPGLDGFNAYFFKKSWGSIKQEIYAGIQEFF 485 >gb|ABD33261.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago truncatula] Length = 402 Score = 159 bits (403), Expect(2) = 7e-43 Identities = 93/228 (40%), Positives = 135/228 (59%), Gaps = 34/228 (14%) Frame = +3 Query: 153 MLKAINCT---VLPKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQAE 323 M K INCT +LPK+ N +++++RPIACC V+YKII+KIL R+Q V++SV+SE Q+ Sbjct: 173 MPKIINCTYMTLLPKEVNVTSVKNFRPIACCSVIYKIISKILTSRMQGVLNSVVSENQSA 232 Query: 324 FIPGKKVADNVILTHELVKGYNRKNVSPRCMI----DR*WN-----------VSNGELFH 458 F+ G+ + DN+IL+HELVK Y+RK +SPRCM+ + +N + G + Sbjct: 233 FVKGRVIFDNIILSHELVKSYSRKGISPRCMVKIDLQKAYNSVEWPFIKHLMLELGFSYK 292 Query: 459 FG*W----------------*AH*AF*CCNGFKARRPISSLLFVVVMEYLSRNLADFKTV 590 F W F G + PIS LFV+ MEYL+ L + Sbjct: 293 FVNWVMGCLTTASYTFNINGDLTRPFAAKKGLRQGDPISPYLFVICMEYLNICLIQLRKN 352 Query: 591 NTFKNHPKFKKLDIAHLSFLDDLLLFARGDQQSLSLLHEKFNIFTAAS 734 F+ HP+ K+L++ H+ F+DDLLLF+RGD S+S L E F++F+AAS Sbjct: 353 AAFRFHPRCKRLNLIHVCFVDDLLLFSRGDVDSVSQLFEAFSLFSAAS 400 Score = 41.6 bits (96), Expect(2) = 7e-43 Identities = 15/46 (32%), Positives = 29/46 (63%) Frame = +2 Query: 8 EILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFFAT 145 E+ + L S+ KAP +D +N F+K +W++I + + + + +FF T Sbjct: 125 EVKNVLFSMDSSKAPGIDGYNVHFFKCSWNIIGDSVIDAILDFFKT 170 >ref|XP_004247247.1| PREDICTED: uncharacterized protein LOC101256917 [Solanum lycopersicum] Length = 421 Score = 114 bits (286), Expect(2) = 3e-35 Identities = 71/208 (34%), Positives = 111/208 (53%), Gaps = 4/208 (1%) Frame = +3 Query: 150 KMLKAINCTV---LPKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQA 320 K+ K NCT+ +PK +P N+++YR I CC VLYKII+K++ R+ VI +VI ++Q Sbjct: 157 KLFKPFNCTLVSLIPKVQSPKNVKEYRTITCCTVLYKIISKVITNRMHDVIHNVICDSQV 216 Query: 321 EFIPGKKVADNVILTHELVKGYNRKNVSPRCMIDR*WNVSNGELFHFG*W*AH*AF*CCN 500 FI G+K+++N++L HELV Y RKN+SPR M+ + +++ W Sbjct: 217 GFILGRKISENILLAHELVNSYTRKNISPRSML----KIDLQKVYDSVEWPF-------- 264 Query: 501 GFKARRPISSLLFVVVMEYLSRNLADFKTVNTFKNHPKFKKLDIAHLSF-LDDLLLFARG 677 ++ + L F + + N ++ D A L + ++LLLF+RG Sbjct: 265 ---LKQVMVGLGFPDMFTQWVMHCVKTVNYTIVVNGQTTQRFDAARLFYCYNNLLLFSRG 321 Query: 678 DQQSLSLLHEKFNIFTAASGLRENLNKS 761 D S+ L F F+ ASG + NLNKS Sbjct: 322 DLNSIKALKGCFLEFSQASGQQANLNKS 349 Score = 61.2 bits (147), Expect(2) = 3e-35 Identities = 27/50 (54%), Positives = 36/50 (72%) Frame = +2 Query: 2 DKEILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFFATEK 151 +++I AL SIG+DKAP +D +NAFF+K W +IK DI EVV+ FF K Sbjct: 108 EEKIFAALQSIGNDKAPGIDGYNAFFFKYTWKIIKNDIIEVVQSFFKPGK 157 >ref|XP_004240821.1| PREDICTED: uncharacterized protein LOC101254905 [Solanum lycopersicum] Length = 224 Score = 94.7 bits (234), Expect(2) = 1e-30 Identities = 44/93 (47%), Positives = 67/93 (72%), Gaps = 3/93 (3%) Frame = +3 Query: 150 KMLKAINCTVL---PKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQA 320 KM K NCT++ PK +P +++YR IACC +L +II+K++ +R+ +VI +V+ ++QA Sbjct: 125 KMCKPFNCTLVSLFPKVQSPKTVKEYRAIACCTILCQIISKVITKRMHEVIHTVVCDSQA 184 Query: 321 EFIPGKKVADNVILTHELVKGYNRKNVSPRCMI 419 PG+K+AD +IL HEL K Y RKN+SPR M+ Sbjct: 185 --APGRKIADYIILAHELGKAYTRKNISPRSML 215 Score = 65.9 bits (159), Expect(2) = 1e-30 Identities = 28/50 (56%), Positives = 37/50 (74%) Frame = +2 Query: 2 DKEILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFFATEK 151 ++EI AL SIG+DKAP +D +NAFF+K W +IK+D+ E VK FF T K Sbjct: 76 EQEIYTALQSIGNDKAPGIDGYNAFFFKHTWKIIKKDVIEAVKRFFTTGK 125 >emb|CCA65981.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1114 Score = 105 bits (262), Expect(2) = 4e-29 Identities = 81/241 (33%), Positives = 115/241 (47%), Gaps = 38/241 (15%) Frame = +3 Query: 153 MLKAINCT---VLPKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQA- 320 M K INCT ++PK + +DYRPIACC LYKII+KIL +R+Q VI+ V+ Q Sbjct: 493 MHKPINCTAVTLIPKIDEAKHAKDYRPIACCSTLYKIISKILTKRLQAVITEVVDCAQTG 552 Query: 321 ---------------EFIPG---KKVADNVILTHELVKGYNR----------KNVSPRCM 416 E I G + V+ ++ ++ K Y+ K + M Sbjct: 553 FIPERHIGDNILLATELIRGYNRRHVSPRCVIKVDIRKAYDSVEWVFLESMLKELGFPSM 612 Query: 417 IDR*W------NVSNGELFHFG*W*AH*AF*CCNGFKARRPISSLLFVVVMEYLSRNLAD 578 R W VS L + F G + P+S LF + MEYLSR + + Sbjct: 613 FIR-WIMACVKTVSYSILLN---GIPSIPFDAQKGLRQGDPLSPFLFALSMEYLSRCMGN 668 Query: 579 FKTVNTFKNHPKFKKLDIAHLSFLDDLLLFARGDQQSLSLLHEKFNIFTAASGLRENLNK 758 F HPK +++ + HL F DDLL+FAR D S+S + FN F+ ASGL+ ++ K Sbjct: 669 MCKDPEFNFHPKCERIKLTHLMFADDLLMFARADASSISKIMAAFNSFSKASGLQASIEK 728 Query: 759 S 761 S Sbjct: 729 S 729 Score = 49.7 bits (117), Expect(2) = 4e-29 Identities = 23/45 (51%), Positives = 32/45 (71%) Frame = +2 Query: 5 KEILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFF 139 +EI AL I D KAP +D FN+ F+KK+W VIK++I E + +FF Sbjct: 444 QEIDQALADIDDTKAPGLDGFNSVFFKKSWLVIKQEIYEGILDFF 488 >gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana] Length = 872 Score = 115 bits (289), Expect(2) = 7e-28 Identities = 84/244 (34%), Positives = 126/244 (51%), Gaps = 35/244 (14%) Frame = +3 Query: 135 SLLQKKML-KAINCTVL---PKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSV 302 S QK L K IN +L PK +RDYRPI+CC VLYK+I+KI+A R++ ++ Sbjct: 145 SFFQKGFLPKGINSIILALIPKKLAAKEMRDYRPISCCNVLYKVISKIIANRLKLLLPRF 204 Query: 303 ISETQAEFIPGKKVADNVILTHELVKGYNRKNVSPRCMI---------DR*WNVSNGEL- 452 I+E Q+ F+ + + +N++L ELVK Y++ ++S RC I W+ L Sbjct: 205 IAENQSAFVKDRLLIENLLLATELVKDYHKDSISARCAIKIDISKAFDSVQWSFLTNTLV 264 Query: 453 -FHFG*W*AH*AF*C---------CNG-----FKARR------PISSLLFVVVMEYLSRN 569 +F H C NG F+++R +S LFV+ M+ LS+ Sbjct: 265 AMNFSPTFIHWINLCITTASFSVQVNGDLVGYFQSKRGLRQGCSLSPYLFVICMDVLSKM 324 Query: 570 LADFKTVNTFKNHPKFKKLDIAHLSFLDDLLLFARGDQQSLSLLHEKFNIFTAASGLREN 749 L V F HPK ++L + HLSF DDL++ + G +S+ + E F+ F SGLR + Sbjct: 325 LDKAAGVRKFGFHPKCQRLGLTHLSFADDLMVLSDGKTRSIEGILEVFDEFCKRSGLRIS 384 Query: 750 LNKS 761 L KS Sbjct: 385 LEKS 388 Score = 35.0 bits (79), Expect(2) = 7e-28 Identities = 16/45 (35%), Positives = 25/45 (55%) Frame = +2 Query: 5 KEILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFF 139 +EI L S+ DK+P D + + FYK W +I ++ V+ FF Sbjct: 103 EEIKTVLFSMPKDKSPGPDGYTSEFYKATWDIIGQEFTLPVQSFF 147 >ref|XP_006599894.1| PREDICTED: uncharacterized protein LOC102668020 [Glycine max] Length = 603 Score = 98.6 bits (244), Expect(2) = 7e-28 Identities = 66/207 (31%), Positives = 100/207 (48%), Gaps = 3/207 (1%) Frame = +3 Query: 150 KMLKAINCTVL---PKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQA 320 K+LK +N ++ PK + +RPI+CC +LYKI++KILA RI V+ ++I ETQ Sbjct: 312 KILKQLNHAIIALIPKHDQASQVNHFRPISCCNLLYKIVSKILANRIAPVLETIIGETQT 371 Query: 321 EFIPGKKVADNVILTHELVKGYNRKNVSPRCMIDR*WNVSNGELFHFG*W*AH*AF*CCN 500 FI KK+ DN+ L E+++ Y K SPRC++ + Sbjct: 372 AFIKNKKMMDNIFLIQEILRKYAWKRSSPRCLLK------------------------ID 407 Query: 501 GFKARRPISSLLFVVVMEYLSRNLADFKTVNTFKNHPKFKKLDIAHLSFLDDLLLFARGD 680 KA IS E+L L + F + ++HL+F DD++L +RGD Sbjct: 408 LHKAYDSIS-------WEFLDWMLKSIGFLTQF-------CIQLSHLAFADDIMLLSRGD 453 Query: 681 QQSLSLLHEKFNIFTAASGLRENLNKS 761 S+S + K F SGL + +KS Sbjct: 454 IPSVSTMFAKLQHFCRVSGLSISSDKS 480 Score = 52.4 bits (124), Expect(2) = 7e-28 Identities = 22/49 (44%), Positives = 34/49 (69%) Frame = +2 Query: 5 KEILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFFATEK 151 +E+ + ++ + ++KAP D FN F+KKAW++I +DI E V EFF T K Sbjct: 264 QEVWNVISVMDNNKAPGPDGFNVLFFKKAWNIIGDDIFEAVNEFFTTGK 312 >dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis thaliana] Length = 1072 Score = 116 bits (290), Expect(2) = 2e-27 Identities = 80/246 (32%), Positives = 117/246 (47%), Gaps = 42/246 (17%) Frame = +3 Query: 150 KMLKAINCTVL---PKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQA 320 ++LK N T L PK SN I ++RPI+C LYK+I+K+L R+Q ++S+VI +Q+ Sbjct: 358 QLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQS 417 Query: 321 EFIPGKKVADNVILTHELVKGYNRKNVSPR------------------------------ 410 F+PG+ +A+NV+L E+V GYNR N+SPR Sbjct: 418 AFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPE 477 Query: 411 --------CMIDR*WNVS-NGELFHFG*W*AH*AF*CCNGFKARRPISSLLFVVVMEYLS 563 C+ + +S NG F F G + P+S LFV+ ME S Sbjct: 478 RYINWIHQCITTPSFTISVNGATGGF--------FRSTKGLRQGDPLSPYLFVLAMEVFS 529 Query: 564 RNLADFKTVNTFKNHPKFKKLDIAHLSFLDDLLLFARGDQQSLSLLHEKFNIFTAASGLR 743 + L HPK L I+HL F DD+++F G S+ + E + F SGL+ Sbjct: 530 KLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLK 589 Query: 744 ENLNKS 761 N +KS Sbjct: 590 VNKDKS 595 Score = 33.1 bits (74), Expect(2) = 2e-27 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = +2 Query: 2 DKEILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFF 139 D EI A S+ +K D ++ F++ WS+I ++ + EFF Sbjct: 309 DDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFF 354 >dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] Length = 1072 Score = 116 bits (290), Expect(2) = 2e-27 Identities = 80/246 (32%), Positives = 117/246 (47%), Gaps = 42/246 (17%) Frame = +3 Query: 150 KMLKAINCTVL---PKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQA 320 ++LK N T L PK SN I ++RPI+C LYK+I+K+L R+Q ++S+VI +Q+ Sbjct: 358 QLLKQWNATTLVLIPKTSNACTISEFRPISCLNTLYKVISKLLTSRLQGLLSAVIGHSQS 417 Query: 321 EFIPGKKVADNVILTHELVKGYNRKNVSPR------------------------------ 410 F+PG+ +A+NV+L E+V GYNR N+SPR Sbjct: 418 AFLPGRSLAENVLLATEMVHGYNRLNISPRGMLKVDLKKAFDSVKWEFVTAALRALAIPE 477 Query: 411 --------CMIDR*WNVS-NGELFHFG*W*AH*AF*CCNGFKARRPISSLLFVVVMEYLS 563 C+ + +S NG F F G + P+S LFV+ ME S Sbjct: 478 RYINWIHQCITTPSFTISVNGATGGF--------FRSTKGLRQGDPLSPYLFVLAMEVFS 529 Query: 564 RNLADFKTVNTFKNHPKFKKLDIAHLSFLDDLLLFARGDQQSLSLLHEKFNIFTAASGLR 743 + L HPK L I+HL F DD+++F G S+ + E + F SGL+ Sbjct: 530 KLLYSRYDSGYIHYHPKAGDLSISHLMFADDVMIFFDGGSSSMHGICETLDDFADWSGLK 589 Query: 744 ENLNKS 761 N +KS Sbjct: 590 VNKDKS 595 Score = 33.1 bits (74), Expect(2) = 2e-27 Identities = 14/46 (30%), Positives = 24/46 (52%) Frame = +2 Query: 2 DKEILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFF 139 D EI A S+ +K D ++ F++ WS+I ++ + EFF Sbjct: 309 DDEIKAAFKSLPRNKTSGPDGYSVEFFRDTWSIIGPEVLAAIHEFF 354 >dbj|BAB01344.1| reverse transcriptase-like protein [Arabidopsis thaliana] Length = 1115 Score = 124 bits (312), Expect = 3e-26 Identities = 73/204 (35%), Positives = 110/204 (53%), Gaps = 3/204 (1%) Frame = +3 Query: 159 KAINCTVL---PKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQAEFI 329 K +N T+L PK +RDYRPI+CC VLYK+I+KI+A R+++++ IS Q+ F+ Sbjct: 472 KGVNSTILALIPKKKESKEMRDYRPISCCNVLYKVISKIIANRLKRILPKFISGNQSAFV 531 Query: 330 PGKKVADNVILTHELVKGYNRKNVSPRCMIDR*WNVSNGELFHFG*W*AH*AF*CCNGFK 509 + + +NV+L ELVK Y++ + S + NGEL + F G + Sbjct: 532 KDRLLIENVLLATELVKDYHKTSFSVQV---------NGELAGY--------FRSARGIR 574 Query: 510 ARRPISSLLFVVVMEYLSRNLADFKTVNTFKNHPKFKKLDIAHLSFLDDLLLFARGDQQS 689 +S LFV+ ME LS+ L F HPK K L + HL F DDL++ G +S Sbjct: 575 QGCALSPYLFVISMEVLSKMLDQAAGAKRFGFHPKCKNLGLTHLCFADDLMILTDGKVRS 634 Query: 690 LSLLHEKFNIFTAASGLRENLNKS 761 + + E N+F SGL+ N+ K+ Sbjct: 635 VDGIVEVMNLFAKRSGLKINMEKT 658 >emb|CAA66812.1| non-ltr retrotransposon reverse transcriptase-like protein [Arabidopsis thaliana] Length = 893 Score = 109 bits (273), Expect(2) = 3e-26 Identities = 80/242 (33%), Positives = 119/242 (49%), Gaps = 38/242 (15%) Frame = +3 Query: 150 KMLKAINCTVL---PKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQA 320 ++LK N T L PK +N + D+RPI+C LYK+I K+L R++K+++ VIS +Q+ Sbjct: 499 QLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQS 558 Query: 321 EFIPGKKVADNVILTHELVKGYNRKNVSPRCMIDR*WNVSNGELFHFG*W---------- 470 F+PG+ +++NV+L E+V GYN KN+S R M+ V + F W Sbjct: 559 AFLPGRLLSENVLLATEIVHGYNTKNISSRGML----KVDLRKAFDSVRWDFIISAFRAL 614 Query: 471 *AH*AF*C--------------CNG-----FKARR------PISSLLFVVVMEYLSRNLA 575 F C NG FK+ + P+S LFV+ ME S L Sbjct: 615 AVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLK 674 Query: 576 DFKTVNTFKNHPKFKKLDIAHLSFLDDLLLFARGDQQSLSLLHEKFNIFTAASGLRENLN 755 + HPK L I+HL F DD+++F G SL + E + F + SGL N + Sbjct: 675 ARFDAGYIQYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASWSGLHVNKD 734 Query: 756 KS 761 K+ Sbjct: 735 KT 736 Score = 35.8 bits (81), Expect(2) = 3e-26 Identities = 16/46 (34%), Positives = 28/46 (60%) Frame = +2 Query: 2 DKEILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFF 139 D +I +A S+ +KA D +++ F+K W V+ ++ E V+EFF Sbjct: 450 DLDIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFF 495 >ref|XP_006598323.1| PREDICTED: uncharacterized protein LOC102660513 [Glycine max] Length = 543 Score = 89.0 bits (219), Expect(2) = 3e-26 Identities = 37/85 (43%), Positives = 61/85 (71%), Gaps = 3/85 (3%) Frame = +3 Query: 150 KMLKAINCTV---LPKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQA 320 KM + IN ++ +PK+ RDYRPI+CC +YK+I+K+L R+ +VI S++ ++QA Sbjct: 459 KMYEPINTSLVILIPKNQEAKYARDYRPISCCTTIYKVISKVLTTRLSRVIKSIVHQSQA 518 Query: 321 EFIPGKKVADNVILTHELVKGYNRK 395 F+PG+K+ D ++L +EL++GY RK Sbjct: 519 AFVPGQKIHDQILLAYELIQGYERK 543 Score = 56.6 bits (135), Expect(2) = 3e-26 Identities = 26/50 (52%), Positives = 34/50 (68%) Frame = +2 Query: 2 DKEILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFFATEK 151 D+EI AL SIGD KAP +D + A F+K AWS+IK D + ++EFF K Sbjct: 410 DEEIDKALKSIGDLKAPGIDGYGAKFFKDAWSIIKSDFTDAIREFFEKGK 459 >dbj|BAB01845.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis thaliana] Length = 893 Score = 108 bits (271), Expect(2) = 5e-26 Identities = 80/242 (33%), Positives = 118/242 (48%), Gaps = 38/242 (15%) Frame = +3 Query: 150 KMLKAINCTVL---PKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQA 320 ++LK N T L PK +N + D+RPI+C LYK+I K+L R++K+++ VIS +Q+ Sbjct: 499 QLLKQWNATTLVLIPKITNSSKMTDFRPISCLNTLYKVIAKLLTSRLKKLLNEVISPSQS 558 Query: 321 EFIPGKKVADNVILTHELVKGYNRKNVSPRCMIDR*WNVSNGELFHFG*W---------- 470 F+PG+ +++NV+L E+V GYN KN+S R M+ V + F W Sbjct: 559 AFLPGRLLSENVLLATEIVHGYNTKNISSRGML----KVDLRKAFDSVRWDFIISAFRAL 614 Query: 471 *AH*AF*C--------------CNG-----FKARR------PISSLLFVVVMEYLSRNLA 575 F C NG FK+ + P+S LFV+ ME S L Sbjct: 615 AVPEKFVCWINQCISTPYFSVMVNGSSSGFFKSNKGLRQGDPLSPYLFVLAMEVFSSLLK 674 Query: 576 DFKTVNTFKNHPKFKKLDIAHLSFLDDLLLFARGDQQSLSLLHEKFNIFTAASGLRENLN 755 HPK L I+HL F DD+++F G SL + E + F + SGL N + Sbjct: 675 ARFDAGYIHYHPKTADLSISHLMFADDVMVFFDGGSSSLHGISEALDDFASWSGLHVNKD 734 Query: 756 KS 761 K+ Sbjct: 735 KT 736 Score = 35.8 bits (81), Expect(2) = 5e-26 Identities = 16/46 (34%), Positives = 28/46 (60%) Frame = +2 Query: 2 DKEILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFF 139 D +I +A S+ +KA D +++ F+K W V+ ++ E V+EFF Sbjct: 450 DLDIQEAFFSLPRNKASGPDGYSSEFFKGVWFVVGPEVTEAVQEFF 495 >gb|AAC28221.1| similar to reverse transcriptases (PFam: rvt.hmm, score: 60.13) [Arabidopsis thaliana] Length = 1164 Score = 112 bits (279), Expect(2) = 7e-26 Identities = 75/239 (31%), Positives = 112/239 (46%), Gaps = 35/239 (14%) Frame = +3 Query: 150 KMLKAINCTVLPKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQAEFI 329 K A N ++PK +N ++ D+RPI+C +YK+I+K+L R++ + + IS +Q+ F+ Sbjct: 398 KQWNATNLVLIPKITNASSMSDFRPISCLNTVYKVISKLLTDRLKDFLPAAISHSQSAFM 457 Query: 330 PGKKVADNVILTHELVKGYNRKNVSPRCMIDR*WNVSNGELFHFG*W------------- 470 PG+ +NV+L ELV GYN+KN++P M+ V + F W Sbjct: 458 PGRLFLENVLLATELVHGYNKKNIAPSSML----KVDLRKAFDSVRWDFIVSALRALNVP 513 Query: 471 --------------------*AH*A--F*CCNGFKARRPISSLLFVVVMEYLSRNLADFK 584 H A F G + P+S LFV+ ME S L Sbjct: 514 EKFTCWILECLSTASFSVILNGHSAGHFWSSKGLRQGDPMSPYLFVLAMEVFSGLLQSRY 573 Query: 585 TVNTFKNHPKFKKLDIAHLSFLDDLLLFARGDQQSLSLLHEKFNIFTAASGLRENLNKS 761 T HPK +L+I+HL F DD+++F G SL + E F SGL N NK+ Sbjct: 574 TSGYIAYHPKTSQLEISHLMFADDVMIFFDGKSSSLHGIVESLEDFAGWSGLLMNTNKT 632 Score = 32.3 bits (72), Expect(2) = 7e-26 Identities = 15/49 (30%), Positives = 27/49 (55%) Frame = +2 Query: 5 KEILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFFATEK 151 ++I +A S+ +KA D F+ F+ W +I ++ E + EFF + K Sbjct: 347 EQIKNAFFSLPRNKASGPDGFSPEFFCACWPIIGGEVTEAIHEFFTSGK 395 >gb|AAD21699.1| Contains reverse transcriptase domain (rvt) PF|00078 [Arabidopsis thaliana] Length = 1253 Score = 108 bits (270), Expect(2) = 1e-25 Identities = 84/241 (34%), Positives = 115/241 (47%), Gaps = 38/241 (15%) Frame = +3 Query: 153 MLKAINCTVL---PKDSNPYNIRDYRPIACC----IVLYKIITKILARRIQKVISSVISE 311 +LK N T L PK +N + D+RPI+C I LYK+I ++L R+Q ++S VIS Sbjct: 448 LLKQWNATTLVLIPKITNASKMNDFRPISCNDFGPITLYKVIARLLTNRLQCLLSQVISP 507 Query: 312 TQAEFIPGKKVADNVILTHELVKGYNRKNVSPRCMI---------DR*WNVSNGELFHFG 464 Q+ F+PG+ +A+NV+L ELV+GYNR+N+ PR M+ W+ L G Sbjct: 508 FQSAFLPGRFLAENVLLATELVQGYNRQNIDPRGMLKVDLRKAFDSIRWDFIISALKAIG 567 Query: 465 ------*W*AH*A-----F*CCNG-----FKARR------PISSLLFVVVMEYLSRNLAD 578 W C NG FK+ R P+S LFV+ ME S L Sbjct: 568 IPDRFVYWITQCISTPTFSVCVNGNTGGFFKSTRGLRQGNPLSPFLFVLAMEVFSSLLNS 627 Query: 579 FKTVNTFKNHPKFKKLDIAHLSFLDDLLLFARGDQQSLSLLHEKFNIFTAASGLRENLNK 758 HPK L I+HL F DD+++F G SL + E F SGL N K Sbjct: 628 RFQAGYIHYHPKTSPLSISHLMFADDIMVFFDGGSSSLHGISEALEDFAFWSGLVLNREK 687 Query: 759 S 761 + Sbjct: 688 T 688 Score = 34.7 bits (78), Expect(2) = 1e-25 Identities = 16/47 (34%), Positives = 25/47 (53%) Frame = +2 Query: 5 KEILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFFAT 145 ++I A S +K D F F+K+ WSVI ++ + V EFF + Sbjct: 399 QDIKSAFFSFPSNKTSGPDGFPVEFFKETWSVIGTEVTDAVSEFFTS 445 >ref|XP_004237698.1| PREDICTED: uncharacterized protein LOC101249454 [Solanum lycopersicum] Length = 225 Score = 116 bits (290), Expect(2) = 1e-25 Identities = 52/93 (55%), Positives = 71/93 (76%), Gaps = 3/93 (3%) Frame = +3 Query: 150 KMLKAINCTV---LPKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQA 320 K+ KA NCT+ +PK NP +++YR IACC VLY II+K+L R+ VI S+I ++QA Sbjct: 129 KLHKAFNCTLVSFIPKAQNPETVKEYRTIACCTVLYNIISKVLTNRLHSVIQSIICDSQA 188 Query: 321 EFIPGKKVADNVILTHELVKGYNRKNVSPRCMI 419 FIPG+K+ADN++LTHELVK Y RK++SPR M+ Sbjct: 189 GFIPGRKIADNIVLTHELVKAYTRKHISPRSML 221 Score = 26.9 bits (58), Expect(2) = 1e-25 Identities = 11/17 (64%), Positives = 14/17 (82%) Frame = +2 Query: 2 DKEILDALNSIGDDKAP 52 ++EI D L SIG+DKAP Sbjct: 111 EQEIYDGLKSIGNDKAP 127 >gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1750 Score = 91.3 bits (225), Expect(2) = 2e-25 Identities = 71/244 (29%), Positives = 111/244 (45%), Gaps = 39/244 (15%) Frame = +3 Query: 147 KKMLKAINCTVLPKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQAEF 326 K + N ++PK +NP + DYRPIA C VLYK+I+K L R++ ++S++S++QA F Sbjct: 863 KPSINHTNICMIPKITNPTTLSDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAF 922 Query: 327 IPGKKVADNVILTHELVKGYN-RKNVSPRCM---------IDR-*WNVSNGELFHFG--- 464 IPG+ + DNV++ HE++ RK VS M DR W+ + FG Sbjct: 923 IPGRIINDNVMIAHEVMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCN 982 Query: 465 *W*A-------------------H*AF*CCNGFKARRPISSLLFVVVMEYLSR------N 569 W H G + P+S LF++ + LS + Sbjct: 983 KWIGWIMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRAS 1042 Query: 570 LADFKTVNTFKNHPKFKKLDIAHLSFLDDLLLFARGDQQSLSLLHEKFNIFTAASGLREN 749 D + V P I HL F DD L F + + ++ L + F+++ SG + N Sbjct: 1043 SGDLRGVRIGNGAPA-----ITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKIN 1097 Query: 750 LNKS 761 + KS Sbjct: 1098 VQKS 1101 Score = 51.6 bits (122), Expect(2) = 2e-25 Identities = 24/48 (50%), Positives = 29/48 (60%) Frame = +2 Query: 2 DKEILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFFAT 145 D EI DA+ IGDDKAP D A FYK W ++ D+ VK+FF T Sbjct: 812 DTEIYDAICQIGDDKAPGPDGLTARFYKNCWDIVGYDVILEVKKFFET 859 >gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis thaliana] Length = 1524 Score = 91.3 bits (225), Expect(2) = 2e-25 Identities = 71/244 (29%), Positives = 111/244 (45%), Gaps = 39/244 (15%) Frame = +3 Query: 147 KKMLKAINCTVLPKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQAEF 326 K + N ++PK +NP + DYRPIA C VLYK+I+K L R++ ++S++S++QA F Sbjct: 637 KPSINHTNICMIPKITNPTTLSDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAF 696 Query: 327 IPGKKVADNVILTHELVKGYN-RKNVSPRCM---------IDR-*WNVSNGELFHFG--- 464 IPG+ + DNV++ HE++ RK VS M DR W+ + FG Sbjct: 697 IPGRIINDNVMIAHEVMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCN 756 Query: 465 *W*A-------------------H*AF*CCNGFKARRPISSLLFVVVMEYLSR------N 569 W H G + P+S LF++ + LS + Sbjct: 757 KWIGWIMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRAS 816 Query: 570 LADFKTVNTFKNHPKFKKLDIAHLSFLDDLLLFARGDQQSLSLLHEKFNIFTAASGLREN 749 D + V P I HL F DD L F + + ++ L + F+++ SG + N Sbjct: 817 SGDLRGVRIGNGAPA-----ITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKIN 871 Query: 750 LNKS 761 + KS Sbjct: 872 VQKS 875 Score = 51.6 bits (122), Expect(2) = 2e-25 Identities = 24/48 (50%), Positives = 29/48 (60%) Frame = +2 Query: 2 DKEILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFFAT 145 D EI DA+ IGDDKAP D A FYK W ++ D+ VK+FF T Sbjct: 586 DTEIYDAICQIGDDKAPGPDGLTARFYKNCWDIVGYDVILEVKKFFET 633 >gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score: 42.57) [Arabidopsis thaliana] Length = 1662 Score = 92.4 bits (228), Expect(2) = 4e-25 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 39/244 (15%) Frame = +3 Query: 147 KKMLKAINCTVLPKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQAEF 326 K+ + N ++PK +NP + DYRPIA C VLYKII+K L R++ + +++S++QA F Sbjct: 863 KQSINHTNICMIPKITNPETLSDYRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAF 922 Query: 327 IPGKKVADNVILTHELVKGY-NRKNVSPRCM---------IDR-*WNVSNGELFHFG--- 464 IPG+ V DNV++ HE++ RK VS M DR WN + FG Sbjct: 923 IPGRLVNDNVMIAHEMMHSLKTRKRVSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGFSE 982 Query: 465 *W-------------------*AH*AF*CCNGFKARRPISSLLFVV---VMEYLSRNL-- 572 W H G + P+S LF++ ++ +L +N Sbjct: 983 TWIKWIMGAVKSVNYSVLVNGIPHGTIQPQRGIRQGDPLSPYLFILCADILNHLIKNRVA 1042 Query: 573 -ADFKTVNTFKNHPKFKKLDIAHLSFLDDLLLFARGDQQSLSLLHEKFNIFTAASGLREN 749 D + + P + HL F DD L F + + ++ L + F+++ SG + N Sbjct: 1043 EGDIRGIRIGNGVP-----GVTHLQFADDSLFFCQSNVRNCQALKDVFDVYEYYSGQKIN 1097 Query: 750 LNKS 761 ++KS Sbjct: 1098 MSKS 1101 Score = 49.3 bits (116), Expect(2) = 4e-25 Identities = 23/48 (47%), Positives = 29/48 (60%) Frame = +2 Query: 2 DKEILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFFAT 145 D EI +A+ IGDDKAP D A FYK W ++ D+ + VK FF T Sbjct: 812 DLEIYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRT 859 >emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1| putative protein [Arabidopsis thaliana] Length = 1294 Score = 92.4 bits (228), Expect(2) = 4e-25 Identities = 71/244 (29%), Positives = 114/244 (46%), Gaps = 39/244 (15%) Frame = +3 Query: 147 KKMLKAINCTVLPKDSNPYNIRDYRPIACCIVLYKIITKILARRIQKVISSVISETQAEF 326 K+ + N ++PK +NP + DYRPIA C VLYKII+K L R++ + +++S++QA F Sbjct: 843 KQSINHTNICMIPKITNPETLSDYRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAF 902 Query: 327 IPGKKVADNVILTHELVKGY-NRKNVSPRCM---------IDR-*WNVSNGELFHFG--- 464 IPG+ V DNV++ HE++ RK VS M DR WN + FG Sbjct: 903 IPGRLVNDNVMIAHEMMHSLKTRKRVSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGFSE 962 Query: 465 *W-------------------*AH*AF*CCNGFKARRPISSLLFVV---VMEYLSRNL-- 572 W H G + P+S LF++ ++ +L +N Sbjct: 963 TWIKWIMGAVKSVNYSVLVNGIPHGTIQPQRGIRQGDPLSPYLFILCADILNHLIKNRVA 1022 Query: 573 -ADFKTVNTFKNHPKFKKLDIAHLSFLDDLLLFARGDQQSLSLLHEKFNIFTAASGLREN 749 D + + P + HL F DD L F + + ++ L + F+++ SG + N Sbjct: 1023 EGDIRGIRIGNGVP-----GVTHLQFADDSLFFCQSNVRNCQALKDVFDVYEYYSGQKIN 1077 Query: 750 LNKS 761 ++KS Sbjct: 1078 MSKS 1081 Score = 49.3 bits (116), Expect(2) = 4e-25 Identities = 23/48 (47%), Positives = 29/48 (60%) Frame = +2 Query: 2 DKEILDALNSIGDDKAPRVDDFNAFFYKKAWSVIKEDICEVVKEFFAT 145 D EI +A+ IGDDKAP D A FYK W ++ D+ + VK FF T Sbjct: 792 DLEIYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRT 839